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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7024#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1341 fasta sequence
[CCGCACATCTGGTGAACGTGCTGGCCGCATCCGGTGGCAGTGAGCGGGCCGATGGAGTAGTGGTAGGACAGACCAATGGCTCGACAGTCGGTGAAGGTTCCGGAAGTGGCGGTGGTGGTGGTGGTGGTGGTGGTGTTGCCGTGAAGCGAAAGCTACGCGAGCACATCGACTGGCTGACCAAGATCCGGAAGCAGAAGCAGCTCCAGGCGGCAAAAGGCATCGAGAACAGCTACGGCACGGCAATGGAGCGGGTGACGGCATCGCAGCTGCTCTCGCCACGGCTTCAGCAGTTGAAATCGTGTGGTGATGAGGGTGGTGGAGGAGGTGGCGGTGGAGGAGGGACGGTTTC---TGGTAGTGGTGGGCTTGGTGAGAACAAACACCAGCAGCAGGAAACGAATCACCTTTCAGGAAACGCGACTTCGAGCAGCAGCTCAGAAACACCGACCACGCCACGGCGACGATCATCCTGGGCGTGGAATTCGAGCAGCAGTCCACACGGTGAGCACGGTGACGACACAGGGCAGCTGCGCGGTACACGCACAACGCCCCGAAGCCGACGGTACTCGACGAATGGTATGCGGGGTGTACTACCGGTCACCTCGGAGACGGCTTCCATAAGGCGCTTTCTTACGGTGACGACACCCACCAGCCGGACCAACGCGCAAGCATCCAACTGACTCCAGACTACAACACACAGAGAAAGTGTTACCTCCAATACCTCTTGATTATCAGATTTTTATAGCTGTTTAAGGATTAGTTTGTAAGCGAAAGTTCTTCCCCCGTAACGATCGGCGTTAGAGGGACGAGACATTGCAACATGTACATAGAATTTGAGAATACTATTCGCTTTCGAAATGCGAAGAAAACTAACACGTCCCCCCCCAAGTACACGGATCTAATCTTAATCTTTTCTTTTTTTTTAAATTTCACGAAACAATCATTCGAATGATCTGTATACGCGCCATAAATATTTAATCACGCTTTTACTTTTAAACACTCACACACACACACGCGCTATTGCTTGCGACTAATCTAAACTAACTTCCTTTACGTGCATTTANGTAGCGAACAAAGAGAACTCTTTTATTTCTGTTTATTGAACGTTTTTTTAAAAGAAATTAATCATCAAAAGGATAAATTGTTTGGCAAATGGGAAGGTGGAATGAATGTATGTAAATAGCACAGAAGAGACGAAAATAGAGAGAGTGATGAATTGTGATGAAGTAGTGAAGTGTGCCTGTTTGGACCATAATGGAATTGTTTGTTCGGGTAAATACGTAGTCGACGGACAGTACAGCCAGGATGGGACAATAAAAATCACAAAATGCATTTGACAAAAAA]
[+] EMBL BM599922 [CCGCACATCTGGTGAACGTGCTGGCCGCATCCGGTGGCAGTGAGCGGGCCGATGGAGTAGTGGTAGGACAGACCAATGGCTCGACAGTCGGTGAAGGTTCCGGAAGTGGCGGTGGTGGTGGTGGTGGTGGTGGTGTTGCCGTGAAGCGAAAGCTACGCGAGCACATCGACTGGCTGACCAAGATCCGGAAGCAGAAGCAGCTCCAGGCGGCAAAAGGCATCGAGAACAGCTACGGCACGGCAATGGAGCGGGTGACGGCATCGCAGCTGCTCTCGCCACGGCTTCAGCAGTTGAAATCGTGTGGTGATGAGGGTGGTGGAGGAGGTGGCGGTGGAGGAGGGACGGTTTCCAGTGGTAGTGGTGGGCTTGGTGAGAACAAACACCAGCAGCAGGAAACGAATCACCTTCCAGGAAACGCGGCTTCGAGCAGCAGCTCAGAAACACCGACCACGCCACGGCGACGATCATCCTGGGCGTGGAATTCGAGCAGCAGTCCACACGGTGAGCACGGTGACGACACAGGGCAGCTGCGCGGTACACGCACAACGCCCCGAAGCCGACGGTACTCGACGAATGGTATGCGGGGTGTACTACCGGTCACCTCGGAGACGGCTTCCATCAGGCGCTTTCTTACGGTGACGACACCCACCAGCCGGACCAACGCGCAAGCATCCAACTGACTCCAGACTACAACACACA ]
[+] EMBL BX628570 [ gtGGAGGAGGTGGTGGAGGGACAGTGGC TAGTAGTGTAGGGCCGAGTGAGAACAAACACCAGCAGCAGGAAACGAATCACCTTTCAGGAAACGCGACTTCGAGCAGCAGCTCAGAAACACCGACCACGCCACGGCGACGATCATCCTGGGCGTGGAATTCGAGCAGCAGTCCACACGGTGAGCACGGTGACGACACAGGGCAGCTGCGCGGTACACGCACAACGCCCCGAAGCCGACGGTACTCGACGAATGGTATGCGGGGTGTACTACCGGTCACCTCGGAGACGGCTTCCATAAGGCGCTTTCTTACGGTGACGACACCCACCAGCCGGACCAACGCGCAAGCATCCAACTGACTCCAGACTACAACACACAGAGAAAGTGTTACCTCCAATACCTCTTGATTATCAGATTTTTATAGCTGTTTAAGGATTAGTTTGTAAGCGAAAGTTCTTCCCCCGTAACGATCGGCGTTAGAGGGACGAGACATTGCAACATGTACATAGAATTTGAGAATACTATTCGCTTTCGAAATGCGAAGAAAACTAACACGTCCCCCCCCAAGTACACGGATCTAATC ]
[+] EMBL AGA281285 [ GTGAGAACAAACACCAGCAGCAGGAAACGAATCACCTTTCAGGAAACGCGACTTCGAGCAGCAGCTCAGAAACACCGACCACGCCACGGCGACGATCATCCTGGGCGTGGAATTCGAGCAGCAGTCCACACGGTGAGCACGGTGACGACACAGGGCAGCTGCGCGGTACACGCACAACGCCCCGAAGCCGACGGTACTCGACGAATGGTATGCGGGGTGTACTACCGGTCACCTCGGAGACGGCTTCCATAAGGCGCTTTCTTACGGTGACGACACCCACCAGCCGGACCAACGCGCAAGCATCCAACTGACTCCAGACTACAACACACAGAGAAAGTGTTACCTCCAATACCTCTTGATTATCAGATTTTTATAGCTGTTTAAGG ]
[+] EMBL BX621104 [ ACCAGCAGCAGGAAACGAATCACCTTTCAGGAAACGCGACTTCGAGCAGCAGCTCAGAAACACCGACCACGCCACGGCGACGATCATCCTGGGCGTGGAATTCGAGCAGCAGTCCACACGGTGAGCACGGTGACGACACAGGGCAGCTGCGCGGTACACGCACAACGCCCCGAAGCCGACGGTACTCGACGAATGGTATGCGGGGTGTACTACCGGTCACCTCGGAGACGGCTTCCATAAGGCGCTTTCTTACGGTGACGACACCCACCAGCCGGACCAACGCGCAAGCATCCAACTGACTCCAGACTACAACACACAGAGAAAGTGTTACCTCCAATACCTCTTGATTATCAGATTTTTATAGCTGTTTAAGGATTAGTTTGTAAGCGAAAGTTCTTCCCCCGTAACGATCGGCGTTAGAGGGACGAGACATTGCAACATGTACATAGAATTTGAGAATACTATTCGCTTTCGAAATGCGAAGAAAACTAACACGTCCCCCCCCAAGTACACGGATCTAATCTTAATCTTTTCTTTTTTTTTAAATTTCACGAAACAATCATTCGAATGATCTGTATACGCGCCATAAATATTTAATCACGCTTTTACTTTTAAACACTCACACACACACACGCGCTATTGCTTGCGACTAATCTAAACTAACTTCCTTTACGTGCATTTANGTAGCGAACAAAGAGAACTCTTTTATTTCTGTTTATTGAACGTTTTTTTAAAAGAAATT ]
[-] EMBL AGA284480 [ AAACAATCATTCGAATGATCTGTATACGCGCCATAAATATTTAATCACGCTTTTATTTTTAAACAGTCACACACACACACGCGCTATTGCTTGCGACTAATCTAAACTAACTTCCTTTACGTGCATTTA TTAGCGAACAAAGAGAACTCTTTTATTGCTGTTTATTGAACGTTTTTTAAAAAGAAATTAATCATCAAAAGGATAAATTGTTTGGCAAATGGGAAGGTGGAATGAATGTATGTAAATAGCACAGAAGAGACGAAAATAGAGAGAGTGATGAATTGTGATGAAGTAGTGAAGTGTGCCTGTTTGGACCATAATGGAATTGTTTGTTCGGGTAAATACGTAGTCGACGGACAGTACAGCCAGGATGGGACAATAAAAATCACAAAATGCATTTGACAAAAAA]
consensusID : consensus_7024#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 738 fasta sequence
[ACGCGAGCACATCGACTGGCTGACCAAGATCCGGAAGCAGAAGCAGCTCCAGGCGGCAAAGGGCATCGAGAACAGCTACGGCACGGCAATGGAGCGGGTGACGGCATCGCAGCTGCTCTCGCCACGGCTTCAGCAGTTGAAATCGTGTGGTGATGAGGGTGGTGGAGGAGGTGGCGGTGGAGGAGGGACGGTTTCCAGTGGTAGTGGTGGGCTTGGTGAGAACAAACACCAGCAGCAGGAAACGAATCACCTTCCAGGAAACGCGGCTTCGAGCAGCAGCTCAGAAACACCGACCACGCCACGGCGACGATCATCCTGGGCGTGGAATTCGAGCAGCAGTCCACATGGTGAGCATGGTGACGACACAGGGCAGCTGCGCGGTACACGCACAACGCCCCGAAGCCGACGGTACTCGACGAATGGTATGCGGGGTGTGCTACCGGTCACCTCGGAGACGGCTTCCATAAGGCGCTTTCTTACGGTGACGACACCCACCAGCCGGACCAACGCGCAAGCATCCAATTGACTTTGCGCAATGGGTATTGAGTGCCTAAAGAAGCAGCTTGCTTCACACGTTTCAGACTACAACACACAGAGAAAGTGTAACCTCCAATACCTCTTGATTATCAGATTTTTATAGCTGTTTAAGGATTAGTTTGTAAGCGAAAGTTTTTCCCCCGTAACGATCGGCGTTAGAGGGACGAGACATTGCAACATGTACATAGAATTTGAGAATAC]
[+] EMBL BX628414 [ACGCGAGCACATCGACTGGCTGACCAAGATCCGGAAGCAGAAGCAGCTCCAGGCGGCAAAGGGCATCGAGAACAGCTACGGCACGGCAATGGAGCGGGTGACGGCATCGCAGCTGCTCTCGCCACGGCTTCAGCAGTTGAAATCGTGTGGTGATGAGGGTGGTGGAGGAGGTGGCGGTGGAGGAGGGACGGTTTCCAGTGGTAGTGGTGGGCTTGGTGAGAACAAACACCAGCAGCAGGAAACGAATCACCTTCCAGGAAACGCGGCTTCGAGCAGCAGCTCAGAAACACCGACCACGCCACGGCGACGATCATCCTGGGCGTGGAATTCGAGCAGCAGTCCACATGGTGAGCATGGTGACGACACAGGGCAGCTGCGCGGTACACGCACAACGCCCCGAAGCCGACGGTACTCGACGAATGGTATGCGGGGTGTGCTACCGGTCACCTCGGAGACGGCTTCCATAAGGCGCTTTCTTACGGTGACGACACCCACCAGCCGGACCAACGCGCAAGCATCCAATTGACTTTGCGCAATGGGTATTGAGTGCCTAAAGAAGCAGCTTGCTTCACACGTTTCAGACTACAACACACAGAGAAAGTGTAACCTCCAATACCTCTTGATTATCAGATTTTTATAGCTGTTTAAGGATTAGTTTGTAAGCGAAAGTTTTTCCCCCGTAACGATCGGCGTTAGAGGGACGAGACATTGCAACATGTACATAGAATTTGAGAATAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7024#0 CCGCACATCTGGTGAACGTGCTGGCCGCATCCGGTGGCAGTGAGCGGGCCGATGGAGTAG 60
consensus_7024#1 ------------------------------------------------------------
consensus_7024#0 TGGTAGGACAGACCAATGGCTCGACAGTCGGTGAAGGTTCCGGAAGTGGCGGTGGTGGTG 120
consensus_7024#1 ------------------------------------------------------------
consensus_7024#0 GTGGTGGTGGTGGTGTTGCCGTGAAGCGAAAGCTACGCGAGCACATCGACTGGCTGACCA 180
consensus_7024#1 ----------------------------------ACGCGAGCACATCGACTGGCTGACCA 26
**************************
consensus_7024#0 AGATCCGGAAGCAGAAGCAGCTCCAGGCGGCAAAAGGCATCGAGAACAGCTACGGCACGG 240
consensus_7024#1 AGATCCGGAAGCAGAAGCAGCTCCAGGCGGCAAAGGGCATCGAGAACAGCTACGGCACGG 86
********************************** *************************
consensus_7024#0 CAATGGAGCGGGTGACGGCATCGCAGCTGCTCTCGCCACGGCTTCAGCAGTTGAAATCGT 300
consensus_7024#1 CAATGGAGCGGGTGACGGCATCGCAGCTGCTCTCGCCACGGCTTCAGCAGTTGAAATCGT 146
************************************************************
consensus_7024#0 GTGGTGATGAGGGTGGTGGAGGAGGTGGCGGTGGAGGAGGGACGGTTTC---TGGTAGTG 357
consensus_7024#1 GTGGTGATGAGGGTGGTGGAGGAGGTGGCGGTGGAGGAGGGACGGTTTCCAGTGGTAGTG 206
************************************************* ********
consensus_7024#0 GTGGGCTTGGTGAGAACAAACACCAGCAGCAGGAAACGAATCACCTTTCAGGAAACGCGA 417
consensus_7024#1 GTGGGCTTGGTGAGAACAAACACCAGCAGCAGGAAACGAATCACCTTCCAGGAAACGCGG 266
*********************************************** ***********
consensus_7024#0 CTTCGAGCAGCAGCTCAGAAACACCGACCACGCCACGGCGACGATCATCCTGGGCGTGGA 477
consensus_7024#1 CTTCGAGCAGCAGCTCAGAAACACCGACCACGCCACGGCGACGATCATCCTGGGCGTGGA 326
************************************************************
consensus_7024#0 ATTCGAGCAGCAGTCCACACGGTGAGCACGGTGACGACACAGGGCAGCTGCGCGGTACAC 537
consensus_7024#1 ATTCGAGCAGCAGTCCACATGGTGAGCATGGTGACGACACAGGGCAGCTGCGCGGTACAC 386
******************* ******** *******************************
consensus_7024#0 GCACAACGCCCCGAAGCCGACGGTACTCGACGAATGGTATGCGGGGTGTACTACCGGTCA 597
consensus_7024#1 GCACAACGCCCCGAAGCCGACGGTACTCGACGAATGGTATGCGGGGTGTGCTACCGGTCA 446
************************************************* **********
consensus_7024#0 CCTCGGAGACGGCTTCCATAAGGCGCTTTCTTACGGTGACGACACCCACCAGCCGGACCA 657
consensus_7024#1 CCTCGGAGACGGCTTCCATAAGGCGCTTTCTTACGGTGACGACACCCACCAGCCGGACCA 506
************************************************************
consensus_7024#0 ACGCGCAAGCATCCAACTGACTC------------------------------------- 680
consensus_7024#1 ACGCGCAAGCATCCAATTGACTTTGCGCAATGGGTATTGAGTGCCTAAAGAAGCAGCTTG 566
**************** *****
consensus_7024#0 ------------CAGACTACAACACACAGAGAAAGTGTTACCTCCAATACCTCTTGATTA 728
consensus_7024#1 CTTCACACGTTTCAGACTACAACACACAGAGAAAGTGTAACCTCCAATACCTCTTGATTA 626
************************** *********************
consensus_7024#0 TCAGATTTTTATAGCTGTTTAAGGATTAGTTTGTAAGCGAAAGTTCTTCCCCCGTAACGA 788
consensus_7024#1 TCAGATTTTTATAGCTGTTTAAGGATTAGTTTGTAAGCGAAAGTTTTTCCCCCGTAACGA 686
********************************************* **************
consensus_7024#0 TCGGCGTTAGAGGGACGAGACATTGCAACATGTACATAGAATTTGAGAATACTATTCGCT 848
consensus_7024#1 TCGGCGTTAGAGGGACGAGACATTGCAACATGTACATAGAATTTGAGAATAC-------- 738
****************************************************
consensus_7024#0 TTCGAAATGCGAAGAAAACTAACACGTCCCCCCCCAAGTACACGGATCTAATCTTAATCT 908
consensus_7024#1 ------------------------------------------------------------
consensus_7024#0 TTTCTTTTTTTTTAAATTTCACGAAACAATCATTCGAATGATCTGTATACGCGCCATAAA 968
consensus_7024#1 ------------------------------------------------------------
consensus_7024#0 TATTTAATCACGCTTTTACTTTTAAACACTCACACACACACACGCGCTATTGCTTGCGAC 1028
consensus_7024#1 ------------------------------------------------------------
consensus_7024#0 TAATCTAAACTAACTTCCTTTACGTGCATTTANGTAGCGAACAAAGAGAACTCTTTTATT 1088
consensus_7024#1 ------------------------------------------------------------
consensus_7024#0 TCTGTTTATTGAACGTTTTTTTAAAAGAAATTAATCATCAAAAGGATAAATTGTTTGGCA 1148
consensus_7024#1 ------------------------------------------------------------
consensus_7024#0 AATGGGAAGGTGGAATGAATGTATGTAAATAGCACAGAAGAGACGAAAATAGAGAGAGTG 1208
consensus_7024#1 ------------------------------------------------------------
consensus_7024#0 ATGAATTGTGATGAAGTAGTGAAGTGTGCCTGTTTGGACCATAATGGAATTGTTTGTTCG 1268
consensus_7024#1 ------------------------------------------------------------
consensus_7024#0 GGTAAATACGTAGTCGACGGACAGTACAGCCAGGATGGGACAATAAAAATCACAAAATGC 1328
consensus_7024#1 ------------------------------------------------------------
consensus_7024#0 ATTTGACAAAAAA 1341
consensus_7024#1 -------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||