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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6572#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1419 fasta sequence
[AGGCAAGAATTCCGCACGATGCTCGAGTTGTTTCAAATAACCAAAACAACAAAACCTCACAAAGCAAAAAACCGTATCAAAATTGTACACTCCTCAAACACTATCTCGGAAGCNTTCGGTGCATATTTTATAAATATCCTGAAACATGTTCCAATGCCGCTATATGGTTTCTGGTGACATTCAGGTAGGGGTTAGGACNTTTTTGTNTATACGCGGGGTGAAAAAATGGGTAAACAAAACGACACAACNACCGGCGGTGAACTAAATTTGAAGGTTTAAGGTGGTNACGCGGTGGTTCCCACAACCTTTTTCNCAGACGGAGAAGGCCAAAAACNNGTTCCTTTAAGGTTCCCAGGAAGGAGACAGACGGAAACAAGGAACACTAACCCCAAGAACAGTNGGTTTGACGGAANACGACACACAAGGCCCCCCGCGGGGGGGGCNGGAACGAGCACACCAANGGGGGGCNGGACAAAACGGTGTATACGTTAGGCCNGACAAGCTTGGGGNGNTNATACGAANAGACGCTGTCTCCCACGAAGGGGNAGGGNACGAAAAAGACGGGNCGAAACAACACGGAGAACAACGGTTTGGGGGGAAACCACCCAAGACAGCAACAGGGTGGTGTCAGACAANCCCTCGGTGGAGTATTTTCTCCCGAACAGGGAAGNCAGGAAGACACGGAGACCTTTNTTGTGGGAAAACCGTCAATGATGATCCGCGCTATTCGCNACAGAAGANTTTTGGNGCGCGAGAACAAGGTGTTNTAGCACCGACGCCAAGAANCCACCAGCAAATTGGTNAGAGTTANTGAAACANAATTCGGGGGGTGCGGTCTGCAGGGGTGATTTCCNCCCACAGACACGGGCAGCAAACCGCGGGGGGNCNAACACANTTCTNGGTGAGGTTAATCATGCNTGTGNATTGNCGCGCNCAGCAAACAGGCAGGCAACCAACACAAGGGGAGTATTTTAAAAACAAGACCCGTTCTNCTAAGATAGTTTTATCAAGAAGGCCGTTNTCCCNTCANACAACAGANCGCACGTTCTATGTTGTTAACACCAGCNGTTTTTGTACCAGCCGGACGACAAGCGGNGACGCNTATTTTCACACCAANCNGGGGGGGTGCAACCACCCCGCAGNGANTGGGGGAAGAAAACCCCNCGCGGGCNGTTAGGTTGACGTACAAANGACGGGCGCGCGAACGAGGGTGGCANTTTTANACGCCATGCGGTGGGACCACAACANGGGGCCAGGCAACAGAACCCGGGANAGAACGACGGCAACACAGAGATTGGTGGCGCTCAACAAAAAAACGACCTTTTGGGGNAGGGNCCACCGCGCCACGGGAAGAAGCGATGGGGNACGGAACAGNGCNTCTGCCTGTCNCNGAACACNGCGNGAACAAAGGACGGCCCA]
[+] EMBL BX468257 [AGGCAAGAATTCCGCACGATGCTCGAGTTGTTTCAAATAACCAAAACAACAAAACCTCACAAAGCAAAAAACCGTATCAAAATTGTACACTCCTCAAACACTATCTCGGAAGCNTTCGGTGCATATTTTATAAATATCCTGAAACATGTTCCAATGCCGCTATATGGTTTCTGGTGACATTCAGGTAGGGGTTAGGACNTTTTTGTNTATACGCGGGGTGAAAAAATGGGTAAACAAAACGACACAACNACCGGCGGTGAACTAAATTTGAAGGTTTAAGGTGGTNACGCGGTGGTTCCCACAACCTTTTTCNCAGACGGAGAAGGCCAAAAACNNGTTCCTTTAAGGTTCCCAGGAAGGAGACAGACGGAAACAAGGAACACTAACCCCAAGAACAGTNGGTTTGACGGAANACGACACACAAGGCCCCCCGCGGGGGGGGCNGGAACGAGCACACCAANGGGGGGCNGGACAAAACGGTGTATACGTTAGGCCNGACAAGCTTGGGGNGNTNATACGAANAGACGCTGTCTCCCACGAAGGGGNAGGGNACGAAAAAGACGGGNCGAAACAACACGGAGAACAACGGTTTGGGGGGAAACCACCCAAGACAGCAACAGGGTGGTGTCAGACAANCCCTCGGTGGAGTATTTTCTCCCGAACAGGGAAGNCAGGAAGACACGGAGACCTTTNTTGTGGGAAAACCGTCAATGATGATCCGCGCTATTCGCNACAGAAGANTTTTGGNGCGCGAGAACAAGGTGTTNTAGCACCGACGCCAAGAANCCACCAGCAAATTGGTNAGAGTTANTGAAACANAATTCGGGGGGTGCGGTCTGCAGGGGTGATTTCCNCCCACAGACACGGGCAGCAAACCGCGGGGGGNCNAACACANTTCTNGGTGAGGTTAATCATGCNTGTGNATTGNCGCGCNCAGCAAACAGGCAGGCAACCAACACAAGGGGAGTATTTTAAAAACAAGACCCGTTCTNCTAAGATAGTTTTATCAAGAAGGCCGTTNTCCCNTCANACAACAGANCGCACGTTCTATGTTGTTAACACCAGCNGTTTTTGTACCAGCCGGACGACAAGCGGNGACGCNTATTTTCACACCAANCNGGGGGGGTGCAACCACCCCGCAGNGANTGGGGGAAGAAAACCCCNCGCGGGCNGTTAGGTTGACGTACAAANGACGGGCGCGCGAACGAGGGTGGCANTTTTANACGCCATGCGGTGGGACCACAACANGGGGCCAGGCAACAGAACCCGGGANAGAACGACGGCAACACAGAGATTGGTGGCGCTCAACAAAAAAACGACCTTTTGGGGNAGGGNCCACCGCGCCACGGGAAGAAGCGATGGGGNACGGAACAGNGCNTCTGCCTGTCNCNGAACACNGCGNGAACAAAGGACGGCCCA]
consensusID : consensus_6572#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1179 fasta sequence
[CCTCTCGCGAAAGGCACTTCACAACCTTAGTACACTCGCAACTCGCACTGAAACTGTGTTACACAAAGCTCTTTTTTAAGAACGATTTTTTGTTTGTTTGCTATTAGTTTCAATAACTATTTGATGAATTTTTGCACTCAGTTTTGGATGTTTTTTGCCTTTTTTTATCACGTTTTTTAGCCGTTTGTGTGCATACATATAAATATATATATTAAATATGTATACTCTTTTTCTCTCTCTGTCTCGCACGATCGATATTGCGGGACACCGTGTCGGTCGCAGGATGTGTGTCGCATCAATCGTAGACCATTAGGAAGGATTTAGAAAAAAAAATTGCAACACGCAAACAGCTGCCGTGAGCTTGGGTGGGCTTGTTACGCTTGTTTGTTGGAAAAATGCAGTTTAATCGTTTAAACATTTACTAACCAACGCGCTATCGCACACTGCCCGAGGACGACGACGAACAAGCGTTGATGAAGAGAAGAAAATCTCGAGTTTGTTTCCAAATAACAAAACAACAAAACCTCACAAAGCAAAAAACCGTATCAAAATTGTACACTCCTCAAACACTATCTCGGAAGCATTCGGTGCATATTTTATAAATATCCTGCAAACATGTTCAATGCCGCTATTGTTTCTGTGATTTTGTGGTTAGATTTTTTTTCGGGGTGAAAATGGTAAACAAACGACACACAACGCGTGAACTAATTTGAGTTTAGTGTACGGTTGTCAAACTTTCAAAGAAGCAAACATCTAGTCAGAGAAGAGAAAGACAACAAAATGTAAGAAAAAAGCCCGGGGGAGAGAAAGGGAGAAAGTAAGTAGCAGAAGTGATAAAACTCAAAGAGAAAACGAACAGAAAGTGGAACAAAAAAGTAAAACTGTATTCAAAGAAGAAGACTAGAACTATTTCATACAAATTGCAAAGTCACCCACCAATGATGATTGTGTGGTTCAAAGAAGGAAATGATAGTTAGAAGAAAAGATAAAACTAATTAAACTCAAACATATGAGTGAGAAGATAAAAGGAACGAGGAACGATGAAAGCGAGTATAATGAAAAGCAAACGAAACAAATGCAAAACTGTTCACAGAATGAAACTCTCAAAGAAGCAGGCAAGAGTAAAACAAAACAAAAACAAACGTTTCTATTCTAGAAACTCAAAACAAGTGAACATAC]
[+] EMBL BX621823 [CCTCTCGCGAAAGGCACTTCACAACCTTAGTACACTCGCAACTCGCACTGAAACTGTGTTACACAAAGCTCTTTTTTAAGAACGATTTTTTGTTTGTTTGCTATTAGTTTCAATAACTATTTGATGAATTTTTGCACTCAGTTTTGGATGTTTTTTGCCTTTTTTTATCACGTTTTTTAGCCGTTTGTGTGCATACATATAAATATATATATTAAATATGTATACTCTTTTTCTCTCTCTGTCTCGCACGATCGATATTGCGGGACACCGTGTCGGTCGCAGGATGTGTGTCGCATCAATCGTAGACCATTAGGAAGGATTTAGAAAAAAAAATTGCAACACGCAAACAGCTGCCGTGAGCTTGGGTGGGCTTGTTACGCTTGTTTGTTGGAAAAATGCAGTTTAATCGTTTAAACATTTACTAACCAACGCGCTATCGCACACTGCCCGAGGACGACGACGAACAAGCGTTGATGAAGAGAAGAAAATCTCGAGTTTGTTTCCAAATAACAAAACAACAAAACCTCACAAAGCAAAAAACCGTATCAAAATTGTACACTCCTCAAACACTATCTCGTAAGCATTCGGTGCATATTTTATAAATATCCTGCAAACATGTTCAATGCCGCTATTGTTTCTGTGATTTTGTGGTTAGATTTTTTTTCGGGGTGAAAATGGTAAACAAACGACACACAACGCGTGAACTAATTTGAGTTTAGTGTACGGTTGTCAAACTTTCAAAGAAGCAAACATCTAGTCAGAGAAGAG AAGACca ]
[+] EMBL BM651774 [ ccgCGTTTAAACATTTACTAACCAACGCGCTATCGCACACTGCCCGAGGACGACGACGAACAAGCGTTGATGAAGAGAAGAAAATCTCGAGTTTGTTTCCAAATAACAAAACAACAAAACCTCACAAAGCAAAAAACCGTATCAAAATTGTACACTCCTCAAACACTATCTCGGAAGCATTCGGTGCATATTTTATAAATATCCTGCAAACATGTTCAATGCCGCTATTGTTTCTGTGATTTTGTGGTTAGATTTTTTTTCGGGGTGAAAATGGTAAACAAACGACACACAACGCGTGAACTAATTTGAGTTTAGTGTACGGTTGTCAAACTTTCAAAGAAGCAAACATCTAGTCAGAGAAGAGAAAGACAACAAAATGTAAGAAAAAAGCCCGGGGGAGAGAAAGGGAGAAAGTAAGTAGCAGAAGTGATAAAACTCAAAGAGAAAACGAACAGAAAGTGGAACAAAAAAGTAAAACTGTATTCAAAGAAGAAGACTAGAACTATTTCATACAAATTGCAAAGTCACCCACCAATGATGATTGTGTGGTTCAAAGAAGGAAATGATAGTTAGAAGAAAAGATAAAACTAATTAAACTCAAACATATGAGTGAGAAGATAAAAGGAACGAGGAACGATGAAAGCGAGTATAATGAAAAGCAAACGAAACAAATGCAAAAC ]
[+] EMBL BX618850 [ ACGACGACGAACAAGCGTTGACGAAGAGAAGAAAATCTCGAGTTTGTTTCCAAATAACAAAACAACAAAACCTCACAAAGCAAAAAACCGTATCAAAATTGTACACTCCTCAAACACTATCTCGGAAGCATTCGGTGCATATTTTATAAATATCCTGCAAACATGTTCAATGCCGCTATTGTTTCTGTGATTTTGTGGTTAGATTTTTTTTCGGGGTGAAAATGGTAAACAAACGACACACAACTCGTGAACTAATTTGAGTTTAGTGTACGGTTGTCAAACTTTCAAAGAAGCAGACATCTAGTCAGAGAAGAGAAAGACAAC ]
[+] EMBL BX611265 [ TTATAAATATCCTGCAAACATGTTCAATGCCGCTATTGTTTCTGTGATTTTGTGGTTAGATTTTTTTTCGGGGTGAAAATGGTAAACAAACGACACACAACGCGTGAACTAATTTGAGTTTAGTGTACGGTTGTCAAACTTTCAAAGAAGCAAACATCTAGTCAGAGAAGAGAAAGACAACAAAATGTAAGAAAAAAGCCCGGGGGAGAGAAAGGGAGAAAGTAAGTAGCAGAAGTGATAAAACTCAAAGAGAAAACGAACAGAAAGTGGAACAAAAAAGTAAAACTGTATTCAAAGAAGAAGACTAGAACTATTTCATACAAATTGCAAAGTCACCCACCAATGATGATTGTGTGGTTCAAAGAAGGAAATGATAGTTAGAAGAAAAGATAAAACTAATTAAACCCAAACATATGAGTGAGAAGATAAAAGGAACGAGGAACGATGAAAGCGAGTATAATGAAAAGCAAACGAAACAAATGCAAAACTGTTCACAGAATGAAACTCTCAAAGAAGCAGGCAAGAGTAAAACAAAACAAAAACAAACGTTTCTATTCTAGAAACTCAAAACAAGTGAACATAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6572#0 AGGCAAGAATTCCGCACGATGCTCGAGTTGTTTCAAATAACCAAAACAACAAAACCTCAC 60
consensus_6572#1 ------------------------------CCTCTCGCGAAAGGCACTTCACAACCTTAG 30
** * ** ** ***** *
consensus_6572#0 AAAGCAAAAAAC-CGTATCAAAATTGTACACTCCTCAAACACTATCTCGGAAGCNTTCGG 119
consensus_6572#1 TACACTCGCAACTCGCACTGAAACTGTGT-TACACAAAGCTCTTTTTTAAGAACG----- 84
* * *** ** * *** *** * ** * ** * * * *
consensus_6572#0 TGCATATTTTATAAATATCCTGAAACATGTTCCAATGCCGCTATATGGTTTCTGGTGACA 179
consensus_6572#1 ---ATTTTTTGTTTGTTTGCT---ATTAGTTTCAATA--ACTATTTGATGAATTTTTGCA 136
** **** * * * ** * *** **** **** ** * * * **
consensus_6572#0 TTCAGGTAGGGGTTAGGACNTTTTTGTNTATACGCGGGGTGAAAAAATGGGTAAACAAAA 239
consensus_6572#1 CTCAGTT-----TTGGATGTTTTTTGCCTTTTT------TTATCACGTTTTTTAGC---- 181
**** * ** * ****** * * * * * * * * *
consensus_6572#0 CGACACAACNACCGGCGGTGAACTAAATTTGAAGGTTTAAGGTGGTNACGCGGTGGTTCC 299
consensus_6572#1 -----CGTTTGTGTGCATACATATAAATATATATATTAAATATGTATAC----TCTTTTT 232
* ** * ***** * * ** ** ** ** * **
consensus_6572#0 CACAACCTTTTTCNCA-GACGGAGAAGGCCAAAAACNNGTTCCTTTAAGGTTCCCAGGAA 358
consensus_6572#1 CTCTCTCTGTCTCGCACGATCGATATTGCGGGACACCGTGTC-------GGTCGCAGGAT 285
* * ** * ** ** ** ** * ** * ** ** * ** *****
consensus_6572#0 GGAGACAGACGGAAACAAGGAACACTAACCCCAAGAACAGTNGGTTTGACGGAANACGAC 418
consensus_6572#1 GTGTGTCGCATCAATCGTAGACCATTAG-----GAAGGATTTAGAAAAAAAAATTGCAAC 340
* * ** * ** ** ** * * * * * * * **
consensus_6572#0 ACACAAG-GCCCCCCGCGGGGGGGGCNGGAACGAGCACACCAANGGGGGGCNGGACAAAA 477
consensus_6572#1 ACGCAAACAGCTGCCGTGAGCTTGGGTGGGCTTGTTACGCT--TGTTTGTTGGAAAAATG 398
** *** * *** * * ** ** ** * * * * * **
consensus_6572#0 CGGTGTATACGTTAGGCCNGACAAGCTTGGGGNGNTNATACGAANAGACGCTGTCTCCCA 537
consensus_6572#1 CAGTTTAATCGTT-----TAAACATTTACTAACCAACGCGCTATCGCACACTGCCC---- 449
* ** ** **** * * * * * ** *** *
consensus_6572#0 CGAAGGGGNAGGGNACGAAAAAGACGGGNCGAAACAACACGGAGAACAACGGTTTGGGGG 597
consensus_6572#1 ----GAGGACGACGACGAACAAGCGTTGATGAA--GAGAAGAAAATCTCGAGTTTGTTTC 503
* ** * ***** *** * *** * * * * * * *****
consensus_6572#0 GAAACCACCCAAGACAGCAACAGGGTGGTGTCAGACAANCCCTCGGTGGAGTATTTTCTC 657
consensus_6572#1 CAAATAAC--AAAACAACAAAACCTCACAAAGCAAAAAACCGTATCAAAATTGTACACTC 561
*** ** ** *** *** * * ** ** * * * * ***
consensus_6572#0 CCGAACAGGGAAGNCAGGAAGACACGGAGACCTTTNTTGTGGGAAAACCGTCAATGATGA 717
consensus_6572#1 CTCAAACACTATCTCGGAAGCATTCGGTG-CATATTTTATAA-ATATCCTGCAAACATGT 619
* ** * * * * * *** * * * * ** * * * ** *** ***
consensus_6572#0 TCCGCGCTATTCGCNACAGAAGANTTTTGGNGCGCGAGAACAAGGTGTTNTAGCACCGAC 777
consensus_6572#1 TCAATGCCGCTATTGTTTCTGTGATTTTGTGGTTAGATTTT---TTTTCGGGGTGAAAAT 676
** ** * ***** * ** * * * *
consensus_6572#0 GCCAAGAANCCACCAGCAAATTGGTNAGAGTTANTGAAACANAATTCGGGGGGTGCGGTC 837
consensus_6572#1 GGTAAACAAACGACA-CACAACGCGTGAACTAATTTGAGTTTAGTGTACGGTTGTCAAAC 735
* ** * * ** ** * * * * * * * * * ** * *
consensus_6572#0 TGCAGGGGTGATTTCCNCCCACAGACACGGGCAGCAAACCGCGGGGGGNCNAACACANTT 897
consensus_6572#1 TTTCAAAGAAGCAAACATCTAGTCAGAGAAGAGAAAGACAACAAAATGTAAGAAAAAAGC 795
* * * * * * * * * ** * * * * *
consensus_6572#0 CTNGGTGAGGTTAATCATGCNTGTGNATTGNCGCGCNCAGCAAACAGGCAGGCAACCAAC 957
consensus_6572#1 CCGGGGGAGAGAAAGGGAGAAAGTAAGTAGCAGAAGTGATAAAACTCAAAGAGAA--AAC 853
* ** *** ** * ** * * * * **** ** ** ***
consensus_6572#0 ACAAGGGGAGTATTTTAAAAACAAGACCCGTTCTNCTAAGATAGTTTTATCAAGAAGGCC 1017
consensus_6572#1 GAACAGAAAGTGGAACAAAAAAGTAAAACTGTATTCAAAG-----------AAGAAGACT 902
* * *** ***** * * * * * *** ****** *
consensus_6572#0 GTTNTCCCNTCANACAACAGANCGCACGTTCTATGTTGTTAACACCAGCNGTTTTTGTAC 1077
consensus_6572#1 AGAACTATTTCATACAA---ATTGCA------AAGTCACC--CACCAATGATGATTGTGT 951
*** **** * *** * ** ***** * ****
consensus_6572#0 CAGCCGGACGACAAGCGGNGACGCNTATTTTCACACCAANCNGGGGGGGTGCAACCACCC 1137
consensus_6572#1 GGTTCAAAGAAGGAAATGATAGTTAGAAGAAAAGATAAAACTAATTAAACTCAAACAT-- 1009
* * * * * * * * * ** * *** **
consensus_6572#0 CGCAGNGANTGGGGGAAGAAAACCCCNCGCGGGCNGTTAGGTTGACGTACAAANGACGGG 1197
consensus_6572#1 ----ATGAGTGAGAAGATAAAAGGAACGAGGAACGATGAAAGCGA-GTATAA-TGAAAAG 1063
** ** * * **** * * * * ** *** ** ** *
consensus_6572#0 CGCGCGAA-CGAGGGTGGCANTTTTANACGCCATGCGGTGGGACCACAACANGGGGCCAG 1256
consensus_6572#1 CAAACGAAACAAATGCAAAACTGTT------CACAGAATGAAACTCT--CAAAGAAGCAG 1115
* **** * * * * * ** ** ** ** ** * ***
consensus_6572#0 GCAACAGAACCCGGGANAGAACGACGGCAA-CACAGAGATTGGTGGCGCTCAACAAAAAA 1315
consensus_6572#1 GCAAGAG----TAAAACAAAACAAAAACAAACGTTTCTATTCTAGAAACTCA--AAACAA 1169
**** ** * * *** * *** * *** * **** *** **
consensus_6572#0 ACGACCTTTTGGGGNAGGGNCCACCGCGCCACGGGAAGAAGCGATGGGGNACGGAACAGN 1375
consensus_6572#1 GTGAACATAC-------------------------------------------------- 1179
** * *
consensus_6572#0 GCNTCTGCCTGTCNCNGAACACNGCGNGAACAAAGGACGGCCCA 1419
consensus_6572#1 --------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||