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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6451#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1371 fasta sequence
[CATCCATCCTCTGCCACAGGTCCTCTTCTCATGGTGATTGCTCAACACTCTTCCCACTATCAATAAATGCAGCTGTCTGTCTTCTGTCGTTCTAACGTGTTTTGTTGTGCTCTTTTGCTTACAGTAAAAGGTGCTGTCACGAGGATTTTAAAGTACATCATACATATTGTCGTATAGAAAAAAACATGTGTCGTGTATTTTAACGCAACACAACCGTGCCACCCGCGCCACAAACTCTGTTGCTTAACTAAGCGCGTTGTGTGTCGCGTCTTATATTCTGTGTACAAAACTTGGAAGGAAGCTCTAGGAGATGTAAAGTTTACACAGTTTCTTCTTCGCGTGCATTTCCGATGCGGATAGTGTAGTGAAGGAATTGTAAAAAAGGCGCGCTACACACGCTGGTGGCTCTCACCAAAAACGTATTAAATGATCCATCTGCACTCTCACTCTCTTGGTTAGCCAGCCAAAAAAAAACAATGATTCTCTCTCAATAATGTCGTCATCCGTTTCCGGA-GTTGTCTTCCCTTTATAAACCGGTACACAACTTTGTTTGGCACTAGAAAGAGGACGTTATAATATTCGTGCGCTCACAGAGCGTTACAGAGTCAGTGTTTCGAACACATTCATTCCTATTTACCCCCCAACTCTCCCAACGACGCCACATCTACATCTTCGTTTCGTGCGATATTCTTTCGCAGCTATAATACAACACTTTAAAACAACCACCCCCTCTTCCCCTCTGTCCCCTTCTGACCTTCTGAATCCTTCGTATGAATCCTGAATGAGCGCGTTTGTGTCTGTGCTTTATCCATACACAAAACAAACAAACAATTCCTCTCCCCTCCCCCTCCTCCTT-AAGGCACAGAGTTGGTCGCGATCGCGATCGGCCAGGTGACCGGGCCCTTCATCACGATATCGGCCAGGCTTTGCTTAATCTTAATGAACCGCCGTTTAAACTCCAGCCCGCAGCCCTTCGACAGCCGAAAGTCGCACAGGATCTTACCATCCATCTCGACGATGTTCGCCTTAAAGATCAGCTGCAGCTTCCGCCGATCGATCGTCGATATCGTAATCACGCCCTCGTCGTTCGATTTCCAGCCGTAGCCAAGCTTTTCCAGCACGGCCGATAACCGTTTCAGCGTTTCGTCGCAGCGCGCCGACACGAAGAAGCGGGTCATGCGCCGGACCAGGCGTTGGAACGGATTCTGCTGCTGCTGCTGCGTGCCAACGCTCTGCGTCGGGGTTGAGCTGCGTGCAGAGGATCAGATCGTCCAGCATGGTTGGCTGCGAGAAGCAGAACCCGTTCCGGGCCTCGATCGCTTCCTCCACACCGTTCATCTCGGTGTGCACGGTCATTGGGACGGGTTGCGA]
[-] EMBL BX620952 [CATCCATCCTCTGCCACAGGTCCTCTTCTCATGGTGATTGCTCAACACTCTTCCCACTATCAATAAATGCAGCTGTCTGTCTTCTGTCGTTCTAACGTGTTTTGTTGTGCTCTTTTGCTTACAGTAAAAGGTGCTGTCACGAGGATTTTAAAGTACATCATACATATTGTCGTATAGAAAAAAACATGTGTCGTGTATTTTAACGCAACACAACCGTGCCACCCGCGCCACAAACTCTGTTGCTTAACTAAGCGCGTTGTGTGTCGCGTCTTATATTCTGTGTACAAAACTTGGAAGGAAGCTCTAGGAGATGTAAAGTTTACACAGTTTCTTCTTCGCGTGCATTTCCGATGCGGATAGTGTAGTGAAGGAATTGTAAAAAAGGCGCGCTACACACGCTGGTGGCTCTCACCAAAAACGTATTAAATGATCCATCTGCACTCTCACTCTCTTGGTTAGCCAGCCAAAAAAAAACAATGATTCTCTCTCAATAATGTCGTCATCCGTTTCCGGATGTTGTCTTCCCTTTATAAACCGGTACACAATTTTGTTTGGCACTAGAAAGAGGACGTTATAATATTCGTGCGCTCACAGA ]
[+] EMBL CNS08W7D [ CGTTTCCGGA GTTGTCTTCCCTTTATAAACCGGTACACAACTTTGTTTGGCACTAGAAAGAGGACGTTATAATATTCGTGCGCTCACAGAGCGTTACAGAGTCAGTGTTTCGAACACATTCATTCCTATTTACCCCCCAACTCTCCCAACGACGCCACATCTACATCTTCGTTTCGTGCGATATTCTTTCGCAGCTATAATACAACACTTTAAAACAACCACCC ]
[+] EMBL CNS08UQI [ TTTCCGGA GTTGTCTTCCCTTTATAAACCGGTACACAACTTTGTTTGGCACTAGAAAGAGGACGTTATAATATTCGTGCGCTCACAGAGCGTTACAGAGTCAGTGTTTCGAACACATTCATTCCTATTTACCCCCCAACTCTCCCAACGACGCCACAACTACATCTTCGTTTCGTGCGATATTCTTTCGCAGCTATAATACAACACTTTAAAACAACTATCCCCTCTTCCCCTCTGTCCCCTTCTGACCTTCTGAATCCTTCGTATGAATCCTGAATGAGCGCGTTTGTGTCTGTGCTTTATCCATACACAAAACAAACAAACAATTCCTCTCCCCTCCCCCTCCTCCTT AAGGCACAGAGTTGGTCGCGATCGCGATCGGCCAGGTGACCGGGCCCTTCATCACGATATCGGCCAGGCTTTGCTTAATCTTAATGAACCGCCGTTTAAACTCCAGCCCGCAGCCCTTCGACAGCCGAAAGTCGCACAGGATCTTACCATCCATCTCGACGATGTTCGCCTTAAAGATCAGCTGCAGCTTCCGCCGATCGATCGTCGATATCGTAATCACGCCCTCGTCGTTCGATTTCCAGCCGTAGCCAAGCTTTTCCAGCACGGCCGATAACCGTTTCAGCGTTTCGTCGCAGCGCGCCGACACGAAGAAGCGGGTCATGCGCCGGACCAGGCGTTGGAACGGATTCTGCTGCTGCTGCTGCGTGCCAACGCTCTGCGTCGGGGTTGAGCTGCGTGCAGAGGATCAGATCGTCCAGCATGGTTGGCTGCGAGAAGCAGAACCCGTTCCGGGCCTCGATCGCTTCCTCCACACCGTTCATCTCGGTGTGCACGGTCATTGGGACGGGTTGCGA]
[-] EMBL BM598128 [ CGTTTGTGTCTGTGTTTTATCCACACACAA GAACAAATAATTCGTCTCCCCTCCCCCTCCTCCTTAAAGGCACAGAGTTGGTCGCGATCGCGATCGGCCAGGTGACCGGGCCCTTCATCACGATATCGGCCAGGCTTTGCTTAATCTTAATGAACCGCCGTTTAAACTCCAGCCCGCAGCCCTTCGACAGCCGAAAGTCGCACAGGATCTTACCATCCATCTCGACGATGTTCGCCTTAAAGATCAGCTGCAGCTTCCGCCGATCGATCGTCGATATCGTAATCACGCCCTCGTCGTTCGATTTCCAGCCGTAGCCAAGCTTTTCCAGCACGGCCGATAACCGTTTCAGCGTTTCGTCGCAGCGCGTCGACACGAAGAAGCGGGTCATGCGCCGGACCAGGCGTTGGAACGGATTCTGCTGCTGCTGCTGCGTGCCAACGCTCTGCGTC GGGTTGAGCTGCGTGCAGAGGATCAGATCGTCCAGCATGGTTGGCTGCGAGAAGCcgg ]
consensusID : consensus_6451#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 701 fasta sequence
[GGTCCTCTCATGGTGATTGCTCAACACTCTTCCCACTATCAATAAATGCAGCTGTCTGTCTTCTGTCGTTCTAACGTGTTTTGTTGTGCTCTTTTGCTTACAGTAAAAGGTGCTGTCACGAGGATTTTAAAGTACATCATACATATTGTCGTATAGAAAAAAACATGTGTCGTGTATTTTAACGCAACACAACCGTGCCACCCTCGCCACAAACTCTGTTGCTTAACTAAGCCGCGTTGTGTGTCGCGTCTTATATTCTGTGTACAAAAATTGGAAGGAAGCTCTAGGAGATGTAAAGTTTACACAGTTTCTTCTTCGCGTGCATTTCGATGCGGATAGTGTAGTGAAGGAATTGTAAAAAAGGCGCGCTACACACGCTGGTGGCTCTCACCAAAAACGTATTAAATGATCCATCTGCACTCTCACTCTCTGTGTTAGCCAGCCAAAAAAAACAATGATTCTCAATAATGTCGGTCATCCGTTTCCGGATGTTGTCTTCCCTTTATAAACCGGTACACAACTTTGTTTGGCACTAGAAAGAGGACGTTATAATATTCGTGCGCTCACAGAGCGTATCAGAGTCAGTGTTTCGAACACATTCATTCCTATTTACCCATCAACTCTCCCAACCACACCACATCTACATCTTCGTTTCGTGTGATATTCTTTCGCAGCTATAATACAACCGGACGCGTGGGCGG]
[-] EMBL BM605223 [GGTCCTCTCATGGTGATTGCTCAACACTCTTCCCACTATCAATAAATGCAGCTGTCTGTCTTCTGTCGTTCTAACGTGTTTTGTTGTGCTCTTTTGCTTACAGTAAAAGGTGCTGTCACGAGGATTTTAAAGTACATCATACATATTGTCGTATAGAAAAAAACATGTGTCGTGTATTTTAACGCAACACAACCGTGCCACCCTCGCCACAAACTCTGTTGCTTAACTAAGCCGCGTTGTGTGTCGCGTCTTATATTCTGTGTACAAAAATTGGAAGGAAGCTCTAGGAGATGTAAAGTTTACACAGTTTCTTCTTCGCGTGCATTTCGATGCGGATAGTGTAGTGAAGGAATTGTAAAAAAGGCGCGCTACACACGCTGGTGGCTCTCACCAAAAACGTATTAAATGATCCATCTGCACTCTCACTCTCTGTGTTAGCCAGCCAAAAAAAACAATGATTCTCAATAATGTCGGTCATCCGTTTCCGGATGTTGTCTTCCCTTTATAAACCGGTACACAACTTTGTTTGGCACTAGAAAGAGGACGTTATAATATTCGTGCGCTCACAGAGCGTATCAGAGTCAGTGTTTCGAACACATTCATTCCTATTTACCCATCAACTCTCCCAACCACACCACATCTACATCTTCGTTTCGTGTGATATTCTTTCGCAGCTATAATACAACCGGACGCGTGGGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6451#0 CATCCATCCTCTGCCACAGGTCCTCTTCTCATGGTGATTGCTCAACACTCTTCCCACTAT 60
consensus_6451#1 ---------------------GGTCCTCTCATGGTGATTGCTCAACACTCTTCCCACTAT 39
** **********************************
consensus_6451#0 CAATAAATGCAGCTGTCTGTCTTCTGTCGTTCTAACGTGTTTTGTTGTGCTCTTTTGCTT 120
consensus_6451#1 CAATAAATGCAGCTGTCTGTCTTCTGTCGTTCTAACGTGTTTTGTTGTGCTCTTTTGCTT 99
************************************************************
consensus_6451#0 ACAGTAAAAGGTGCTGTCACGAGGATTTTAAAGTACATCATACATATTGTCGTATAGAAA 180
consensus_6451#1 ACAGTAAAAGGTGCTGTCACGAGGATTTTAAAGTACATCATACATATTGTCGTATAGAAA 159
************************************************************
consensus_6451#0 AAAACATGTGTCGTGTATTTTAACGCAACACAACCGTGCCACCCGCGCCACAAACTCTGT 240
consensus_6451#1 AAAACATGTGTCGTGTATTTTAACGCAACACAACCGTGCCACCCTCGCCACAAACTCTGT 219
******************************************** ***************
consensus_6451#0 TGCTTAACTAAGC-GCGTTGTGTGTCGCGTCTTATATTCTGTGTACAAAACTTGGAAGGA 299
consensus_6451#1 TGCTTAACTAAGCCGCGTTGTGTGTCGCGTCTTATATTCTGTGTACAAAAATTGGAAGGA 279
************* ************************************ *********
consensus_6451#0 AGCTCTAGGAGATGTAAAGTTTACACAGTTTCTTCTTCGCGTGCATTTCCGATGCGGATA 359
consensus_6451#1 AGCTCTAGGAGATGTAAAGTTTACACAGTTTCTTCTTCGCGTGCATTTC-GATGCGGATA 338
************************************************* **********
consensus_6451#0 GTGTAGTGAAGGAATTGTAAAAAAGGCGCGCTACACACGCTGGTGGCTCTCACCAAAAAC 419
consensus_6451#1 GTGTAGTGAAGGAATTGTAAAAAAGGCGCGCTACACACGCTGGTGGCTCTCACCAAAAAC 398
************************************************************
consensus_6451#0 GTATTAAATGATCCATCTGCACTCTCACTCTCTTGGTTAGCCAGCCAAAAAAAAACAATG 479
consensus_6451#1 GTATTAAATGATCCATCTGCACTCTCACTCTCTGTGTTAGCCAGCCAAAAAAAA-CAATG 457
********************************* ******************* *****
consensus_6451#0 ATTCTCTCTCAATAATGTCG-TCATCCGTTTCCGGA-GTTGTCTTCCCTTTATAAACCGG 537
consensus_6451#1 ATTCTC----AATAATGTCGGTCATCCGTTTCCGGATGTTGTCTTCCCTTTATAAACCGG 513
****** ********** *************** ***********************
consensus_6451#0 TACACAACTTTGTTTGGCACTAGAAAGAGGACGTTATAATATTCGTGCGCTCACAGAGCG 597
consensus_6451#1 TACACAACTTTGTTTGGCACTAGAAAGAGGACGTTATAATATTCGTGCGCTCACAGAGCG 573
************************************************************
consensus_6451#0 TTACAGAGTCAGTGTTTCGAACACATTCATTCCTATTTACCCCCCAACTCTCCCAACGAC 657
consensus_6451#1 TATCAGAGTCAGTGTTTCGAACACATTCATTCCTATTTACCCATCAACTCTCCCAACCAC 633
* *************************************** ************* **
consensus_6451#0 GCCACATCTACATCTTCGTTTCGTGCGATATTCTTTCGCAGCTATAATACAACACTTTAA 717
consensus_6451#1 ACCACATCTACATCTTCGTTTCGTGTGATATTCTTTCGCAGCTATAATACAACCGGACGC 693
************************ ***************************
consensus_6451#0 AACAACCACCCCCTCTTCCCCTCTGTCCCCTTCTGACCTTCTGAATCCTTCGTATGAATC 777
consensus_6451#1 GTGGGCGG---------------------------------------------------- 701
*
consensus_6451#0 CTGAATGAGCGCGTTTGTGTCTGTGCTTTATCCATACACAAAACAAACAAACAATTCCTC 837
consensus_6451#1 ------------------------------------------------------------
consensus_6451#0 TCCCCTCCCCCTCCTCCTTAAGGCACAGAGTTGGTCGCGATCGCGATCGGCCAGGTGACC 897
consensus_6451#1 ------------------------------------------------------------
consensus_6451#0 GGGCCCTTCATCACGATATCGGCCAGGCTTTGCTTAATCTTAATGAACCGCCGTTTAAAC 957
consensus_6451#1 ------------------------------------------------------------
consensus_6451#0 TCCAGCCCGCAGCCCTTCGACAGCCGAAAGTCGCACAGGATCTTACCATCCATCTCGACG 1017
consensus_6451#1 ------------------------------------------------------------
consensus_6451#0 ATGTTCGCCTTAAAGATCAGCTGCAGCTTCCGCCGATCGATCGTCGATATCGTAATCACG 1077
consensus_6451#1 ------------------------------------------------------------
consensus_6451#0 CCCTCGTCGTTCGATTTCCAGCCGTAGCCAAGCTTTTCCAGCACGGCCGATAACCGTTTC 1137
consensus_6451#1 ------------------------------------------------------------
consensus_6451#0 AGCGTTTCGTCGCAGCGCGCCGACACGAAGAAGCGGGTCATGCGCCGGACCAGGCGTTGG 1197
consensus_6451#1 ------------------------------------------------------------
consensus_6451#0 AACGGATTCTGCTGCTGCTGCTGCGTGCCAACGCTCTGCGTCGGGGTTGAGCTGCGTGCA 1257
consensus_6451#1 ------------------------------------------------------------
consensus_6451#0 GAGGATCAGATCGTCCAGCATGGTTGGCTGCGAGAAGCAGAACCCGTTCCGGGCCTCGAT 1317
consensus_6451#1 ------------------------------------------------------------
consensus_6451#0 CGCTTCCTCCACACCGTTCATCTCGGTGTGCACGGTCATTGGGACGGGTTGCGA 1371
consensus_6451#1 ------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||