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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6648#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1219 fasta sequence
[ATTGGGGAATCTTGTTGCAAAGTGACGCAGTTCAATTGATACTCAGTGGTTTTTGATACAGTTCAATTAGAAGGTGCACAAAGTTCTGGATTTGTAATACGGTGCAGCATAAGTGAGTGGTTCTGTGAAGTTGAAAACGGCCAAGCAAAGGTTAATTATTACCCTGCAACCCTCCAGATCTCGTCCAGCATGTTACATACACGCACGATTGCTCTGCTGCTGGTGGGGCTAGTGGTGCTAGTGAATGCCCAAACGTTTCAGTACTCCCGTGGATGGACAAATGGGAAGCGTTCGCCGTTGTCTTCATCATCGTCTTCACCATCATCCTCGGCTGCAATGGAACCTTTAACTGCAAATCAGCTGCTGGCCTCTGCTCTGTCCTCTGGGGGATTAAACTCTTTAAAACCTAGTGAAAAAGCGCTCCTACGACGCTTTTTGCGGAACCCGTGCGATCTTCGTGTGGCCAGCTTATTGGCCGCTGCCCACCCAACCAAAGAGCTGTTTCCACTGGCCGGCAACAGCTTTGACAGTGCGGAATCAGCCGGAGCCGCATTCGTGCTGCCACCTTTCCTAATGGATCCCGACGAAAGCAACGGTGGCATCGGTGGCAGCAATTTGGCCAACGGTCGCTCGATGGAGGACGAGCTGCGCTTCAAGCGCGGTACGGCCACCGGTTTTAGTGATCATCGTCAGAAAATTGCTTAAAACAGTCCCCGCTATATCCGTTATCACATGCCCGTCATCACATGCCGCCAGACATCAGAGTCAGTCAGTCAGTCAGTCACGTCGGGGTGGTCGGAGGAAGAGCGTAAATCAGCGGAAACAGGTGCTACGCTTCAGGATGGTGTCCACGTGGCGGTAATTGTTCTCGAGACGCATCCTTGAAGAGCTTCAGCAGGGGCAGAAGCAGCACCAGCAGCCGCACGTCAAGAGCAAGAAACGATGATTTAATAATGATTCGCGTCGAAGGCAGGAAAAAAGGAAGAAACGATTATCCATTTGTTGAAGTTTGACACGATGTCCCACATTGAACACTCTACGGGGACATGGTGTTTCCCGTTTTGGCGATGGACATAGTCACCATAGTTAGTTATACAACCCGCCATTACCGATCCTCAACTTGTTTGGGGGGGAGCTGCCTATATTTCTGCCCAGCAGAAATTGCCCACCCTGGGAGCCTGTGTGTGGACTGTGCGAAATAGTGTATTATATTAACAGA]
[+] EMBL BX611211 [ATTGGGGAATCTTGTTGCAAAGTGACGCAGTTCAATTGATACTCAGTGGTTTTTGATACAGTTCAATTAGAAGGTGCACAAAGTTCTGGATTTGTAATACGGTGCAGCATAAGTGAGTGGTTCTGTGAAGTTGAAAACGGCCAAGCAAAGGTTAATTATTACCCTGCAACCCTCCAGATCTCGTCCAGCATGTTACATACACGCACGATTGCTCTGCTGCTGGTGGGGCTAGTGGTGCTAGTGAATGCCCAAACGTTTCAGTACTCCCGTGGATGGACAAATGGGAAGCGTTCGCCGTTGTCTTCATCATCGTCTTCACCATCATCCTCGGCTGCAATGGAACCTTTAACTGCAAATCAGCTGCTGGCCTCTGCTCTGTCCTCTGGGGGATTAAACTCTTTAAAACCTAGTGAAAAAGCGCTCCTACGACGCTTTTTGCGGAACCCGTGCGATCTTCGTGTGGCCAGCTTATTGGCCGCTGCCCACCCAACCAAAGAGCTGTTTCCACTGGCCGGCAACAGCTTTGACAGTGCGGAATCAGCCGGAGCCGCATTCGTGCTGCCACCTTTCCTAATGGATCCCG ]
[+] EMBL BX607906 [ CTCCAGATCTCGTCCAGCATGTTACATACACGCACGATTGCTCTGCTGCTGGTGGGGCTAGTGGTGCTAGTGAATGCCCAAACGTTTCAGTACTCCCGTGGATGGACAAATGGGAAGCGTTCGCCGTTGTCTTCATCATCGTCTTCACCATCATCCTCGGCGGCAATGGAACCTTTAACTGCAAATCAGCTGCTGGCCTCTGCTCTGTCCTCTGGGGGATTAAACTCTTTAAAACCTAGTGAAAAAGCGCTCCTACGACGCTTTTTGCGGAACCCGTGCGATCTTCGTGTGGCCAGCTTATTGGCCGCTGCCCACCCAACCAAAGAGCTGTTTCCACTGGCCGGCAACAGCTTTGACAGTGCGGAATCAGCCGGATCCGCATTCGTGCTGCCACCTTTCCTAATGGATCCCGACGAAAGCAACGGTGGCATCGGTGGCAGCAATTTGGCCAACGGTCGCTCGATGGAGGACGAGCTGCGCT ]
[+] EMBL BX617643 [ GTGCGATCTTCGTGTGGCCAGCTTATTGGCCGCTGCCCACCCAACCAAAGAGCTGTTTCCACTGGCCGGCAACAGCTTTGACAGTGCGGAATCAGCCGGAGCCGCATTCGTGCTGCCACCTTTCCTAATGGATCCCGACGAAAGCAACGGTGGCATCGGTGGCAGCAATTTGGCCAACGGTCGCTCGATGGAGGACGAGCTGCGCTTCAAGCGCGGTACGGCCACCGGTTTTAGTGATCATCGTCAGAAAATTGCTTAAAACAGTCCCCGCTATATCCGTTATCACATGCCCGTCATCACATGCCGCCAGACATCAGAGTCAGTCAGTCAGTCAGTCACGTCGGGGTGGTCGGAGGAAGAGCGTAAATCAGCGGAAACAGGTGCTACGCTTCAGGATGGTGTCCACGTGGCGGTAATTGTTCTCGAGACGCATCCTTGAAGAGCTTCAGCAGGGGCAGAAGCAGCACCAGCAGCCGCACGTCAAGAGCAAGAAACGATGATTTAATAATGATTCGCGTCGAAGGCAGGAAAAAAGGAAGAAACGATTATCCATTTGTTGAAGTTTGACACGATGTCCCACATTGAACACTCTACGGGGACATGGTGTTTCCCGTTTTGGCGATGGACATAGTCACCATAGTTAGTTATACAACCCGCCATTACCGATCCTCAACTTGTTTGGGGGGGAGCTGCCTATATTTCTGCCCAGCAGAAATTGCCCACCCTGGGAGCCTGTGTGTGGACTGTGCGAAATAGTGTATTATATTAACAGA]
[+] EMBL BX614593 [ GTGCGATCTTCGAGTGGCCAGCTTATTGGCCGCTGCCCACCCAACCAAAGAGCTGTTTCCACTGGCCGGCAACAGCTTTGACAGTGCGGAATCAGCCGGAGCCGCATTCGTGCTGCCACCTTTCCTAATGGATCCCGACGAAAGCAACGGTGGCATCGGTGGCAGCAATTTGGCCAACGGTCGCTCGATGGAGGACGAGCTGCGCTTCAAGCGCGGTACGGCCACCGGTTTTAGTGATCATCGTCAGAAAATTGCTTAAAACAGTCCCCGCTATATCCGTTATCACATGCCCGTCATCACATGCCGCCTGACATCAGAGTCAGTCAGTCAGTCAGTCACTTCCGGGTGGTCGGAGGAAG ]
consensusID : consensus_6648#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 588 fasta sequence
[CCGATCCGGTTTAGACTAGTGACGGTCGATTGGGGAATCTTGTTGCAAAGTGACGCAGTTCAATTGATACTCAGTGGTTTTTGATACAGTTCAATTAGAAGGTGCACAAAGTGCTGGAATTGTAATACGGTGCAGCATAAATCTCGTCCAGCATGTTACATACACGCACGATTGCTCTGCTGCTGGTGGGGCTAGTGGTGCTAGTGAATGCCCAAACGTTTCAGTACTCCCGTGGATGGACAAATGGGAAGCGTTCGCCGTCGTCTTCATCATCGTCTTCACCATCATCCTCGGCTGCAATGGAACCTTTAACTGCGAATCAGCTGCTGGCCTCTGCTCTGTCTCCTGGGGGATTAAACTCTTTAAAACCTAGTGAAAAAGCGCTCCTACGACGCTTTTTGCGGAACCCGTGCGATCTTCGTGTGGCCAGCTTATTGGCCGCTGCCCACCCAACCAAAGAGCTGTTTCCACTGGCCGGCAACAGCTTTGACAGTGCGGAATCAGCCGGAGCCGCATTCGTCCTGCCACCTTTCCTAATGGATCCCGACGAGAGCAACGGTGGCATCGGTGGCAGCAATTTGGCCAACG]
[+] EMBL BM646600 [CCGATCCGGTTTAGACTAGTGACGGTCGATTGGGGAATCTTGTTGCAAAGTGACGCAGTTCAATTGATACTCAGTGGTTTTTGATACAGTTCAATTAGAAGGTGCACAAAGTGCTGGAATTGTAATACGGTGCAGCATAAATCTCGTCCAGCATGTTACATACACGCACGATTGCTCTGCTGCTGGTGGGGCTAGTGGTGCTAGTGAATGCCCAAACGTTTCAGTACTCCCGTGGATGGACAAATGGGAAGCGTTCGCCGTCGTCTTCATCATCGTCTTCACCATCATCCTCGGCTGCAATGGAACCTTTAACTGCGAATCAGCTGCTGGCCTCTGCTCTGTCTCCTGGGGGATTAAACTCTTTAAAACCTAGTGAAAAAGCGCTCCTACGACGCTTTTTGCGGAACCCGTGCGATCTTCGTGTGGCCAGCTTATTGGCCGCTGCCCACCCAACCAAAGAGCTGTTTCCACTGGCCGGCAACAGCTTTGACAGTGCGGAATCAGCCGGAGCCGCATTCGTCCTGCCACCTTTCCTAATGGATCCCGACGAGAGCAACGGTGGCATCGGTGGCAGCAATTTGGCCAACG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6648#0 ----------------------------ATTGGGGAATCTTGTTGCAAAGTGACGCAGTT 32
consensus_6648#1 CCGATCCGGTTTAGACTAGTGACGGTCGATTGGGGAATCTTGTTGCAAAGTGACGCAGTT 60
********************************
consensus_6648#0 CAATTGATACTCAGTGGTTTTTGATACAGTTCAATTAGAAGGTGCACAAAGTTCTGGATT 92
consensus_6648#1 CAATTGATACTCAGTGGTTTTTGATACAGTTCAATTAGAAGGTGCACAAAGTGCTGGAAT 120
**************************************************** ***** *
consensus_6648#0 TGTAATACGGTGCAGCATAAGTGAGTGGTTCTGTGAAGTTGAAAACGGCCAAGCAAAGGT 152
consensus_6648#1 TGTAATACGGTGCAGCATAA---------------------------------------- 140
********************
consensus_6648#0 TAATTATTACCCTGCAACCCTCCAGATCTCGTCCAGCATGTTACATACACGCACGATTGC 212
consensus_6648#1 -------------------------ATCTCGTCCAGCATGTTACATACACGCACGATTGC 175
***********************************
consensus_6648#0 TCTGCTGCTGGTGGGGCTAGTGGTGCTAGTGAATGCCCAAACGTTTCAGTACTCCCGTGG 272
consensus_6648#1 TCTGCTGCTGGTGGGGCTAGTGGTGCTAGTGAATGCCCAAACGTTTCAGTACTCCCGTGG 235
************************************************************
consensus_6648#0 ATGGACAAATGGGAAGCGTTCGCCGTTGTCTTCATCATCGTCTTCACCATCATCCTCGGC 332
consensus_6648#1 ATGGACAAATGGGAAGCGTTCGCCGTCGTCTTCATCATCGTCTTCACCATCATCCTCGGC 295
************************** *********************************
consensus_6648#0 TGCAATGGAACCTTTAACTGCAAATCAGCTGCTGGCCTCTGCTCTGTCCTCTGGGGGATT 392
consensus_6648#1 TGCAATGGAACCTTTAACTGCGAATCAGCTGCTGGCCTCTGCTCTGTCTCCTGGGGGATT 355
********************* ************************** **********
consensus_6648#0 AAACTCTTTAAAACCTAGTGAAAAAGCGCTCCTACGACGCTTTTTGCGGAACCCGTGCGA 452
consensus_6648#1 AAACTCTTTAAAACCTAGTGAAAAAGCGCTCCTACGACGCTTTTTGCGGAACCCGTGCGA 415
************************************************************
consensus_6648#0 TCTTCGTGTGGCCAGCTTATTGGCCGCTGCCCACCCAACCAAAGAGCTGTTTCCACTGGC 512
consensus_6648#1 TCTTCGTGTGGCCAGCTTATTGGCCGCTGCCCACCCAACCAAAGAGCTGTTTCCACTGGC 475
************************************************************
consensus_6648#0 CGGCAACAGCTTTGACAGTGCGGAATCAGCCGGAGCCGCATTCGTGCTGCCACCTTTCCT 572
consensus_6648#1 CGGCAACAGCTTTGACAGTGCGGAATCAGCCGGAGCCGCATTCGTCCTGCCACCTTTCCT 535
********************************************* **************
consensus_6648#0 AATGGATCCCGACGAAAGCAACGGTGGCATCGGTGGCAGCAATTTGGCCAACGGTCGCTC 632
consensus_6648#1 AATGGATCCCGACGAGAGCAACGGTGGCATCGGTGGCAGCAATTTGGCCAACG------- 588
*************** *************************************
consensus_6648#0 GATGGAGGACGAGCTGCGCTTCAAGCGCGGTACGGCCACCGGTTTTAGTGATCATCGTCA 692
consensus_6648#1 ------------------------------------------------------------
consensus_6648#0 GAAAATTGCTTAAAACAGTCCCCGCTATATCCGTTATCACATGCCCGTCATCACATGCCG 752
consensus_6648#1 ------------------------------------------------------------
consensus_6648#0 CCAGACATCAGAGTCAGTCAGTCAGTCAGTCACGTCGGGGTGGTCGGAGGAAGAGCGTAA 812
consensus_6648#1 ------------------------------------------------------------
consensus_6648#0 ATCAGCGGAAACAGGTGCTACGCTTCAGGATGGTGTCCACGTGGCGGTAATTGTTCTCGA 872
consensus_6648#1 ------------------------------------------------------------
consensus_6648#0 GACGCATCCTTGAAGAGCTTCAGCAGGGGCAGAAGCAGCACCAGCAGCCGCACGTCAAGA 932
consensus_6648#1 ------------------------------------------------------------
consensus_6648#0 GCAAGAAACGATGATTTAATAATGATTCGCGTCGAAGGCAGGAAAAAAGGAAGAAACGAT 992
consensus_6648#1 ------------------------------------------------------------
consensus_6648#0 TATCCATTTGTTGAAGTTTGACACGATGTCCCACATTGAACACTCTACGGGGACATGGTG 1052
consensus_6648#1 ------------------------------------------------------------
consensus_6648#0 TTTCCCGTTTTGGCGATGGACATAGTCACCATAGTTAGTTATACAACCCGCCATTACCGA 1112
consensus_6648#1 ------------------------------------------------------------
consensus_6648#0 TCCTCAACTTGTTTGGGGGGGAGCTGCCTATATTTCTGCCCAGCAGAAATTGCCCACCCT 1172
consensus_6648#1 ------------------------------------------------------------
consensus_6648#0 GGGAGCCTGTGTGTGGACTGTGCGAAATAGTGTATTATATTAACAGA 1219
consensus_6648#1 -----------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||