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Anopheles gambiae
cluster # 6995 cluster # 6995       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6995#0 length = 1136 sequences # 5  
consensus_6995#1 length = 293 sequences # 1  

consensusID : consensus_6995#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1136
fasta sequence
                              [CCGCCGATCTCGATCGTGAGCATCGCGAGCTGCCCAGGAACTAGTTTGCTGTGGCGCGAAAAAGTGGCAAAAAAGTATTATCATAATAAGTTTGTGGTTATGGTGCAACTTTAGGGTGTGAATTTTGAAAACAGAGAACGAAAAAGTTTGAAAAGTTACTTACTTACATATAATAAACGAACGACCATGGCAACCATAGAGCAGCTGGGCTACAGTGCATTCTTCATTGCGCTTACCTGCATCTTCGCAATCGTAGCGCGCCGCCTGAACGAACGCATGTCGAAAGATGGGCTGGTGAAGGATTTAATTTTCGAGGCGATAGCAGCGGCAGAACTGTGCGGATGTTGCTTCGAGCTGATAATTGTGGCGGACAATTTTGGCGTCGCGACGTACGCGGTGTTCCTGTTTACGCTTACCATTTGGTGGGGCCGCAACTGGGGCTCGGCTACCGCCTGCCCTTACACCTACATGGAACAGATTGTCGAAGGTGAGGTAAGCTTCAAGGAGGCTTCGCTCAAGATCTGGGCCCAGCTGATGGGAGGCTGCTGCATATTCCGCTACGTGCAGCTGTATTGGTGGTTTGAGCTGGCAGAAACTCACGAAGGCCGTGCCTTCGAAGACTGCAAGGCGGACCTACAGGTGAACCAGTACCTCGGTGCGTTCATCGAAGGTTTTG-CGACGCTCTGCTGCCGGCTCGCATCGAAAGTGATCTCGGAGAAGGATGCCCGGTTCGGTGCGTTCATCGATTCGTTCATCGGAACGAGCCTGGTTGTTGCCGCGTTCAACTACTCGGGCGGCTACTTCAACCCGGTGCTGGCGACCGCCCTGAAGTGGGGCTGTGCGGGCAATTCCGCCCTCGAGCATATCATCGTCTACTGGATTGGATCGTGCATGGGTGCGGTGCTTTCGGTGCCACTGTTCAAGACGGCCACCTTCCGCAACATGTTCCTGACCGACACCAAGACCAAGAGCGAATAAGATGGATGACATGAGGGGGGAGGGGGGGGGGCGGTGCTTCAATAAGCGAAACCAATTTCTAGTCAACGAATGAAGCCTGTGGAAGGTTTATTTATACAACGTTTATTCAATCCTTTGAATTCTTCTACCCCTACAAGCGGCTAGCTACGAGATCTAAC]

[+] EMBL BM624218             [CCGCCGATCTCGATCGTGAGCATCGCGAGCTGCCCAGGAACTAGTTTGCTGTGGCGCGAAAAAGTGGCAAAAAAGTATTATCATAATAAGTTTGTGGTTATGGTGCAACTTTAGGGTGTGAATTTTGAAAACAGAGAACGAAAAAGTTTGAAAAGTTACTTACTTACATATAATAAACGAACGACCATGGCAACCATAGAGCAGCTGGGCTACAGTGCATTCTTCATTGCGCTTACCTGCATCTTCGCAATCGTAGCGCGCCGCCTGAACGAACGCATGTCGAAAGATGGGCTGGTGAAGGATTTAATTTTCGAGGCGATAGCAGCGGCAGAACTGTGCGGATGTTGCTTCGAGCTGATAATTGTGGCGGACAATTTTGGCGTCGCGACGTACGCGGTGTTCCTGTTTACGCTTACCATTTGGTGGGGCCGCAACTGGGGCTCGGCTACCGCCTGCCCTTACACCTACATGGAACAGATTGTCGAAGGTGAGGTAAGCTTCAAGGAGGCTTCGCTCAAGATCTGGGCCCAGCTGATGGGAGGCTGCTGCATATTCCGCTACGTTCAACTGTATTGGTGGTTTGAGCTGGCAGAAACTCACGAAGGCCGTGCCTTCGAAGACTGCAAGGCGGACCTGCAGGTGAACCAGTACCTCGGTGCGTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX610614             [                                                                                                                                                                                                                                                                                                                                                                                                GCGACGTACGCGGTGTTCCTGTTTACGCTTACCATTTGGTGGGGCCGCAACTGGGGCTCGGCTACCGCCTGCCCTTACACCTACATGGAACAGATTGTCGAAGGTGAGGTAAGCTTCAAGGAGGCTTCGCTCAAGATCTGGGCCCAGCTGATGGGAGGCTGCTGCATATTCCGCTACGTGCAGCTGTATTGGTGGTTTGAGCTGGCAGAAACTCACGAAGGCCGTGCCTTCGAAGACTGCAAGGCGGACCTACAGGTGAACCAGTACCTCGGTGCGTTCATCGAAGGTTTTG CGACGCTCTGCTGCCGGCTCGCATCGAAAGTGATCTCGGAGAAGGATGCCCGGTTCGGTGCGTTCATCGATTCGTTCATCGGAACGAGCCTGGTTGTTGCCGCGTTCAACTACTCGGGCGGCTACTTCAACCCGGTGCTGGCGACCGCCCTGAAGTGGGGCTGTGCGGGCAATTCCGCCCTCGAGCATATCATCGTCTACTGGATTGGATCGTGCATGGGTGCGGTGCTTTCGG                                                                                                                                                                                                                                  ]
[+] EMBL BX622879             [                                                                                                                                                                                                                                                                                                                                                                                                      TACGCGGTGTTCCTGTTTACGCTTACCATTTGGTGGGGCCGCAACTGGGGCTCGGCTACCGCCTGCCCTTACACCTACATGGAACAGATTGTCGAAGGTGAGGTAAGCTTCAAGGAGGCTTCGCTCAAGATCTGGGCCCAGCTGATGGGAGGCTGCTGCATATTCCGCTACGTGCAGCTGTATTGGTGGTTTGAGCTGGCAGAAACTCACGAAGGCCGTGCCTTCGAAGACTGCAAGGCGGACCTACAGGTGAACCAGTACCTCGGTGCGTTCATCGAAGGTTTTG CGACGCTCTGCTGCCGGCTCGCATCGAAAGTGATCTCGGAGAAGGATGCCCGGTTCGGTGCGTTCATCGATTCGTTCATCGGAACGAGCCTGGTTGTTGCCGCGTTCAACTACTCGGGCGGCTACTTCAACCCGGTGCTGGCGACCGCCCTGAAGTGGGGCTGTGCGGGCAATTCCGCCCTCGAGCATATCATCGTCTACTGGATTGGATCGTGCATGGGTGCGGTGCTTTCGGTGCCACTGTTCAAGACGGCCACCTTCCGCAACATGTTCCTGACCGACACCAAGACCAAGAGCGAATAAGATGGAT                                                                                                                                                       ]
[+] EMBL BX610613             [                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGGCTACCGCCTGCCCTTACACCTACATGGAACAGATTGTCGAAGGTGAGGTAAGCTTCAAGGAGGCTTCGCTCAAGATCTGGGCCCAGCTGATGGGAGGCTGCTGCATATTCCGCTACGTGCAGCTGTATTGGTGGTTTGAGCTGGCAGAAACTCACGAAGGCCGTGCCTTCGAAGACTGCAAGGCGGACCTACAGGTGAACCAGTACCTCGGTGCGTTCATCGAAGGTTTTGTCTACGCTCTGCTGCCGGCTCGCATCGAAAGTGATCTCGGAGAAGGATGCCCGGTTCGGTGCGTTCATCGATTCGTTCATCGGAACGAGCCTGGTTGTTGCCGCGTTCAACTACTCGGGCGGCTACTTCAACCCGGTGCTGGCGACCGCCCTGAAGTGGGGCTGTGCGGGCAATTCCGCCCTCGAGCATATCATCGTCTACTGGATTGGATCGTGCATGGGTGCGGTGCTTTCGGTGCCACTGTTCAAGACGGCCACCTTCCGCAACATGTTCCT                                                                                                                                                                                          ]
[+] EMBL BX626654             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCTTCGCTCAAGATCTGGGCCCAGCTGATGGGAGGCTGCTGCATATTCCGCTACGTGCAGCTGTATTGGTGGTTTGAGCTGGCAGAAACTCACGAAGGCCGTGCCTTCGAAGACTGCAAGGCGGACCTACAGGTGAACCAGTACCTCGGTGCGTTCATCGAAGGTTTTG CGACGCTCTGCTGCCGGCTCGCATCGAAAGTGATCTCGGAGAAGGATGCCCGGTTCGGTGCGTTCATCGATTCGTTCATCGGAACGAGCCTGGTTGTTGCCGCGTTCAACTACTCGGGCGGCTACTTCAACCCGGTGCTGGCGACCGCCCTGAAGTGGGGCTGTGCGGGCAATTCCGCCCTCGAGCATATCATCGTCTACTGGATTGGATCGTGCATGGGTGCGGTGCTTTCGGTGCCACTGTTCAAGACGGCCACCTTCCGCAACATGTTCCTGACCGACACCAAGACCAAGAGCGAATAAGATGGATGACATGAGGGGGGAGGGGGGGGGGCGGTGCTTCAATAAGCGAAACCAATTTCTAGTCAACGAATGAAGCCTGTGGAAGGTTTATTTATACAACGTTTATTCAATCCTTTGAATTCTTCTACCCCTACAAGCGGCTAGCTACGAGATCTAAC]


>consensus_6995#0 CCGCCGATCTCGATCGTGAGCATCGCGAGCTGCCCAGGAACTAGTTTGCTGTGGCGCGAA AAAGTGGCAAAAAAGTATTATCATAATAAGTTTGTGGTTATGGTGCAACTTTAGGGTGTG AATTTTGAAAACAGAGAACGAAAAAGTTTGAAAAGTTACTTACTTACATATAATAAACGA ACGACCATGGCAACCATAGAGCAGCTGGGCTACAGTGCATTCTTCATTGCGCTTACCTGC ATCTTCGCAATCGTAGCGCGCCGCCTGAACGAACGCATGTCGAAAGATGGGCTGGTGAAG GATTTAATTTTCGAGGCGATAGCAGCGGCAGAACTGTGCGGATGTTGCTTCGAGCTGATA ATTGTGGCGGACAATTTTGGCGTCGCGACGTACGCGGTGTTCCTGTTTACGCTTACCATT TGGTGGGGCCGCAACTGGGGCTCGGCTACCGCCTGCCCTTACACCTACATGGAACAGATT GTCGAAGGTGAGGTAAGCTTCAAGGAGGCTTCGCTCAAGATCTGGGCCCAGCTGATGGGA GGCTGCTGCATATTCCGCTACGTGCAGCTGTATTGGTGGTTTGAGCTGGCAGAAACTCAC GAAGGCCGTGCCTTCGAAGACTGCAAGGCGGACCTACAGGTGAACCAGTACCTCGGTGCG TTCATCGAAGGTTTTGCGACGCTCTGCTGCCGGCTCGCATCGAAAGTGATCTCGGAGAAG GATGCCCGGTTCGGTGCGTTCATCGATTCGTTCATCGGAACGAGCCTGGTTGTTGCCGCG TTCAACTACTCGGGCGGCTACTTCAACCCGGTGCTGGCGACCGCCCTGAAGTGGGGCTGT GCGGGCAATTCCGCCCTCGAGCATATCATCGTCTACTGGATTGGATCGTGCATGGGTGCG GTGCTTTCGGTGCCACTGTTCAAGACGGCCACCTTCCGCAACATGTTCCTGACCGACACC AAGACCAAGAGCGAATAAGATGGATGACATGAGGGGGGAGGGGGGGGGGCGGTGCTTCAA TAAGCGAAACCAATTTCTAGTCAACGAATGAAGCCTGTGGAAGGTTTATTTATACAACGT TTATTCAATCCTTTGAATTCTTCTACCCCTACAAGCGGCTAGCTACGAGATCTAAC



consensusID : consensus_6995#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 293
fasta sequence
                              [GGCCAAAGAAATGCNAGAGGGTNACTCAGAGGCTCGCTTCAGATCTGTGCCAGCTGATGGGAGGCTGCTGCATATCCGCTACGTGCAGCTGTATTGGTGGTTTGAGCTGGCGAGAAACTCACGAAGGCCGTGCCTTCGAAGACTGCAAGGGCGGACCTACAGGTGAACCAGTACCTCGGTGCGTTCATCGAAGGTTTTGCGACGCTCTGCTGCCGGCTCGCATCGAAAGTGATCTCGGAGAAGGATGCCCGGTTCGGTGCCGTTCATCGATTCGTTCATCGGGAACGAGCCTG]

[+] EMBL AL929756             [GGCCAAAGAAATGCNAGAGGGTNACTCAGAGGCTCGCTTCAGATCTGTGCCAGCTGATGGGAGGCTGCTGCATATCCGCTACGTGCAGCTGTATTGGTGGTTTGAGCTGGCGAGAAACTCACGAAGGCCGTGCCTTCGAAGACTGCAAGGGCGGACCTACAGGTGAACCAGTACCTCGGTGCGTTCATCGAAGGTTTTGCGACGCTCTGCTGCCGGCTCGCATCGAAAGTGATCTCGGAGAAGGATGCCCGGTTCGGTGCCGTTCATCGATTCGTTCATCGGGAACGAGCCTG]


>consensus_6995#1 GGCCAAAGAAATGCNAGAGGGTNACTCAGAGGCTCGCTTCAGATCTGTGCCAGCTGATGG GAGGCTGCTGCATATCCGCTACGTGCAGCTGTATTGGTGGTTTGAGCTGGCGAGAAACTC ACGAAGGCCGTGCCTTCGAAGACTGCAAGGGCGGACCTACAGGTGAACCAGTACCTCGGT GCGTTCATCGAAGGTTTTGCGACGCTCTGCTGCCGGCTCGCATCGAAAGTGATCTCGGAG AAGGATGCCCGGTTCGGTGCCGTTCATCGATTCGTTCATCGGGAACGAGCCTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6995#0      CCGCCGATCTCGATCGTGAGCATCGCGAGCTGCCCAGGAACTAGTTTGCTGTGGCGCGAA 60
consensus_6995#1      ------------------------------------------------------------
                                                                                  

consensus_6995#0      AAAGTGGCAAAAAAGTATTATCATAATAAGTTTGTGGTTATGGTGCAACTTTAGGGTGTG 120
consensus_6995#1      ------------------------------------------------------------
                                                                                  

consensus_6995#0      AATTTTGAAAACAGAGAACGAAAAAGTTTGAAAAGTTACTTACTTACATATAATAAACGA 180
consensus_6995#1      ------------------------------------------------------------
                                                                                  

consensus_6995#0      ACGACCATGGCAACCATAGAGCAGCTGGGCTACAGTGCATTCTTCATTGCGCTTACCTGC 240
consensus_6995#1      ------------------------------------------------------------
                                                                                  

consensus_6995#0      ATCTTCGCAATCGTAGCGCGCCGCCTGAACGAACGCATGTCGAAAGATGGGCTGGTGAAG 300
consensus_6995#1      ------------------------------------------------------------
                                                                                  

consensus_6995#0      GATTTAATTTTCGAGGCGATAGCAGCGGCAGAACTGTGCGGATGTTGCTTCGAGCTGATA 360
consensus_6995#1      ------------------------------------------------------------
                                                                                  

consensus_6995#0      ATTGTGGCGGACAATTTTGGCGTCGCGACGTACGCGGTGTTCCTGTTTACGCTTACCATT 420
consensus_6995#1      ------------------------------------------------------------
                                                                                  

consensus_6995#0      TGGTGGGGCCGCAACTGGGGCTCGGCTACCGCCTGCCCTTACACCTACATGGAACAGATT 480
consensus_6995#1      --------------------------------------------------------GGCC 4
                                                                              *   

consensus_6995#0      GTCGAAGGTGAGGTAAGCTTCAAGGAGGCTTCGCTCAAGATCTGGGCCCAGCTGATGGGA 540
consensus_6995#1      AAAGAAATGCNAGAGGGTNACTCAGAGGCT-CGCTTCAGATCTGTGCC-AGCTGATGGGA 62
                         ***      *   *   *   ****** ****  ******* *** ***********

consensus_6995#0      GGCTGCTGCATATTCCGCTACGTGCAGCTGTATTGGTGGTTTGAGCTGGC-AGAAACTCA 599
consensus_6995#1      GGCTGCTGCATAT-CCGCTACGTGCAGCTGTATTGGTGGTTTGAGCTGGCGAGAAACTCA 121
                      ************* ************************************ *********

consensus_6995#0      CGAAGGCCGTGCCTTCGAAGACTGCAAGG-CGGACCTACAGGTGAACCAGTACCTCGGTG 658
consensus_6995#1      CGAAGGCCGTGCCTTCGAAGACTGCAAGGGCGGACCTACAGGTGAACCAGTACCTCGGTG 181
                      ***************************** ******************************

consensus_6995#0      CGTTCATCGAAGGTTTTGCGACGCTCTGCTGCCGGCTCGCATCGAAAGTGATCTCGGAGA 718
consensus_6995#1      CGTTCATCGAAGGTTTTGCGACGCTCTGCTGCCGGCTCGCATCGAAAGTGATCTCGGAGA 241
                      ************************************************************

consensus_6995#0      AGGATGCCCGGTTCGGTGC-GTTCATCGATTCGTTCATCGG-AACGAGCCTGGTTGTTGC 776
consensus_6995#1      AGGATGCCCGGTTCGGTGCCGTTCATCGATTCGTTCATCGGGAACGAGCCTG-------- 293
                      ******************* ********************* **********        

consensus_6995#0      CGCGTTCAACTACTCGGGCGGCTACTTCAACCCGGTGCTGGCGACCGCCCTGAAGTGGGG 836
consensus_6995#1      ------------------------------------------------------------
                                                                                  

consensus_6995#0      CTGTGCGGGCAATTCCGCCCTCGAGCATATCATCGTCTACTGGATTGGATCGTGCATGGG 896
consensus_6995#1      ------------------------------------------------------------
                                                                                  

consensus_6995#0      TGCGGTGCTTTCGGTGCCACTGTTCAAGACGGCCACCTTCCGCAACATGTTCCTGACCGA 956
consensus_6995#1      ------------------------------------------------------------
                                                                                  

consensus_6995#0      CACCAAGACCAAGAGCGAATAAGATGGATGACATGAGGGGGGAGGGGGGGGGGCGGTGCT 1016
consensus_6995#1      ------------------------------------------------------------
                                                                                  

consensus_6995#0      TCAATAAGCGAAACCAATTTCTAGTCAACGAATGAAGCCTGTGGAAGGTTTATTTATACA 1076
consensus_6995#1      ------------------------------------------------------------
                                                                                  

consensus_6995#0      ACGTTTATTCAATCCTTTGAATTCTTCTACCCCTACAAGCGGCTAGCTACGAGATCTAAC 1136
consensus_6995#1      ------------------------------------------------------------
                                                                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)