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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6725#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1213 fasta sequence
[CATGACGTACGTGGCGGACATCTTTTTGGCACAAAGCTGGCGCGATCCGCGCCTACGGCTACCAGAAAACATGAGCGAAGAGTACCGGATACTCGACGTCGACTGGCTGCACAGCATCTGGCGGCCGGACTGCTTCTTCAAGAACGCCAAAAAGGTGACGTTTCACGAGATGAGCATACCGAACCACTACCTCTGGCTGTACCACGACAAGACGCTGCTGTACATGTCCAAGCTGACGCTCGTCCTGTCCTGTGCGATGAAGTTCGAATCGTACCCGCACGACACGCAGATCTGCTCGATGATGATCGAAATTTTATCGCACACGGTACAGGATTTGTTGTTCATCTGGAACATGACCGACCCGCTGGTGGTGAACCCGGAAATCGAGCTGCCCCAGCTGGACATCAGCAACAACTACACCACCGACTGTACGATCGAGTACTCGACCGGTAACTTCACCTGTCTGGCGGTGGTGTTCAACCTGAGACGGCGGCTGGGCTACCATCTGTTCCACACCTACATCCCGTCCGCGCTGATCGTCGTCATGTCGTGGATATCGTTCTGGATCAAACCGGAGGCCATCCCGGCACGGGTAACACTCGGCGTCACCTCGCTACTAACGTTAGCCACACAAAACACCCAATCGCAACAATCGCTACCGCCGGTATCGTACGTGAAGGCCATCGACGTCTGGATGTCGTCCTGCTCCGTGTTTGTGTTTCTGTCGCTGATGGAGTTCGCGGTGGTCAACAACTACATGGGCCCGGTGGCGACCAAAGCGATGAAGGGCTACTCGGACGAGGACCTGTCGGAGGCGATCGACTTTAACAAGAACGGCTACAACAAGGACCACCGCTCGTCGGAGGTACCGCGGTACGATACGTTCTGCCACGGGCGGGAAACGGCCCTCTGCATCGACAAGTTTTCCCGCTTCTTTTTCCCCTTCTCGTTCTTCATACTGAACGTTACCTACTGGACCACGTTCCTGTAGGAGGGGACGGGGGGAGGCTCCCCTCAGGCAACAACAGAAATTTGCCCATGGAGCTGCTGCTGAAGAAAGCATTGAAGGTATCATCCAGCATCCAGCAAATGACATTAGATGAGATACCGGTACACTAGGAACATAGTAGCTGTAAGATACTGGCACCATCGGATTGGCCGATCGGTCACTAGGCGTAAGCGACACATATAACAAAGTAAATAAAGTAGTTCT]
[+] EMBL BX613223 [CATGACGTACGTGGCGGACATCTTTTTGGCACAAAGCTGGCGCGATCCGCGCCTACGGCTACCAGAAAACATGAGCGAAGAGTACCGGATACTCGACGTCGACTGGCTGCACAGCATCTGGCGGCCGGACTGCTTCTTCAAGAACGCCAAAAAGGTGACGTTTCACGAGATGAGCATACCGAACCACTACCTCTGGCTGTACCACGACAAGACGCTGCTGTACATGTCCAAGCTGACGCTCGTCCTGTCCTGTGCGATGAAGTTCGAATCGTACCCGCACGACACGCAGATCTGCTCGATGATGATCGAAATTTTATCGCACACGGTACAGGATTTGTTGTTCATCTGGAACATGACCGACCCGCTGGTGGTGAACCCGGAAATCGAGCTGCCCCAGCTGGACATCAGCAACAACTACACCACCGACTGTACGATCGAGTACTCGACCGGTAACTTCACCTGTCTGGCGGTGGTGTTCAACCTGAGACGGCGGCTGGGCTACCATCTGTTCCACACCTACATCCCGTCCGCGCTGATCGTCGTCATGTCGTGGATATCGTTCTGGATCAAACCGGAGGCCATCCCGGCACGGGTAACACTCGGCGTCACCTCGCTACTAACGTTAGCCACACAAAACACCCAATCGCAACAATCGCTACCGCCGGTATCGTACGTGAAGGCCATCGACGTCTGGATGTCGTCCTGCTCCGTGTTTGTGTTTCTGTCGCTGATGGAGTTCGCGGTGGTCAACAACTACATGGGCCCGGTGGCGACC AAGCGATGAAGGGCTACTCGGACGAGGACCTGTCGGAGGCGATCGACTTTTACAAGAACGGCTACACCAAGGA CACCt ]
[+] EMBL BX616285 [ AATCGAGCTGCCCCAGCTGGACATCAGCAACAACTACACCACCGACTGTACGATCGAGTACTCGACCGGTAACTTCACCTGTCTGGCGGTGGTGTTCAACCTGAGACGGCGGCTGGGCTACCATCTGTTCCACACCTACATCCCGTCCGCGCTGATCGTCGTCATGTCGTGGATATCGTTCTGGATCAAACCGGAGGCCATCCCGGCACGGGTAACACTCGGCGTCACCTCGCTACTAACGTTAGCCACACAAAACACCCAATCGCAACAATCGCTACCGCCGGTATCGTACGTGAAGGCCATCGACGTCTGGATGTCGTCCTGCTCCGTGTTTGTGTTTCTGTCGCTGATGGAGTTCGCGGTGGTCAACAAC ]
[+] EMBL BX616647 [ GTCGTGGATATCGTTCTGGATCAAACCGGAGGCCATCCCGGCTCGGGTAACACTCGGCGTCACCTCGCTACTAACGTTAGCCACACAAAACACCCAATCGCAACAATCGCTACCGCCGGTATCGTACGTGAAGGCCATCGACGTCTGGATGTCGTCCTGCTCCGTGTTTGTGTTTCTGTCGCTGATGGAGTTCGCGGTGGTCAACAACTACATGGGCCCGGTGGCGACCAAAGCGATGAAGGGCTACTCGGACGAGGACCTGTCGGAGGCGATCGACTTTAACAAGAACGGCTACAACAAGGACCACCGCTCGTCGGAGGTACCGCGGTACGATACGTTCTGCCACGGGCGGGAAACGGCCCTCTGCATCGACAAGTTTTCCCGCTTCTTTTTCCCCTTCTCGTTCTTCATACTGAACGTTACCTACTGGACCACGTTCCTGTAGGAGGGGACGGGGGGAGGCTCCCCTCAGGCAACAACAGAAATTTGCCCATGGAGCTGCTGCTGAAGAAAGCATTGAAGGTATCATCCAGCATCCAGCAAATGACATTAGATGAGATACCGGTACACTAGGAACATAGTAGCTGTAAGATACTGGCACCA ]
[+] EMBL BX616122 [ GTATCGTACGTGAAGGCCATCGACGTCTGGATGTCGTCCTGCTCCGTGTTTGTGTTTCTGTCGCTGATGGAGTTCGCGGTGGTCAACAACTACATGGGCCCGGTGGCGACCAAAGCGATGAAGGGCTACTCGGACGAGGACCTGTCGGAGGCGATCGACTTTAACAAGAACGGCTACAACAAGGACCACCGCTCGTCGGAGGTACCGCGGTACGATACGTTCTGCCACGGGCGGGAAACGGCCCTCTGCATCGACAAGTTTTCCCGCTTCTTTTTCCCCTTCTCGTTCTTCATACTGAACGTTACCTACTGGACCACGTTCCTGTAGGAGGGGACGGGGGGAGGCTCCCCTCAGGCAACAACAGAAATTTGCCCATGGAGCTGCTGCTGAAGAAAGCATTGAAGGTATCATCCAGCATCCAGCAAATGACATTAGATGAGATACCGGTACACTAGGAACATAGTAGCTGTAAGATACTGGCACCATCGGATTGGCCGATCGGTCACTAGGCGTAAGCGACACATATAACAAAGTAAATAAAGTAGTTCT]
consensusID : consensus_6725#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 732 fasta sequence
[CCGAAACAATCCCTCTCCCCAATCACCAAAAAAAAACACCGGC-GATGGCACAGTATCGCACACGGTACAGGATTTGGTGTTCATCTGGAACATGACCGACCCGCTGGTGGTGAACCCGGAAATCGAGCTGCCCCAGCTGGACATCAGCAACAACTACACCACCGACTGTACGATCGAGTACTCGACCGGTAACTTCACCTGCCTGGCGGTGGTGTTCAACCTGAGACGGCGGCTGGGCTACCATCTGTTCCACACCTACATCCCGTCCGCGCTGATCGTCGTCATGTCGTGGATATCGTTCTGGATCAAACCGGAAGCCATCCCGGCACGGGTAACACTCGGCGTCACCTCGCTACTAACGTTAGCCACACAAAACACCCAATCGCAACAATCGCTTCCGCCGGTATCGTACGTAAAGGCCATCGACGTCTGGATGTCGTCCTGCTCCGTGTTTGTGTTTCTCTCGCTGATGGAGTTCGCGGTGGTCAACAACTACATGGGCCCGGTGGCGACCAAAGCGATGAAGGGCTACTCGGACGAGGACCTGTCGGAGGCGATCGACTTTAACAAGAACGGCTACAACAAGGACCACCGCTCGTCGGAGGTACCGCGGTACGATACGTTCTGCCACGGGCGGGAAACGGCCCTCTGCATCGACAAGTTTTCCCGCTTCTTTTTCCCCTTCTCGTTCTTCATACTGAACGTTACCTACTGGACCACGTTCCTGTAGGA]
[+] EMBL BM587895 [CCGAAACAATCCCTCTCCCCAATCACCAAAAAAAAACACCGGC GATGGCACAGTATCGCACACGGTACAGGATTTGGTGTTCATCTGGAACATGACCGACCCGCTGGTGGTGAACCCGGAAATCGAGCTGCCCCAGCTGGACATCAGCAACAACTACACCACCGACTGTACGATCGAGTACTCGACCGGTAACTTCACCTGCCTGGCGGTGGTGTTCAACCTGAGACGGCGGCTGGGCTACCATCTGTTCCACACCTACATCCCGTCCGCGCTGATCGTCGTCATGTCGTGGATATCGTTCTGGATCAAACCGGAAGCCATCCCGGCACGGGTAACACTCGGCGTCACCTCGCTACTAACGTTAGCCACACAAAACACCCAATCGCAACAATCGCTTCCGCCGGTATCGTACGTAAAGGCCATCGACGTCTGGATGTCGTCCTGCTCCGTGTTTGTGTTTCTCTCGCTGATGGAGTTCGCGGTGGTCAACAACTACATGGGCCCGGTGGCGACCAAAGCGATGAAGGGCTACTCG ]
[+] EMBL BX609393 [ cCCGGCTCATGGCACAGTATCGCACACTGTACAGGATTTGGTGTTCATCTGGAACATGACCGACCCGCTGGTGGTGAACCCGGAAATCGAGCTGCCCCAGCTGGACATCAGCAACAACTACACCACCGACTGTACGATCGAGTACTCGACCGGTAACTTCACCTGTCTGGCGGTGGTGTTCAACCTGAGACGGCGGCTGGGCTACCATCTGTTCCACACCTACATCCCGTCCGCGCTGATCGTCGTCATGTCGTGGATATCGTTCTGGATCAAACCGGAGGCCATCCCGGCACGGGTAACACTCGGCGTCACCTCGCTACTAACGTTAGCCACACAAAACACCCAATCGCAACAATCGCTACCGCCGGTATCGTACGTGAAGGCCATCGACGTCTGGATGTCGTCCTGCTCCGTGTTTGTGTTTCTGTCGCTGATGGAGTTCGCGGTGGTCAACAACTACATGGGCCCGGTGGCGACCAAAGCGATGAAGGGCTACTCGGACGAGGACCTGTCGGAGGCGATCGACTTTAACAAGAACGGCTACAACAAGGACCACCGCTCGTCGGAGGTACCGCGGTACGATACGTTCTGCCACGGGCGGGAAACGGCCCTCTGCATCGACAAGTTTTCCCGCTTCTTTTTCCCCTTCTCGTTCTTCATACTGAACGTTACCTACTGGACCACGTTCCTGTAGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6725#0 CATGACGTACGTGGCGGACATCTTTTTGGCACAAAGCTGGCGCGATCCGCGCCTACGGCT 60
consensus_6725#1 ------------------------------------------------------------
consensus_6725#0 ACCAGAAAACATGAGCGAAGAGTACCGGATACTCGACGTCGACTGGCTGCACAGCATCTG 120
consensus_6725#1 ------------------------------------------------------------
consensus_6725#0 GCGGCCGGACTGCTTCTTCAAGAACGCCAAAAAGGTGACGTTTCACGAGATGAGCATACC 180
consensus_6725#1 ------------------------------------------------------------
consensus_6725#0 GAACCACTACCTCTGGCTGTACCACGACAAGACGCTGCTGTACATGTCCAAGCTGACGCT 240
consensus_6725#1 ------------------------------------------------------------
consensus_6725#0 CGTCCTGTCCTGTGCGATGAAGTTCGAATCGTACCCGCACGACACGCAGATCTGCTCGAT 300
consensus_6725#1 ----------------CCGAAAC---AATCCCTCTCCCCAATCAC-CAAAAAAAAACACC 40
*** **** * * * *** ** * *
consensus_6725#0 GATGATCGAAATTTTATCGCACACGGTACAGGATTTGTTGTTCATCTGGAACATGACCGA 360
consensus_6725#1 GGCGAT-GGCACAGTATCGCACACGGTACAGGATTTGGTGTTCATCTGGAACATGACCGA 99
* *** * * *********************** **********************
consensus_6725#0 CCCGCTGGTGGTGAACCCGGAAATCGAGCTGCCCCAGCTGGACATCAGCAACAACTACAC 420
consensus_6725#1 CCCGCTGGTGGTGAACCCGGAAATCGAGCTGCCCCAGCTGGACATCAGCAACAACTACAC 159
************************************************************
consensus_6725#0 CACCGACTGTACGATCGAGTACTCGACCGGTAACTTCACCTGTCTGGCGGTGGTGTTCAA 480
consensus_6725#1 CACCGACTGTACGATCGAGTACTCGACCGGTAACTTCACCTGCCTGGCGGTGGTGTTCAA 219
****************************************** *****************
consensus_6725#0 CCTGAGACGGCGGCTGGGCTACCATCTGTTCCACACCTACATCCCGTCCGCGCTGATCGT 540
consensus_6725#1 CCTGAGACGGCGGCTGGGCTACCATCTGTTCCACACCTACATCCCGTCCGCGCTGATCGT 279
************************************************************
consensus_6725#0 CGTCATGTCGTGGATATCGTTCTGGATCAAACCGGAGGCCATCCCGGCACGGGTAACACT 600
consensus_6725#1 CGTCATGTCGTGGATATCGTTCTGGATCAAACCGGAAGCCATCCCGGCACGGGTAACACT 339
************************************ ***********************
consensus_6725#0 CGGCGTCACCTCGCTACTAACGTTAGCCACACAAAACACCCAATCGCAACAATCGCTACC 660
consensus_6725#1 CGGCGTCACCTCGCTACTAACGTTAGCCACACAAAACACCCAATCGCAACAATCGCTTCC 399
********************************************************* **
consensus_6725#0 GCCGGTATCGTACGTGAAGGCCATCGACGTCTGGATGTCGTCCTGCTCCGTGTTTGTGTT 720
consensus_6725#1 GCCGGTATCGTACGTAAAGGCCATCGACGTCTGGATGTCGTCCTGCTCCGTGTTTGTGTT 459
*************** ********************************************
consensus_6725#0 TCTGTCGCTGATGGAGTTCGCGGTGGTCAACAACTACATGGGCCCGGTGGCGACCAAAGC 780
consensus_6725#1 TCTCTCGCTGATGGAGTTCGCGGTGGTCAACAACTACATGGGCCCGGTGGCGACCAAAGC 519
*** ********************************************************
consensus_6725#0 GATGAAGGGCTACTCGGACGAGGACCTGTCGGAGGCGATCGACTTTAACAAGAACGGCTA 840
consensus_6725#1 GATGAAGGGCTACTCGGACGAGGACCTGTCGGAGGCGATCGACTTTAACAAGAACGGCTA 579
************************************************************
consensus_6725#0 CAACAAGGACCACCGCTCGTCGGAGGTACCGCGGTACGATACGTTCTGCCACGGGCGGGA 900
consensus_6725#1 CAACAAGGACCACCGCTCGTCGGAGGTACCGCGGTACGATACGTTCTGCCACGGGCGGGA 639
************************************************************
consensus_6725#0 AACGGCCCTCTGCATCGACAAGTTTTCCCGCTTCTTTTTCCCCTTCTCGTTCTTCATACT 960
consensus_6725#1 AACGGCCCTCTGCATCGACAAGTTTTCCCGCTTCTTTTTCCCCTTCTCGTTCTTCATACT 699
************************************************************
consensus_6725#0 GAACGTTACCTACTGGACCACGTTCCTGTAGGAGGGGACGGGGGGAGGCTCCCCTCAGGC 1020
consensus_6725#1 GAACGTTACCTACTGGACCACGTTCCTGTAGGA--------------------------- 732
*********************************
consensus_6725#0 AACAACAGAAATTTGCCCATGGAGCTGCTGCTGAAGAAAGCATTGAAGGTATCATCCAGC 1080
consensus_6725#1 ------------------------------------------------------------
consensus_6725#0 ATCCAGCAAATGACATTAGATGAGATACCGGTACACTAGGAACATAGTAGCTGTAAGATA 1140
consensus_6725#1 ------------------------------------------------------------
consensus_6725#0 CTGGCACCATCGGATTGGCCGATCGGTCACTAGGCGTAAGCGACACATATAACAAAGTAA 1200
consensus_6725#1 ------------------------------------------------------------
consensus_6725#0 ATAAAGTAGTTCT 1213
consensus_6725#1 -------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||