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Anopheles gambiae
cluster # 6666 cluster # 6666       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6666#0 length = 1267 sequences # 5  

consensusID : consensus_6666#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1267
fasta sequence
                              [TGCGTGCGGCAGA-CACTGAATTTGTGCGAATTTCTCCCTCAATTAATACCGTTTTCCCATGTGTGTTCCGTGCGGCCGGTAAAGCAGTTCCGTGATTAAGCAGCTCCCCTAAATGCTTAGCATCGTCGCGGCCACTTTTTGCTGGTGTACATTGCGGTAGTGCCGGAAGGAGGGAAGGTGTATAGGATCACGCAGCAGGGCAACACAACAAACCGGTGCCGACCATGGACATGCTGATAGCGAACGTCGACAGTTGGACTTTTAAGATAGAAAAGGATCTCAACGAACAGTATGGAGCTCTGGCGCTTCCCTTCCCCGGGATGGACAAATCCACCGCAGCCGTGTGTCTGTTTTTCAACGCCTCCGACGGGACGGAATGCAAGAAGGGCAACTCCTGCCCGTTCCGACACATCCGCGGCGATCGCACGATCGTGTGCAAGCA-CT-GGCTGCGCGGTCTGTGCAAAAAGGGCGATCAGTGCGAGTTTCTGCACGAGTACGACATGACCAAGATGCCGGAATGCTACTTCTACTCCCGCTTCAACGCCTGCCACAACAAGGAGTGCCCGTTTCTGCACATCGATCCGGAGAGCAAAATCAAAGATTGCCCCTGGTACGAT-CGGGGGTTCTGCCGGCATGGGCCCAACTGCCGGCACCGGCATGTGCGGCGCGTCCTGTGCAACAACTATCTGGCCGGCTTCTGTCCCG-ACGGG-CCGGAGTGTAAGTACA-TGCATCCGCGGTTCGAGCTGCCGCCCCCGCCCGAGATTAAGGACCAAACGCCGAAGCGTCCCACCACCTGCCATTACTGTGGGGAGGTGGGCCACAAAGCATCGTACTGTCCGAAGATGCCACTGGAGCAACGGGAAGCAACGCAACGCATGGGAGGATGCCAAGTATCGTGCCCTCGGTTACTTCAAACACCGAATTCATCAAGACGGAGGAAACAATCCGGGTGGTGGTGGTGCTGGTGGCGAGGAGGGAAATTTCGTGCCACAAAAACCTCCCCCACGCCCAATCGAGGAAATTACATGCTTCAAGTGCGGCATCAAAGGACACTACGCCAACAAGTGCACGAAGGGCCGCGCTGGCATTCCTTTCCAACAATGTACAAAGAAAGTAGGCCACGAACAACCAACTCTCGTGTTGCACTTTCCCTCCACCATTGCGCCGCCGACCGTTTTCTTCCTTTCTTTCCGTATTTTTTTTGTTCGTATGTCATTAATAAGTTGTAAAAAAGAAGATCGAGCTAAAAAATAAAAAAAAAAAAAAT]

[+] EMBL CNS09AM6             [TGCGTGCGGCAGA CACTGAATTTGTGCGAATTTCTCCCTCAATTAATACCGTTTTCCCATGTGTGTTCCGTGCGGCCGGTAAAGCAGTTCCGTGATTAAGCAGCTCCCCTAAATGCTTAGCATCGTCGCGGCCACTTTTTGCTGGTGTACATTGCGGTAGTGCCGGAAGGAGGGAAGGTGTATAGGATCACGCAGCAGGGCAACACAACAAACCGGTGCCGACCATGGACATGCTGATAGCGAACGTCGACAGTTGGACTTTTAAGATAGAAAAGGATCTCAACGAACAGTATGGAGCTCTGGCGCTTCCCTTCCCCGGGATGGACAAATCCACCGCAGCCGTGTGTCTGTTTTTCAACGCCTCCGACGGGACGGAATGCAAGAAGGGCAACTCCTGCCCGCTCCGACACATCCGCGGCGATCGCACGATCGTGTGCAAGCA CT GGCTGCGCGGTCTGTGCAAAAAGGGCGATCAGTGCGAGTTTCTGCACGAGTACGACATGACCAAGATGCCGGAATGCTACTTCTACTCCCGCTTCAACGCCTGCCACAACAAGGAGTGCCCGTTTCTGCACATCGATCCGGAGAGCAAAATCAAAGATTGCCCCTGGTACGAT CGGGGGTTCTGCCGGCATGGGCCCAACTGCCGGCACCGGCATGTGCGGCGCGTCCTGTGCAACAACTATCTGGCCGGCTTCTGTCCCG ACGGG CCGGAGTGTAAGTACA TGCATCCGCGGTTCGAGCTGCCGCCCCCGCCCGAGATTAAGGACCAAACGCCGAAGCGTCCCACCACCTGCCATTACTGTGGGGAGGTGGGCCACAAAGCATCGTACTGTCCGAAGATGCCACTGGAGCAACGGGAAGCAACGCAACGCATGGGAGGATGCCAAGTATCGTGCCCTCGGTTACTTCAAACACCGAATTCATCAAGACGGAGGAAA                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX623029             [        GCAGAGCACTGAATTTGTGCGAATTTCTCCCTCAATTAATACCGTTTTCCCATGTGTGTTCCGTGCGGCCGGTAAAGCAGTTCCGTGATTAAGCAGCTCCCCTAAATGCTTAGCATCGTCGCGGCCACTTTTTGCTGGTGTACATTGCGGTAGTGCCGGAAGGAGGGAAGGTGTATAGGATCACGCAGCAGGGCAACACAACAAACCGGTGCCGACCATGGACATGCTGATAGCGAACGTCGACAGTTGGACTTTTAAGATAGAAAAGGATCTCAACGAACAGTATGGAGCTCTGGCGCTTCCCTTCCCCGGGATGGACAAATCCACCGCAGCCGTGTGTCTGTTTTTCAACGCCTCCGACGGGACGGAATGCAAGAAGGGCAACTCCTGCCCGTTCCGACACATCCGCGGCGATCGCACGATCGTGT CAAGCA CT GGCTGCGCGGTCTGTGCAAAAAGGGCGATCAGTGCGAGTTTCTGCACGAGTACGACATGACCAAGATGCCGGAATGCTACTTCTACTCCCGCTTCAACGCCTGCCACAACAAGGAGTGCCCGTTTCTGCACATCGATCCGGAGAGCAAAATCAAAGATTGCCCCTGGTACGAT CGGGGGTTCTGCCGGCATGGGCCCAACTGCCGGCACCGGCATGTGCGGCGCGTCCTGTGCAACAACTATCTGGCCGGCTTCTGTCCCG ACGGG CCGGAGTGTAAGTACA TGCATCCGCGGTTCGAGCTGCCGCCCCCGCCCGANATTAAGGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM615116             [                                                                        cCGGCCGGTAAAGCAGTTCCGTGATTTAGCTGCTCCCCTAAATGCTTATCATCGTTGCGGCCACATTTAGCTGGTGTACATTGCGGTAGTGCCGGAAGGAGGGAAGGTGTATAGGATCACGCAGCAGAGCAGCACAACAAACCGGTGCCGACCATGGACATGCTGATAGCGAACGTCGACAGTTGGACTTTTAAGATAGAAAAGGATCTCAACGAACAGTATGGAGCTCTGGCGCTTCCCTTCCCCGGGATGGACAAATCCACCGCGGCCGTGTGTCTGTTTTTCAATGCCTCCGACGGGACGGAATGCAAGAAAGGCAACTCCTGCCCGTTCCGACACATCCGCGGCGATCGCACGATCGTGTGCAAGCA CTGGGCTGCGCGGTCTGTGTAAAAAGGGCGACCAGTGCGAGTTTCTGCACGAGTACGACATGACCAAGATGCCGGAATGCTACTTCTACTCCCGCTTCAACGCCTGCCACAACAAGGAGTGCCCGTTTCTGCACATCGATCCGGAGAGCAAAATCAAAGATTGCCCCTGGTACGATCCGGGGGTTCTGCCGGCATGGGCCCAACTGCCGGCACCGGCATGTGCGGCGCGTCCTGTGCAACAACTATCTGGCCGGCTTCTGTCCCGAACGGGCCCGGAGTGTAAGTACATTGCATCCGCGGTTCGAGCTGCCGCCCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX626881             [                                                                                                                                                                                                                        GTGCCGACCATGGACATGCTGATAGCGAACGTCGACAGTTGGACTTTTAAGATAGAAAAGGATCTCAACGAACAGTATGGAGCTCTGGCGCTTCCCTTCCCCGGGATGGACAAATCCACCGCAGCCGTGTGTCTGTTTTTCAACGCCTCCGACGGGACGGAATGCAAGAAGGGCAACTCCTGCCCGTTCCGACACATCCGCGGCGATCGCACGATCGTGTGCAAGCA CT GGCTGCGCGGTCTGTGCAAAAAGGGCGATCAGTGCGAGTTTCTGCACGAGTACGACATGACCAAGATGCCGGAATGCTACTTCTACTCCCGCTTCAACGCCTGCCACAACAAGGAGTGCCCGTTTCTGCACATCGATCCGGAGAGCAAAATCAAAGATTGCCCCTGGTACGAT CGGGGGTTCTGCCGGCATGGGCCCAACTGCCGGCACCGGCATGTGCGGCGCGTCCTGTGCAACAACTATCTGGCCGGCTTCTGTCCCG ACGGG CCGGAGTGTAAGTACA TGCATCCGCGGTTCGAGCTGCCGCCCCCGCCCGAGATTAAGGACCAAACGCCGAAGCGTCCCACCACCTGCCATTACTGTGGGGAGGTGGGCCACAAAGCATCGTACTGTCCGAAGATGCCACTGGAGCAACGGGAAGCAACGCAACGCAT                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS09AM7             [                                                                                                                                                                                                                                                                                                                                                                                                              CCCGCTCCGACACATCCGCGGCGATCGCACGATCGTGTGCAAGAACCT GG TGCGCGGTCTGTGCAAAAAGGGCGATCAGTGCGAGTTTCTGCACGAGTACGACATGACCAAGATGCCGGAATGCTACTTCTACTCCCGCTTCAACGCCTGCCACAACAAGGAGTGCCCGTTTCTGCACATCGATCCGGAGAGCAAAATCAAAGATTGCCCCTGGTACGAT CGGGGGTTCTGCCGGCATGGGCCCAACTGCCGGCACCGGCATGTGCGGCGCGTCCTGTGCAACAACTATCTGGCCGGCTTCTGTCCCG ACGGG CCGGAGTGTAAGTACA TGCATCCGCGGTTCGAGCTGCCGCCCCCGCCCGAGATTAAGGACCAAACGCCGAAGCGTCCCACCACCTGCCATTACTGTGGGGAGGTGGGCCACAAAGCATCGTACTGTCCGAAGATGCCACTGGAGCAACGGGAAGCAACGCAACGCAT GGAGGATGCCAAGTATCGTGCCCTCGGTTACTTCAAACACCGAATTCATCAAGACGGAGGAAACAATCCGGGTGGTGGTGGTGCTGGTGGCGAGGAGGGAAATTTCGTGCCACAAAAACCTCCCCCACGCCCAATCGAGGAAATTACATGCTTCAAGTGCGGCATCAAAGGACACTACGCCAACAAGTGCACGAAGGGCCGCGCTGGCATTCCTTTCCAACAATGTACAAAGAAAGTAGGCCACGAACAACCAACTCTCGTGTTGCACTTTCCCTCCACCATTGCGCCGCCGACCGTTTTCTTCCTTTCTTTCCGTATTTTTTTTGTTCGTATGTCATTAATAAGTTGTAAAAAAGAAGATCGAGCTAAAAAATAAAAAAAAAAAAAAT]


>consensus_6666#0 TGCGTGCGGCAGACACTGAATTTGTGCGAATTTCTCCCTCAATTAATACCGTTTTCCCAT GTGTGTTCCGTGCGGCCGGTAAAGCAGTTCCGTGATTAAGCAGCTCCCCTAAATGCTTAG CATCGTCGCGGCCACTTTTTGCTGGTGTACATTGCGGTAGTGCCGGAAGGAGGGAAGGTG TATAGGATCACGCAGCAGGGCAACACAACAAACCGGTGCCGACCATGGACATGCTGATAG CGAACGTCGACAGTTGGACTTTTAAGATAGAAAAGGATCTCAACGAACAGTATGGAGCTC TGGCGCTTCCCTTCCCCGGGATGGACAAATCCACCGCAGCCGTGTGTCTGTTTTTCAACG CCTCCGACGGGACGGAATGCAAGAAGGGCAACTCCTGCCCGTTCCGACACATCCGCGGCG ATCGCACGATCGTGTGCAAGCACTGGCTGCGCGGTCTGTGCAAAAAGGGCGATCAGTGCG AGTTTCTGCACGAGTACGACATGACCAAGATGCCGGAATGCTACTTCTACTCCCGCTTCA ACGCCTGCCACAACAAGGAGTGCCCGTTTCTGCACATCGATCCGGAGAGCAAAATCAAAG ATTGCCCCTGGTACGATCGGGGGTTCTGCCGGCATGGGCCCAACTGCCGGCACCGGCATG TGCGGCGCGTCCTGTGCAACAACTATCTGGCCGGCTTCTGTCCCGACGGGCCGGAGTGTA AGTACATGCATCCGCGGTTCGAGCTGCCGCCCCCGCCCGAGATTAAGGACCAAACGCCGA AGCGTCCCACCACCTGCCATTACTGTGGGGAGGTGGGCCACAAAGCATCGTACTGTCCGA AGATGCCACTGGAGCAACGGGAAGCAACGCAACGCATGGGAGGATGCCAAGTATCGTGCC CTCGGTTACTTCAAACACCGAATTCATCAAGACGGAGGAAACAATCCGGGTGGTGGTGGT GCTGGTGGCGAGGAGGGAAATTTCGTGCCACAAAAACCTCCCCCACGCCCAATCGAGGAA ATTACATGCTTCAAGTGCGGCATCAAAGGACACTACGCCAACAAGTGCACGAAGGGCCGC GCTGGCATTCCTTTCCAACAATGTACAAAGAAAGTAGGCCACGAACAACCAACTCTCGTG TTGCACTTTCCCTCCACCATTGCGCCGCCGACCGTTTTCTTCCTTTCTTTCCGTATTTTT TTTGTTCGTATGTCATTAATAAGTTGTAAAAAAGAAGATCGAGCTAAAAAATAAAAAAAA AAAAAAT



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)