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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6736#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 684 fasta sequence
[AAGGCCAGAATCGGCACGAGGCTGTTGGTAACGGGGAGGGTAGAAGTGAAATACAGCTTCACCACGAACGAGCGGAACTTCCACCCCGCCCCCCCCCCCCACCCAAAATGCAGCTGATGAGGATGCCCCACTGCAACGAAAAGGAGGTAGTTGGGGCTTGTGCTAGCCTTGTCCTCCGCGAGACGCCCGCCCATGTGTTTAGTGGGCGTGTACGGCAGTTTCTTATACTCATTATCAGTTTGTAACCGTTTTACTACGATGCCATTTGTAAATGTACAGAATGTGAAAATGTTGATGTTTTTGTTTTTTTTTTATTAGCTTTCATTTTCGGATTTTTTTTTTGCTCAAGATCGCGCGCGAGAGCTGCGGAAAGAACGGAAGGAAGGCGTTTCGTGGGGGGCTGAAATCAATGAAATCAAATTAATCGTATTGCTAAAACACAATACACTGTTCTTCAAAACGGGCGTAGATCGCACAAACGCTTGCGCGATCGAGAACCCGCTGATGAGCAACACATTACATTCGACAAGTCAATTACATACAAGCGGAACGTTAAAACGAGCACAGGCTAGAGGCGATCGTTTTTGGAGGGGGAATGGTGGGCTTGCCACCAGCAACATCCATTTGACGATGCTCCATACCTCAATATGTGTTTCCTTTCTAAAATGAACCACTTTGTTCTGT]
[+] EMBL BX467775 [AAGGCCAGAATCGGCACGAGGCTGTTGGTAACGGGGAGGGTAGAAGTGAAATACAGCTTCACCACGAACGAGCGGAACTTCCACCCCGCCCCCCCCCCCCACCCAA ]
[+] EMBL BM634627 [ ccGGTAGAAGTGAAATACAGCTTCACCACGAACGAGCGGAACTTCCACCCCGCCCCCCCCCCCCACCCCAAATGCAGCTGATGAGGATGCCCCACTGCAACGAAAAGGAGGTAGTTGGGGCTTGTGCTAGCCTTGTCCTCCGCGAGACGCCCGCCCATGTGTTTAGTGGGCGTGTACGGCAGTTTCTTATACTCATTATCAGTTTGTAACCGTTTTACTACGATGCCATTTGTAAATGTACAGAATGTGAAAATGTTGATGTTTTTGTTTTTTTTTTATTAGCTTTCATTTTCGGATTTTTTTTTTGCTCAAGATCGCGCGCGAGAGCTGCGGAAAGAACGGAAGGAAGGCGTTTCGTGGGGGGCTGAAATCAATGAAATCAAATTAATCGTATTGCTAAAACACAATACACTGTTCTTCAAAACGGGCGTAGATCGCACAAACGCTTGCGCGATCGAGAACCCGCTGATGAGCAACACATTACATTCGACAAGTCAATTACATACAAGCGGAACGTTAAAACGAGCACAGGCTAGAGGCGATCGTTTTTGGAGGGGGAATGGTGGGCTTGCCACCAGCAACATCCATTTGACGATGCTCCATACCTCAATATGTGTTTCCTTTCTAAAATGAACCACTTTGTTCTGT]
[+] EMBL BX614290 [ CTCCGCGAGACGCCCGCCCATGTGTTTAGTGGGCGTGTACGGCAGTTTCTTATACTCATTATCAGTTTGTAACCGTTTTACTACGATGCCATTTGTAAATGTACAGAATGTGAAAATGTTGATGTTTTTGTTTTTTTTTTATTAGCTTTCATTTTCGGATTTTTTTTTTGCTCAAGATCGCGCGCGAGAGCTGCGGAAAGAACGGAAGGAAGGCGTTTCGTGGGGGGCTGAAATCAATGAAATCAAATTAATCGTATTGCTAAAACACAATACACTGTTCTTCAAAACGGGCGTAGATCGCACAAACGCTTGCGCGATCGAGAACCCGCTGATGAGCAACACATTACATTCGACAAGTCAATTACATACAAACGGA ]
consensusID : consensus_6736#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 552 fasta sequence
[CACCGCTTTGGTGAAAGTGATCATGGGAACGATCGTGTACTGTTGGTAACGGGGAGGGTAGAAGTGAAATACAGCTTCACCACGAACGAGCGGAACTTCCACCCCGGCCCCCCCCCCCACCCCAAATGCAGCTGATGAGGATGCCCCACTGCAACGAAAAGGAGGTAGTTGGGGCTTGTGCTAGCCTTGTCCTCCGCGAGACGCCCGCCCATGTGTTTAGTGGGCGTGTACGGCAGTTTCTTATACTCATTATCAGTTTGTAACCGTTTTACTACGATGCCATTTGTAAATGTACAGAATGTGAAAATGTTGATGTTTTTGTTTTTTTTTATTAGCTTTCATTTTCGGATTTTTTTTTTGCTCAAGATCGCGCGCGAGAGCTGCGGAAAGAACGGAAGGAAGGCGTTTCGTGGGGGGCTGAAATCAATGAAATCAAATTAATCGTATTGCTAAAACACAATACACTGTTCTTCAAAACGGGCGTAGATCGCACAAACGCTTGCGCGATCGAGAACCCGCTGATGAGCAACACATTACATTCGACAAGTCAAT]
[+] EMBL BX627913 [CACCGCTTTGGTGAAAGTGATCATGGGAACGATCGTGTACTGTTGGTAACGGGGAGGGTAGAAGTGAAATACAGCTTCACCACGAACGAGCGGAACTTCCACCCCGGCCCCCCCCCCCACCCCAAATGCAGCTGATGAGGATGCCCCACTGCAACGAAAAGGAGGTAGTTGGGGCTTGTGCTAGCCTTGTCCTCCGCGAGACGCCCGCCCATGTGTTTAGTGGGCGTGTACGGCAGTTTCTTATACTCATTATCAGTTTGTAACCGTTTTACTACGATGCCATTTGTAAATGTACAGAATGTGAAAATGTTGATGTTTTTGTTTTTTTTTATTAGCTTTCATTTTCGGATTTTTTTTTTGCTCAAGATCGCGCGCGAGAGCTGCGGAAAGAACGGAAGGAAGGCGTTTCGTGGGGGGCTGAAATCAATGAAATCAAATTAATCGTATTGCTAAAACACAATACACTGTTCTTCAAAACGGGCGTAGATCGCACAAACGCTTGCGCGATCGAGAACCCGCTGATGAGCAACACATTACATTCGACAAGTCAAT]
consensusID : consensus_6736#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 532 fasta sequence
[CCGGTCAATTACATACAGCGGAACGTTACAGAGCGAGCACAAGCTACTAGATGCGATCGTTTTTGGAGGGGGAACGTTGGGCTCACCACCAGCAACATTTAGTTGACGATGCTCCATACCTCAATTTGTGTTTCCTTTCTAAAATGAACCACTTTGTTCTACGTTGTACGTTCCTTCTTTTTGATTGGATGTTGCTTTTCCTTATGCTTATGACGTAAAGCGCAACGCTTCGGGAAAGAGTTGGCAGCGCTGAAAGGCGTACGATTTAGGCTGGGAAATGGCAACAGGAAAGGGCATCACAATGTGTACGTTTCTCCCGTAGCTGATGGATGGACAGACGACTCCCCTTTCCCCAAAGGTACAAAAAAAAGAAGAAAGGGCTGGATAGAATAAGATGCTGTAAGCGCACTGTAAGTGAAACTTGGGCAGCCAGCGACAAACAACAGTCACAAAACGTATGTACCGTATAAAAAACACACACACACACAAACACATACCCGTCTCGCCCAACAGGAGATTCGAAAAACGGAAG]
[+] EMBL BM606809 [CCGGTCAATTACATACAGCGGAACGTTACAGAGCGAGCACAAGCTACTAGATGCGATCGTTTTTGGAGGGGGAACGTTGGGCTCACCACCAGCAACATTTAGTTGACGATGCTCCATACCTCAATTTGTGTTTCCTTTCTAAAATGAACCACTTTGTTCTACGTTGTACGTTCCTTCTTTTTGATTGGATGTTGCTTTTCCTTATGCTTATGACGTAAAGCGCAACGCTTCGGGAAAGAGTTGGCAGCGCTGAAAGGCGTACGATTTAGGCTGGGAAATGGCAACAGGAAAGGGCATCACAATGTGTACGTTTCTCCCGTAGCTGATGGATGGACAGACGACTCCCCTTTCCCCAAAGGTACAAAAAAAAGAAGAAAGGGCTGGATAGAATAAGATGCTGTAAGCGCACTGTAAGTGAAACTTGGGCAGCCAGCGACAAACAACAGTCACAAAACGTATGTACCGTATAAAAAACACACACACACACAAACACATACCCGTCTCGCCCAACAGGAGATTCGAAAAACGGAAG]
consensusID : consensus_6736#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 302 fasta sequence
[AGAATCGCCACGAGGTGTAGTACCGTTTACTACGATGCCATTTGTAAATGTACAGAATGTGAAAATGTTGATGTTTTTGTTTTTTTTTTATTAGCTTTCATTTTCGGATTTTTTTTTTGCTCAAGATCGCGCGCGAGAGCTGCGGAAAGAACGGAAGGAAGGCGTTTCGTGGGGGGCTGAAATCNATGAAATCAAATTAATCGTATTGCTAAAACACAATACACTGTTCTTCAAAACGGGCGTAGATCGCCACAAACGCTTGCGCGATCGAGAACCCGCTGATGAGCAACACATTACATTCG]
[+] EMBL BX469134 [AGAATCGCCACGAGGTGTAGTACCGTTTACTACGATGCCATTTGTAAATGTACAGAATGTGAAAATGTTGATGTTTTTGTTTTTTTTTTATTAGCTTTCATTTTCGGATTTTTTTTTTGCTCAAGATCGCGCGCGAGAGCTGCGGAAAGAACGGAAGGAAGGCGTTTCGTGGGGGGCTGAAATCNATGAAATCAAATTAATCGTATTGCTAAAACACAATACACTGTTCTTCAAAACGGGCGTAGATCGCCACAAACGCTTGCGCGATCGAGAACCCGCTGATGAGCAACACATTACATTCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6736#1 CACCGCTTTGGTGAAAGTGATCATGGGAACGATCGTGTACTGTTGGTAACGGGGAGGGTA 60
consensus_6736#3 ------------------------------------------------------------
consensus_6736#0 ------------------AAGGCCAGAATCGGCACGAGGCTGTTGGTAACGGGGAGGGTA 42
consensus_6736#2 ---------------------CCGGTCAATTACATACAGCGGAACGTTACAGAGCGAGCA 39
consensus_6736#1 GAAGTGAAATACAGCTTCACCACGAACGAGCGGAACTTCCACCCCGGCCCCCCC----CC 116
consensus_6736#3 ------------------------------------------------------------
consensus_6736#0 GAAGTGAAATACAGCTTCACCACGAACGAGCGGAACTTCCACCCCGCCCCCCCC----CC 98
consensus_6736#2 CAAGCTACTAGATGCGATCGTTTTTGGAGGGGGAACGTTGGGCTCACCACCAGCAACATT 99
consensus_6736#1 CCACCCCAAATGCAGCTGATGAGGATGCCCCACTGCAACGAAAAGGAGGTAGTTGGGGCT 176
consensus_6736#3 ------------------------------------------------------------
consensus_6736#0 CCACCCAAAATGCAGCTGATGAGGATGCCCCACTGCAACGAAAAGGAGGTAGTTGGGGCT 158
consensus_6736#2 TAGTTGACGATGCTCCATACCTCAATTTGTGTTTCCTTTCTAAAATGAACCACTTTGTTC 159
consensus_6736#1 TGTGCTAGCCTTGTCCTCCGCGAGACGCCCGCCCATGTGTTTAGTGGGCGTGTACGGCAG 236
consensus_6736#3 ------------------------------------------------------------
consensus_6736#0 TGTGCTAGCCTTGTCCTCCGCGAGACGCCCGCCCATGTGTTTAGTGGGCGTGTACGGCAG 218
consensus_6736#2 TACGTTGTACGTTCCTTCTTTTTGAT-TGGATGTTGCTTTTCCTTATGCTTATGACGTAA 218
consensus_6736#1 TTTCTTATACTCATTATCAG-TTTGTAACCGTTTTAC----TACGATGCCATTTGTAAAT 291
consensus_6736#3 ------AGAATCGCCACGAGGTGTAGTACCGTTT-AC----TACGATGCCATTTGTAAAT 49
consensus_6736#0 TTTCTTATACTCATTATCAG-TTTGTAACCGTTTTAC----TACGATGCCATTTGTAAAT 273
consensus_6736#2 AGCGCAACGCTTCGGGAAAGAGTTGGCAGCGCTGAAAGGCGTACGATTTAGGCTGGGAAA 278
* * ** * * ** * * ****** ** **
consensus_6736#1 GTACAGAATGTGAAAATGTTGATGTTTTTGTTTTTTTTT-ATTAGCT--TTCATTTTCGG 348
consensus_6736#3 GTACAGAATGTGAAAATGTTGATGTTTTTGTTTTTTTTTTATTAGCT--TTCATTTTCGG 107
consensus_6736#0 GTACAGAATGTGAAAATGTTGATGTTTTTGTTTTTTTTTTATTAGCT--TTCATTTTCGG 331
consensus_6736#2 TGGCAACAGGAAAGGGCATCACAATGTGTACGTTTCTCCCGT-AGCTGATGGATGGACAG 337
** * * * * * * * *** * * **** * ** * *
consensus_6736#1 ATTTTTTTTTTGCTCAAGATCGCGCGCGAGAGCTGCGGAAAGAACGGAAGGAAGGCGTTT 408
consensus_6736#3 ATTTTTTTTTTGCTCAAGATCGCGCGCGAGAGCTGCGGAAAGAACGGAAGGAAGGCGTTT 167
consensus_6736#0 ATTTTTTTTTTGCTCAAGATCGCGCGCGAGAGCTGCGGAAAGAACGGAAGGAAGGCGTTT 391
consensus_6736#2 ACGACTCCCCTTTCCCCAAAGGTACAAAAAAAAGAAGAAAGGGCTGGATAGAATAAGATG 397
* * * * * * * * * * ** * *** *** * *
consensus_6736#1 CGTGGGGGGCTGAAATCAATGAAATCAAATTAATCGTATTGCTAAAACACAATACACTGT 468
consensus_6736#3 CGTGGGGGGCTGAAATCNATGAAATCAAATTAATCGTATTGCTAAAACACAATACACTGT 227
consensus_6736#0 CGTGGGGGGCTGAAATCAATGAAATCAAATTAATCGTATTGCTAAAACACAATACACTGT 451
consensus_6736#2 C-TGTAAGCGCACTGTAAGTGAAACTTGGGCAGCC--AGCGACAAACAACAGT------- 447
* ** * * ***** * * * * *** *** *
consensus_6736#1 TCTTCAAAACGGGCGTAGATCGC-ACAAACGCTTGCGCGATCGAGAACCCGCTGATGA-G 526
consensus_6736#3 TCTTCAAAACGGGCGTAGATCGCCACAAACGCTTGCGCGATCGAGAACCCGCTGATGA-G 286
consensus_6736#0 TCTTCAAAACGGGCGTAGATCGC-ACAAACGCTTGCGCGATCGAGAACCCGCTGATGA-G 509
consensus_6736#2 --CACAAAACGTATGTACCGTATAAAAAACACACACACACACAAACACATACCCGTCTCG 505
******* *** * **** * * * * * ** * * *
consensus_6736#1 CAACACATTACATTCGACAAGTCAAT---------------------------------- 552
consensus_6736#3 CAACACATTACATTCG-------------------------------------------- 302
consensus_6736#0 CAACACATTACATTCGACAAGTCAATTACATACAAGCGGAACGTTAAAACGAGCACAGGC 569
consensus_6736#2 CCCAACAGGAGATTCGAAAAACGGAAG--------------------------------- 532
* *** * *****
consensus_6736#1 ------------------------------------------------------------
consensus_6736#3 ------------------------------------------------------------
consensus_6736#0 TAGAGGCGATCGTTTTTGGAGGGGGAATGGTGGGCTTGCCACCAGCAACATCCATTTGAC 629
consensus_6736#2 ------------------------------------------------------------
consensus_6736#1 -------------------------------------------------------
consensus_6736#3 -------------------------------------------------------
consensus_6736#0 GATGCTCCATACCTCAATATGTGTTTCCTTTCTAAAATGAACCACTTTGTTCTGT 684
consensus_6736#2 -------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||