Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 6630 cluster # 6630       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6630#0 length = 894 sequences # 5  

consensusID : consensus_6630#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 894
fasta sequence
                              [AGAGAGAGAAAGAGAAAGAGTGAGAGACAGAGAAAGAGAGAGAGAGAGACAGAGAAAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAAAGAGGAAAAGCGAAAGTGAACAAAAATTAAACAAAATGCCGTTGGCGGATTTACGACCATATTTAAACATTAACTCTACCTTTACATCTACTGCTGGTGTGCGCGTAGGAGCTTTTCGTGCATG--TTTTTTTTAAATAAAAAGAAAACAAAACGTCTTTGTTCTTCGACGTGAGGAAATAAATGCTTTAGTGAGCTACTGCTGGTGCTAAATATATTTGGGCACGAGTTATTAATGT-ATTTTTTTAATTATATTTTGCTTTTTCTCGCCAATCTCCTTCAATCTTTCTCACGCATCCGTGTACCAGTGGAAAGTGGTCGCGTTTACCGGTTAAACTTCTTTTGAAATTGGCCACCTTCATCGCAACGTTTCCAATGGGCAGTGCGCTTTATATCGCTACTATATTCACTGGTGATGTGAGGGAAATATCCGCATTTGCGTCTTGTTTCCC-CCACCAAGCAAAGAAATTAAATATTTCACTCAACATGCTCACAAATAAGTTGGAAAGAATGATATGTTCGTTTCTCTTCTTTCATTTAAGAAAAAGAGTACAGAGCAGAACAATATATCGTCCGAAAGGGATTGATTACAACATTTGTCTAAAAATGTTATATTTTTATAATTAAACACGCATTAGCAAACACGCATTATATCATCTCGGTGTGGTCGTGCACACGG-CCTCTCGAGACGCGAAACGTCCGCGAAGTGGTGTGGTGCAATGGAATGATGGAGGAATGGTAAATGGCAATGGAAAGATGGATAAACAATAACACACATAACACAGCTACAGCAAAAACAATAATACTCA]

[+] EMBL BX617717             [AGAGAGAGAAAGAGAAAGAGTGAGAGACAGAGAAAGAGAGAGAGAGAGACAGAGAAAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAAAGAGGAAAAGCGAAAGTGAACAAAAATTAAACAAAATGCCGTTGGCGGATTTACGACCATATTTAAACATTAACTCTACCTTTACATCTACTGCTGGTGTGCGCGTAGGAGCTTTTCGTGCATG  TTTTTTTTAAATAAAAAGAAAACAAAACGTCTTTGTTCTTCGACGTGAGGAAATAAATGCTTTAGTGAGCTACTGCTGGTGCTAAATATATTTGGGCACGAGTTATTAATGT ATTTTTTTAATTATATTTTGCTTTTTCTCGCCAATCTCCTTCAATCTTTCTCACGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM655589             [                                                                                                                                                                                      ccgcccaCGCGTCCG GCTTTTCGTGCATGTTTTTTTTTTAAATAAAAAGAAAACAAAACGTCTTTGTTCTTCGACGTGAGGAAATAAATGCTTTAGTGAGCTACTGCTGGTGCTAAATATATTTGGGCACGAGTTATGAATGTAATTTTTATTATTATTTTTTGCTTTGTCTCGCCAATCTCCTTCAATCTTTCTCGCGCATCCGTGTACCAGTGGAAAGTGGTCGCGTTTACCGGTTAAACTTCTTTTGAAATTGGCCACCTTCATCGCAACGTTTCCAATGGGCAGTGCGCTTTATATCGCTACTATATTCACTGGTGATGTGAGGGAAATATCCGCATTTGCGTCTTGTTTCCCTCCACCAAGCAAAGAACTTAAATATTTCACTCAACATGCTCACAAATAAGTTGGAAAGAATGATATGTTCGTTTCTCTACTTTCATTTAAGAAAAAGAGTACAGAGCAGAACAATATATCGTCCTAAAGGGATTGATTACAACATTTGTCTAAAAATGTTATATTTTTATAATTAAACACGCATTAGCAAACACGCATTATATCATCTCGGTGTGGCCGTGCACACGGCCCCCTCGAGAAGCGAAACGTCCGCGAAGT                                                                                                     ]
[+] EMBL BX610783             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCCGCATTTGCGTCTTATTT  C CCACCAAGCAAAGAAATTAAATATTTCACTCAACATGCTCACAAATAAGTTGGAAAGAATGATATGTTCGTTTCTCTTCTTTCATTTAAGAAAAAGAGTACAGAGCAGAACAATATATCGTCCGAAAGGGATTGATTACAACATTTGTCTAAAAATGTTATATTTTTATAATTAAACACGCATTAGCAAACACGCATTATATCATCTCGGTGTGGTCGTGCACACGG CCTCTCGAGACGCGAAACGTCCGCGAAGTGGTGTGGTGCAATGGAATGATGGAGGAATGGTAAATGGCAATGGAAAGATGGATAAACAATAACACACATAACACAGCTACAGCAAAAACAATAATACTCA]
[+] EMBL BX610784             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ttC CCACCAAGCAAAGAAATTAAATATTTCACTCAACATGCTCACAAATAAGTTGGAAAGAATGATATGTTCGTTTCTCTTCTTTCATTTAAGAAAAAGAGTACAGAGCAGAACAATATATCGTCCGAAAGGGATTGATTACAACATTTGTCTAAAAATGTTATATTTTTATAATTAAACACGCATTAGCAAACACGCATTATATCATCTCGGTGTGGTCGTGCACACGG CCTCTCGAGACGCGAAACGTCCGCGAAGTGGTGTGGTGCAATGGAATGATGGAGGAATGGTAAATGGCAATGG                                                         ]
[+] EMBL BX610782             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATGTTCGTTTCTCTTCTTTCATTTAAGAAAAAGAGTACAGAGCAGAACAATATATCGTCCGAAAGGGATTGATTACAACATTTGTCTAAAAATGTTATATTTTTATAATTAAACACGCATTAGCAAACACGCATTATATCATCTCGGTGTGGTCGTGCACACGG CCTCTCGAGACGCGAAACGTCCGCGAAGTGGTGTGGTGCAATGGAATGATGGAG                                                                            ]


>consensus_6630#0 AGAGAGAGAAAGAGAAAGAGTGAGAGACAGAGAAAGAGAGAGAGAGAGACAGAGAAAGAG AGAGAGAGAGAGAGATAGAGAGAGAGAAAGAGGAAAAGCGAAAGTGAACAAAAATTAAAC AAAATGCCGTTGGCGGATTTACGACCATATTTAAACATTAACTCTACCTTTACATCTACT GCTGGTGTGCGCGTAGGAGCTTTTCGTGCATGTTTTTTTTAAATAAAAAGAAAACAAAAC GTCTTTGTTCTTCGACGTGAGGAAATAAATGCTTTAGTGAGCTACTGCTGGTGCTAAATA TATTTGGGCACGAGTTATTAATGTATTTTTTTAATTATATTTTGCTTTTTCTCGCCAATC TCCTTCAATCTTTCTCACGCATCCGTGTACCAGTGGAAAGTGGTCGCGTTTACCGGTTAA ACTTCTTTTGAAATTGGCCACCTTCATCGCAACGTTTCCAATGGGCAGTGCGCTTTATAT CGCTACTATATTCACTGGTGATGTGAGGGAAATATCCGCATTTGCGTCTTGTTTCCCCCA CCAAGCAAAGAAATTAAATATTTCACTCAACATGCTCACAAATAAGTTGGAAAGAATGAT ATGTTCGTTTCTCTTCTTTCATTTAAGAAAAAGAGTACAGAGCAGAACAATATATCGTCC GAAAGGGATTGATTACAACATTTGTCTAAAAATGTTATATTTTTATAATTAAACACGCAT TAGCAAACACGCATTATATCATCTCGGTGTGGTCGTGCACACGGCCTCTCGAGACGCGAA ACGTCCGCGAAGTGGTGTGGTGCAATGGAATGATGGAGGAATGGTAAATGGCAATGGAAA GATGGATAAACAATAACACACATAACACAGCTACAGCAAAAACAATAATACTCA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)