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Anopheles gambiae
cluster # 6642 cluster # 6642       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6642#0 length = 1522 sequences # 3  
consensus_6642#1 length = 731 sequences # 1  
consensus_6642#2 length = 603 sequences # 1  

consensusID : consensus_6642#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1522
fasta sequence
                              [CCGCAGGAACGCACTGTGAAGAAAGCAAAGGAAGAAAAGGTTTCGGTTCGCTCTGGCAAAATTAAATCGAAGGTATCGAAAAAGAAAGCGAAAGCTTCCGCCATAGACCAGCCCGGTTCGAAACAGGAAAAAGAGCTTATGTCGCTTGTATTCGGTGGCAAGGAGGAGCTCGTATCGAACTTAACTAAATCGGAAAAGAAAAGAGACAAAACCGACCCGGCACAGGGCGGAAAGAAGAAGCAAGCAAAGCAAACACCCAAAAAACGGCGCGCCGTCTGGCACGATTCAGACGACGACGATGAGGAAGATACGGTCAACATGAAGCGCAACAAGTTCACCTACGACGAGCTGCCGGAACAGCTGACCAAGGAGCGCCGGCGTAAGCAGTTCGAGCAGATCGTGGGCCAACCAAAGTGGGCCGATCTGGATCGCGTCCGCGAGCCCGATTCCGACGAGGAGATGCTGCAGACGGTCGGGCATGTCGTGAAGGGTGCAGCGACGTCCCAGGGCCTGCCGAAGGGTATGATCGAGCTGAAGAAGCTGAAAAATCTGAACCGCGAAACGAAGATCGAAGGCAAAATCTCCTGCATCAACTTCCATCCGACGTCGATGGTGGCGATGATGACGGGGGAACCGGGGTCTGGTGTCGATCGTCGCAGTGGATGGCGTGCGCAACGAGAAGCTGCACACGCTCTGGCTGCAGAAGGTGCGGATCAGCTGCAGCCGGCTGTCGCCGGACGGGAACGAGGCGATCTTCGGCAGCTATCGGAAGTTCTTCCACGTGTACAACCTGCTCAGCGGTCAGAGCGATACGCTGAAAATACCCGAGCGCGACACGTGGCAGATGAAGAACTTTCGCATTTCGCGCTGCGGCAAGTACCTGGCGTCCGTCGGCGAATGTGGCGAGGTGCATCTGATGGACGCGAGAACGAAGGATGTGCTGCAAACGATCCAGCTGCGCTACACGTGCCAGTCGTTGGCGTTTACGCCCGACTCGCGGTACCTGCTGTGCCACAGCAACGATACGGAGGTGAGCGTGTTCAGCCTGGAGCAGAAGCGGATAGTGAACGTGTTCCAGGACGAAGGGTGCGTTAATGGGTCATGTATAGCGATCTGCCCGAATGGGCAGTTTGTGGCGACCGGCAGTCGACAGGGGATTGTTAATCTGTACACGCTGGAGGTTACACTGACGGAGAAGCAACCGGTACCGGTGAAGACGTTCAACAATTTGACCACGTACATCGATTCGCTCGCGTTCAATGCGACCTCGGAGTTGCTGGTGATCGCGTCGTCGACCGTAAAGAATGCGGTCAGGCTGATTCACGTCAAGAGCAGAACGGNGTTCCGCAACTTCCCACTGCACATGACACATCTGGGACACGTGAGTGCGGCCGAATTTTCTCCCTTGGGAGGATATTTAGCGCTGGGCACGAAGCAAAGCACTGTGCTGCTGTTCAGAGTGAAGCATTACCCTAACTATTGAGTATCGGTCAATAAAGCTAATGGCACGACAACTGTTTAC]

[+] EMBL BM624167             [CCGCAGGAACGCACTGTGAAGAAAGCAAAGGAAGAAAAGGTTTCGGTTCGCTCTGGCAAAATTAAATCGAAGGTATCGAAAAAGAAAGCGAAAGCTTCCGCCATAGACCAGCCCGGTTCGAAACAGGAAAAAGAGCTTATGTCGCTTGTATTCGGTGGCAAGGAGGAGCTCGTATCGAACTTAACTAAATCGGAAAAGAAAAGAGACAAAACCGACCCGGCACAGGGCGGAAAGAAGAAGCAAGCAAAGCAAACACCCAAAAAACGGCGCGCCGTCTGGCACGATTCAGACGACGACGATGAGGAAGATACGGTCAACATGAAGCGCAACAAGTTCACCTACGACGAGCTGCCGGAACAGCTGACCAAGGAGCGCCGGCGTAAGCAGTTCGAGCAGATCGTGGGCCAACCAAAGTGGGCCGATCTGGATCGCGTCCGCGAGCCCGATTCCGACGAGGAGATGCTGCAGACGGTCGGGCATGTCGTGAAGGGTGCAGCGACGTCCCAGGGCCTGCCGAAGGGTATGATCGAGCTGAAGAAGCTGAAAAATCTGAACCGCGAAACGAAGATCGAAGGCAAAATCTCCTGCATCAACTTCCATCCGACGTCGATGGTGGCGATGATGACGGGGGAACCGGGGTCTGGTGTCGATCGTCGCAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX624924             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTGCATCAACTTTCATCCGACGTCGATGGTGGCGATGATGAC GGGGAACCGGGGCCTGGTGTCGATCGTCGCAGTGGATGGCGTGCGCAACGAGAAGCTGCACACGCTCTGGCTGCAGAAGGTGCGGATCAGCTGCAGCCGGCTGTCGCCGGACGGGAACGAGGCGATCTTCGGCAGCTATCGGAAGTTCTTCCACGTGTACAACCTGCTCAGCGGTCAGAGCGATACGCTGAAAATACCCGAGCGCGACACGTGGCAGATGAAGAACTTTCGCATTTCGCGCTGCGGCAAGTACCTGGCGTCCGTCGGCGAATGTGGCGAGGTGCATCTGATGGACGCGAGAACGAAGGATGTGCTGCAAACGATCCAGCTGCGCTACACGTGCCAGTCGTTGGCGTTTACGCCCGACTCGCGGTACCTGCTGTGCCACAGCAACGATACGGAGGTGAGCGTGTTCAGCCTGGAGCAGAAGCGGATAGTGAACGTGTTCCAGGACGAAGGGTGCGTTAATGGGTCATGTATAGCGATCTGCCCGAATGGGCAGTTTGTGGCGACCGGCAGTCGACAGGGGATTGTTAATCTGTACACGCTGGAGGTTACACTGACGGAGAAGCAACCGGTACCGGTGAAGACGTTCAACAATTTGACCACGTACATCGATTCGCTCGCGTTCAATGCGACCTCGGAGTTGCTGGTGATCGCGTCGTCGACCGTAAAGAATGCGGTCAGGCTGATTCACGTCAAGAGCAGAACGGNGTTCCGCAACTTCCCACTGCACATGACACAT                                                                                                                                                      ]
[+] EMBL BX623609             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTGCATCTGATGGACGCGAGAACGAAGGATGTGCTGCAAACGATCCAGCTGCGCTACACGTGCCAGTCGTTGGCGTTTACGCCCGACTCGCGGTACCTGCTGTGCCACAGCAACGATACGGAGGTGAGCGTGTTCAGCCTGGAGCAGAAGCGGATAGTGAACGTGTTCCAGGACGAAGGGTGCGTTAATGGGTCATGTATAGCGATCTGCCCGAATGGGCAGTTTGTGGCGACCGGCAGTCGACAGGGGATTGTTAATCTGTACACGCTGGAGGTTACACTGACGGAGAAGCAACCGGTACCGGTGAAGACGTTCAACAATTTGACCACGTACATCGATTCGCTCGCGTTCAATGCGACCTCGGAGTTGCTGGTGATCGCGTCGTCGACCGTAAAGAATGCGGTCAGGCTGATTCACGTCAAGAGCAGAACGGTGTTCCGCAACTTCCCACTGCACATGACACATCTGGGACACGTGAGTGCGGCCGAATTTTCTCCCTTGGGAGGATATTTAGCGCTGGGCACGAAGCAAAGCACTGTGCTGCTGTTCAGAGTGAAGCATTACCCTAACTATTGAGTATCGGTCAATAAAGCTAATGGCACGACAACTGTTTAC]


>consensus_6642#0 CCGCAGGAACGCACTGTGAAGAAAGCAAAGGAAGAAAAGGTTTCGGTTCGCTCTGGCAAA ATTAAATCGAAGGTATCGAAAAAGAAAGCGAAAGCTTCCGCCATAGACCAGCCCGGTTCG AAACAGGAAAAAGAGCTTATGTCGCTTGTATTCGGTGGCAAGGAGGAGCTCGTATCGAAC TTAACTAAATCGGAAAAGAAAAGAGACAAAACCGACCCGGCACAGGGCGGAAAGAAGAAG CAAGCAAAGCAAACACCCAAAAAACGGCGCGCCGTCTGGCACGATTCAGACGACGACGAT GAGGAAGATACGGTCAACATGAAGCGCAACAAGTTCACCTACGACGAGCTGCCGGAACAG CTGACCAAGGAGCGCCGGCGTAAGCAGTTCGAGCAGATCGTGGGCCAACCAAAGTGGGCC GATCTGGATCGCGTCCGCGAGCCCGATTCCGACGAGGAGATGCTGCAGACGGTCGGGCAT GTCGTGAAGGGTGCAGCGACGTCCCAGGGCCTGCCGAAGGGTATGATCGAGCTGAAGAAG CTGAAAAATCTGAACCGCGAAACGAAGATCGAAGGCAAAATCTCCTGCATCAACTTCCAT CCGACGTCGATGGTGGCGATGATGACGGGGGAACCGGGGTCTGGTGTCGATCGTCGCAGT GGATGGCGTGCGCAACGAGAAGCTGCACACGCTCTGGCTGCAGAAGGTGCGGATCAGCTG CAGCCGGCTGTCGCCGGACGGGAACGAGGCGATCTTCGGCAGCTATCGGAAGTTCTTCCA CGTGTACAACCTGCTCAGCGGTCAGAGCGATACGCTGAAAATACCCGAGCGCGACACGTG GCAGATGAAGAACTTTCGCATTTCGCGCTGCGGCAAGTACCTGGCGTCCGTCGGCGAATG TGGCGAGGTGCATCTGATGGACGCGAGAACGAAGGATGTGCTGCAAACGATCCAGCTGCG CTACACGTGCCAGTCGTTGGCGTTTACGCCCGACTCGCGGTACCTGCTGTGCCACAGCAA CGATACGGAGGTGAGCGTGTTCAGCCTGGAGCAGAAGCGGATAGTGAACGTGTTCCAGGA CGAAGGGTGCGTTAATGGGTCATGTATAGCGATCTGCCCGAATGGGCAGTTTGTGGCGAC CGGCAGTCGACAGGGGATTGTTAATCTGTACACGCTGGAGGTTACACTGACGGAGAAGCA ACCGGTACCGGTGAAGACGTTCAACAATTTGACCACGTACATCGATTCGCTCGCGTTCAA TGCGACCTCGGAGTTGCTGGTGATCGCGTCGTCGACCGTAAAGAATGCGGTCAGGCTGAT TCACGTCAAGAGCAGAACGGNGTTCCGCAACTTCCCACTGCACATGACACATCTGGGACA CGTGAGTGCGGCCGAATTTTCTCCCTTGGGAGGATATTTAGCGCTGGGCACGAAGCAAAG CACTGTGCTGCTGTTCAGAGTGAAGCATTACCCTAACTATTGAGTATCGGTCAATAAAGC TAATGGCACGACAACTGTTTAC



consensusID : consensus_6642#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 731
fasta sequence
                              [GCAAGAATTCCCGAGGTTAAGCTGCAACAAGTTCACCTACGACGAGCTGCCGGAACAGCTGACGAAGTGAGCGCCGGTGTAAGCAGTTCTGAGCAGATCGTGGGTCAACCAAAGTGGGCCGATCTGGATATGCGTACCGCGAGCCCGATTCCGACGAGGAGATGCTGCAGACGGTCGGGCACGTCGTGAAGGGTTGCCGGGGCGTCCCAGGGGCCTTGCCCAANGGGTATTGATACGAGCTGAAAGAAGCTTGACAAAATCTGAACCGGAACACGGAACGATACGAAGGGCAAAAATCTACCTTGCAATCAAAGCTTTTCATCCCGAAGACTTCCGCAGTGGTTAGGCCGATGAATAGGAACAGGTGACAAACCTGTANGCCCTTGATCGTACGNATCCGGTCCCACAAGTCGGGCATNGGCCGGTGCCCGCAACACGGAGGAAAGCTTNGCAGCACGGCTCCTTGGGGANTTTGGCACACGGAAAAAGGAGGGTTTGGANCGNGGGGAATTACCCAAGACGCTTGGGCGCACAGATCACCCCGAGCGTACANTTTGGTTAACCGGNCCCTGTGGAACCCGAGNNGNGAGACAAACNCGGCAAAGTGGGNCNCGCGAACTTACCCTTCTACCCCNNGGGCACACGCGCCTTTAATTCNCNNGGCNAACAAGNTATACCTATAAANACCCACAGNGNGTTTGGTATAAACACACAAGCACTTATGGCTAACC]

[+] EMBL AL696155             [GCAAGAATTCCCGAGGTTAAGCTGCAACAAGTTCACCTACGACGAGCTGCCGGAACAGCTGACGAAGTGAGCGCCGGTGTAAGCAGTTCTGAGCAGATCGTGGGTCAACCAAAGTGGGCCGATCTGGATATGCGTACCGCGAGCCCGATTCCGACGAGGAGATGCTGCAGACGGTCGGGCACGTCGTGAAGGGTTGCCGGGGCGTCCCAGGGGCCTTGCCCAANGGGTATTGATACGAGCTGAAAGAAGCTTGACAAAATCTGAACCGGAACACGGAACGATACGAAGGGCAAAAATCTACCTTGCAATCAAAGCTTTTCATCCCGAAGACTTCCGCAGTGGTTAGGCCGATGAATAGGAACAGGTGACAAACCTGTANGCCCTTGATCGTACGNATCCGGTCCCACAAGTCGGGCATNGGCCGGTGCCCGCAACACGGAGGAAAGCTTNGCAGCACGGCTCCTTGGGGANTTTGGCACACGGAAAAAGGAGGGTTTGGANCGNGGGGAATTACCCAAGACGCTTGGGCGCACAGATCACCCCGAGCGTACANTTTGGTTAACCGGNCCCTGTGGAACCCGAGNNGNGAGACAAACNCGGCAAAGTGGGNCNCGCGAACTTACCCTTCTACCCCNNGGGCACACGCGCCTTTAATTCNCNNGGCNAACAAGNTATACCTATAAANACCCACAGNGNGTTTGGTATAAACACACAAGCACTTATGGCTAACC]


>consensus_6642#1 GCAAGAATTCCCGAGGTTAAGCTGCAACAAGTTCACCTACGACGAGCTGCCGGAACAGCT GACGAAGTGAGCGCCGGTGTAAGCAGTTCTGAGCAGATCGTGGGTCAACCAAAGTGGGCC GATCTGGATATGCGTACCGCGAGCCCGATTCCGACGAGGAGATGCTGCAGACGGTCGGGC ACGTCGTGAAGGGTTGCCGGGGCGTCCCAGGGGCCTTGCCCAANGGGTATTGATACGAGC TGAAAGAAGCTTGACAAAATCTGAACCGGAACACGGAACGATACGAAGGGCAAAAATCTA CCTTGCAATCAAAGCTTTTCATCCCGAAGACTTCCGCAGTGGTTAGGCCGATGAATAGGA ACAGGTGACAAACCTGTANGCCCTTGATCGTACGNATCCGGTCCCACAAGTCGGGCATNG GCCGGTGCCCGCAACACGGAGGAAAGCTTNGCAGCACGGCTCCTTGGGGANTTTGGCACA CGGAAAAAGGAGGGTTTGGANCGNGGGGAATTACCCAAGACGCTTGGGCGCACAGATCAC CCCGAGCGTACANTTTGGTTAACCGGNCCCTGTGGAACCCGAGNNGNGAGACAAACNCGG CAAAGTGGGNCNCGCGAACTTACCCTTCTACCCCNNGGGCACACGCGCCTTTAATTCNCN NGGCNAACAAGNTATACCTATAAANACCCACAGNGNGTTTGGTATAAACACACAAGCACT TATGGCTAACC



consensusID : consensus_6642#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 603
fasta sequence
                              [GCCCAGGTCTTAATATTGTGGCGATGATGACGGGAACTGGGGCCTGGTGTCGATCGTCGCAGTGGATTGCTGTGCTGCAACGAGAAGCTGCACACGCTCTGGCTGCAGAAGTGTGCGGATCAGCTGCAGCCGGCTGTCGCCGGACGGGAACGAGGCGATCTTCGGCAGCTATCGGAAGTTCTTCCACGTGTACAACCTGCTCAGCGGTCAGAGCGATACGCTGAAAATACCCGAGTGCGACACGTGGCAGATGTAAGAACTTTCGCATTTCGCGCTGACGGCCANAGTACCTGGCGTCCGTCNGGCGAATGTTGGCGAGTGTGCATCTGATGGACGCGAAGAACGGAAGGATTGTGCTTGCAANACGATCCAGGCCTGCGACTACACGTGGCAGTCGATTGGCGTTTACTGCCCGACTCGCGGTACCTTGCTGTGCGCACAGNNNGAAACGGATACGGAGGTGAGCGTGTTCAGCCCTGGANGCATCAACGCGTGATTAGTTGNAACGTGTNCCAAGCGACAGTAANGTGGCTAGCGGCTATACTNGGGGATCATNGTAGTTAGCCGATACTTGGCCCCGAAATGATACCAGATNGATGCGCG]

[+] EMBL AL695755             [GCCCAGGTCTTAATATTGTGGCGATGATGACGGGAACTGGGGCCTGGTGTCGATCGTCGCAGTGGATTGCTGTGCTGCAACGAGAAGCTGCACACGCTCTGGCTGCAGAAGTGTGCGGATCAGCTGCAGCCGGCTGTCGCCGGACGGGAACGAGGCGATCTTCGGCAGCTATCGGAAGTTCTTCCACGTGTACAACCTGCTCAGCGGTCAGAGCGATACGCTGAAAATACCCGAGTGCGACACGTGGCAGATGTAAGAACTTTCGCATTTCGCGCTGACGGCCANAGTACCTGGCGTCCGTCNGGCGAATGTTGGCGAGTGTGCATCTGATGGACGCGAAGAACGGAAGGATTGTGCTTGCAANACGATCCAGGCCTGCGACTACACGTGGCAGTCGATTGGCGTTTACTGCCCGACTCGCGGTACCTTGCTGTGCGCACAGNNNGAAACGGATACGGAGGTGAGCGTGTTCAGCCCTGGANGCATCAACGCGTGATTAGTTGNAACGTGTNCCAAGCGACAGTAANGTGGCTAGCGGCTATACTNGGGGATCATNGTAGTTAGCCGATACTTGGCCCCGAAATGATACCAGATNGATGCGCG]


>consensus_6642#2 GCCCAGGTCTTAATATTGTGGCGATGATGACGGGAACTGGGGCCTGGTGTCGATCGTCGC AGTGGATTGCTGTGCTGCAACGAGAAGCTGCACACGCTCTGGCTGCAGAAGTGTGCGGAT CAGCTGCAGCCGGCTGTCGCCGGACGGGAACGAGGCGATCTTCGGCAGCTATCGGAAGTT CTTCCACGTGTACAACCTGCTCAGCGGTCAGAGCGATACGCTGAAAATACCCGAGTGCGA CACGTGGCAGATGTAAGAACTTTCGCATTTCGCGCTGACGGCCANAGTACCTGGCGTCCG TCNGGCGAATGTTGGCGAGTGTGCATCTGATGGACGCGAAGAACGGAAGGATTGTGCTTG CAANACGATCCAGGCCTGCGACTACACGTGGCAGTCGATTGGCGTTTACTGCCCGACTCG CGGTACCTTGCTGTGCGCACAGNNNGAAACGGATACGGAGGTGAGCGTGTTCAGCCCTGG ANGCATCAACGCGTGATTAGTTGNAACGTGTNCCAAGCGACAGTAANGTGGCTAGCGGCT ATACTNGGGGATCATNGTAGTTAGCCGATACTTGGCCCCGAAATGATACCAGATNGATGC GCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6642#0      CCGCAGGAACGCACTGTGAAGAAAGCAAAGGAAGAAAAGGTTTCGGTTCGCTCTGGCAAA 60
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      ATTAAATCGAAGGTATCGAAAAAGAAAGCGAAAGCTTCCGCCATAGACCAGCCCGGTTCG 120
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      AAACAGGAAAAAGAGCTTATGTCGCTTGTATTCGGTGGCAAGGAGGAGCTCGTATCGAAC 180
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      TTAACTAAATCGGAAAAGAAAAGAGACAAAACCGACCCGGCACAGGGCGGAAAGAAGAAG 240
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      CAAGCAAAGCAAACACCCAAAAAACGGCGCGCCGTCTGGCACGATTCAGACGACGACGAT 300
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      GAGGAAGATACGGTCAACATGAAGCGCAACAAGTTCACCTACGACGAGCTGCCGGAACAG 360
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      CTGACCAAGGAGCGCCGGCGTAAGCAGTTCGAGCAGATCGTGGGCCAACCAAAGTGGGCC 420
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      GATCTGGATCGCGTCCGCGAGCCCGATTCCGACGAGGAGATGCTGCAGACGGTCGGGCAT 480
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      GTCGTGAAGGGTGCAGCGACGTCCCAGGGCCTGCCGAAGGGTATGATCGAGCTGAAGAAG 540
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      CTGAAAAATCTGAACCGCGAAACGAAGATCGAAGGCAAAATCTCCTGCATCAACTTCCAT 600
consensus_6642#2      ----------------------------------------------------GCCCAGGT 8
consensus_6642#1      ----------------------------GCAAGAATTCCCGAGGTTAAGCTGCAACAAGT 32
                                                                                 *

consensus_6642#0      CCGACGTCGATG-GTGGCGATGATGACGGGGGAACCGGGGTCTGGTGTCGATCGTCGC-A 658
consensus_6642#2      CTTAA---TATT-GTGGCGATGATGACGGG--AACTGGGGCCTGGTGTCGATCGTCGC-A 61
consensus_6642#1      TCACCTACGACGAGCTGCCGGAACAGCTGACGAAGTGAGCGCCGGTGTAAGCAGTTCTGA 92
                               *   *  **    *   * *   **  * *  * *****     **    *

consensus_6642#0      GTGGATGGC-GTGC-GCAACGAGAAGCTGCACACGCTCTGGCTGCAGAAG-GTGCGGATC 715
consensus_6642#2      GTGGATTGCTGTGCTGCAACGAGAAGCTGCACACGCTCTGGCTGCAGAAGTGTGCGGATC 121
consensus_6642#1      GCAGATCGTGGGTCAACCAAAGTGGGCCGATCTGGATATGCGTACCGCGA-GCCCGATTC 151
                      *  *** *  *  *  * *      ** *  *  * * **  * * *    *  **  **

consensus_6642#0      AGCTGCAGCCG-GCTGTCGCCGGACGGGAACGAGGCGA----TCTTCGGCAGCTATCGGA 770
consensus_6642#2      AGCTGCAGCCG-GCTGTCGCCGGACGGGAACGAGGCGA----TCTTCGGCAGCTATCGGA 176
consensus_6642#1      CGACGAGGAGATGCTGCAGACGGTCGGGCACGTCGTGAAGGGTTGCCGGGGCGTCCCAGG 211
                       *  *  *    ****  * *** **** ***  * **    *   ***    *  * * 

consensus_6642#0      AGTTCTTCCACGTGTACAACCTGCTCAGCGGTCAGAGCGATACGCTGAAAAT---ACCCG 827
consensus_6642#2      AGTTCTTCCACGTGTACAACCTGCTCAGCGGTCAGAGCGATACGCTGAAAAT---ACCCG 233
consensus_6642#1      GGCCTTGCCCAANGGGTA--TTGATACGAGCTGAAAGAAGCTTGACAAAATCTGAACCGG 269
                       *   * **    *   *   ** *  * * * * **      *   ***     *** *

consensus_6642#0      AGCGCGACACGTGGCAGATG--AAGAACTT---TCGCATTTCGCGCTG--CGGC--AAGT 878
consensus_6642#2      AGTGCGACACGTGGCAGATGT-AAGAACTT---TCGCATTTCGCGCTGA-CGGCCANAGT 288
consensus_6642#1      AACACGGAACGATACGAAGGGCAAAAATCTACCTTGCAATCAAAGCTTTTCATCCCGAAG 329
                      *   **  ***   *  * *  ** **  *   * *** *    ***   *  *   *  

consensus_6642#0      ACCT-----GGCGTCCGTCGG-CGAATGT-GGCGAG-GTGCATCTGATGGACGCGA-GAA 929
consensus_6642#2      ACCT-----GGCGTCCGTCNGGCGAATGTTGGCGAGTGTGCATCTGATGGACGCGAAGAA 343
consensus_6642#1      ACTTCCGCAGTGGTTAGGCCGATGAATAGGAACAGGTGACAAACCTGTANGCCCTT-GAT 388
                      ** *     *  **  * * *  ****     *  * *   * *   *   * *   ** 

consensus_6642#0      CGAAGGA---TGTGCT-GCAAA-CGATCCAG--CTGCG-CTACACGTGCCAGTCG-TTGG 980
consensus_6642#2      CGGAAGGAT-TGTGCTTGCAANACGATCCAGGCCTGCGACTACACGTGGCAGTCGATTGG 402
consensus_6642#1      CGTACGNATCCGGTCCCACAAGTCGGGCATNG---GCCGGTGCCCGCAACACGGAGGAAA 445
                      ** * *     *  *   ***  **  *       **   * * **   **         

consensus_6642#0      CGTTTAC-GCCCGACTCGCGGTACCT-GCTGTGC-CACAGCAAC-----GATACGGAGGT 1032
consensus_6642#2      CGTTTACTGCCCGACTCGCGGTACCTTGCTGTGCGCACAGNNNGAAACGGATACGGAGGT 462
consensus_6642#1      GCTTNGCAGCACGGCTCCTTGGGGAN--TTTGGCACACGGAAAAAGGAGGGTTTGGAN-C 502
                        **  * ** ** ***   *        *  ** *** *         * *  ***   

consensus_6642#0      GAGCGTGTTCAGCCTGGAGCAGAAGCGGATAGTGAACGTGT-TCCAGGACGAAGGGTGCG 1091
consensus_6642#2      GAGCGTGTTCAGCCC----TGGANGC-----ATCAACGCGT-GATTAGTTGNAACGTGTN 512
consensus_6642#1      GNGGGGAATTACCCA-----AGACGC-----TTGGGCGCACAGATCACCCCGAGCGTACA 552
                      * * *   * * **       ** **      *   **              *  **   

consensus_6642#0      TTAATGGGTCATG-TATAGCGATCTGCCCGAATGGGCAGT--TTGTGGCGA-CCGGCAGT 1147
consensus_6642#2      CCAAGCGACAGTAANGTGGCTAGCGGCTATACTNGGGGATCATNGTAGTTAGCCGATACT 572
consensus_6642#1      NTTTGGTTAACCGGNCCCTGTGGAACCCGAGNNGNGAGACAAACNCGGCAAAGTGGGNCN 612
                                                *        *           *  *   *     

consensus_6642#0      CG--ACAGGGGATTGTTAATCTGTAC--ACGCTGGAGGTTACACTGACGGAGAAGCAACC 1203
consensus_6642#2      TG--GCCCCGAAATGATACCAGATNG--ATGCGCG------------------------- 603
consensus_6642#1      CGCGAACTTACCCTTCTACCCCNNGGGCACACGCGCCTTTAATTCNCNNGGCNAACAAGN 672
                       *           *  **          *  *  *                         

consensus_6642#0      GGTACCGGTGAAGACGTTCAACAATTTGACCACGTACATCGATTCGCTCGCGTTCAATGC 1263
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      TATACCTATAAANACCCACAGNGNGTTTGGTATAAACACACAAGCACTTATGGCTAACC- 731
                                                                                  

consensus_6642#0      GACCTCGGAGTTGCTGGTGATCGCGTCGTCGACCGTAAAGAATGCGGTCAGGCTGATTCA 1323
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      CGTCAAGAGCAGAACGGNGTTCCGCAACTTCCCACTGCACATGACACATCTGGGACACGT 1383
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      GAGTGCGGCCGAATTTTCTCCCTTGGGAGGATATTTAGCGCTGGGCACGAAGCAAAGCAC 1443
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      TGTGCTGCTGTTCAGAGTGAAGCATTACCCTAACTATTGAGTATCGGTCAATAAAGCTAA 1503
consensus_6642#2      ------------------------------------------------------------
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      TGGCACGACAACTGTTTAC 1522
consensus_6642#2      -------------------
consensus_6642#1      -------------------
                                         




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)