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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6774#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1228 fasta sequence
[CCGAGAACGTCGGACAGTACGGTTTTGTTTGGTGCGGAGATCTGAGCTCCTGTGGATCCGTCCTTTGTGGATACTGTGTCCCATTGGTTTGGTGTGTGCCCCATCTGGTTGTGTAACAACTTTAGAGCACGCGAATCTGGTTGCGAATCTTATTCGGTGCCAACGGTCCACGTGAGCTTCAGGCAAAACCTGTACAGTTTTCCCGTGTATCGAACCCTGTTTTCCCTGTCGTCAGAAGGTTGTGATAGTGGGTGTGTCGGTGTGTTTGTGCGTTGAACAATTGTTACATAATCGTTGAGATAACCCATTTAAACGCCAACAGTAAATTCGAGAGAATACACAAAAACCACAGTTCATCACGCAAAACACTTTCCAGTAAAGTAGCAACACATCCCAAAAGACCCAGAAAACAACAGACAGGAAAATGACGTCGATAAACGTGGAAAAGTACAAACTGTCCGACAAAACGGCAAAGCTCACAGCCAAAGACATCATCCCGGTGGTGCAGTCGTCCGATTCGGCGGAGACGCGCGAGTTCCTGAACAAAATCGCCGAGCTGCTGGTCGACTACGTCAACATACAGAACGACCGGAAGGAGAAGATCCTTGACTTCCACCATCCGGAGGACATGAAGAAGCTGCTCACGCTGGACAT-CCCCGAGGACGCGGTCACACTGCAACAGCTGGTGAAGGACTGTGCCATGACGCTCAAGTACCAGGTCAAGACAGGACATCCCCATTTCTTCAATCAGCTGTCGTGCGGTCTTGACGTGGTGTCGATGGCGGGCGAGTGGCTGACGGCAACTGCCAACACCAACATGTTCACGTACGAAATTGCCCCAGTGTTCATCCTGATGGAGAACGTCGTGCTGTCGAAGATGCGCAAGATCATTGGCTGGGACGGTGGTGATTCGATCCTGGCGCCCGGTGGCTCCATCTCGAACCTGTACGCGTTTCTGGCCGCCCGGCACAAGATGTTCCCGAACTACAAGGAGCATGGGGCACGTGCCCTGCCCGGTGAGTTGGTCATGTTCACGTCGGACCAATGCCACTACTCGGTCAAGTCGTGTGCGGCCGTGTGTGGGCTCGGCACGGACAACTGCGTGATGGTACCGTCGGACGAGCACGGTCGTCTGATTCCGGCCGAGCTGGAGCGGCTGATTCTGGAGCGCAAGGCGCGGGGCCAGATTCCGTTCTTCGTGAATGCGACCGCCGGCACTACCGTGCTC]
[+] EMBL BM605038 [CCGAGAACGTCGGACAGTACGGTTTTGTTTGGTGCGGAGATCTGAGCTCCTGTGGATCCGTCCTTTGTGGATACTGTGTCCCATTGGTTTGGTGTGTGCCCCATCTGGTTGTGTAACAACTTTAGAGCACGCGAATCTGGTTGCGAATCTTATTCGGTGCCAACGGTCCACGTGAGCTTCAGGCAAAACCTGTACAGTTTTCCCGTGTATCGAACCCTGTTTTCCCTGTCGTCAGAAGGTTGTGATAGTGGGTGTGTCGGTGTGTTTGTGCGTTGAACAATTGTTACATAATCGTTGAGATAACCCATTTAAACGCCAACAGTAAATTCGAGAGAATACACAAAAACCACAGTTCATCACGCAAAACACTTTCCAGTAAAGTAGCAACACATCCCAAAAGACCCAGAAAACAACAGACAGGAAAATGACGTCGATAAACGTGGAAAAGTACAAACTGTCCGACAAAACGGCAAAGCTCACAGCCAAAGACATCATCCCGGTGGTGCAGTCGTCCGATTCGGCGGAGACGCGCGAGTTCCTGAAC AAATCG ]
[+] EMBL BM644012 [ ccgCAGTACGGTTTTGTTTGGTGCGGAGATCTGAGCTCCTGTGGATCCGTCCTTTGTGGATACTGTGTCCCATTGGTTTGGTGTGTGCCCCATCTGGTTGTGTAACAACTTTAGAGCACGCGAATCTGGTTGCGAATCTTATTCGGTGCCAACGGTCCACGTGAGCTTCAGGCAAAACCTGTACAGTTTTCCCGTGTATCGAACCCTGTTTTCCCTGTCGTCAGAAGGTTGTGATAGTGGGTGTGTCGGTGTGTTTGTGCGTTGAACAATTGTTACATAATCGTTGAGATAACCCATTTAAACGCCAACAGTAAATTCGAGAGAATACACAAAAACCACAGTTCATCACGCAAAACACTTTCCAGTAAAGTAGCAACACATCCCAAAAGACCCAGAAAACAACAGACAGGAAAATGACGTCGATAAACGTGGAAAAGTACAAACTGTCCGACAAAACGGCAAAGCTCACAGCCAAAGACATCATCCCGGTGGTGCAGTCGTCCGATTCGGCGGAGACGCGCGAGTTCCTGAACAAAATCGCCGAGCTGCTGGTCGACTACGTCAACATACAGAACGACCGGAAGGAGAAGATCCTTGACTTCCACCATCCGGAGGACATGAAGAAGCTGCTCACGCTGGACATCCCCCGAGGACGCGGTCACACTGCAACAGCTGGTGAAGGA ]
[+] EMBL BM584580 [ ccgGTACGGTTTTGTTTGGTGCGGAGATCTGAGCTCCTGTGGATCCGTCCTTTGTGGATACTGTGTCCCATTGGTTTGGTGTGTGCCCCATCTGGTTGTGTAACAACTTTAGAGCACGCGAATCTGGTTGCGAATCTTATTCGGTGCCAACGGTCCACGTGAGCTTCAGGCAAAACCTGTACAGTTTTCCCGTGTATCGAACCCTGTTTTCCCTGTCGTCAGAAGGTTGTGATAGTGGGTGTGTCGGTGTGTTTGTGCGTTGAACAATTGTTACATAATCGTTGAGATAACCCATTTAAACGCCAACAGTAAATTCGAGAGAATACACAAAAACCACAGTTCATCACGCAAAACACTTTCCAGTAAAGTAGCAACACATCCCAAAAGACCCAGAAAACAACAGACAGGAAAATGACGTCGATAAACGTGGAAAAGTACAAACTGTCCGACAAAACGGCAAAGCTCACAGCCAAAGACATCATCCCGGTGGTGCAGTCGTCCGATTCGGCGGAGACGCGCGAGTTCCTGAACAAAATCGCCGAGCTGCTGGTCGACTACGTCAACATACAGAACGACCGGAAGGAGAAGATCCTTGACTTCCACCATCCGGAGGACATGAAGAAGCTGCTCACGCTGGACAT CCCCGAGGACGCGGTCACACTGCAACAGCTGGTG ]
[+] EMBL BM638074 [ ccgGATCTGAGCTCCTGTGGATCCGTCCTTTGTGGATACTGTGTCCCATTGGTTTGGTGTGTGCCCCATCTGGTTGTGTAACAACTTTAGAGCACGCGAATCTGGTTGCGAATCTTATTCGGTGCCAACGGTCCACGTGAGCTTCAGGCAAAACCTGTACAGTTTTCCCGTGTATCGAACCCTGTTTTCCCTGTCGTCAGAAGGTTGTGATAGTGGGTGTGTCGGTGTGTTTGTGCGTTGAACAATTGTTACATAATCGTTGAGATAACCCATTTAAACGCCAACAGTAAATTCGAGAGAATACACAAAAACCACAGTTCATCACGCAAAACACTTTCCAGTAAAGTAGCAACACATCCCAAAAGACCCAGAAAACAACAGACAGGAAAATGACGTCGATAAACGTGGAAAAGTACAAACTGTCCGACAAAACGGCAAAGCTCACAGCCAAAGACATCATCCCGGTGGTGCAGTCGTCCGATTCGGCGGAGACGCGCGAGTTCCTGAACAAAATCGCCGAGCTGCTGGTCGACTACGTCAACATACAGAACGACCGGAAGGAGAAGATCCTTGACTTCCACCATCCGGAGGACATGAAGAAGCTGCTCACGCTGGACAT CCCCGAGGACGCGGTCACACTGCAACAGCTGGTGAAGGACTGTGCCATGACGCTCAAGTACCAGGTCAAGACAGGACATCCCCATTTCTTCAATCAG ]
[+] EMBL BM578761 [ ccgCGGAAGGAGAAGATCCTTGACTTCCACCATCCGGAGGACATGAAGAAGCTGCTCACGCTGGACAT CCCCGAGGACGCGGTCACACTGCAACAGCTGGTGAAGGACTGTGCCATGACGCTCAAGTACCAGGTCAAGACAGGACATCCCCATTTCTTCAATCAGCTGTCGTGCGGTCTTGACGTGGTGTCGATGGCGGGCGAGTGGCTGACGGCAACTGCCAACACCAACATGTTCACGTACGAAATTGCCCCAGTGTTCATCCTGATGGAGAACGTCGTGCTGTCGAAGATGCGCAAGATCATTGGCTGGGACGGTGGTGATTCGATCCTGGCGCCCGGTGGCTCCATCTCGAACCTGTACGCGTTTCTGGCCGCCCGGCACAAGATGTTCCCGAACTACAAGGAGCATGGGGCACGTGCCCTGCCCGGTGAGTTGGTCATGTTCACGTCGGACCAATGCCACTACTCGGTCAAGTCGTGTGCGGCCGTGTGTGGGCTCGGCACGGACAACTGCGTGATGGTACCGTCGGACGAGCACGGTCGTCTGATTCCGGCCGAGCTGGAGCGGCTGATTCTGGAGCGCAAGGCGCGGGGCCAGATTCCGTTCTTCGTGAATGCGACCGCCGGCACTACCGTGCTC]
consensusID : consensus_6774#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 697 fasta sequence
[GACCCACGCGTCCGCGGTTTTGTTTGGTGCGGAGATCTGAGCTCCTGTGGATCCGTCCTTTGTGGATACTGTGTCCCATTGGTTTGGTGTGTGCCCCATCTGGTTGTGTAACAACTTTAGAGCACGCGAATCTGGTTGCGAATCTTATTCGGTGCCAACGGTCCACGTGAGCTTCAGGCAAAACCTGTACAGTTTTCCCGTGTATCGAACCCTGTTTTCCCTGTCGTCAGAAGGTTGTGATAGTGGGTGTGTCGGTGTGTTTGTGCGTTGAACAATTGTTACATAATCGTTGAGATAACCCATTTAAACGCCAACAGTAAATTCGAGAGAATACACAAAAACCACAGTTCATCACGCAAAACACTTTCCAGTAAAGTAGCAACACATCCCAAAAGACCCAGAAAACAACAGACAGGAAAATGACGTCGATAAACGTGGAAAAGTACAAACTGTCCGACAAAACGGCAAAGCTCACAGCCAAAGACATCATCCCGGTGGTGCAGTCGTCCGATTCGGCGGAGACGCGCGAGTTCCTGAACAAAATCGCCGAGCTGCTGGTCGACTACGTCAACATACAGAACGACCGGAAGGAGAAGATCCTTGACTTCCACCATCCGGAGGACATGAAGAAGCTGCTCACGCTGGACATCCCCGAGGACGCGGTCACACTGCAACAGCTGGGTGAAGGACTGTGCCA]
[+] EMBL BM646590 [GACCCACGCGTCCGCGGTTTTGTTTGGTGCGGAGATCTGAGCTCCTGTGGATCCGTCCTTTGTGGATACTGTGTCCCATTGGTTTGGTGTGTGCCCCATCTGGTTGTGTAACAACTTTAGAGCACGCGAATCTGGTTGCGAATCTTATTCGGTGCCAACGGTCCACGTGAGCTTCAGGCAAAACCTGTACAGTTTTCCCGTGTATCGAACCCTGTTTTCCCTGTCGTCAGAAGGTTGTGATAGTGGGTGTGTCGGTGTGTTTGTGCGTTGAACAATTGTTACATAATCGTTGAGATAACCCATTTAAACGCCAACAGTAAATTCGAGAGAATACACAAAAACCACAGTTCATCACGCAAAACACTTTCCAGTAAAGTAGCAACACATCCCAAAAGACCCAGAAAACAACAGACAGGAAAATGACGTCGATAAACGTGGAAAAGTACAAACTGTCCGACAAAACGGCAAAGCTCACAGCCAAAGACATCATCCCGGTGGTGCAGTCGTCCGATTCGGCGGAGACGCGCGAGTTCCTGAACAAAATCGCCGAGCTGCTGGTCGACTACGTCAACATACAGAACGACCGGAAGGAGAAGATCCTTGACTTCCACCATCCGGAGGACATGAAGAAGCTGCTCACGCTGGACATCCCCGAGGACGCGGTCACACTGCAACAGCTGGGTGAAGGACTGTGCCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6774#0 CCGAGAACGTCGGACAGTACGGTTTTGTTTGGTGCGGAGATCTGAGCTCCTGTGGATCCG 60
consensus_6774#1 ----GACCCACGCGTC-CGCGGTTTTGTTTGGTGCGGAGATCTGAGCTCCTGTGGATCCG 55
** * ** *****************************************
consensus_6774#0 TCCTTTGTGGATACTGTGTCCCATTGGTTTGGTGTGTGCCCCATCTGGTTGTGTAACAAC 120
consensus_6774#1 TCCTTTGTGGATACTGTGTCCCATTGGTTTGGTGTGTGCCCCATCTGGTTGTGTAACAAC 115
************************************************************
consensus_6774#0 TTTAGAGCACGCGAATCTGGTTGCGAATCTTATTCGGTGCCAACGGTCCACGTGAGCTTC 180
consensus_6774#1 TTTAGAGCACGCGAATCTGGTTGCGAATCTTATTCGGTGCCAACGGTCCACGTGAGCTTC 175
************************************************************
consensus_6774#0 AGGCAAAACCTGTACAGTTTTCCCGTGTATCGAACCCTGTTTTCCCTGTCGTCAGAAGGT 240
consensus_6774#1 AGGCAAAACCTGTACAGTTTTCCCGTGTATCGAACCCTGTTTTCCCTGTCGTCAGAAGGT 235
************************************************************
consensus_6774#0 TGTGATAGTGGGTGTGTCGGTGTGTTTGTGCGTTGAACAATTGTTACATAATCGTTGAGA 300
consensus_6774#1 TGTGATAGTGGGTGTGTCGGTGTGTTTGTGCGTTGAACAATTGTTACATAATCGTTGAGA 295
************************************************************
consensus_6774#0 TAACCCATTTAAACGCCAACAGTAAATTCGAGAGAATACACAAAAACCACAGTTCATCAC 360
consensus_6774#1 TAACCCATTTAAACGCCAACAGTAAATTCGAGAGAATACACAAAAACCACAGTTCATCAC 355
************************************************************
consensus_6774#0 GCAAAACACTTTCCAGTAAAGTAGCAACACATCCCAAAAGACCCAGAAAACAACAGACAG 420
consensus_6774#1 GCAAAACACTTTCCAGTAAAGTAGCAACACATCCCAAAAGACCCAGAAAACAACAGACAG 415
************************************************************
consensus_6774#0 GAAAATGACGTCGATAAACGTGGAAAAGTACAAACTGTCCGACAAAACGGCAAAGCTCAC 480
consensus_6774#1 GAAAATGACGTCGATAAACGTGGAAAAGTACAAACTGTCCGACAAAACGGCAAAGCTCAC 475
************************************************************
consensus_6774#0 AGCCAAAGACATCATCCCGGTGGTGCAGTCGTCCGATTCGGCGGAGACGCGCGAGTTCCT 540
consensus_6774#1 AGCCAAAGACATCATCCCGGTGGTGCAGTCGTCCGATTCGGCGGAGACGCGCGAGTTCCT 535
************************************************************
consensus_6774#0 GAACAAAATCGCCGAGCTGCTGGTCGACTACGTCAACATACAGAACGACCGGAAGGAGAA 600
consensus_6774#1 GAACAAAATCGCCGAGCTGCTGGTCGACTACGTCAACATACAGAACGACCGGAAGGAGAA 595
************************************************************
consensus_6774#0 GATCCTTGACTTCCACCATCCGGAGGACATGAAGAAGCTGCTCACGCTGGACATCCCCGA 660
consensus_6774#1 GATCCTTGACTTCCACCATCCGGAGGACATGAAGAAGCTGCTCACGCTGGACATCCCCGA 655
************************************************************
consensus_6774#0 GGACGCGGTCACACTGCAACAGCTGG-TGAAGGACTGTGCCATGACGCTCAAGTACCAGG 719
consensus_6774#1 GGACGCGGTCACACTGCAACAGCTGGGTGAAGGACTGTGCCA------------------ 697
************************** ***************
consensus_6774#0 TCAAGACAGGACATCCCCATTTCTTCAATCAGCTGTCGTGCGGTCTTGACGTGGTGTCGA 779
consensus_6774#1 ------------------------------------------------------------
consensus_6774#0 TGGCGGGCGAGTGGCTGACGGCAACTGCCAACACCAACATGTTCACGTACGAAATTGCCC 839
consensus_6774#1 ------------------------------------------------------------
consensus_6774#0 CAGTGTTCATCCTGATGGAGAACGTCGTGCTGTCGAAGATGCGCAAGATCATTGGCTGGG 899
consensus_6774#1 ------------------------------------------------------------
consensus_6774#0 ACGGTGGTGATTCGATCCTGGCGCCCGGTGGCTCCATCTCGAACCTGTACGCGTTTCTGG 959
consensus_6774#1 ------------------------------------------------------------
consensus_6774#0 CCGCCCGGCACAAGATGTTCCCGAACTACAAGGAGCATGGGGCACGTGCCCTGCCCGGTG 1019
consensus_6774#1 ------------------------------------------------------------
consensus_6774#0 AGTTGGTCATGTTCACGTCGGACCAATGCCACTACTCGGTCAAGTCGTGTGCGGCCGTGT 1079
consensus_6774#1 ------------------------------------------------------------
consensus_6774#0 GTGGGCTCGGCACGGACAACTGCGTGATGGTACCGTCGGACGAGCACGGTCGTCTGATTC 1139
consensus_6774#1 ------------------------------------------------------------
consensus_6774#0 CGGCCGAGCTGGAGCGGCTGATTCTGGAGCGCAAGGCGCGGGGCCAGATTCCGTTCTTCG 1199
consensus_6774#1 ------------------------------------------------------------
consensus_6774#0 TGAATGCGACCGCCGGCACTACCGTGCTC 1228
consensus_6774#1 -----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||