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Anopheles gambiae
cluster # 7005 cluster # 7005       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7005#0 length = 857 sequences # 2  
consensus_7005#1 length = 694 sequences # 1  
consensus_7005#2 length = 681 sequences # 1  
consensus_7005#3 length = 679 sequences # 1  
consensus_7005#4 length = 428 sequences # 1  

consensusID : consensus_7005#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 857
fasta sequence
                              [GCCGCGGAATTCCTCGAGAACTGTTGGCCCACTGGAGTTCCGAGTGTGTTTTTGCATTGAATTGAATTAACATCAGGTTCCCGGGCAGCACGCAGAACGCAGATTTCCCTTTTCCCGGCAGCACGAACGGACCCGGTCAACTTTCGGCAGCGGGCCCGGCAGCGATGCATGCCATCAAGCGCTACTCCATGGATTACGTCAACTCGAAGGAATTCCAGGATGAAATGGAAGGTCCTGTGACGAAAAGTATTCGCGCTCACGTCCGCCCTGAT-CTGCGGAATCTGGTTGTTTATACAAATTCCGCCAAAAGAAGCCTTCGTATGTACGAAGCACACCTGGCCGGTTTCGCGCTTAGCAATGTCGAGTCGAGCCGCACGGTAGCGCAGCTACTGTTTGAAATGAACGACACGGGGCCCCGGGCCGAATTTGTGCGACAATTTGCCGCGCAAGCGGTTCTCCCTCATGACGCATCTGCTCGATCGGCACTGTACGGCGGATTCGTTTAAAACGGCCGTACAAAGACGGCTTGCCGGTGGACCACAGCAACCGGTACAACCGTACCCGGTTACTCTGATACGCCAGCCAGCACCGGCCAATGCAGCGATCGCAAACAATGCACGCGAGAAACACGCAAAATAAGAAGCGAGCCTTATGAAACACATTTCTTCTTTTCGTTTACCGCACACCATTGCGTCGTTGAGGTTGCGTTTGTAAAATATAAAGTGCATGTTTCTTTTTTTTACACAGATGCGTACTATTATAAGCTAGCAGAGTATCAAAGAACTTCAAGTCAAAGTATAATAAAAAAAATCGAGAAAAAAAAAAAAAAAAAAAAAAGGCCACATGGTGCCCGGGGG]

[-] EMBL CNS08CEW             [GCCGCGGAATTCCTCGAGAACTGTTGGCCCACTGGAGTTCCGAGTGTGTTTTTGCATTGAATTGAATTAACATCAGGTTCCCGGGCAGCACGCAGAACGCAGATTTCCCTTTTCCCGGCAGCACGAACGGACCCGGTCAACTTTCGGCAGCGGGCCCGGCAGCGATGCATGCCATCAAGCGCTACTCCATGGATTACGTCAACTCGAAGGAATTCCAGGATGAAATGGAAGGTCCTGTGACGAAAAGTATTCGCGCTCACGTCCGCCCTGAT CTGCGGAATCTGGTTGTTTATACAAATTCCGCCAAAAGAAGCCTTCGTATGTACGAAGCACACCTGGCCGGTTTCGCGCTTAGCAATGTCGAGTCGAGCCGCACGGTAGCGCAGCTACTGTTTGAAATGAACGACACGGGGCCCCGGGCCGAATTTGTGCGACAATTTGCCGCGCAAGCGGTTCTCCCTCATGACGCATCTGCTCGATCGGCACTGTACGGCGGATTCGTTTAAAACGGCCGTACAAAGACGGCTTGCCGGTGGACCACAGCAACCGGTACAACCGTACCCGGTTACTCTGATACGCCAGCCAGCACCGGCCAATGCAGCGATCGCAAACAATGCACGCGAGAAACACGCAAAATAAGAAGCGAGCCTTATGAAACACATTTCTTCTTTTCGTTTACCGCACACCATTGCGTCGTTGAGGTTGCGTTTGTAAAATATAAAGTGCATGTTTCTTTTTTTTACACAGATGCGTACTA                                                                                                    ]
[+] EMBL CNS08CEV             [                                              TGTGTTTGCATTGAATTGAATTAACATCAGGTTCCCGGGCAGCACGCAGAACGCAGATTTCCCTTTTCCCGGCAGCACGAACGGACCCGGTCAACTGTCGGCAGCGGGCCCGGCAGCGATGCATGCCATCAAGCGCTACTCCATGGATTACGTCAACTCGAAGGAATTCCAGGATGAAATGGAAGGTCCTGTGACGAAAAGTATTCG GCTCACGTCCGCCCTGATCCTGCGGAATCTGGTTGTTTATACAAATTCCGCCAAAAGAAGCCTTCGTATGTACGAAGCACACCTGGCCGGTGTCGCGCTTAGCAATGTCGAGTCGAGCCGCACGGTAGCGCA CTACTGTTTGAAATGAACGACACGGGGCCCCGGGCCGAATTTGTGCGACAATTTGCCGCGCAA  GTTTCTCCCTCATGACGCATCTGCTCGATCGGCACTGTACGGCGGATTCGTTTAAAACGGCCGTACAAAGACGGCTTGCCGGTGGACCACAGCAACCGGTACAACCGTACCCGGTGACTCTGATACGCCAGCCAGCACCGGCCAATGCAGCGATCGCAAACAATGCACGCGAGAAACACGCAAAATAAGAAGCGAGCCTTATGAAACACATTTCTTCTTTTCGTTTACCGCACACCATTGCGTCGTTGAGGTTGCGTTTGTAAAATATAAAGTGCATGTTTCTTTTTTTTACACAGATGCGTACTATTATAAGCTAGCAGAGTATCAAAGAACTTCAAGTCAAAGTATAATAAAAAAAATCGAGAAAAAAAAAAAAAAAAAAAAAAGGCCACATGGTGCCCGGGGG]


>consensus_7005#0 GCCGCGGAATTCCTCGAGAACTGTTGGCCCACTGGAGTTCCGAGTGTGTTTTTGCATTGA ATTGAATTAACATCAGGTTCCCGGGCAGCACGCAGAACGCAGATTTCCCTTTTCCCGGCA GCACGAACGGACCCGGTCAACTTTCGGCAGCGGGCCCGGCAGCGATGCATGCCATCAAGC GCTACTCCATGGATTACGTCAACTCGAAGGAATTCCAGGATGAAATGGAAGGTCCTGTGA CGAAAAGTATTCGCGCTCACGTCCGCCCTGATCTGCGGAATCTGGTTGTTTATACAAATT CCGCCAAAAGAAGCCTTCGTATGTACGAAGCACACCTGGCCGGTTTCGCGCTTAGCAATG TCGAGTCGAGCCGCACGGTAGCGCAGCTACTGTTTGAAATGAACGACACGGGGCCCCGGG CCGAATTTGTGCGACAATTTGCCGCGCAAGCGGTTCTCCCTCATGACGCATCTGCTCGAT CGGCACTGTACGGCGGATTCGTTTAAAACGGCCGTACAAAGACGGCTTGCCGGTGGACCA CAGCAACCGGTACAACCGTACCCGGTTACTCTGATACGCCAGCCAGCACCGGCCAATGCA GCGATCGCAAACAATGCACGCGAGAAACACGCAAAATAAGAAGCGAGCCTTATGAAACAC ATTTCTTCTTTTCGTTTACCGCACACCATTGCGTCGTTGAGGTTGCGTTTGTAAAATATA AAGTGCATGTTTCTTTTTTTTACACAGATGCGTACTATTATAAGCTAGCAGAGTATCAAA GAACTTCAAGTCAAAGTATAATAAAAAAAATCGAGAAAAAAAAAAAAAAAAAAAAAAGGC CACATGGTGCCCGGGGG



consensusID : consensus_7005#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 694
fasta sequence
                              [CCGCCCACGCGTCCGTGCGATTGGCGCGGCTGCCCGAGGAAAAAGTTCCAGTCCGCGACGGAGGTGTTCCGGCACGCCTGCACCGTCCACTGTCCCGATACGGTGGATGTGTCCGCCGACATCTACTGCCAGTGGGGCCCCGGGCCGAATTTGTGCGACAATTTGCCACGCAAGCGGTTCTCCCTCATGACGCATCTGCTCGATCGGCACTGCACGGCGGATTCATTTAAAACGGCCGTACAAAGACGTCTTGCCGGTGGACCACAGCAACCGGTACAACCGTACCCGGTGACTCTGATACGTCAGCCAGCACCGGCCAATGCAGCGATCGCAAACAGTAGCAGTGCATCGACAGCACCGTCATCGGCGGGTGATCGAGGATCTCCGGCACCGGCCTCCTGCACCAAGGTGGAGTCGACCGGTGGCACATCGGAGGGCAGCAGCGGCAGCGGCAGCAGCAGCACGAACGGTCAACTGTCGGCAGCGGGCCCGGCAGCGATGCATGCCATCAAGCGCTACTCAATGGATTACGTCAACTCGAAGGAATTCCAGGATGAAATGGAAGGTCCTGTGACGAAAAGTATTCGACTCACGTCCGCCCTGATCCTGCGGAATCTGGTTGTTTACACAAATTCCGCCAAAAGAAGCCTTCGTATGTACGAAGCACACCTTGGCCGGTGTCGCGCTTAACAAT]

[+] EMBL BM586168             [CCGCCCACGCGTCCGTGCGATTGGCGCGGCTGCCCGAGGAAAAAGTTCCAGTCCGCGACGGAGGTGTTCCGGCACGCCTGCACCGTCCACTGTCCCGATACGGTGGATGTGTCCGCCGACATCTACTGCCAGTGGGGCCCCGGGCCGAATTTGTGCGACAATTTGCCACGCAAGCGGTTCTCCCTCATGACGCATCTGCTCGATCGGCACTGCACGGCGGATTCATTTAAAACGGCCGTACAAAGACGTCTTGCCGGTGGACCACAGCAACCGGTACAACCGTACCCGGTGACTCTGATACGTCAGCCAGCACCGGCCAATGCAGCGATCGCAAACAGTAGCAGTGCATCGACAGCACCGTCATCGGCGGGTGATCGAGGATCTCCGGCACCGGCCTCCTGCACCAAGGTGGAGTCGACCGGTGGCACATCGGAGGGCAGCAGCGGCAGCGGCAGCAGCAGCACGAACGGTCAACTGTCGGCAGCGGGCCCGGCAGCGATGCATGCCATCAAGCGCTACTCAATGGATTACGTCAACTCGAAGGAATTCCAGGATGAAATGGAAGGTCCTGTGACGAAAAGTATTCGACTCACGTCCGCCCTGATCCTGCGGAATCTGGTTGTTTACACAAATTCCGCCAAAAGAAGCCTTCGTATGTACGAAGCACACCTTGGCCGGTGTCGCGCTTAACAAT]


>consensus_7005#1 CCGCCCACGCGTCCGTGCGATTGGCGCGGCTGCCCGAGGAAAAAGTTCCAGTCCGCGACG GAGGTGTTCCGGCACGCCTGCACCGTCCACTGTCCCGATACGGTGGATGTGTCCGCCGAC ATCTACTGCCAGTGGGGCCCCGGGCCGAATTTGTGCGACAATTTGCCACGCAAGCGGTTC TCCCTCATGACGCATCTGCTCGATCGGCACTGCACGGCGGATTCATTTAAAACGGCCGTA CAAAGACGTCTTGCCGGTGGACCACAGCAACCGGTACAACCGTACCCGGTGACTCTGATA CGTCAGCCAGCACCGGCCAATGCAGCGATCGCAAACAGTAGCAGTGCATCGACAGCACCG TCATCGGCGGGTGATCGAGGATCTCCGGCACCGGCCTCCTGCACCAAGGTGGAGTCGACC GGTGGCACATCGGAGGGCAGCAGCGGCAGCGGCAGCAGCAGCACGAACGGTCAACTGTCG GCAGCGGGCCCGGCAGCGATGCATGCCATCAAGCGCTACTCAATGGATTACGTCAACTCG AAGGAATTCCAGGATGAAATGGAAGGTCCTGTGACGAAAAGTATTCGACTCACGTCCGCC CTGATCCTGCGGAATCTGGTTGTTTACACAAATTCCGCCAAAAGAAGCCTTCGTATGTAC GAAGCACACCTTGGCCGGTGTCGCGCTTAACAAT



consensusID : consensus_7005#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 681
fasta sequence
                              [GGTGACTCTGATACGTCAGCCAGCACCGGCCAANCGCAGCGATCGCAAACAGTACCAAGTGTCATCGNCTAGCACCTGTCATCGCGGNTGTATCGAGGATCTCCGGCACCGGCCTCNCTGCACCAAGTGTGGAGTCGACCGGTGCCACATCGGAGGCCACCANCGCCAGCCGCCANCAGCAGCACGACCGGACCCGGTCAACTGGTCGCCAGCGGCCCGGCAGCGATGCAGCCCATCAAGCGCTACTCAATGGATTACNGTCAACTCGAAGGAATTCCAGGATGATATATGGAAGGTCCTGTGACGAAAAGTATTCGGCTCACGTCCGCCCTGATCCTCGGAATCTGTTGTTTACACAAATTCCGCCATAAAGAAGCCTTCGTATGTACGATAGCACACNNTGGCCGGTTTCGCACTTAGCAATGTCGAGTCGAGCCGCACGGTAGCGCAGCTACTGTTTGAAATGAACGACACGGGGCCCAACTACTGAGAACCGTCGATCTCTGCACCCAGATCCCAGAGGTATTAAAGGAATTTCAACGCTGATGACGACGTTATTTTAATGTTAAACTATGCATTTTATCTTATTCTTAACGTGTTGCTGATGCACGCGAGAAACACGCAAAATAAGAAGCGAGCCTTATGAAACACAAAGNAAAAAAAAAAAAATAACCTGCGGGC]

[-] EMBL AL929848             [GGTGACTCTGATACGTCAGCCAGCACCGGCCAANCGCAGCGATCGCAAACAGTACCAAGTGTCATCGNCTAGCACCTGTCATCGCGGNTGTATCGAGGATCTCCGGCACCGGCCTCNCTGCACCAAGTGTGGAGTCGACCGGTGCCACATCGGAGGCCACCANCGCCAGCCGCCANCAGCAGCACGACCGGACCCGGTCAACTGGTCGCCAGCGGCCCGGCAGCGATGCAGCCCATCAAGCGCTACTCAATGGATTACNGTCAACTCGAAGGAATTCCAGGATGATATATGGAAGGTCCTGTGACGAAAAGTATTCGGCTCACGTCCGCCCTGATCCTCGGAATCTGTTGTTTACACAAATTCCGCCATAAAGAAGCCTTCGTATGTACGATAGCACACNNTGGCCGGTTTCGCACTTAGCAATGTCGAGTCGAGCCGCACGGTAGCGCAGCTACTGTTTGAAATGAACGACACGGGGCCCAACTACTGAGAACCGTCGATCTCTGCACCCAGATCCCAGAGGTATTAAAGGAATTTCAACGCTGATGACGACGTTATTTTAATGTTAAACTATGCATTTTATCTTATTCTTAACGTGTTGCTGATGCACGCGAGAAACACGCAAAATAAGAAGCGAGCCTTATGAAACACAAAGNAAAAAAAAAAAAATAACCTGCGGGC]


>consensus_7005#2 GGTGACTCTGATACGTCAGCCAGCACCGGCCAANCGCAGCGATCGCAAACAGTACCAAGT GTCATCGNCTAGCACCTGTCATCGCGGNTGTATCGAGGATCTCCGGCACCGGCCTCNCTG CACCAAGTGTGGAGTCGACCGGTGCCACATCGGAGGCCACCANCGCCAGCCGCCANCAGC AGCACGACCGGACCCGGTCAACTGGTCGCCAGCGGCCCGGCAGCGATGCAGCCCATCAAG CGCTACTCAATGGATTACNGTCAACTCGAAGGAATTCCAGGATGATATATGGAAGGTCCT GTGACGAAAAGTATTCGGCTCACGTCCGCCCTGATCCTCGGAATCTGTTGTTTACACAAA TTCCGCCATAAAGAAGCCTTCGTATGTACGATAGCACACNNTGGCCGGTTTCGCACTTAG CAATGTCGAGTCGAGCCGCACGGTAGCGCAGCTACTGTTTGAAATGAACGACACGGGGCC CAACTACTGAGAACCGTCGATCTCTGCACCCAGATCCCAGAGGTATTAAAGGAATTTCAA CGCTGATGACGACGTTATTTTAATGTTAAACTATGCATTTTATCTTATTCTTAACGTGTT GCTGATGCACGCGAGAAACACGCAAAATAAGAAGCGAGCCTTATGAAACACAAAGNAAAA AAAAAAAAATAACCTGCGGGC



consensusID : consensus_7005#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence
                              [CCGCAGCGATTCCGGCACATTCGGCAACAACACCAACCACCACCAGCACGATCACGAGCGGACAGTTCGCCGCGTCCCTTATGGCCCAGGCAGCCGGACTAAACGTCCCCGTTACAACGACCACGTCAGCAACAGTATCAGCAGCCACAGCGTCCTCTATATCCACTTCATCTGTCCCTGCTGCTGCTTCTGCTCAACCAACAGTAACAGCGCAACCGCCTCCACAACCACCACCACCACCACCGAATGCGAACACAATCACGATTCCGGTGTCGGTTGCGACGGCCAACGGCGGTACGTCCACCTCCATCCAGATGATCCCTGCGATGGACCCGCAAAAGATCGTCGAAGAGGACGTCGATCCGAGCTGGCCGTGGGTGTGCGATTGGCGCGGGTGCCCGAGGAAAAAGTTCCAGTCCGCGACGGAGGTGTTCCGGCACGCCTGCACCGTCCACTGTCCCGATACGGTGGATGTGTCCGCCGACATCTACTGCCAGTGGGGCCCCGGGCCGAATTTGTGCGACAATTTGCCGCGCAAGCGGTTCTCCCTCATGACGCATCTGCTCGATCGGCACTGTACGGCGGATTCGTTTAAAACGGCCGTACAAAGACGGCTTGCCGGTGGACCACAGCAACCGGTACAACCGTACCCGGTGACTCTGATACGTCAGCCAGCACC]

[+] EMBL BM619267             [CCGCAGCGATTCCGGCACATTCGGCAACAACACCAACCACCACCAGCACGATCACGAGCGGACAGTTCGCCGCGTCCCTTATGGCCCAGGCAGCCGGACTAAACGTCCCCGTTACAACGACCACGTCAGCAACAGTATCAGCAGCCACAGCGTCCTCTATATCCACTTCATCTGTCCCTGCTGCTGCTTCTGCTCAACCAACAGTAACAGCGCAACCGCCTCCACAACCACCACCACCACCACCGAATGCGAACACAATCACGATTCCGGTGTCGGTTGCGACGGCCAACGGCGGTACGTCCACCTCCATCCAGATGATCCCTGCGATGGACCCGCAAAAGATCGTCGAAGAGGACGTCGATCCGAGCTGGCCGTGGGTGTGCGATTGGCGCGGGTGCCCGAGGAAAAAGTTCCAGTCCGCGACGGAGGTGTTCCGGCACGCCTGCACCGTCCACTGTCCCGATACGGTGGATGTGTCCGCCGACATCTACTGCCAGTGGGGCCCCGGGCCGAATTTGTGCGACAATTTGCCGCGCAAGCGGTTCTCCCTCATGACGCATCTGCTCGATCGGCACTGTACGGCGGATTCGTTTAAAACGGCCGTACAAAGACGGCTTGCCGGTGGACCACAGCAACCGGTACAACCGTACCCGGTGACTCTGATACGTCAGCCAGCACC]


>consensus_7005#3 CCGCAGCGATTCCGGCACATTCGGCAACAACACCAACCACCACCAGCACGATCACGAGCG GACAGTTCGCCGCGTCCCTTATGGCCCAGGCAGCCGGACTAAACGTCCCCGTTACAACGA CCACGTCAGCAACAGTATCAGCAGCCACAGCGTCCTCTATATCCACTTCATCTGTCCCTG CTGCTGCTTCTGCTCAACCAACAGTAACAGCGCAACCGCCTCCACAACCACCACCACCAC CACCGAATGCGAACACAATCACGATTCCGGTGTCGGTTGCGACGGCCAACGGCGGTACGT CCACCTCCATCCAGATGATCCCTGCGATGGACCCGCAAAAGATCGTCGAAGAGGACGTCG ATCCGAGCTGGCCGTGGGTGTGCGATTGGCGCGGGTGCCCGAGGAAAAAGTTCCAGTCCG CGACGGAGGTGTTCCGGCACGCCTGCACCGTCCACTGTCCCGATACGGTGGATGTGTCCG CCGACATCTACTGCCAGTGGGGCCCCGGGCCGAATTTGTGCGACAATTTGCCGCGCAAGC GGTTCTCCCTCATGACGCATCTGCTCGATCGGCACTGTACGGCGGATTCGTTTAAAACGG CCGTACAAAGACGGCTTGCCGGTGGACCACAGCAACCGGTACAACCGTACCCGGTGACTC TGATACGTCAGCCAGCACC



consensusID : consensus_7005#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 428
fasta sequence
                              [CCGTTCGCTTCGCATTTCGTTTGTACGTACGTCGCGCTTCGCAGTTCCGAGTGTGTGTTTGCATTGAATTGAATTAACATCAGGTTCCCGGGCAGCACGCAGAACGCAGATTTCCCTTTTCCCGGCAGTGCGACAAACATGCGATTGGCACAATGACGACGGACGTAGTGAAAATAGAACGCACCGGCGTGCCGATGGCCATCGACGAGAGCACGAACGATGCGAGCGGTGCCAGCTTCAGCAGAGTCAGTGGTGGTGGTGGTGGTGCAGCCGGTGTTGGCGGTGGCGGGACCGTCGCCGGAAGCGCAGCCGGAACACCGAGGGAATCGGCTAAATCGCAAAACCTGCGCCGCACCCTGGCCAAGCCAGCGATGGAGAAGGATAAGTGCAGCTTCCTGAACGATCTGCAGACATTTCACGAGAAGCAC]

[+] EMBL BM610848             [CCGTTCGCTTCGCATTTCGTTTGTACGTACGTCGCGCTTCGCAGTTCCGAGTGTGTGTTTGCATTGAATTGAATTAACATCAGGTTCCCGGGCAGCACGCAGAACGCAGATTTCCCTTTTCCCGGCAGTGCGACAAACATGCGATTGGCACAATGACGACGGACGTAGTGAAAATAGAACGCACCGGCGTGCCGATGGCCATCGACGAGAGCACGAACGATGCGAGCGGTGCCAGCTTCAGCAGAGTCAGTGGTGGTGGTGGTGGTGCAGCCGGTGTTGGCGGTGGCGGGACCGTCGCCGGAAGCGCAGCCGGAACACCGAGGGAATCGGCTAAATCGCAAAACCTGCGCCGCACCCTGGCCAAGCCAGCGATGGAGAAGGATAAGTGCAGCTTCCTGAACGATCTGCAGACATTTCACGAGAAGCAC]


>consensus_7005#4 CCGTTCGCTTCGCATTTCGTTTGTACGTACGTCGCGCTTCGCAGTTCCGAGTGTGTGTTT GCATTGAATTGAATTAACATCAGGTTCCCGGGCAGCACGCAGAACGCAGATTTCCCTTTT CCCGGCAGTGCGACAAACATGCGATTGGCACAATGACGACGGACGTAGTGAAAATAGAAC GCACCGGCGTGCCGATGGCCATCGACGAGAGCACGAACGATGCGAGCGGTGCCAGCTTCA GCAGAGTCAGTGGTGGTGGTGGTGGTGCAGCCGGTGTTGGCGGTGGCGGGACCGTCGCCG GAAGCGCAGCCGGAACACCGAGGGAATCGGCTAAATCGCAAAACCTGCGCCGCACCCTGG CCAAGCCAGCGATGGAGAAGGATAAGTGCAGCTTCCTGAACGATCTGCAGACATTTCACG AGAAGCAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7005#1      CCGCCCACGCGTCCGTGCGATTGGCGCGGCTGCCCGAGGAAAAAGTTCCAGTCCGCGACG 60
consensus_7005#2      ------------------------------------------------------------
consensus_7005#0      ------------------------------------------------------------
consensus_7005#3      ------------------------------------------------------------
consensus_7005#4      ------------------------------------------------------------
                                                                                  

consensus_7005#1      GAGGTGTTCCGGCACGCCTGCACCGTCCACTGTCCCGATACGGTGGATGTGTCCGCCGAC 120
consensus_7005#2      ------------------------------------------------------------
consensus_7005#0      ------------------------------------------------------------
consensus_7005#3      ------------------------------------------------------------
consensus_7005#4      ------------------------------------------------------------
                                                                                  

consensus_7005#1      ATCTACTGCCAGTGGGGCCCCGGGCCGAATTTGTGCGACAATTTGCCACGCAAGCGGTTC 180
consensus_7005#2      ------------------------------------------------------------
consensus_7005#0      ------------------------------------------------------------
consensus_7005#3      ------------------------------------------------------------
consensus_7005#4      ------------------------------------------------------------
                                                                                  

consensus_7005#1      TCCCTCATGACGCATCTGCTCGATCGGCACTGCACGGCGGATTCATTTAAAACGGCCGTA 240
consensus_7005#2      ------------------------------------------------------------
consensus_7005#0      ------------------------------------------------------------
consensus_7005#3      ------------------------------------------------------------
consensus_7005#4      ------------------------------------------------------------
                                                                                  

consensus_7005#1      CAAAGACGTCTTGCCGGTGGACCACAGCAACCGGTACAACCGTACCCGGTGACTCTGATA 300
consensus_7005#2      -----------------------------------------------GGTGACTCTGATA 13
consensus_7005#0      ------------------------------------------------------------
consensus_7005#3      -------------------------------------------CCGCAGCGATTCCGGCA 17
consensus_7005#4      ------------------------------------------------------------
                                                                                  

consensus_7005#1      CGTCAGCCAGCACCGGCCAAT-GCAGCGATCGCAAACAGTAGCA-GTG-CATCGAC-AGC 356
consensus_7005#2      CGTCAGCCAGCACCGGCCAANCGCAGCGATCGCAAACAGTACCAAGTGTCATCGNCTAGC 73
consensus_7005#0      ----------------------------------------GCCGCGGA-ATTCCTCGAGA 19
consensus_7005#3      CATTCGGCAACAACA-CCAACCACCACCAGCACGATCACGAGCGGACA-GTTCGCCGCGT 75
consensus_7005#4      -----------------------------------CCGTTCGCTTCGCATTTCGTTTGTA 25
                                                                *        **       

consensus_7005#1      ACC--GTCATCGG--CGGGTG-ATCGAGGAT-CTC-CGGCACCGGCCTCC-TGCACCAAG 408
consensus_7005#2      ACCT-GTCATCG---CGGNTGTATCGAGGAT-CTC-CGGCACCGGCCTCNCTGCACCAAG 127
consensus_7005#0      ACTG-TTGGCCCA--CTGGAGTTCCGAGTGTGTTT-TTGCATTGA----ATTGAATTAAC 71
consensus_7005#3      CCCTTATGGCCCAGGCAGCCGGACTAAACGTCCCCGTTACAACGACCACGTCAGCAACAG 135
consensus_7005#4      CGTACGTCGCGCT--TCGCAGTTCCGAGTGTGTGT-TTGCATTGA----ATTGAATTAAC 78
                            *          *  *     *   *        **  *              * 

consensus_7005#1      -GTGGAGTCGACCGGTGGCACATCGGAGGGCAGCAGCGGCAGCGGC-AGCA-----GCAG 461
consensus_7005#2      TGTGGAGTCGACCGGTGCCACATCGGAGGCCACCANCGCCAGCCGCCANCA-----GCAG 182
consensus_7005#0      -ATCAGGTTCCCGGGCAGCACGCAGAACG----CAGATTTCCCTTTTCCCG-----GCAG 121
consensus_7005#3      TATCAGCAGCCACAGCGTCCTCTATATCCACTTCATCTGTCCCTGCTGCTGCTTCTGCTC 195
consensus_7005#4      -ATCAGGTTCCCGGGCAGCACGCAGAACG----CAGATTTCCCTTTTCCCG-----GCAG 128
                        *           *   *              **       *             **  

consensus_7005#1      CACGAACGG------T-CAACTG--TCGGCAGCGGGC-CCGGCAGCGATGCATGCCATCA 511
consensus_7005#2      CACGACCGGACCCGGT-CAACTGG-TCGCCAGCGG-C-CCGGCAGCGATGCAGCCCATCA 238
consensus_7005#0      CACGAACGGACCCGGT-CAACTT--TCGGCAGCGGGC-CCGGCAGCGATGCATGCCATCA 177
consensus_7005#3      AACCAACAGTAACAGCGCAACCGCCTCCACAACCACCACCACCACCACCGAATGCGAACA 255
consensus_7005#4      TGCGACAAAC----ATGCGATTGGCACAATGACGA----CGGACGTAGTGAAAATAGAAC 180
                        * *            * *      *     *      *         * *        

consensus_7005#1      --AGCGCTACTCAA---TGGATTACG-TCAACT-CGAAGGAATTC-CAGGATGAAAT--G 561
consensus_7005#2      --AGCGCTACTCAA---TGGATTACNGTCAACT-CGAAGGAATTC-CAGGATGATATATG 291
consensus_7005#0      --AGCGCTACTCCA---TGGATTACG-TCAACT-CGAAGGAATTC-CAGGATGAAAT--G 227
consensus_7005#3      CAATCACGATTCCGGTGTCGGTTGCGACGGCCAACGGCGGTACGT-CCACCTCCATCCAG 314
consensus_7005#4      GCACCGGCGTGCCGATGGCCATCGACGAGAGCACGAACGATGCGAGCGGTGCCAGCTTCA 240
                        * *      *         *         *      *       *             

consensus_7005#1      GAAGGTCCTGTGACG--------AAAAGTATTCG--ACTCACGTCCGCCCTGATCCTGCG 611
consensus_7005#2      GAAGGTCCTGTGACG--------AAAAGTATTCG--GCTCACGTCCGCCCTGATCCT-CG 340
consensus_7005#0      GAAGGTCCTGTGACG--------AAAAGTATTCGC-GCTCACGTCCGCCCTGATC-TGCG 277
consensus_7005#3      ATGATCCCTGCGATGGACCCGCAAAAGATCGTCGAAGAGGACGTCGATCCGAGCTGGCCG 374
consensus_7005#4      GCAGAGTCAGTGGTGGT------GGTGGTGGT-GCAGCCGGTGTTGGCGGTGGCGGGACC 293
                             * * *  *             *  * *        **              * 

consensus_7005#1      GAATCTGGTTGTTTACACAAATTCCGCCA-AAAGAAGCCT--TCGTATGTACGA-AGCAC 667
consensus_7005#2      GAATCTG-TTGTTTACACAAATTCCGCCATAAAGAAGCCT--TCGTATGTACGATAGCAC 397
consensus_7005#0      GAATCTGGTTGTTTATACAAATTCCGCCA-AAAGAAGCCT--TCGTATGTACGA-AGCAC 333
consensus_7005#3      TGGGTGTGCGATTGGCGCGGGTGCC-CGAGGAAAAAGTTC--CAGTCCGCGACGGAG-GT 430
consensus_7005#4      GTCGCCGGAAGCGCAGCCGGAACACCGAGGGAATCGGCTAAATCGCAAAACCTGCGCCGC 353
                                       *      *      **   *       *               

consensus_7005#1      ACCTTGGCCGGTGTCGCGCTTAACAAT--------------------------------- 694
consensus_7005#2      ACNNTGGCCGGTTTCGCACTTAGCAATGTCGAGTCGAGCCGCACGGTAGCGCAGCTACTG 457
consensus_7005#0      ACCT-GGCCGGTTTCGCGCTTAGCAATGTCGAGTCGAGCCGCACGGTAGCGCAGCTACTG 392
consensus_7005#3      GTTCCGGCACGCCT-GCACCGTCCACTGTCCCGATACGGTGGATGTGTCCGCCGACATCT 489
consensus_7005#4      ACCCTGGCCAAGCCAGCGATGGAGAAGGATAAGTGCAGCTTCCTGAACGATCTGCAGACA 413
                           ***       **       *                                   

consensus_7005#1      ------------------------------------------------------------
consensus_7005#2      TTTGAAATGAACGACACGGGGCCCAACTACTGAGAACCGTCGATCTCTGCACCCAGATCC 517
consensus_7005#0      TTTGAAATGAACGACACGGGGCCCCGG-GCCGAATTTGTGCGACAATTTGCCGCGCAAGC 451
consensus_7005#3      ACTGCCA--------GTGGGGCCCCGG-GCCGAATTTGTGCGACAATTTGCCGCGCAAGC 540
consensus_7005#4      TTTCACGAGAAGCAC--------------------------------------------- 428
                                                                                  

consensus_7005#1      ------------------------------------------------------------
consensus_7005#2      CAGAGGTATTAAAGGAATTTCAACGCTGATGACGACGTTATTTTAATGTTAAACTATGCA 577
consensus_7005#0      GGTTCTCCCTCATGACGCATCTGCTCGATCGGC------ACTGTACGGCGGATTCGTTTA 505
consensus_7005#3      GGTTCTCCCTCATGACGCATCTGCTCGATCGGC------ACTGTACGGCGGATTCGTTTA 594
consensus_7005#4      ------------------------------------------------------------
                                                                                  

consensus_7005#1      ------------------------------------------------------------
consensus_7005#2      TTTTATCTTATTCTTAACGTGTTGCTGATGCACGCGAGAAACACGCAAAATAAGAAGCGA 637
consensus_7005#0      AAACGGCCGTACAAAGACGGCTTGCCGGTGGACCACAGCAACCGGTACAACCGTACCCGG 565
consensus_7005#3      AAACGGCCGTACAAAGACGGCTTGCCGGTGGACCACAGCAACCGGTACAACCGTACCCGG 654
consensus_7005#4      ------------------------------------------------------------
                                                                                  

consensus_7005#1      ------------------------------------------------------------
consensus_7005#2      GCCTTATGAAACACAAAGNAAAAAAAAAAAAATAACCTGCGGGC---------------- 681
consensus_7005#0      TTACTCTGATACGCCAGCCAGCACCGGCCAATGCAGCGATCGCAAACAATGCACGCGAGA 625
consensus_7005#3      TGACTCTGATACGTCAGCCAGCACC----------------------------------- 679
consensus_7005#4      ------------------------------------------------------------
                                                                                  

consensus_7005#1      ------------------------------------------------------------
consensus_7005#2      ------------------------------------------------------------
consensus_7005#0      AACACGCAAAATAAGAAGCGAGCCTTATGAAACACATTTCTTCTTTTCGTTTACCGCACA 685
consensus_7005#3      ------------------------------------------------------------
consensus_7005#4      ------------------------------------------------------------
                                                                                  

consensus_7005#1      ------------------------------------------------------------
consensus_7005#2      ------------------------------------------------------------
consensus_7005#0      CCATTGCGTCGTTGAGGTTGCGTTTGTAAAATATAAAGTGCATGTTTCTTTTTTTTACAC 745
consensus_7005#3      ------------------------------------------------------------
consensus_7005#4      ------------------------------------------------------------
                                                                                  

consensus_7005#1      ------------------------------------------------------------
consensus_7005#2      ------------------------------------------------------------
consensus_7005#0      AGATGCGTACTATTATAAGCTAGCAGAGTATCAAAGAACTTCAAGTCAAAGTATAATAAA 805
consensus_7005#3      ------------------------------------------------------------
consensus_7005#4      ------------------------------------------------------------
                                                                                  

consensus_7005#1      ----------------------------------------------------
consensus_7005#2      ----------------------------------------------------
consensus_7005#0      AAAAATCGAGAAAAAAAAAAAAAAAAAAAAAAGGCCACATGGTGCCCGGGGG 857
consensus_7005#3      ----------------------------------------------------
consensus_7005#4      ----------------------------------------------------
                                                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)