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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6631#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1056 fasta sequence
[AAGAGCAACAAAGTCCAACACCAGTTCCGGTCGGTAAAGTGATCTCAAACGGGTCTTCTACTGNGGCTAGTCCACAAGGTTCTCTCTTAACAGCCAGCGTAACGTCTAAAGCTGGTGCTAGTCAAACGGATTCGCCGATAAAGGTAACTCCTGGACGTATTAATNTGGCACCGTCTAGTCCTGCAAAGCTGNCAAATGGAAGTATTCCGACGGGTAGTTCTGTGTCGAACGGAANTGCATTCAAAATTAACAGCTTCCAACCGAAATCACCTCCAACAAGCTCTACAAATCAAGATCCAGCTAAGATAACGAACGGAAATTCCTACTCAAACACACTTCCAAGGGCAAATGGAGTATCGGCTTCGAAGGCCACTCCCAAAACATCGACCGGAGCCATTCCGACTACGTACACNTAGCACCGTAAAAGTGTCCATCGGAAGTTTTGGAGATAGTTTGCGNGGAGCCAGCGGTAATCCAAATGCGGGACTACGAAACGGCAATCCTACCAAGTCCTACGAACCACTTACCATCGATACGACATCGAACGGGGGGAGCAAGCACCGCCANATTCGTCGCCAACCACTCCGAAAGAACTGCTGTCGCCACAGGNTACGAAGTGGTGCTGCTTCGATACGGCCGTCACAGATTCGAACCCTTACCAAGGCGGGCAGTGTCGTCAGTCACACGGACATCCTGGAGACGGCCAAACCGGTCAACAAGCTGCCTGTAACGTTGGTCGAACCGGCCCCCGTACTGACTGCTGCTGCTGCCGTATCACCCCCACCGAAGGTGCCCATCGCCAACAACACGGCGCCTCTTCCTTCATCATCACCCGCCAAAGTGGAGCGTACTCCGTTGTTTGAGAAGGCTAACAAAGAGCCACCGAAAAGTTCATTGAATCGGTGGGCTGACAGTAGTAGTAGTAGTGGCAATAGTTCAGTTTCCGGCGGTACAGCACGCAAACTGTTGCTCACACACGGACGACCCAACTTTACGATCAAACGATCCAACTCACGGCAAGGGNTCGATGTGGATGTGGCAGATTCGAAAACCGAT]
[+] EMBL BX621164 [AAGAGCAACAAAGTCCAACACCAGTTCCGGTCGGTAAAGTGATCTCAAACGGGTCTTCTACTGNGGCTAGTCCACAAGGTTCTCTCTTAACAGCCAGCGTAACGTCTAAAGCTGGTGCTAGTCAAACGGATTCGCCGATAAAGGTAACTCCTGGACGTATTAATNTGGCACCGTCTAGTCCTGCAAAGCTGNCAAATGGAAGTATTCCGACGGGTAGTTCTGTGTCGAACGGAANTGCATTCAAAATTAACAGCTTCCAACCGAAATCACCTCCAACAAGCTCTACAAATCAAGATCCAGCTAAGATAACGAACGGAAATTCCTACTCAAACACACTTCCAAGGGCAAATGGAGTATCGGCTTCGAAGGCCACTCCCAAAACATCGACCGGAGCCATTCCGACTACGTACACNTAGCACCGTAAAAGTGTCCATCGGAAGTTTTGGAGATAGTTTGCGNGGAGCCAGCGGTAATCCAAATGCGGGACTACGAAACGGCAATCCTACCAAGTCCTACGAACCACTTACCATCGATACGACATCGAACGGGGGGAGCAAGCACCGCCANATTCGTCGCCAACCACTCCGAAAGAACTGCTGTCGCCACAGGNTACGAAGTGGTGCTGCTTCGATACGGCCGT ]
[+] EMBL BX623406 [ AATCACCTCCAACAAGCTCTACAAATCAAGATCCAGCTAAGATAACGAACGGAAATTCCTACTCAAACACACTTCCAAGGGCAAATGGAGTATCGGCTTCGAAGGCCACTCCCAAAACATCGACCGGAGCCATTCCGACTACGTACAC TAGCACCGTAAAAGTGTCCATCGGAAGTTTTGGAGATAGTTTGCGTGGAGCCAGCGGTAATCCAAATGCGGGACTACGAAACGGCAATCCTACCAAGTCCTACGAACCACTTACCATCGATACGACATCGAAC GGGGGAGCAAGCACCGCCA ATTCGTCGCCAACCACTCCGAAAGAACTGCTGTCGCCACAGG TACGAAGTGGTGCCGCTTCGATACGGCCGTCACAGATTCGAACCCTTACCAAGGCGGGCAGTGTCGTCAGTCACACGGACATCCTGGAGACGGCCAAACCGGTCAACAAGCTGCCTGTAACGTTGGTCGAACCGGCCCCCGTACTGACTGCTGCTGCTGCCGTATCACCCCCACCGAAGGTGCCCATCGCCAACAACACGGCGCCTCTTCCTTCATCATCACCCGCCAAAGTGGAGCGTACTCCGTTGTTTGAGAAGGCTAACAAAGAGCCACCGAAAAGTTCATTGAATCGGTGGGCTGACAGTAGTAGTAGTAGTGGCAATAGTTCAGTTTCCGGCGGTACAGCACGCAAACTGTTGCTCACACACGGACGACCCAACTTTACGATCAAACGATCCAACTCACGGCAAGGGNTCGATGTGGATGTGGCAGATTCGAAAACCGAT]
consensusID : consensus_6631#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 817 fasta sequence
[CNGANGCAGAATCCCTGNGGTTATTACAGCTTCCAACCGAAATCACCTCCAACAAGCTCTACAAATCAAGATCCAGCTAAGATAACGAACGGAAATTCCTACTACAAACACACTTCCAAGGTGCAAATGGAGTATACGGCTTACGAAGTGCCACTCCCAAAACATCGACCGGAGCCATTCCGACTACGTACACTAGCACGTAAAAGTGTCCATCGGAAGTTTTGGAGATAGTTGCGTGGAGCCAGCTGGTTAATCCAAATGCGGGACTACGAAACGGAATCCTACCAAGTCCTACGAACCACTTAACCATCGATACGACATCGAAACGGGGGAGCAACACCTGCCCAATTCNGTTCGGCAACCAAGATCCGAAAGAACTTGCTGTACGCCCACCAGGGTACCNGAAGTTGGGTTGGCCCGCATNTACGATTAACGTGCCCTGTTACACCAGAATTCCGAACACCCCCTTTTAACCAAAGGGGCACGGGCACGTTGTNCTCGTTCCATGTTCACAACTGNGAACACATTCCCTTTGNNAAGGAACCTGGGGGGCCAAAAAACATNACTGGGNTTCCCAACNACAAATGNCCTTTGACCCTTGGTTAACACACTGGTANAGGAGGANCCATGNAAAANACATGGGGATGCCCCACCCCGGAGCTGAACCTTTGGGACGTTGGGCCTNATGGCTTGGANTTCTGACGACCTGGGATGATTTCAATCAGCNCGCCGAACCANGGATANATTGGTTGGGACCCANACATTACCGCGGCACACAAACGANAACCAACCACGGCCNGGCCCTCATTTNACCTTT]
[+] EMBL AL695710 [CNGANGCAGAATCCCTGNGGTTATTACAGCTTCCAACCGAAATCACCTCCAACAAGCTCTACAAATCAAGATCCAGCTAAGATAACGAACGGAAATTCCTACTACAAACACACTTCCAAGGTGCAAATGGAGTATACGGCTTACGAAGTGCCACTCCCAAAACATCGACCGGAGCCATTCCGACTACGTACACTAGCACGTAAAAGTGTCCATCGGAAGTTTTGGAGATAGTTGCGTGGAGCCAGCTGGTTAATCCAAATGCGGGACTACGAAACGGAATCCTACCAAGTCCTACGAACCACTTAACCATCGATACGACATCGAAACGGGGGAGCAACACCTGCCCAATTCNGTTCGGCAACCAAGATCCGAAAGAACTTGCTGTACGCCCACCAGGGTACCNGAAGTTGGGTTGGCCCGCATNTACGATTAACGTGCCCTGTTACACCAGAATTCCGAACACCCCCTTTTAACCAAAGGGGCACGGGCACGTTGTNCTCGTTCCATGTTCACAACTGNGAACACATTCCCTTTGNNAAGGAACCTGGGGGGCCAAAAAACATNACTGGGNTTCCCAACNACAAATGNCCTTTGACCCTTGGTTAACACACTGGTANAGGAGGANCCATGNAAAANACATGGGGATGCCCCACCCCGGAGCTGAACCTTTGGGACGTTGGGCCTNATGGCTTGGANTTCTGACGACCTGGGATGATTTCAATCAGCNCGCCGAACCANGGATANATTGGTTGGGACCCANACATTACCGCGGCACACAAACGANAACCAACCACGGCCNGGCCCTCATTTNACCTTT]
consensusID : consensus_6631#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 696 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGGGGGAGCAAGCACCGCCAATTCGTCGCCAACCACTCCGAAAGAACTGCTGTCGCCACAGGTACGAAGTGGTGCCGCTTCGATACGGCCGTCACAGATTCGAACCCTTACCAAGGCGGGCAGTGTCGTCAGTCACACGGACATCCTGGAGACGGCCAAACCGGTCAACAAGCTGCCTGTAACGTTGGTCGAACCGGCCCCCGTACTGACTGCTGCTGCTGCCGTATCACCCCCACCGAAGGTGCCCATCGCCAACAACACGGCGCCTCTTCCTTCATCATCACCCGCCAAAGTGGAGCGTACTCCGTTGTTTGAGAAGGCTAACAAAGAGCCACCGAAAAGTTCATTGAATCGGTGGGCTGACAGTAGTAGTAGTAGTGGCAATAGTTCAGTTTCCGGCGGTACAGCACGCAAACTGTTGCTCACACACGGACGACCCAACTTTACGATCAAACGATCCAACTCACGGCAAGGGTTCGATGTGGATGTGGCAGATTCGAAAACCGATTCCGCTAAGCCGGTCTTTCGCATTCTAACAGACTTGGAGAAGATGGAACAGCAGGCAGATGAGGGTAACCAAACCGTAGTGACCGGTCCATCGCAACAAGCGTACGTTTCCTTTGCGAAGGATCTTGCGAACGCGCCAAACAACCATCCGGATGTAGTAGTG]
[+] EMBL BM622337 [CCGCCCACGCGTCCGCCCACGCGTCCGGGGGGAGCAAGCACCGCCAATTCGTCGCCAACCACTCCGAAAGAACTGCTGTCGCCACAGGTACGAAGTGGTGCCGCTTCGATACGGCCGTCACAGATTCGAACCCTTACCAAGGCGGGCAGTGTCGTCAGTCACACGGACATCCTGGAGACGGCCAAACCGGTCAACAAGCTGCCTGTAACGTTGGTCGAACCGGCCCCCGTACTGACTGCTGCTGCTGCCGTATCACCCCCACCGAAGGTGCCCATCGCCAACAACACGGCGCCTCTTCCTTCATCATCACCCGCCAAAGTGGAGCGTACTCCGTTGTTTGAGAAGGCTAACAAAGAGCCACCGAAAAGTTCATTGAATCGGTGGGCTGACAGTAGTAGTAGTAGTGGCAATAGTTCAGTTTCCGGCGGTACAGCACGCAAACTGTTGCTCACACACGGACGACCCAACTTTACGATCAAACGATCCAACTCACGGCAAGGGTTCGATGTGGATGTGGCAGATTCGAAAACCGATTCCGCTAAGCCGGTCTTTCGCATTCTAACAGACTTGGAGAAGATGGAACAGCAGGCAGATGAGGGTAACCAAACCGTAGTGACCGGTCCATCGCAACAAGCGTACGTTTCCTTTGCGAAGGATCTTGCGAACGCGCCAAACAACCATCCGGATGTAGTAGTG]
[+] EMBL BX609824 [ ACGTTGGTCGAACCGGCCCCCGTACTGACTGCTGGTGCTGTCGTATCACCCCCACCGAAGGTGCCCATCGCCAACAACACGGCGCCTCTTCCTTCATCATCACCCGCCAAAGTGGAGCGTACTCCGTTGTTTGAGAAGGCTAACAAAGAGCCACCGAAAAGTTCATTGAATCGGTGGGCTGACAGTAGTAGTAGTAGTGGCAATAGTTCAGTTTCCGGCGTTACAGCACGCAAACTGTTGCTCACTCACGGACGACCCAACTTTACGATCAAACGATCCAACTCACGGCAAGGGTTCGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6631#0 AAGAGCAACAAAGTCCAACACCAGTTCCGGTCGGTAAAGTGATCTCAAACGGGTCTTCTA 60
consensus_6631#2 ------------------------------------------------------------
consensus_6631#1 ------------------------------------------------------------
consensus_6631#0 CTGNGGCTAGTCCACAAGGTTCTCTCTTAACAGCCAGCGTAACGTCTAAAGCTGGTGCTA 120
consensus_6631#2 ------------------------------------------------------------
consensus_6631#1 ------------------------------------------------------------
consensus_6631#0 GTCAAACGGATTCGCCGATAAAGGTAACTCCTGGACGTATTAATNTGGCACCGTCTAGTC 180
consensus_6631#2 ------------------------------------------------------------
consensus_6631#1 ------------------------------------------------------------
consensus_6631#0 CTGCAAAGCTGNCAAATGGAAGTATTCCGACGGGTAGTTCTGTGTCGAACGGAANTGCAT 240
consensus_6631#2 ------------------------------------------------------------
consensus_6631#1 ------------------------------------------------------------
consensus_6631#0 TCAAAATTAACAGCTTCCAACCGAAATCACCTCCAACAAGCTCTACAAATCAAGATCCAG 300
consensus_6631#2 ------------------------------------------------------------
consensus_6631#1 ------------------------------------------------------------
consensus_6631#0 CTAAGATAACGAACGGAAATTCCTACTCAAACACACTTCCAAGGGCAAATGGAGTATCGG 360
consensus_6631#2 ------------------------------------------------------------
consensus_6631#1 ------------------------------------------------------------
consensus_6631#0 CTTCGAAGGCCACTCCCAAAACATCGACCGGAGCCATTCCGACTACGTACACNTAGCACC 420
consensus_6631#2 ------------------------------------------------------------
consensus_6631#1 ------------------------------------------------------------
consensus_6631#0 GTAAAAGTGTCCATCGGAAGTTTTGGAGATAGTTTGCGNGGAGCCAGCGGTAATCCAAAT 480
consensus_6631#2 ------------------------------------------------------------
consensus_6631#1 ------------------------------------------------------CNGANG 6
consensus_6631#0 GCGGGACTACGAAACGGCAATCCTACCAAGTCCTACGAACCACTTAC-CA-TCGATACGA 538
consensus_6631#2 ---------------------------------------CCGCCCACGCG-TCCGCCC-A 19
consensus_6631#1 CAGAATCCCTGNGGTTATTACAGCTTCCAACCGAAATCACCTCCAACAAGCTCTACAAAT 66
** * ** **
consensus_6631#0 CATCGAACGGGGGGAGCAAGCACCGCCANATTC-GTCGCCAAC-CACTCCGAAAGAACTG 596
consensus_6631#2 CG-CGTCCGGGGGGAGCAAGCACCGCCAA-TTC-GTCGCCAAC-CACTCCGAAAGAACTG 75
consensus_6631#1 CAAGATCCAGCTAAGATAACGAACGGAAATTCCTACTACAAACACACTTCCAAGGTGCAA 126
* * * ** * ** * * * * *** **** * ** * *
consensus_6631#0 CTGTCGC-CACAGGNTACGAAGTGGTGCTGCTTCGATA-CGGCCGTCACAGATTCGAACC 654
consensus_6631#2 CTGTCGC-CACAGGT-ACGAAGTGGTGCCGCTTCGATA-CGGCCGTCACAGATTCGAACC 132
consensus_6631#1 ATGGAGTATACGGCTTACGAAGTGCCACTCCCAAAACATCGACCGGAGCCATTCCGACTA 186
** * ** * ******** * * * * ** *** * * ***
consensus_6631#0 CTTACCAAGGCGGGCAGTGTCGTCAGTCACACGGACATCCTGGAGACGGCCAAACCG-GT 713
consensus_6631#2 CTTACCAAGGCGGGCAGTGTCGTCAGTCACACGGACATCCTGGAGACGGCCAAACCG-GT 191
consensus_6631#1 CGTACACTAGCACGTAAAAGTGTCCATC----GGAAGTTTTGGAGATAGTTGCGTGGAGC 242
* *** ** * * *** ** *** * ****** * * *
consensus_6631#0 CAACAAGCTGCCTGTAACGTTGGTC---GAACCGGCCCCCGTACTGACTGCTGCTGCTGC 770
consensus_6631#2 CAACAAGCTGCCTGTAACGTTGGTC---GAACCGGCCCCCGTACTGACTGCTGCTGCTGC 248
consensus_6631#1 CAGCTGGTTAATCCAAATGCGGGACTACGAAACGGAATCC-TACCAAGTCCTACGA--AC 299
** * * * ** * ** * *** *** ** *** * * ** * *
consensus_6631#0 CGTATCACCCCCACCGAAGGTGCCCATCGCCAACAACACGGCGCCTCTTCCTTCATCATC 830
consensus_6631#2 CGTATCACCCCCACCGAAGGTGCCCATCGCCAACAACACGGCGCCTCTTCCTTCATCATC 308
consensus_6631#1 CACTTAACC---ATCGATACGACATCGAAACGGGGGAGCAACACCTGCCCAATTCNGTTC 356
* * *** * *** * * * * *** * * **
consensus_6631#0 ACCCGCCAAAGTGGAGCGTACTCCGTTGTTTG---AGAAGGCTAACAAAGAGCCA-CCGA 886
consensus_6631#2 ACCCGCCAAAGTGGAGCGTACTCCGTTGTTTG---AGAAGGCTAACAAAGAGCCA-CCGA 364
consensus_6631#1 GGCAACCAAGATCCGAAAGAACTTGCTGTACGCCCACCAGGGTACCNGAAGTTGGGTTGG 416
* **** * * * *** * * *** ** * * *
consensus_6631#0 AAAGTTCATTGAATCGGTGGGCTGACAGTAGTAGTAGTAGTGGCAATAGTTCAGTTTCCG 946
consensus_6631#2 AAAGTTCATTGAATCGGTGGGCTGACAGTAGTAGTAGTAGTGGCAATAGTTCAGTTTCCG 424
consensus_6631#1 CCCGCATNTACGATTAACGTGCC--CTGTTACACCAG-AATTCCGAACACCCCCTTTTAA 473
* * ** * ** * ** * ** * * * * * ***
consensus_6631#0 GCGGTACAGCACGCAAACTGTTGCTCACACACGGACGACCCAACTTTACGATCAAACGAT 1006
consensus_6631#2 GCGGTACAGCACGCAAACTGTTGCTCACACACGGACGACCCAACTTTACGATCAAACGAT 484
consensus_6631#1 CCAAAGGGGCACGGGCAC-GTTGTNCTCGTTCCATGTTCACAACTGNGAACACATTCCCT 532
* ***** ** **** * * * * ***** ** * *
consensus_6631#0 CCAACTCACGGC--AAGGGNTCGATGTGGATG--TGGCAGATTCGAAAACCGAT------ 1056
consensus_6631#2 CCAACTCACGGC--AAGGGTTCGATGTGGATG--TGGCAGATTCGAAAACCGATTCCGCT 540
consensus_6631#1 TTGNNAAGGAACCTGGGGGGCCAAAAAACATNACTGGGNTTCCCAACNACAAATGNCCTT 592
* *** * * ** *** * * ** **
consensus_6631#0 ------------------------------------------------------------
consensus_6631#2 AAGCCGGTCTTTCGCATTCTAACAGACTTGGAGAAGATGGAACAGCAGGCAGATGAGGGT 600
consensus_6631#1 TGACCCTTGGTTAACACACTGGTANAGGAGGANCCATGNAAAANACATGGGGATGCCCCA 652
consensus_6631#0 ------------------------------------------------------------
consensus_6631#2 AACCAAACCGTAGTGACCGGTCCATCGCAACAA---GCGTACGTTTCCTTTG-CGAAGGA 656
consensus_6631#1 CCCCGGAGCTGAACCTTTGGGACGTTGGGCCTNATGGCTTGGANTTCTGACGACCTGGGA 712
consensus_6631#0 ------------------------------------------------------------
consensus_6631#2 TCTTGCGAACGCGCCAAACAACCATCCGGATGTAGTAGTG-------------------- 696
consensus_6631#1 TGATTTCAATCAGCNCGCCGAAC-CANGGATANATTGGTTGGGACCCANACATTACCGCG 771
consensus_6631#0 ----------------------------------------------
consensus_6631#2 ----------------------------------------------
consensus_6631#1 GCACACAAACGANAACCAACCACGGCCNGGCCCTCATTTNACCTTT 817
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||