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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6592#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1215 fasta sequence
[CTCTTCCCTTTCCCGTGTGAAGCAGAGACACACAGTATTACACACTATCTGATAGAATACTGCGCTTTCGCGTTCCGCAGACGTTAATATTTTGAGCATTATGCTTAACATAATGCGTGAGAGCACTATGATCACGATTTTACTTTAGCGTTTCGCGCAGTGCTTGCGTTCGGCAGTTGCGTGTTTGCGATGAGTTCGGTTTCCCACATTCAGTGTAGATCTGTTCTGCTGCTTTGGTAACGCAGGGTGAGCGCGCAAGGAGGTAGATCTTTAGTTTTACTTGCATATTCGCGACTTATTATGCACCTACACCTTAAAAGGCAAAGCGTTTAAACAGTTTAAGTTGACAAAAAGACAACGTTCTGGAAAATTGGCCCCTTCACACTTCGCTAAGAACGCGTTTACTTAGCGTGTGTGCTTACTAGTTATGGCAAATTTATGTTTATCTTTGGCACGTGGCTAACCATATTTCCTATTGCGATAGGACACACACACACACACAGGAGCGAGAGAGGACACAGGTCGTGTGCAAGCAAGTGCTCAGAGCTTTGGGCCAGAGCTAGGGAGCGGTGCATGTTTTTAACAATAAAATGACACTCCCACTGCCAACACATACCACAAAACCACAAACAGCAGAATCACATCATCATCACGTTCCGTTACGAATATCAGGATTAACTCTAGTTCTCGTGTCATGCATACAGCACGCATCTAATTTTTCCCCTCTCTCTCTCTCTTTCTCTATTTAT-CTAAAAAGCAC-TTTTACC-GGCTTGGAAACGTATGGTAA-TTGTACATATAAGACTACTTACATCCCACAGTGTGTGCCCGTACGGTACACCTTCTCTATCCAGCCTCCTCTACCTGGTGGTCGGTCTGCTGTATCAGCGGATGAGTCCTTTCGATTCCTTATGCGCACACACGGTGGTTCCGGCGGAAGGGAGGGAAGACAAGCGGCGGATTGGTTTTTTTTTCTTTTGCTGCAATGACACATTGAACATTGATTAACAGAATTAGCGTAATTGAGAGAGAGAGAGAGAGAAAGAGAGGAGAAAAAGGATTTATCGTTTGGGACCCTACTCCATTACGCTTCTGAGGAACCCTTTTCCCTCCCCGTATCATTGTACCAAATCTTTCAACCTCGTAACGGGAAGCGGTGCCCCATGAGACGTACTCTATTTCATGATTAACCAATAAAAATCTCGACACGAAAAAAAA]
[+] EMBL BX624797 [CTCTTCCCTTTCCCGTGTGAAGCAGAGACACACAGTATTACACACTATCTGATAGAATACTGCGCTTTCGCGTTCCGCAGACGTTAATATTTTGAGCATTATGCTTAACATAATGCGTGAGAGCACTATGATCACGATTTTACTTTAGCGTTTCGCGCAGTGCTTGCGTTCGGCAGTTGCGTGTTTGCGATGAGTTCGGTTTCCCACATTCAGTGTAGATCTGTTCTGCTGCTTTGGTAACGCAGGGTGAGCGCGCAAGGAGGTAGATCTTTAGTTTTACTTGCATATTCGCGACTTATTATGCACCTACACCTTAAAAGGCAAAGCGTTTAAACAGTTTAAGTTGACAAAAAGACAACGTTCTGGAAAATTGGCCCCTTCACACTTCGCTAAGAACGCGTTTACTTAGCGTGTGTGCTTACTAGTTATGGCAAATTTATGTTTATCTTTGGCACGTGGCTAACCATATTTCCTATTGCGATAGGACACACACACACACACAGGAGCGAGAGAGGACACAGGTCGTGTGCAAGCAAGTGCTCAGAGCTTTGGGCCAGAGCTAGGGAGCGGTGCATGTTTTTAACAATAAAATGACACTCCCACTGCCAACACATACCACAAAACCACAAACAGCAGAATCACATCATCATCACGTTCCGTTACGAATATCAGGATTAACTCTAGTTCTCGTGTCATGCATACAGCACGCATCTAATTTTTCCCCTCTCTCTCTCTCTTTCTCTATTTATCCTAAAAAGCACTTTTTACCGGGCTTGGAAACGTATGGTAATTTGTACATATAAGACT ]
[+] EMBL BM640582 [ ccgATGCATACAGCACGCATCTAATTTT CCCTCTCTCTCTCTCTTTCTCTATTTAT CTAAAAAGCAC TTTTACC GGCTTGGAAACGTATGGTAA TTGTACATATAAGACTACTTACATCCCACAGTGTGTGCCCGTACGGTACACCTTCTCTATCCAGCCTCCTCTACCTGGTGGTCGGTCTGCTGTATCAGCGGATGAGTCCTTTCGATTCCTTATGCGCACACACGGTGGTTCCGGCGGAAGGGAGGGAAGACAAGCGGCGGATTGGTTTTTTTTTCTTTTGCTGCAATGACACATTGAACATTGATTAACAGAATTAGCGTAATTGAGAGAGAGAGAGAGAGAAAGAGAGGAGAAAAAGGATTTATCGTTTGGGACCCTACTCCATTACGCTTCTGAGGAACCCTTTTCCCTCCCCGTATCATTGTACCAAATCTTTCAACCTCGTAACGGGAAGCGGTGCCCCATGAGACGTACTCTATTTCATGATTAACCAATAAAAATCTCGACACG ]
[+] EMBL AGA282583 [ TCTTTCTCTATTTAT CTAAAAAGCAC TTTTACC GGCTTGGAAACGTATGGTAA TTGTACATATAAGACTACTTACATCCCACAGTGTGTGCCCGTACGGTACACCTTCTCTATCCAGCCTCCTCTACCTGGTGGTCGGTCTGCTGTATCAGCGGATGAGTCCTTTCGATTCCTTATGCGCACACACGGTGGTTCCGGCGGAAGGGAGGGAAGACAAGCGGCGGATTGGTTTTTTTTTCTTTTGCTGCAATGACACATTGAACATTGATTAACAGAATTAGCGTAATTGAGAGAGAGAGAGAGAGAAAGAAAGGAGAAAAAGGATTTATCGTTTGGGACCCTACTCCATTACGCTTCTGAGGAA ]
[-] EMBL AGA280953 [ TTTTCCCTCCCCGTATCATTGTACCAAATCTTTCAACCTCGTAACGGGAAGCGGTGCCCCATGAGACGTACTCTATTTCATGATTAACCAATAAAAATCTCGACACGAAAAAAAA]
consensusID : consensus_6592#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 457 fasta sequence
[CCGTGGTAATTGTACATATAAGACTACTTACATCCCACAGTGTGTGCCCGTACGGTACACCTTCTCTCTATCCAGCCTCCTCTACCTGGTGGTCGGTCTGCTGTATCAGCGGATGAGTCCTTTCGATTCCTTATGCGTACACACGGTGGTTCCGGCGGAAGGGAGGGAAGACAAGCGGCGGATTGGGTTTTTTTCTTTTGCTGCAATGACACATTGAACATTGATTAACAGAATTAGTGTAATTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAAGAAGGATTTATCGTTTGGGACCCTACTCCATTACGCTTCTGAGGAACCCTTTTCCCTCCCCGTATCATTGTACCAAATCTTTCAACCTCGTAACGGGAAGCGGTGCCCCATGAGACGTACTCT]
[+] EMBL BM612207 [CCGTGGTAATTGTACATATAAGACTACTTACATCCCACAGTGTGTGCCCGTACGGTACACCTTCTCTCTATCCAGCCTCCTCTACCTGGTGGTCGGTCTGCTGTATCAGCGGATGAGTCCTTTCGATTCCTTATGCGTACACACGGTGGTTCCGGCGGAAGGGAGGGAAGACAAGCGGCGGATTGGGTTTTTTTCTTTTGCTGCAATGACACATTGAACATTGATTAACAGAATTAGTGTAATTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAAGAAGGATTTATCGTTTGGGACCCTACTCCATTACGCTTCTGAGGAACCCTTTTCCCTCCCCGTATCATTGTACCAAATCTTTCAACCTCGTAACGGGAAGCGGTGCCCCATGAGACGTACTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6592#0 CTCTTCCCTTTCCCGTGTGAAGCAGAGACACACAGTATTACACACTATCTGATAGAATAC 60
consensus_6592#1 ------------------------------------------------------------
consensus_6592#0 TGCGCTTTCGCGTTCCGCAGACGTTAATATTTTGAGCATTATGCTTAACATAATGCGTGA 120
consensus_6592#1 ------------------------------------------------------------
consensus_6592#0 GAGCACTATGATCACGATTTTACTTTAGCGTTTCGCGCAGTGCTTGCGTTCGGCAGTTGC 180
consensus_6592#1 ------------------------------------------------------------
consensus_6592#0 GTGTTTGCGATGAGTTCGGTTTCCCACATTCAGTGTAGATCTGTTCTGCTGCTTTGGTAA 240
consensus_6592#1 ------------------------------------------------------------
consensus_6592#0 CGCAGGGTGAGCGCGCAAGGAGGTAGATCTTTAGTTTTACTTGCATATTCGCGACTTATT 300
consensus_6592#1 ------------------------------------------------------------
consensus_6592#0 ATGCACCTACACCTTAAAAGGCAAAGCGTTTAAACAGTTTAAGTTGACAAAAAGACAACG 360
consensus_6592#1 ------------------------------------------------------------
consensus_6592#0 TTCTGGAAAATTGGCCCCTTCACACTTCGCTAAGAACGCGTTTACTTAGCGTGTGTGCTT 420
consensus_6592#1 ------------------------------------------------------------
consensus_6592#0 ACTAGTTATGGCAAATTTATGTTTATCTTTGGCACGTGGCTAACCATATTTCCTATTGCG 480
consensus_6592#1 ------------------------------------------------------------
consensus_6592#0 ATAGGACACACACACACACACAGGAGCGAGAGAGGACACAGGTCGTGTGCAAGCAAGTGC 540
consensus_6592#1 ------------------------------------------------------------
consensus_6592#0 TCAGAGCTTTGGGCCAGAGCTAGGGAGCGGTGCATGTTTTTAACAATAAAATGACACTCC 600
consensus_6592#1 ------------------------------------------------------------
consensus_6592#0 CACTGCCAACACATACCACAAAACCACAAACAGCAGAATCACATCATCATCACGTTCCGT 660
consensus_6592#1 ------------------------------------------------------------
consensus_6592#0 TACGAATATCAGGATTAACTCTAGTTCTCGTGTCATGCATACAGCACGCATCTAATTTTT 720
consensus_6592#1 ------------------------------------------------------------
consensus_6592#0 CCCCTCTCTCTCTCTCTTTCTCTATTTATCTAAAAAGCACTTTTACCGGCTTGGAAACGT 780
consensus_6592#1 ----------------------------------------------------------CC 2
consensus_6592#0 ATGGTAATTGTACATATAAGACTACTTACATCCCACAGTGTGTGCCCGTACGGTACACCT 840
consensus_6592#1 GTGGTAATTGTACATATAAGACTACTTACATCCCACAGTGTGTGCCCGTACGGTACACCT 62
***********************************************************
consensus_6592#0 TCTCT--ATCCAGCCTCCTCTACCTGGTGGTCGGTCTGCTGTATCAGCGGATGAGTCCTT 898
consensus_6592#1 TCTCTCTATCCAGCCTCCTCTACCTGGTGGTCGGTCTGCTGTATCAGCGGATGAGTCCTT 122
***** *****************************************************
consensus_6592#0 TCGATTCCTTATGCGCACACACGGTGGTTCCGGCGGAAGGGAGGGAAGACAAGCGGCGGA 958
consensus_6592#1 TCGATTCCTTATGCGTACACACGGTGGTTCCGGCGGAAGGGAGGGAAGACAAGCGGCGGA 182
*************** ********************************************
consensus_6592#0 TTGGTTTTTTTTTCTTTTGCTGCAATGACACATTGAACATTGATTAACAGAATTAGCGTA 1018
consensus_6592#1 TTGGGTTTTTTT-CTTTTGCTGCAATGACACATTGAACATTGATTAACAGAATTAGTGTA 241
**** ******* ******************************************* ***
consensus_6592#0 ATTGAGAGAGAGAGAGAGAGAAAGAGAG-------------------------------- 1046
consensus_6592#1 ATTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 301
********************* ******
consensus_6592#0 ----------------------------GAGAAAAAGGATTTATCGTTTGGGACCCTACT 1078
consensus_6592#1 AGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAAGAAGGATTTATCGTTTGGGACCCTACT 361
***** **************************
consensus_6592#0 CCATTACGCTTCTGAGGAACCCTTTTCCCTCCCCGTATCATTGTACCAAATCTTTCAACC 1138
consensus_6592#1 CCATTACGCTTCTGAGGAACCCTTTTCCCTCCCCGTATCATTGTACCAAATCTTTCAACC 421
************************************************************
consensus_6592#0 TCGTAACGGGAAGCGGTGCCCCATGAGACGTACTCTATTTCATGATTAACCAATAAAAAT 1198
consensus_6592#1 TCGTAACGGGAAGCGGTGCCCCATGAGACGTACTCT------------------------ 457
************************************
consensus_6592#0 CTCGACACGAAAAAAAA 1215
consensus_6592#1 -----------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||