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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7051#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1297 fasta sequence
[CCGGTTCCCGATTGCGCCGCAGAACCAATGCTACGACTATATCCTCTTCCGCGGGACGGACATCAAGGATATTCGGGTGATCAACAACAACCCGGTCCCGAACGATCCGGCCATCATGCAGATGCATCTGCCGCCGCAGCAGCCGCCCCAGATGCCGATGCCGAACAAGCTCGGCCAGCCGAGCTACCAGTCGCCCCAGGGCTTCATGATGCCGCAGATGGGTGGCCCACCGACCGGTGGCCCGCCCGGCGGTCCGATGGGTGGCGGTCCCCCTGTGACCGGCGGTCCGATGGGTGGTCCACCACCGCCCGGCCATGCACCGCAGATGGGTGGTGGCGGCGGCGGCGGCGGCGGCCAACCGTACAACGCTTTCGGTGGAATGAACAATCTCGGAGGAAGTGGATCGCGTTCGGGAACTCCGAGCAACATGTTGTCGCGTAAGAGTCCGACGGTGGACATTGCTGTGCAGACGAACCAGCAGCAGCAACAGCAACAGCAGCAA---------CAGCAGCAGCAGCAGCAACATGGACAGCCGCAACAGCAGCAGATGATGCAGCAGCAGAACAACCGCGACGGTGGCAATAACATGCAGCGCAACAAGAACAACCAGCAGCACCGGGGAAATCATCAGAACAACAATATGCGAGAGCGACGCGATTCCGGCA---------AACAGCAGCAACAGCATGGTGGCGACAATCAGATGAAGGAAAATTACAAGCCAAGACAGCAGCACCAGCAACACCAGGGACAACAGCAGGGGC-AAC-AACAGGGTGGTGGTC-AAAACCGTGGCGGCTGGAACAACAATCGTAACCACCAAAACCAAAACAATGGTGGTAACGCCATCATGCGCCGTCCTCGAGGAAACATTGGCCAGCCGCAACAGCAGCAGCAGGGTGGAGCCGGCGGTGCCGGTGGAGGCCAACGTGCTAAGAATTTGCTTAAGTTCGAAAACGATTACGATTTCGAACAGGCCAATAGCAAGTTCGAAGAGCTTCGATCGCAGCTTTCTAAACTTAAGGTGGGCGAAGAGTTGAAACCAGAGCAGGTGGTGCAGATCACAACCGAAACGTTGGACAAGAAGGACGATTCAGGCAACGAAACTGGTGCCGGTGAGCACGAACAGGA-GGAGGAAGATGTCATTTGCTACGACAAAGCAAAGTCCTTCTTCGACAACATTTCGTGCGAGGCGGTCGAGCGCGCGAAGGGAAAGCAGCAGCGTACGGATTGGCGCCAGGAGCGCAAACTGAACACGGAAACATTCCGGCGTCGGGTCGACCAGACGCGGCGGATACCACCCGACGAG]
[+] EMBL BM639465 [CCGGTTCCCGATTGCGCCGCAGAACCAATGCTACGACTATATCCTCTTCCGCGGGACGGACATCAAGGATATTCGGGTGATCAACAACAACCCGGTCCCGAACGATCCGGCCATCATGCAGATGCATCTGCCGCCGCAGCAGCCGCCCCAGATGCCGATGCCGAACAAGCTCGGCCAGCCGAGCTACCAGTCGCCCCAGGGCTTCATGATGCCGCAGATGGGTGGCCCACCGACCGGTGGCCCGCCCGGCGGTCCGATGGGTGGCGGTCCCCCTGTGACCGGCGGTCCGATGGGTGGTCCACCACCGCCCGGCCATGCACCGCAGATGGGTGGTGGCGGCGGCGGCGGCGGCGGCCAACCGTACAACGCTTTCGGTGGAATGAACAATCTCGGAGGAAGTGGATCGCGTTCGGGAACTCCGAGCAACATGTTGTCGCGTAAGAGTCCGACGGTGGACATTGCTGTGCAGACGAACCAGCAGCAGCAACAGCAACAGCAGCAA CAGCAGCAGCAGCAGCAACATGGACAGCCGCAACAGCAGCAGATGATGCAGCAGCAGAACAACCGCGACGGTGGCAATAACATGCAGCGCAACAAGAACAACCAGCAGCACCGGGGAAATCATCAGAACAACAATATGCGAGAGCGACGCGAT ]
[+] EMBL BM590624 [ ccggtttATGCATCTGCCGCCGCAGTATTCGCCCCACATGCCGATGCCGAACTGGCTCGGCCAGCCGAGCTACCAGTCGCCCCAGGGCTTCATGATGCCGCAGATGGGTGGCCCACCGACCGGTGGCCCGCCCGGCGGTCCGATGGGTGGCGGTCCCCCTGTGACCGGCGGTCCGATGGGTGGTCCACCACCGCCCGGCCATGCACCGCATATGGGTGGTGGCGGCGGCGGCGGCGGCGGCCAACCGTACAACGCTTTCGGTGGAATGAACAATCTCGGAGGAAGTGGATCGCGTTCGGGAACTCCGAGCAACATGTTGTCGCGTAAGAGTCCGACGGTGGACATTGCTGTGCAGACGAACCAGCAGCAGCAACAGCAACAGCAGCAA CAGCAGCAGCAGCAGCAACATGGACAGCCGCAACAGCAGCAGATGATGCAGCAGCAGAACAACCGCGACGGTGGCAATAACATGCAGCGCAACAAGAACAACCAGCAGCACCGGGGAAATCATCAGAACAACAATATGCGAGAGCGACGCGATTCCGGCA AACAGCAGCAACAGCATGGTGGCGACAATCAGATGAAGGAAAATTATAAGCCAAGACAGCAGCACCAGCAACACCAGGGACAACAGCAGGGGCAAACAAACAGGGTGGTGGCCAAAAACCGTGGCGGCTGG ]
[+] EMBL BM587510 [ ccgGACGAACCAGCAGCAGCAACAGCAACAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAACATGGACAGCCGCAACAGCAGCAGATGATGCAGCAGCAAAACAACCGCGACGGTGGCAATAACATGCAGCGCAACAAGAACAACCAGCAGCACCGGGGAAATCATCAGAACAACAATATGCGAGAGCGACGCGATTCCGGCAAACAGCAGCAACAGCAGCAACAGCATGGTGGCGACAATCAGATGAAGGAAAATTACAAGCCAAGACAGCAGCACCAGCAACACCAGGGACAACAGCAGGGGC AAC AACAGGGTGGTGGTC AAAACCGTGGCGGCTGGAACAACAATCGTAACCACCAAAACCAAAACAATGGTGGTAACGCCATCATGCGCCGTCCTCGAGGAAACATTGGCCAGCCGCAACAGCAGCAGCAGGGTGGAGCCGGCGGTGCCGGTGGAGGCCAACGTGCTAAGAATTTGCTTAAGTTCGAAAACGATTACGATTTCGAACAGGCCAATAGCAAGTTCGAAGAGCTTCGATCGCAGCTTTCTAAACTTAAGGTGGGCGAAGAGTTGAAACCAGAGCAGGTGGTGCAGATCACAACCGAAACGTTGGACAAGAAGGACGAT ]
[+] EMBL BM586832 [ ccgCGCGATTCCGGCAAACAGCAGCAACAGCAGCAACAGCATGGTGGCGACAATCAGATGAAGGAAAATTACAAGCCAAGACAGCAGCACCAGCAACACCAGGGACAACAGCAGGGGC AAC AACAGGGTGGTGGTC AAAACCGTGGCGGCTGGAACAACAATCGTAACCACCAAAACCAAAACAATGGTGGTAACGCCATCATGCGCCGTCCTCGAGGAAACATTGGCCAGCCGCAACAGCAGCAGCAGGGTGGAGCCGGCGGTGCCGGTGGAGGCCAACGTGCTAAGAATTTGCTTAAGTTCGAAAACGATTACGATTTCGAACAGGCCAATAGCAAGTTCGAAGAGCTTCGATCGCAGCTTTCTAAACTTAAGGTGGGCGAAGAGTTGAAACCAGA GCAGATCACAACCGAAACGTTGGACAAGAAGGACGATTCAGGCAACGAAACTGGTGCCGGTGAGCACGAACAGGAGGGAGGAAGATGTCATTTGCTACGACAAAGCAAAGTCCTTCTTCGACAACATTTCGTGCGAGGCGGTCGAGCGCGCGAAGGGAAAGCAGCAGCGTACGGATTGGCGCCAGGAGCGCAAACTGAACACGGAAACATTCCGGCGTCGGGTCGACCAGACGCGGCGGATACCACCCGACGAG]
[+] EMBL BM623181 [ ccGGGGC AAC AACAGGGTGGTGGTC AAAACCGTGGCGGCTGGAACAACAATCGTAACCACCAAAACCAAAACAATGGTGGTAACGCCATCATGCGCCGTCCTCGAGGAAACATTGGCCAGCCGCAACAGCAGCAGCAGGGTGGAACCGGCGGTGCCGGTGGAGGCCAACGTGCTAAGAATTTGCTTAAGTTCGAAAACGATTACGATTTCGAACAGGCCAATAGCAAGTTCGAAGAGCTTCGATCGCAGCTTTCTAAACTTAAGGTGGGCGAAGAGTTGAAACCAGAGCAGGTGGTGCAGATTACAACCGAAACGTTGGACAAGAAGGACGATTCAGGCAACGAAACTGGTGCCGGTGAGCACGAACAGGA GGAGGAAGATGTCATTTGCTACGACAAAGCAAAGTCCTTCTTCGACAACATTTCGTGCGAGGCGGTCGAGCGCGCGAAGGGAAAGCAGCAGCGTACGGATTGGCGCCAGGAGCGCAAACTGAA ]
consensusID : consensus_7051#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 608 fasta sequence
[GACCCACGCGTCCGCACCGGGGAAATCATCAGAACAACAATATGCGAGAGCGACGCGATTCCGGCAAACAGCAGCAACAGCAGCAACAGCATGGTGGCGACAATCAGATGAAGGAAAATTACAAGCCAAGACAGCAGCACCAGCAACACCAGGGACAACAGCAGGGGCAACAACAGGGTGGTGGTCAAAACCGTGGCGGCTGGAACAACAATCGTAACCACCAAAACCAAAACAATGGTGGTAACGCCATCATGCGCCGTCCTCGAGGAAACATTGGCCAGCCGCAACAGCAGCAGCAGGGTGGAGCCGGCGGTGCCGGTGGAGGCCAACGTGCTAAGAATTTGCTTAAGTTCGAAAACGATTACGATTTCGAACAGGCCAATAGCAAGTTCGAAGAGCTTCGATCGCAGCTTTCTAAACTTAAGGTGGGCGAAGAGTTGAAACCAGAGCAGGTGGTGCAGATCACAACCGAAACGTTGGACAAGAAGGACGATTCAGGCAACGAAACTGGTGCCGGTGAGCACGAACAGGAGGAGGAAGATGTCATTTGCTACGACAAAGCAAAGTCCTTCTTCGACAACATTTCGTGCGAGGCGGTCGAGCGCGCG]
[+] EMBL BM652769 [GACCCACGCGTCCGCACCGGGGAAATCATCAGAACAACAATATGCGAGAGCGACGCGATTCCGGCAAACAGCAGCAACAGCAGCAACAGCATGGTGGCGACAATCAGATGAAGGAAAATTACAAGCCAAGACAGCAGCACCAGCAACACCAGGGACAACAGCAGGGGCAACAACAGGGTGGTGGTCAAAACCGTGGCGGCTGGAACAACAATCGTAACCACCAAAACCAAAACAATGGTGGTAACGCCATCATGCGCCGTCCTCGAGGAAACATTGGCCAGCCGCAACAGCAGCAGCAGGGTGGAGCCGGCGGTGCCGGTGGAGGCCAACGTGCTAAGAATTTGCTTAAGTTCGAAAACGATTACGATTTCGAACAGGCCAATAGCAAGTTCGAAGAGCTTCGATCGCAGCTTTCTAAACTTAAGGTGGGCGAAGAGTTGAAACCAGAGCAGGTGGTGCAGATCACAACCGAAACGTTGGACAAGAAGGACGATTCAGGCAACGAAACTGGTGCCGGTGAGCACGAACAGGAGGAGGAAGATGTCATTTGCTACGACAAAGCAAAGTCCTTCTTCGACAACATTTCGTGCGAGGCGGTCGAGCGCGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7051#0 CCGGTTCCCGATTGCGCCGCAGAACCAATGCTACGACTATATCCTCTTCCGCGGGACGGA 60
consensus_7051#1 ------------------------------------------------------------
consensus_7051#0 CATCAAGGATATTCGGGTGATCAACAACAACCCGGTCCCGAACGATCCGGCCATCATGCA 120
consensus_7051#1 ------------------------------------------------------------
consensus_7051#0 GATGCATCTGCCGCCGCAGCAGCCGCCCCAGATGCCGATGCCGAACAAGCTCGGCCAGCC 180
consensus_7051#1 ------------------------------------------------------------
consensus_7051#0 GAGCTACCAGTCGCCCCAGGGCTTCATGATGCCGCAGATGGGTGGCCCACCGACCGGTGG 240
consensus_7051#1 ------------------------------------------------------------
consensus_7051#0 CCCGCCCGGCGGTCCGATGGGTGGCGGTCCCCCTGTGACCGGCGGTCCGATGGGTGGTCC 300
consensus_7051#1 ------------------------------------------------------------
consensus_7051#0 ACCACCGCCCGGCCATGCACCGCAGATGGGTGGTGGCGGCGGCGGCGGCGGCGGCCAACC 360
consensus_7051#1 ------------------------------------------------------------
consensus_7051#0 GTACAACGCTTTCGGTGGAATGAACAATCTCGGAGGAAGTGGATCGCGTTCGGGAACTCC 420
consensus_7051#1 ------------------------------------------------------------
consensus_7051#0 GAGCAACATGTTGTCGCGTAAGAGTCCGACGGTGGACATTGCTGTGCAGACGAACCAGCA 480
consensus_7051#1 ------------------------------------------------------------
consensus_7051#0 GCAGCAACAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACATGGACAGCCGCAACAGCA 540
consensus_7051#1 ------------------------------------------------------------
consensus_7051#0 GCAGATGATGCAGCAGCAGAACAACCGCGACGGTGGCAATAACATGCAGCGCAACAAGAA 600
consensus_7051#1 ---------------------------------------------------------GAC 3
**
consensus_7051#0 CAAC-CAGCAGCACCGGGGAAATCATCAGAACAACAATATGCGAGAGCGACGCGATTCCG 659
consensus_7051#1 CCACGCGTCCGCACCGGGGAAATCATCAGAACAACAATATGCGAGAGCGACGCGATTCCG 63
* ** * * **************************************************
consensus_7051#0 GCAAACAGCAGCAACAGCA---------TGGTGGCGACAATCAGATGAAGGAAAATTACA 710
consensus_7051#1 GCAAACAGCAGCAACAGCAGCAACAGCATGGTGGCGACAATCAGATGAAGGAAAATTACA 123
******************* ********************************
consensus_7051#0 AGCCAAGACAGCAGCACCAGCAACACCAGGGACAACAGCAGGGGCAACAACAGGGTGGTG 770
consensus_7051#1 AGCCAAGACAGCAGCACCAGCAACACCAGGGACAACAGCAGGGGCAACAACAGGGTGGTG 183
************************************************************
consensus_7051#0 GTCAAAACCGTGGCGGCTGGAACAACAATCGTAACCACCAAAACCAAAACAATGGTGGTA 830
consensus_7051#1 GTCAAAACCGTGGCGGCTGGAACAACAATCGTAACCACCAAAACCAAAACAATGGTGGTA 243
************************************************************
consensus_7051#0 ACGCCATCATGCGCCGTCCTCGAGGAAACATTGGCCAGCCGCAACAGCAGCAGCAGGGTG 890
consensus_7051#1 ACGCCATCATGCGCCGTCCTCGAGGAAACATTGGCCAGCCGCAACAGCAGCAGCAGGGTG 303
************************************************************
consensus_7051#0 GAGCCGGCGGTGCCGGTGGAGGCCAACGTGCTAAGAATTTGCTTAAGTTCGAAAACGATT 950
consensus_7051#1 GAGCCGGCGGTGCCGGTGGAGGCCAACGTGCTAAGAATTTGCTTAAGTTCGAAAACGATT 363
************************************************************
consensus_7051#0 ACGATTTCGAACAGGCCAATAGCAAGTTCGAAGAGCTTCGATCGCAGCTTTCTAAACTTA 1010
consensus_7051#1 ACGATTTCGAACAGGCCAATAGCAAGTTCGAAGAGCTTCGATCGCAGCTTTCTAAACTTA 423
************************************************************
consensus_7051#0 AGGTGGGCGAAGAGTTGAAACCAGAGCAGGTGGTGCAGATCACAACCGAAACGTTGGACA 1070
consensus_7051#1 AGGTGGGCGAAGAGTTGAAACCAGAGCAGGTGGTGCAGATCACAACCGAAACGTTGGACA 483
************************************************************
consensus_7051#0 AGAAGGACGATTCAGGCAACGAAACTGGTGCCGGTGAGCACGAACAGGAGGAGGAAGATG 1130
consensus_7051#1 AGAAGGACGATTCAGGCAACGAAACTGGTGCCGGTGAGCACGAACAGGAGGAGGAAGATG 543
************************************************************
consensus_7051#0 TCATTTGCTACGACAAAGCAAAGTCCTTCTTCGACAACATTTCGTGCGAGGCGGTCGAGC 1190
consensus_7051#1 TCATTTGCTACGACAAAGCAAAGTCCTTCTTCGACAACATTTCGTGCGAGGCGGTCGAGC 603
************************************************************
consensus_7051#0 GCGCGAAGGGAAAGCAGCAGCGTACGGATTGGCGCCAGGAGCGCAAACTGAACACGGAAA 1250
consensus_7051#1 GCGCG------------------------------------------------------- 608
*****
consensus_7051#0 CATTCCGGCGTCGGGTCGACCAGACGCGGCGGATACCACCCGACGAG 1297
consensus_7051#1 -----------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||