These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_673#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 418 fasta sequence [GGGCGTAACCACCAGGGAATCCATGCCCGTTTTCGAGTTGTACACCTTTTGCTTGACGAAGCCGGGATCCACCACGTAGTAGATTCCGTCGATTGTTAGGGACGTTTCGGCGATGTTGGTTGCAATTACGACCTTACGGCTCCCGGGTGGGGCCGGATCGAAGATGCGCGTTTGCATTTCCGACGGGAGGGCAGAGTAGACGGGCAGGATGATGAGTTCCGGAACGTCCGGACCCAACGACTTCATCCGCTCGTACAGAATCTCACAGGCAGTATCAATCTCCTCCTGACCGGTGAGGAAGAGCAGCACATCCCCTGGCGGTTCACGCAGATGGATCTGCATGACGGTGATGAGCGATGCGTCCAGATAATCCGTTTCCGGCTCCTTCGTGTAGAGAATCTCCACCGGGAACGTTCGT] [+] EMBL AGA280634 [GGGCGTAACCACCAGGGAATCCATGCCCGTTTTCGAGTTGTACACCTTTTGCTTGACGAAGCCGGGATCCACCACGTAGTAGATTCCGTCGATTGTTAGGGACGTTTCGGCGATGTTGGTTGCAATTACGACCTTACGGCTCCCGGGTGGGGCCGGATCGAAGATGCGCGTTTGCATTTCCGACGGGAGGGCAGAGTAGACGGGCAGGATGATGAGTTCCGGAACGTCCGGACCCAACGACTTCATCCGCTCGTACAGAATCTCACAGGCAGTATCAATCTCCTCCTGACCGGTGAGGAAGAGCAGCACATCCCCTGGCGGTTCACGCAGATGGATCTGCATGACGGTGATGAGCGATGCGTCCAGATAATCCGTTTCCGGCTCCTTCGTGTAGAGAATCTCCACCGGGAACGTTCGT] consensusID : consensus_673#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 362 fasta sequence [TTTTCGAGTTGTACACCTTTTGCTTGACGAAGCCGGGGATCCACCCACGTAGGTAGATTCCGTCGATTGTTAGGGACGTTTCGGCGATGTTGGTTGCAATTACGACCTTACGGCTCCCGGGTGGGGCCAGGATTCGAAGGATGCGCGTTTGCATTTCCGACGGGAGGGCAGAGTAGACGGGCAGGATGATGAGTTCCGGAACGTCCGGACCCAACGGACTTCATCCGCTCGTACAGAATCTCACAGGCAGTATCAATCTCCTCCTGACCGGTGAGGAAGAGCAGCACATCCCTGGCGGTTCACGCAGATGGATCTGCAAGACGGTGATGAGCGATGCGTCCAATAATAAACCTCGGGGGATT] [-] EMBL AL932321 [TTTTCGAGTTGTACACCTTTTGCTTGACGAAGCCGGGGATCCACCCACGTAGGTAGATTCCGTCGATTGTTAGGGACGTTTCGGCGATGTTGGTTGCAATTACGACCTTACGGCTCCCGGGTGGGGCCAGGATTCGAAGGATGCGCGTTTGCATTTCCGACGGGAGGGCAGAGTAGACGGGCAGGATGATGAGTTCCGGAACGTCCGGACCCAACGGACTTCATCCGCTCGTACAGAATCTCACAGGCAGTATCAATCTCCTCCTGACCGGTGAGGAAGAGCAGCACATCCCTGGCGGTTCACGCAGATGGATCTGCAAGACGGTGATGAGCGATGCGTCCAATAATAAACCTCGGGGGATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_673#0 GGGCGTAACCACCAGGGAATCCATGCCCGTTTTCGAGTTGTACACCTTTTGCTTGACGAA 60 consensus_673#1 -----------------------------TTTTCGAGTTGTACACCTTTTGCTTGACGAA 31 ******************************* consensus_673#0 GCCGGG-ATCCACC-ACGTAG-TAGATTCCGTCGATTGTTAGGGACGTTTCGGCGATGTT 117 consensus_673#1 GCCGGGGATCCACCCACGTAGGTAGATTCCGTCGATTGTTAGGGACGTTTCGGCGATGTT 91 ****** ******* ****** ************************************** consensus_673#0 GGTTGCAATTACGACCTTACGGCTCCCGGGTGGGGCCGGA--TCGAAG-ATGCGCGTTTG 174 consensus_673#1 GGTTGCAATTACGACCTTACGGCTCCCGGGTGGGGCCAGGATTCGAAGGATGCGCGTTTG 151 ************************************* * ****** *********** consensus_673#0 CATTTCCGACGGGAGGGCAGAGTAGACGGGCAGGATGATGAGTTCCGGAACGTCCGGACC 234 consensus_673#1 CATTTCCGACGGGAGGGCAGAGTAGACGGGCAGGATGATGAGTTCCGGAACGTCCGGACC 211 ************************************************************ consensus_673#0 CAACG-ACTTCATCCGCTCGTACAGAATCTCACAGGCAGTATCAATCTCCTCCTGACCGG 293 consensus_673#1 CAACGGACTTCATCCGCTCGTACAGAATCTCACAGGCAGTATCAATCTCCTCCTGACCGG 271 ***** ****************************************************** consensus_673#0 TGAGGAAGAGCAGCACATCCCCTGGCGGTTCACGCAGATGGATCTGCATGACGGTGATGA 353 consensus_673#1 TGAGGAAGAGCAGCACATCCC-TGGCGGTTCACGCAGATGGATCTGCAAGACGGTGATGA 330 ********************* ************************** *********** consensus_673#0 GCGATGCGTCCAGATAATCCGTTTCCGGCTCCTTCGTGTAGAGAATCTCCACCGGGAACG 413 consensus_673#1 GCGATGCGTCCA-ATAATAAACCTCGGGGGATT--------------------------- 362 ************ ***** ** ** * consensus_673#0 TTCGT 418 consensus_673#1 ----- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||