cluster # 663

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Anopheles gambiae
cluster # 663 cluster # 663 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_663#0 length = 641 sequences # 1

consensus_663#1 length = 445 sequences # 1

consensusID : consensus_663#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 641
fasta sequence

                              [CGCACTGAATATGACATACTGACACTCTGGTTCCGTTGCGTTGTGTCTTTGTTGGTCCTCTGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTCAAGGACGCCAAAGTCGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGATCACGTACGTACGTACGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCGGGGATTTGCCCGAGAGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAATTGCGGGAAGATTTGCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGAGACGCATACGCGCGGTACTTTGTATGGGAGCGTCATCGAATCGAGGCGTGGAGATAACTAAATTCCACCGTGTCAAAGCTGAGATAATATCCTTCGCGCAAGTAACACACAAACACACCTGCCATCGCACATTCTCTCCGTTGGCTGCAGCTGGGGAGAAGATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTCCTCGACGATAGCGCACCTAAGTCTCAGCAGGAGGCAGCAGCATCAGCAGCAGCACCAGCAGCGATGATGAAAGCATCCCTTACGCCTG]

[+] EMBL BX617103             [CGCACTGAATATGACATACTGACACTCTGGTTCCGTTGCGTTGTGTCTTTGTTGGTCCTCTGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTCAAGGACGCCAAAGTCGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGATCACGTACGTACGTACGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCGGGGATTTGCCCGAGAGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAATTGCGGGAAGATTTGCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGAGACGCATACGCGCGGTACTTTGTATGGGAGCGTCATCGAATCGAGGCGTGGAGATAACTAAATTCCACCGTGTCAAAGCTGAGATAATATCCTTCGCGCAAGTAACACACAAACACACCTGCCATCGCACATTCTCTCCGTTGGCTGCAGCTGGGGAGAAGATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTCCTCGACGATAGCGCACCTAAGTCTCAGCAGGAGGCAGCAGCATCAGCAGCAGCACCAGCAGCGATGATGAAAGCATCCCTTACGCCTG]




>consensus_663#0
CGCACTGAATATGACATACTGACACTCTGGTTCCGTTGCGTTGTGTCTTTGTTGGTCCTC
TGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTCAAGGACGCCAAAGT
CGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGATCACGTACGTACGTA
CGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCGGGGATTTGCCCGAG
AGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAATTGCGGGAAGATTT
GCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGAGACGCATACGCGCG
GTACTTTGTATGGGAGCGTCATCGAATCGAGGCGTGGAGATAACTAAATTCCACCGTGTC
AAAGCTGAGATAATATCCTTCGCGCAAGTAACACACAAACACACCTGCCATCGCACATTC
TCTCCGTTGGCTGCAGCTGGGGAGAAGATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGGGTCCTCGACGATAGCGCACCTAAGTCTCAGCAGGAGGCAGCAGCATCAGC
AGCAGCACCAGCAGCGATGATGAAAGCATCCCTTACGCCTG

consensusID : consensus_663#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 445
fasta sequence

                              [ACCCCGTACCTAAGCGCACTGAATATGACATACTGACACTCCGGTTCCGTTGCGTTGTGTCCTTGTTGATCCTCTGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTCAAGGACGCCAAAGTCGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGATCACGTACGTACGTACGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCGGGGATTTGCCCGAGAGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAATTGCGGGAAGATTTGCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGAGACGCATACGCGCGGTACTTTGTATGGGAGCTTTGCTGATTTCACTCGAGACATTGCCGGTGTGCTGTCGTGTGCCCGTACACTC]

[-] EMBL AGA280602            [ACCCCGTACCTAAGCGCACTGAATATGACATACTGACACTCCGGTTCCGTTGCGTTGTGTCCTTGTTGATCCTCTGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTCAAGGACGCCAAAGTCGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGATCACGTACGTACGTACGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCGGGGATTTGCCCGAGAGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAATTGCGGGAAGATTTGCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGAGACGCATACGCGCGGTACTTTGTATGGGAGCTTTGCTGATTTCACTCGAGACATTGCCGGTGTGCTGTCGTGTGCCCGTACACTC]




>consensus_663#1
ACCCCGTACCTAAGCGCACTGAATATGACATACTGACACTCCGGTTCCGTTGCGTTGTGT
CCTTGTTGATCCTCTGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTC
AAGGACGCCAAAGTCGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGAT
CACGTACGTACGTACGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCG
GGGATTTGCCCGAGAGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAA
TTGCGGGAAGATTTGCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGA
GACGCATACGCGCGGTACTTTGTATGGGAGCTTTGCTGATTTCACTCGAGACATTGCCGG
TGTGCTGTCGTGTGCCCGTACACTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_663#0      --------------CGCACTGAATATGACATACTGACACTCTGGTTCCGTTGCGTTGTGT 46
consensus_663#1      ACCCCGTACCTAAGCGCACTGAATATGACATACTGACACTCCGGTTCCGTTGCGTTGTGT 60
                                   *************************** ******************

consensus_663#0      CTTTGTTGGTCCTCTGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTC 106
consensus_663#1      CCTTGTTGATCCTCTGTACCTTTGCGTTGGTAAAAACTCACCCGACTTCGCAACATCTTC 120
                     * ****** ***************************************************

consensus_663#0      AAGGACGCCAAAGTCGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGAT 166
consensus_663#1      AAGGACGCCAAAGTCGTCCTTTCAGCGCTGTATCTGTACTGCCCCCACGAGCTCCTCGAT 180
                     ************************************************************

consensus_663#0      CACGTACGTACGTACGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCG 226
consensus_663#1      CACGTACGTACGTACGAGTGTTGTGGCTGTTGTTTTATCCCGCTCGTAGCCTACTAGTCG 240
                     ************************************************************

consensus_663#0      GGGATTTGCCCGAGAGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAA 286
consensus_663#1      GGGATTTGCCCGAGAGAGAAGCGCACCGTATGCACCATCACCATCGCAAGTTGACACGAA 300
                     ************************************************************

consensus_663#0      TTGCGGGAAGATTTGCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGA 346
consensus_663#1      TTGCGGGAAGATTTGCTGCCGAGCTTACACACGTGTTGTGTGCATGTGTCGCGCAAACGA 360
                     ************************************************************

consensus_663#0      GACGCATACGCGCGGTACTTTGTATGGGAGCGTCATCGAATCGAGGCGTGGAGATAACTA 406
consensus_663#1      GACGCATACGCGCGGTACTTTGTATGGGAGCTTTGCTGATTTCACTCGAGACATTGCCGG 420
                     ******************************* *    ** *  *  ** *    *  *  

consensus_663#0      AATTCCACCGTGTCAAAGCTGAGATAATATCCTTCGCGCAAGTAACACACAAACACACCT 466
consensus_663#1      TGTGCTGTCGTGT----GCCCGTACACTC------------------------------- 445
                       * *   *****    **    * * *                                

consensus_663#0      GCCATCGCACATTCTCTCCGTTGGCTGCAGCTGGGGAGAAGATAGTGTGTGTGTGTGTGT 526
consensus_663#1      ------------------------------------------------------------
                                                                                 

consensus_663#0      GTGTGTGTGTGTGTGTGTGTGTGGGTCCTCGACGATAGCGCACCTAAGTCTCAGCAGGAG 586
consensus_663#1      ------------------------------------------------------------
                                                                                 

consensus_663#0      GCAGCAGCATCAGCAGCAGCACCAGCAGCGATGATGAAAGCATCCCTTACGCCTG 641
consensus_663#1      -------------------------------------------------------