These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6666#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1267 fasta sequence [TGCGTGCGGCAGA-CACTGAATTTGTGCGAATTTCTCCCTCAATTAATACCGTTTTCCCATGTGTGTTCCGTGCGGCCGGTAAAGCAGTTCCGTGATTAAGCAGCTCCCCTAAATGCTTAGCATCGTCGCGGCCACTTTTTGCTGGTGTACATTGCGGTAGTGCCGGAAGGAGGGAAGGTGTATAGGATCACGCAGCAGGGCAACACAACAAACCGGTGCCGACCATGGACATGCTGATAGCGAACGTCGACAGTTGGACTTTTAAGATAGAAAAGGATCTCAACGAACAGTATGGAGCTCTGGCGCTTCCCTTCCCCGGGATGGACAAATCCACCGCAGCCGTGTGTCTGTTTTTCAACGCCTCCGACGGGACGGAATGCAAGAAGGGCAACTCCTGCCCGTTCCGACACATCCGCGGCGATCGCACGATCGTGTGCAAGCA-CT-GGCTGCGCGGTCTGTGCAAAAAGGGCGATCAGTGCGAGTTTCTGCACGAGTACGACATGACCAAGATGCCGGAATGCTACTTCTACTCCCGCTTCAACGCCTGCCACAACAAGGAGTGCCCGTTTCTGCACATCGATCCGGAGAGCAAAATCAAAGATTGCCCCTGGTACGAT-CGGGGGTTCTGCCGGCATGGGCCCAACTGCCGGCACCGGCATGTGCGGCGCGTCCTGTGCAACAACTATCTGGCCGGCTTCTGTCCCG-ACGGG-CCGGAGTGTAAGTACA-TGCATCCGCGGTTCGAGCTGCCGCCCCCGCCCGAGATTAAGGACCAAACGCCGAAGCGTCCCACCACCTGCCATTACTGTGGGGAGGTGGGCCACAAAGCATCGTACTGTCCGAAGATGCCACTGGAGCAACGGGAAGCAACGCAACGCATGGGAGGATGCCAAGTATCGTGCCCTCGGTTACTTCAAACACCGAATTCATCAAGACGGAGGAAACAATCCGGGTGGTGGTGGTGCTGGTGGCGAGGAGGGAAATTTCGTGCCACAAAAACCTCCCCCACGCCCAATCGAGGAAATTACATGCTTCAAGTGCGGCATCAAAGGACACTACGCCAACAAGTGCACGAAGGGCCGCGCTGGCATTCCTTTCCAACAATGTACAAAGAAAGTAGGCCACGAACAACCAACTCTCGTGTTGCACTTTCCCTCCACCATTGCGCCGCCGACCGTTTTCTTCCTTTCTTTCCGTATTTTTTTTGTTCGTATGTCATTAATAAGTTGTAAAAAAGAAGATCGAGCTAAAAAATAAAAAAAAAAAAAAT] [+] EMBL CNS09AM6 [TGCGTGCGGCAGA CACTGAATTTGTGCGAATTTCTCCCTCAATTAATACCGTTTTCCCATGTGTGTTCCGTGCGGCCGGTAAAGCAGTTCCGTGATTAAGCAGCTCCCCTAAATGCTTAGCATCGTCGCGGCCACTTTTTGCTGGTGTACATTGCGGTAGTGCCGGAAGGAGGGAAGGTGTATAGGATCACGCAGCAGGGCAACACAACAAACCGGTGCCGACCATGGACATGCTGATAGCGAACGTCGACAGTTGGACTTTTAAGATAGAAAAGGATCTCAACGAACAGTATGGAGCTCTGGCGCTTCCCTTCCCCGGGATGGACAAATCCACCGCAGCCGTGTGTCTGTTTTTCAACGCCTCCGACGGGACGGAATGCAAGAAGGGCAACTCCTGCCCGCTCCGACACATCCGCGGCGATCGCACGATCGTGTGCAAGCA CT GGCTGCGCGGTCTGTGCAAAAAGGGCGATCAGTGCGAGTTTCTGCACGAGTACGACATGACCAAGATGCCGGAATGCTACTTCTACTCCCGCTTCAACGCCTGCCACAACAAGGAGTGCCCGTTTCTGCACATCGATCCGGAGAGCAAAATCAAAGATTGCCCCTGGTACGAT CGGGGGTTCTGCCGGCATGGGCCCAACTGCCGGCACCGGCATGTGCGGCGCGTCCTGTGCAACAACTATCTGGCCGGCTTCTGTCCCG ACGGG CCGGAGTGTAAGTACA TGCATCCGCGGTTCGAGCTGCCGCCCCCGCCCGAGATTAAGGACCAAACGCCGAAGCGTCCCACCACCTGCCATTACTGTGGGGAGGTGGGCCACAAAGCATCGTACTGTCCGAAGATGCCACTGGAGCAACGGGAAGCAACGCAACGCATGGGAGGATGCCAAGTATCGTGCCCTCGGTTACTTCAAACACCGAATTCATCAAGACGGAGGAAA ] [+] EMBL BX623029 [ GCAGAGCACTGAATTTGTGCGAATTTCTCCCTCAATTAATACCGTTTTCCCATGTGTGTTCCGTGCGGCCGGTAAAGCAGTTCCGTGATTAAGCAGCTCCCCTAAATGCTTAGCATCGTCGCGGCCACTTTTTGCTGGTGTACATTGCGGTAGTGCCGGAAGGAGGGAAGGTGTATAGGATCACGCAGCAGGGCAACACAACAAACCGGTGCCGACCATGGACATGCTGATAGCGAACGTCGACAGTTGGACTTTTAAGATAGAAAAGGATCTCAACGAACAGTATGGAGCTCTGGCGCTTCCCTTCCCCGGGATGGACAAATCCACCGCAGCCGTGTGTCTGTTTTTCAACGCCTCCGACGGGACGGAATGCAAGAAGGGCAACTCCTGCCCGTTCCGACACATCCGCGGCGATCGCACGATCGTGT CAAGCA CT GGCTGCGCGGTCTGTGCAAAAAGGGCGATCAGTGCGAGTTTCTGCACGAGTACGACATGACCAAGATGCCGGAATGCTACTTCTACTCCCGCTTCAACGCCTGCCACAACAAGGAGTGCCCGTTTCTGCACATCGATCCGGAGAGCAAAATCAAAGATTGCCCCTGGTACGAT CGGGGGTTCTGCCGGCATGGGCCCAACTGCCGGCACCGGCATGTGCGGCGCGTCCTGTGCAACAACTATCTGGCCGGCTTCTGTCCCG ACGGG CCGGAGTGTAAGTACA TGCATCCGCGGTTCGAGCTGCCGCCCCCGCCCGANATTAAGGACC ] [+] EMBL BM615116 [ cCGGCCGGTAAAGCAGTTCCGTGATTTAGCTGCTCCCCTAAATGCTTATCATCGTTGCGGCCACATTTAGCTGGTGTACATTGCGGTAGTGCCGGAAGGAGGGAAGGTGTATAGGATCACGCAGCAGAGCAGCACAACAAACCGGTGCCGACCATGGACATGCTGATAGCGAACGTCGACAGTTGGACTTTTAAGATAGAAAAGGATCTCAACGAACAGTATGGAGCTCTGGCGCTTCCCTTCCCCGGGATGGACAAATCCACCGCGGCCGTGTGTCTGTTTTTCAATGCCTCCGACGGGACGGAATGCAAGAAAGGCAACTCCTGCCCGTTCCGACACATCCGCGGCGATCGCACGATCGTGTGCAAGCA CTGGGCTGCGCGGTCTGTGTAAAAAGGGCGACCAGTGCGAGTTTCTGCACGAGTACGACATGACCAAGATGCCGGAATGCTACTTCTACTCCCGCTTCAACGCCTGCCACAACAAGGAGTGCCCGTTTCTGCACATCGATCCGGAGAGCAAAATCAAAGATTGCCCCTGGTACGATCCGGGGGTTCTGCCGGCATGGGCCCAACTGCCGGCACCGGCATGTGCGGCGCGTCCTGTGCAACAACTATCTGGCCGGCTTCTGTCCCGAACGGGCCCGGAGTGTAAGTACATTGCATCCGCGGTTCGAGCTGCCGCCCCCG ] [+] EMBL BX626881 [ GTGCCGACCATGGACATGCTGATAGCGAACGTCGACAGTTGGACTTTTAAGATAGAAAAGGATCTCAACGAACAGTATGGAGCTCTGGCGCTTCCCTTCCCCGGGATGGACAAATCCACCGCAGCCGTGTGTCTGTTTTTCAACGCCTCCGACGGGACGGAATGCAAGAAGGGCAACTCCTGCCCGTTCCGACACATCCGCGGCGATCGCACGATCGTGTGCAAGCA CT GGCTGCGCGGTCTGTGCAAAAAGGGCGATCAGTGCGAGTTTCTGCACGAGTACGACATGACCAAGATGCCGGAATGCTACTTCTACTCCCGCTTCAACGCCTGCCACAACAAGGAGTGCCCGTTTCTGCACATCGATCCGGAGAGCAAAATCAAAGATTGCCCCTGGTACGAT CGGGGGTTCTGCCGGCATGGGCCCAACTGCCGGCACCGGCATGTGCGGCGCGTCCTGTGCAACAACTATCTGGCCGGCTTCTGTCCCG ACGGG CCGGAGTGTAAGTACA TGCATCCGCGGTTCGAGCTGCCGCCCCCGCCCGAGATTAAGGACCAAACGCCGAAGCGTCCCACCACCTGCCATTACTGTGGGGAGGTGGGCCACAAAGCATCGTACTGTCCGAAGATGCCACTGGAGCAACGGGAAGCAACGCAACGCAT ] [-] EMBL CNS09AM7 [ CCCGCTCCGACACATCCGCGGCGATCGCACGATCGTGTGCAAGAACCT GG TGCGCGGTCTGTGCAAAAAGGGCGATCAGTGCGAGTTTCTGCACGAGTACGACATGACCAAGATGCCGGAATGCTACTTCTACTCCCGCTTCAACGCCTGCCACAACAAGGAGTGCCCGTTTCTGCACATCGATCCGGAGAGCAAAATCAAAGATTGCCCCTGGTACGAT CGGGGGTTCTGCCGGCATGGGCCCAACTGCCGGCACCGGCATGTGCGGCGCGTCCTGTGCAACAACTATCTGGCCGGCTTCTGTCCCG ACGGG CCGGAGTGTAAGTACA TGCATCCGCGGTTCGAGCTGCCGCCCCCGCCCGAGATTAAGGACCAAACGCCGAAGCGTCCCACCACCTGCCATTACTGTGGGGAGGTGGGCCACAAAGCATCGTACTGTCCGAAGATGCCACTGGAGCAACGGGAAGCAACGCAACGCAT GGAGGATGCCAAGTATCGTGCCCTCGGTTACTTCAAACACCGAATTCATCAAGACGGAGGAAACAATCCGGGTGGTGGTGGTGCTGGTGGCGAGGAGGGAAATTTCGTGCCACAAAAACCTCCCCCACGCCCAATCGAGGAAATTACATGCTTCAAGTGCGGCATCAAAGGACACTACGCCAACAAGTGCACGAAGGGCCGCGCTGGCATTCCTTTCCAACAATGTACAAAGAAAGTAGGCCACGAACAACCAACTCTCGTGTTGCACTTTCCCTCCACCATTGCGCCGCCGACCGTTTTCTTCCTTTCTTTCCGTATTTTTTTTGTTCGTATGTCATTAATAAGTTGTAAAAAAGAAGATCGAGCTAAAAAATAAAAAAAAAAAAAAT] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||