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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6541#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2130 fasta sequence
[CCGATGGACTTTTAGGAGCATCCGGTTGCGGTAAAACGACACTTCTATCGTGCATAGTAGGACGAAAGCGACTAAACTCAGGAGAAATATGGGTCCTCGGTGGAAAGCCGGGAACGAAAGGATCCGGTGTCCCTGGAGCCCGCGTAGGATACATGCCGCAGGAGATTGCTCTGTACGGTGAATTCTCGATCCGCGAAACGATGATGTACTTCGGCTGGATCTTTGGCATGCACACGTCCGAGATCGTCGAGCGATTACAGTTTCTGCTCAACTTTCTCGATCTGCCATCAGAGTCTCGGTTGGTGAAGAATTTGAGTGGTGGCCAACAGCGTCGTGTATCGTTCGCCGTGGCCCTGATGCACGACCCGGAGCTGCTCATTCTCGACGAACCGACCGTCGGTGTGGATCCACTACTTAGACAAAGTATATGGAATCATCTGGTACACATCACCAAGGCCGGCCAGAAAACCGTCATCATTACGACGCACTACATCGAGGAAGCCCGACAAGCACACACGATCGGTCTGATGCGATCGGGTCGACTGCTGGCGGAAGAGTCACCGAGCTGCTTGCTGTCGATGTATCGCTGCAGCAGCCCTGGAAGGATGTCTTTCCTGAAGCTGTCACGCAAACAGGGCCAAGCCAATGTGGCACCAGCTGAGCTGAACATCAGCAACAACATATCAC-TGTCGGCGCTGGCATTCGGCAACAAAAAGGACAACCCAGTCTACGTCAGCCAGGAAAGTGGTGTCGTCGGACTTAACTTCCACCAGAGCAAGGAGGTGCTCATCAGTGACAGTAACGGATCCACCATTGCTATCAATGGACTCAATGGATCTGCTCCCGGTGCGATCAGTCAAGCGGTCGAGTGCGATAACTGCACCGAATGTTCGGGTTGTTCCAACTTTACGTCGAAGGGAAAGATCCGTGCCCTGCTGGTGAAGAACTTCCTGCGCATGTGGCGAAACGTGGGCGTGATGCTGTTCATCTTCGCCCTGCCCGTCATGCAGGTGATCCTGTTCTGTCTGGCGATCGGGCGTGATCCTACTAACCTGAAAATGGCCATCGTTAACGGTGAGATGAACTCGACCATCGGGGCGGACTGTGCGTTCGATCCGGGGTGCAGCTTTACCAACCTATCCTGTCGCTACCTGAGCCACCTCAACACGACGATCGTGAAGGAATACTACTCGGACCTGGACTCGGCGCTCGGTGCGGTGCGGGACGGCAACGCTTGGGGCGCACTGTACTTTACGGACAACTTTACCGATGCACTTGTGGCGCGTATCGCTCTCGGACGCGATGCTGACGACGAGACGCTGGACCAGTCGGAAATTCGCGTGTGGCTCGACATGTCCAACCAGCAGATCGGCATCATGCTGAACCGCGACCTGCAGGTCGCGTATCGGGAGTTTGCCCAGCAGCTGCTGCGAGTGTGCGACAACAATCCGAAGCTTGGCGATGTTCCGATCCAGTTCAAGGCTCCGATCTACGGTACCAACGATCCGTCGTTCACTGATTTCGTCGCACCAGGAGTCATTTTGACTATCGTGTTCTTCCTGGCCGTGGCACTGACGTCCTCCGCGCTGATCATCGAGCGTACCGAGGGTTTGCTGGATCGATCGTGGGTTGCCGGTGTGACGCCGAGCGAAATCCTGTTCTCGCACGTCATCACCCAGTTCGTGGTGATGTGCGGNCAGACCGCGCTCGTGCTGATCTTCATGATCGTGGTGGTCNGCGTGACGAACAACGGCGAGATCNGCTGGATCGTGGTGCTGACCATCCTGCAGGGTCTGTGCGGTATGTGCTTCGGGTTCGTCATTTCGGCCATCTGCGAGCTGGAGCGCAACGCTATCCAGCTCGCCCTCGGGTCGTTCTACCCGACGCTGCTGCTGTCCGGCGTGATCTGGCCGATCGAGGGCATGCCGCTCGTGCTGCGGTACGTTTCGCTCTGCCTGCCACTGACGCTGGCCACCACGTCCCTCCGCTCGATACTGGCCCGCGGCTGGAGCATAATGGAGCCGGACGTGTATATGGGCTTCGTTTCGACGATCGCCTGGATTGCGCTGTTCCTCGTCATCACGATGCTGGTGCTGAAGTTCAAGCGCGGCTAAGCGGCGCGAGGCAAGC]
[+] EMBL BM611282 [CCGATGGACTTTTAGGAGCATCCGGTTGCGGTAAAACGACACTTCTATCGTGCATAGTAGGACGAAAGCGACTAAACTCAGGAGAAATATGGGTCCTCGGTGGAAAGCCGGGAACGAAAGGATCCGGTGTCCCTGGAGCCCGCGTAGGATACATGCCGCAGGAGATTGCTCTGTACGGTGAATTCTCGATCCGCGAAACGATGATGTACTTCGGCTGGATCTTTGGCATGCACACGTCCGAGATCGTCGAGCGATTACAGTTTCTGCTCAACTTTCTCGATCTGCCATCAGAGTCTCGGTTGGTGAAGAATTTGAGTGGTGGCCAACAGCGTCGTGTATCGTTCGCCGTGGCCCTGATGCACGACCCGGAGCTGCTCATTCTCGACGAACCGACCGTCGGTGTGGATCCACTACTTAGACAAAGTATATGGAATCATCTGGTACACATCACCAAGGCCGGCCAGAAAACCGTCATCATTACGACGCACTACATCGAGGAAGCCCGACAAGCACACACGATCGGTCTGATGCGATCGGGTCGACTGCTGGCGGAAGAGTCACCGAGCTGCTTGCTGTCGATGTATCGCTGCAGCAGCCCTGGAAGGATGTCTTTCCTGAAGCTGTCACGCAAACAGGGCCAAGCCAATGTGGCACCAGCTGAGCTGAACATCAGCAACAACATATCACTTGTCG ]
[+] EMBL BM631094 [ CCGAGCCAATGTGGCACCAGCTGAGCTGAACATCAGCAACAACATATCAC TGTCGGCGCTGGCATTCGGCAACAAAAAGGACAACCCAGTCTACGTCAGCCAGGAAAGTGGTGTCGTCGGACTTAACTTCCACCAGAGCAAGGAGGTGCTCATCAGTGACAGTAACGGATCCACCATTGCTATCAATGGACTCAATGGATCTGCTCCCGGTGCGATCAGTCAAGCGGTCGAGTGCGATAACTGCACCGAATGTTCGGGTTGTTCCAACTTTACGTCGAAGGGAAAGATCCGTGCCCTGCTGGTGAAGAACTTCCTGCGCATGTGGCGAAACGTGGGCGTGATGCTGTTCATCTTCGCCCTGCCCGTCATGCAGGTGATCCTGTTCTGTCTGGCGATCGGGCGTGATCCTACTAACCTGAAAATGGCCATCGTTAACGGTGAGATGAACTCGACCATCGGGGCGGACTGTGCGTTCGATCCGGGGTGCAGCTTTACCAACCTATCCTGTCGCTACCTGAGC ]
[+] EMBL BX624477 [ CTTCGCCCTGCCCGTCATGCAGGTGATCCTGTTCTGTCTGGCGATCGGGCGTGATCCTACCAACCTGAAAATGGCCATCGTTAACGGTGAGATGAACTCGACCATCGGGGCGGACTGTGCGTTCGATCCGGGGTGCAGCTTTACCAACCTATCCTGTCGCTACCTGAGCCACCTCAACACGACGATCGTGAAGGAATACTACTCGGACCTGGACTCGGCGCTCGGTGCGGTGCGGGACGGCAACGCTTGGGGCGCACTGTACTTTACGGACAACTTTACCGATGCACTTGTGGCGCGTATCGCTCTCGGACGCGATGCTGACGACGAGACGCTGGACCAGTCGGAAATTCGCGTGTGGCTCGACATGTCCAACCAGCAGATCGGCATCATGCTGAACCGCGACCTGCAGGTCGCGTATCGGGAGTTTGCCCAGCAGCTGCTGCGAGTGTGCGACAACAATCCGAAGCTTGGCGATGTTCCGATCCAGTTCAAGGCTCCGATCTACGGTACCAACGATCCGTCGTTCACTGATTTCGTCGCACCAGGAGTCATTTTGACTATCGTGTTCTTCCTGGCCGTGGCACTGACGTCCTCCGCGCTGATCATCGAGCGTACCGAGGGTTTGCTGGATCGATCGTGGGTTGCCGGTGTGACGCCGAGCGAAATCCTGTTCTCGCACGTCATCACCCAGTTCGTGGTGATGTGCGGNCAGACCGCGCTCGTGCTGATCTTCATGATCGTGGTGGTCNGCGTGACGAACAACGGCGAGATCNGCTGGATCGTGGTGCTGACCATC ]
[+] EMBL BM634678 [ ccgCCAGGAGTCATTTTGACTATCGTGTTCTTCCTGGCCGTGGCACTGACGTCCTCCGCGCTGATCATCGAGCGTACCGAGGGTTTGCTGGATCGATCGTGGGTTGCCGGTGTGACGCCGAGCGAAATCCTGTTCTCGCACGTCATCACCCAGTTCGTGGTGATGTGCGGCCAGACCGCGCTCGTGCTGATCTTCATGATCGTGGTGTTCGGCGTGACGAACAACGGCGAGATCGGCTGGATCGTGGTGCTGACCATCCTGCAGGGTCTGTGCGGTATGTGCTTCGGGTTCGTCATTTCGGCCATCTGCGAGCTGGAGCGCAACGCTATCCAGCTCGCCCTCGGGTCGTTCTACCCGACGCTGCTGCTGTCCGGCGTGATCTGGCCGATCGAGGGCATGCCGCTCGTGCTGCGGTACGTTTCGCTCTGCCTGCCACTGACGCTGGCCACCACGTCCCTCCGCTCGATACTGGCCCGCGGCTGGAGCATAATGGAGCCGGACGTGTATATGGGCTTCGTTTCGACGATCGCCTGGATTGCGCTGTTCCTCGTCATCACGATGCTGGTGCTGAAGTTCAAGCGCGGCTAAGCGGCGCGAGGCAAGC]
consensusID : consensus_6541#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 637 fasta sequence
[CCGCCCACGCGTCCGGTCCAACCAGCAGATCGGCATCATGCTGAACCGCGACCTGCAGGTCGCGTATCGGGAGTTTGCCCAGCAGCTGCTGCGAGTTTGCGACAACAATCCGAAGCTTGGCGATGTTCCGATCCAGTTCAAGGCTCCGATCTACGGTACCAACGATCCGTCGTTCACTGATTTCGTCGCACCAGGAGTCATTTTGACTATCGTGTTCTTCCTGGCCGTGGCACTGACGTCCTCCGCGCTGATCATCGAGCGTACCGAGGGTTTGCTGGATCGATCGTGGGTTGCCGGTGTGACGCCGAGCGAAATCCTGTTCTCGCACGTCATCACCCAGTTCGTGGTGATGTGCGGCCAGACCGCGCTCGTGCTGATCTTCATGATCGTGGTGTTCGGCGTGACGAACAACGGCGAGATCGGCTGGATCGTGGTGCTGACCATCCTGCAGGGTCTGTGCGGTATGTGCTTCGGGTTCGTCATTTCGGCCATCTGCGAGCTGGAGCGCAACGCTATCCAGCTCGCCCTCGGGTCGTTCTACCCGACGCTGCTGCTGTCCGGCGTGATCTGGCCGATCGAGGGCATGCCGCTCGTGCTGCGGTACGTTTCGCTCTGCCTGCCACTGACGCTGGCCACC]
[+] EMBL BM631487 [CCGCCCACGCGTCCGGTCCAACCAGCAGATCGGCATCATGCTGAACCGCGACCTGCAGGTCGCGTATCGGGAGTTTGCCCAGCAGCTGCTGCGAGTTTGCGACAACAATCCGAAGCTTGGCGATGTTCCGATCCAGTTCAAGGCTCCGATCTACGGTACCAACGATCCGTCGTTCACTGATTTCGTCGCACCAGGAGTCATTTTGACTATCGTGTTCTTCCTGGCCGTGGCACTGACGTCCTCCGCGCTGATCATCGAGCGTACCGAGGGTTTGCTGGATCGATCGTGGGTTGCCGGTGTGACGCCGAGCGAAATCCTGTTCTCGCACGTCATCACCCAGTTCGTGGTGATGTGCGGCCAGACCGCGCTCGTGCTGATCTTCATGATCGTGGTGTTCGGCGTGACGAACAACGGCGAGATCGGCTGGATCGTGGTGCTGACCATCCTGCAGGGTCTGTGCGGTATGTGCTTCGGGTTCGTCATTTCGGCCATCTGCGAGCTGGAGCGCAACGCTATCCAGCTCGCCCTCGGGTCGTTCTACCCGACGCTGCTGCTGTCCGGCGTGATCTGGCCGATCGAGGGCATGCCGCTCGTGCTGCGGTACGTTTCGCTCTGCCTGCCACTGACGCTGGCCACC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6541#0 CCGATGGACTTTTAGGAGCATCCGGTTGCGGTAAAACGACACTTCTATCGTGCATAGTAG 60
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 GACGAAAGCGACTAAACTCAGGAGAAATATGGGTCCTCGGTGGAAAGCCGGGAACGAAAG 120
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 GATCCGGTGTCCCTGGAGCCCGCGTAGGATACATGCCGCAGGAGATTGCTCTGTACGGTG 180
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 AATTCTCGATCCGCGAAACGATGATGTACTTCGGCTGGATCTTTGGCATGCACACGTCCG 240
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 AGATCGTCGAGCGATTACAGTTTCTGCTCAACTTTCTCGATCTGCCATCAGAGTCTCGGT 300
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 TGGTGAAGAATTTGAGTGGTGGCCAACAGCGTCGTGTATCGTTCGCCGTGGCCCTGATGC 360
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 ACGACCCGGAGCTGCTCATTCTCGACGAACCGACCGTCGGTGTGGATCCACTACTTAGAC 420
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 AAAGTATATGGAATCATCTGGTACACATCACCAAGGCCGGCCAGAAAACCGTCATCATTA 480
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 CGACGCACTACATCGAGGAAGCCCGACAAGCACACACGATCGGTCTGATGCGATCGGGTC 540
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 GACTGCTGGCGGAAGAGTCACCGAGCTGCTTGCTGTCGATGTATCGCTGCAGCAGCCCTG 600
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 GAAGGATGTCTTTCCTGAAGCTGTCACGCAAACAGGGCCAAGCCAATGTGGCACCAGCTG 660
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 AGCTGAACATCAGCAACAACATATCACTGTCGGCGCTGGCATTCGGCAACAAAAAGGACA 720
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 ACCCAGTCTACGTCAGCCAGGAAAGTGGTGTCGTCGGACTTAACTTCCACCAGAGCAAGG 780
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 AGGTGCTCATCAGTGACAGTAACGGATCCACCATTGCTATCAATGGACTCAATGGATCTG 840
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 CTCCCGGTGCGATCAGTCAAGCGGTCGAGTGCGATAACTGCACCGAATGTTCGGGTTGTT 900
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 CCAACTTTACGTCGAAGGGAAAGATCCGTGCCCTGCTGGTGAAGAACTTCCTGCGCATGT 960
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 GGCGAAACGTGGGCGTGATGCTGTTCATCTTCGCCCTGCCCGTCATGCAGGTGATCCTGT 1020
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 TCTGTCTGGCGATCGGGCGTGATCCTACTAACCTGAAAATGGCCATCGTTAACGGTGAGA 1080
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 TGAACTCGACCATCGGGGCGGACTGTGCGTTCGATCCGGGGTGCAGCTTTACCAACCTAT 1140
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 CCTGTCGCTACCTGAGCCACCTCAACACGACGATCGTGAAGGAATACTACTCGGACCTGG 1200
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 ACTCGGCGCTCGGTGCGGTGCGGGACGGCAACGCTTGGGGCGCACTGTACTTTACGGACA 1260
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 ACTTTACCGATGCACTTGTGGCGCGTATCGCTCTCGGACGCGATGCTGACGACGAGACGC 1320
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 TGGACCAGTCGGAAATTCGCGTGTGGCTCGACATGTCCAACCAGCAGATCGGCATCATGC 1380
consensus_6541#1 ----------------CCGCCCACG---CGTCCGGTCCAACCAGCAGATCGGCATCATGC 41
*** * ** * **************************
consensus_6541#0 TGAACCGCGACCTGCAGGTCGCGTATCGGGAGTTTGCCCAGCAGCTGCTGCGAGTGTGCG 1440
consensus_6541#1 TGAACCGCGACCTGCAGGTCGCGTATCGGGAGTTTGCCCAGCAGCTGCTGCGAGTTTGCG 101
******************************************************* ****
consensus_6541#0 ACAACAATCCGAAGCTTGGCGATGTTCCGATCCAGTTCAAGGCTCCGATCTACGGTACCA 1500
consensus_6541#1 ACAACAATCCGAAGCTTGGCGATGTTCCGATCCAGTTCAAGGCTCCGATCTACGGTACCA 161
************************************************************
consensus_6541#0 ACGATCCGTCGTTCACTGATTTCGTCGCACCAGGAGTCATTTTGACTATCGTGTTCTTCC 1560
consensus_6541#1 ACGATCCGTCGTTCACTGATTTCGTCGCACCAGGAGTCATTTTGACTATCGTGTTCTTCC 221
************************************************************
consensus_6541#0 TGGCCGTGGCACTGACGTCCTCCGCGCTGATCATCGAGCGTACCGAGGGTTTGCTGGATC 1620
consensus_6541#1 TGGCCGTGGCACTGACGTCCTCCGCGCTGATCATCGAGCGTACCGAGGGTTTGCTGGATC 281
************************************************************
consensus_6541#0 GATCGTGGGTTGCCGGTGTGACGCCGAGCGAAATCCTGTTCTCGCACGTCATCACCCAGT 1680
consensus_6541#1 GATCGTGGGTTGCCGGTGTGACGCCGAGCGAAATCCTGTTCTCGCACGTCATCACCCAGT 341
************************************************************
consensus_6541#0 TCGTGGTGATGTGCGGNCAGACCGCGCTCGTGCTGATCTTCATGATCGTGGTGGTCNGCG 1740
consensus_6541#1 TCGTGGTGATGTGCGGCCAGACCGCGCTCGTGCTGATCTTCATGATCGTGGTGTTCGGCG 401
**************** ************************************ ** ***
consensus_6541#0 TGACGAACAACGGCGAGATCNGCTGGATCGTGGTGCTGACCATCCTGCAGGGTCTGTGCG 1800
consensus_6541#1 TGACGAACAACGGCGAGATCGGCTGGATCGTGGTGCTGACCATCCTGCAGGGTCTGTGCG 461
******************** ***************************************
consensus_6541#0 GTATGTGCTTCGGGTTCGTCATTTCGGCCATCTGCGAGCTGGAGCGCAACGCTATCCAGC 1860
consensus_6541#1 GTATGTGCTTCGGGTTCGTCATTTCGGCCATCTGCGAGCTGGAGCGCAACGCTATCCAGC 521
************************************************************
consensus_6541#0 TCGCCCTCGGGTCGTTCTACCCGACGCTGCTGCTGTCCGGCGTGATCTGGCCGATCGAGG 1920
consensus_6541#1 TCGCCCTCGGGTCGTTCTACCCGACGCTGCTGCTGTCCGGCGTGATCTGGCCGATCGAGG 581
************************************************************
consensus_6541#0 GCATGCCGCTCGTGCTGCGGTACGTTTCGCTCTGCCTGCCACTGACGCTGGCCACCACGT 1980
consensus_6541#1 GCATGCCGCTCGTGCTGCGGTACGTTTCGCTCTGCCTGCCACTGACGCTGGCCACC---- 637
********************************************************
consensus_6541#0 CCCTCCGCTCGATACTGGCCCGCGGCTGGAGCATAATGGAGCCGGACGTGTATATGGGCT 2040
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 TCGTTTCGACGATCGCCTGGATTGCGCTGTTCCTCGTCATCACGATGCTGGTGCTGAAGT 2100
consensus_6541#1 ------------------------------------------------------------
consensus_6541#0 TCAAGCGCGGCTAAGCGGCGCGAGGCAAGC 2130
consensus_6541#1 ------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||