cluster # 7053

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Anopheles gambiae
cluster # 7053 cluster # 7053 Sequences # 6 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7053#0 length = 865 sequences # 5

consensus_7053#1 length = 335 sequences # 1

consensusID : consensus_7053#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 865
fasta sequence

                              [CCGCGGACGCGTGGGCGGACGCGTGGGCGCAAGCACAAGAACGGGAAAGTTTGCGGTCGGATTTACGGCGTTCGCCTTTTTGTTTATTCTGATCGCTTTCTGCTCTCCCTACTGGCTACAAACCGATGGCGAACTGGAGCATCCAAAGTTTACCAATTTAGGACTTTGGGAGCTGTGCTTGCGCAACTTCCAGGACATTCACCGATGGTACGACTATCCGTTCAATGGCTGCATGTGGATATTCGAGGAGGAGTACTACATCATCCACGACTACATACTGCCCGGGTTCTTCATCGCCGTGCAG-TTCTTTTTCACGCTCTGCTTCACGCTGCTACTGATGGGCGTGATCATGACGCTGATGTTCTTGAGCTGCTCCCGGGACAACGATCGCTACATTATGCTGCTGCTGACGAACGGGACGGTGCTGCTGCTCGCTGCCCTGTGCGGGCTGATAGCGGTGGCCACGTTCGGCTGCTATGGCGATAGCCGCGACTGGATGCCGAACTGGGAGCACAACGATATGGGCTGGTCGTTCGCGCTGGGCGTCGTCGGCACGTTCGCCCTGTTCCCGGCAGGCGTCCTGTTCATCGTCGAAGCGCGCCGGGCCACGTACCGGAGGCTGAATAGCATTGCCAACACGGAGATGGCCGCTGCGTACACGATGGACGAGCGGGAAGTATCGCGGTGGACATACCGATATTTTAGGGCGTTCGCAACCAGGCCAAACATTCCACGTTCCACGACCGGTCGGAGAGAGTCCTCTGTTCAAGAAGATGCTCTTTCCCCCCCGTGAACGTATAACAATGCCTTGCTAGAATAGATTTAAGAACGTTTTTTTACATCCACAACAATTGACAGCCGTTTT]

[+] EMBL BM644399             [CCGCGGACGCGTGGGCGGACGCGTGGGCGCAAGCACAAGAACGGGAAAGTTTGCGGTCGGATTTACGGCGTTCGCCTTTTTGTTTATTCTGATCGCTTTCTGCTCTCCCTACTGGCTACAAACCGATGGCGAACTGGAGCATCCAAAGTTTACCAATTTAGGACTTTGGGAGCTGTGCTTGCGCAACTTCCAGGACATTCACCGATGGTACGACTATCCGTTCAATGGCTGCATGTGGATATTCGAGGAGGAGTACTACATCATCCACGACTACATACTGCCCGGGTTCTTCATCGCCGTGCAG TTCTTTTTCACGCTCTGCTTCACGCTGCTCCTGATGGGCGTGATCATGACGCTGATGTTTTTGAGCTGCTCACGGGACAACGATCGCTACATTATGCTGCTGCTGACGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM645942             [                      ccGGGCGCAAGCACAAGAACGGGAAAGTTTGCGGTCGGATTTACGGCGTTCGCCTTTTTGTTTATTCTGATCGCTTTCTGCTCTCCCTACTGGCTACAAACCGATGGCGAACTGGAGCATCCAAAGTTTACCAATTTAGGACTTTGGGAGCTGTGCTTGCGCAACTTCCAGGACATTCACCGATGGTACGACTATCCGTTCAATGGCTGCATGTGGATATTCGAGGAGGAGTACTACATCATCCACGACTACATACTGCCCGGGTTCTTCATCGCCGTGCAG TTCTTTTTCACGCTCTGCTTCACGCTGCTACTGATGGGCGTGATCATGACGCTGATGTTCTTGAGCTGCTCCCGGGACAACGATCGCTACATTATGCTGCTGCTGACGAACGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM631680             [                        ccGCGCAAGCACAAGAACGGGAAAGTTTGCGGTCGGATTTACGGCGTTCGCCTTTTTGTTTATTCTGATCGCTTTCTGCTCTCCCTACTGGCTACAAACCGATGGCGAACTGGAGCATCCAAAGTTTACCAATTTAGGACTTTGGGAGCTGTGCTTGCGCAACTTCCAGGACATTCACCGATGGTACGACTATCCGTTCAATGGCTGCATGTGGATATTCGAGGAGGAGTACTACATCATCCACGACTACATACTGCCCGGGTTCTTCATCGCCGTGCAG TTCTTTTTCACGCTCTGCTTCACGCTGCTACTGATGGGCGTGATCATGACGCTGATGTTCTTGAGCTGCTCCCGGGACAACGATCGCTACATTATGCTGCTGCTGACGAACGGGACGGTGCTGCTGCTCGCTGCCCTGTGCGGGCTGATAGCGGTGGCCACGTTCGGCTGCTATGGCGATAGCCGCGACTGGATGCCGAACTGGGAGCACAACGATATGGGCTGGTCGTTCGCGCTGGGCGTCGTCGGCACGTTCGCCCTGTTCCCGGCAGGCGTCCTGTTCATCGTCGAAGCGCGCCGGGCCACGTACCGGAGGCTGAATAGCATTGCCAACACGGAGA                                                                                                                                                                                                                             ]
[+] EMBL BM618420             [                                ccgCAAGAACGGGAAAGTTTGCGGTCGGATTTACGGCGTTCGCCTTTTTGTTTATTCTGATCGCTTTCTGCTCTCCCTACTGGCTACAAACCGATGGCGAACTGGAGCATCCAAAGTTTACCAATTTAGGACTTTGGGAGCTGTGCTTGCGCAACTTCCAGGACATTCACCGATGGTACGACTATCCGTTCAATGGCTGCATGTGGATATTCGAGGAGGAGTACTACATCATCCACGACTACATACTGCCCGGGTTCTTCATCGCCGTGCAGTTTCTTTTTCACGCTCTGCTTCACGCTGCTCCTGATGGGCGTGATCATGACGCTGATGTTTTTGAGCTGCTCACGGGACAACGATCGCTACATTATGCTGCTGCTGACGAACGGGACGGTGCTGCTGCTCGCTGCCCTGTGCGGTCTGATAGCGGTGGCCACGTTCGGCTGCTACGGCGATAGCCGCGACTGGATGCCGAACTGGGAGCACAACGATATGGGCTGGTCGTTCGCGCTGGGCGTCGTCGGCACTTTCGCCCTGTTCCCGGCAGGCGTCCTGTTCATTGTCGAAGCGCGCCGGGCCACGTACCGGAGGCTGAACAACATTGCCAACACGGAGATGGCCGCTGCGTACACGATGGACGAGCGGGAAGTATCGCGGTGGACATACCGATATTTTAGGGCGTTCGCAA                                                                                                                                                     ]
[+] EMBL BX618766             [                                                                                                                                                                                                      TCACCGATGGTACGACTATCCGTTCAATGGCTGCATGTGGATATTCGAGGAGGAGTACTACATCATCCACGACTACATACTGCCCGGGTTCTTCATCGCCGTGCAG TTCTTTTTCACGCTCTGCTTCACGCTGCTACTGATGGGCGTGATCATGACGCTGATGTTCTTGAGCTGCTCCCGGGACAACGATCGCTACATTATGCTGCTGCTGACGAACGGGACGTTGCTGCTGCTCGCTGCCCTGTGCGGGCTGATAGCGGTGGCCACGTTCGGCTGCTATGGCGATAGCCGCGACTGGATGCCGAACTGGGAGCACAACGATATGGGCTGGTCGTTCGCGCTGGGCGTCGTCGGCACGTTCGCCCTGTTCCCGGCAGGCGTCCTGTTCATCGTCGAAGCGCGCCGGGCCACGTACCGGAGGCTGAATAGCATTGCCAACACGGAGATGGCCGCTGCGTACACGATGGACGAGC GGAAGTATCGCGGTGGACATACCGATA TTTAGGGCGTTCGCAACCAGGCCAAACATTCCACGTTCCACGACCGGTCGGAGAGAGTCCTCTGTTCAAGAAGATGCTCTTTCCCCCCCGTGAACGTATAACAATGCCTTGCTAGAATAGATTTAAGAACGTTTTTTTACATCCACAACAATTGACAGCCGTTTT]




>consensus_7053#0
CCGCGGACGCGTGGGCGGACGCGTGGGCGCAAGCACAAGAACGGGAAAGTTTGCGGTCGG
ATTTACGGCGTTCGCCTTTTTGTTTATTCTGATCGCTTTCTGCTCTCCCTACTGGCTACA
AACCGATGGCGAACTGGAGCATCCAAAGTTTACCAATTTAGGACTTTGGGAGCTGTGCTT
GCGCAACTTCCAGGACATTCACCGATGGTACGACTATCCGTTCAATGGCTGCATGTGGAT
ATTCGAGGAGGAGTACTACATCATCCACGACTACATACTGCCCGGGTTCTTCATCGCCGT
GCAGTTCTTTTTCACGCTCTGCTTCACGCTGCTACTGATGGGCGTGATCATGACGCTGAT
GTTCTTGAGCTGCTCCCGGGACAACGATCGCTACATTATGCTGCTGCTGACGAACGGGAC
GGTGCTGCTGCTCGCTGCCCTGTGCGGGCTGATAGCGGTGGCCACGTTCGGCTGCTATGG
CGATAGCCGCGACTGGATGCCGAACTGGGAGCACAACGATATGGGCTGGTCGTTCGCGCT
GGGCGTCGTCGGCACGTTCGCCCTGTTCCCGGCAGGCGTCCTGTTCATCGTCGAAGCGCG
CCGGGCCACGTACCGGAGGCTGAATAGCATTGCCAACACGGAGATGGCCGCTGCGTACAC
GATGGACGAGCGGGAAGTATCGCGGTGGACATACCGATATTTTAGGGCGTTCGCAACCAG
GCCAAACATTCCACGTTCCACGACCGGTCGGAGAGAGTCCTCTGTTCAAGAAGATGCTCT
TTCCCCCCCGTGAACGTATAACAATGCCTTGCTAGAATAGATTTAAGAACGTTTTTTTAC
ATCCACAACAATTGACAGCCGTTTT

consensusID : consensus_7053#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 335
fasta sequence

                              [CAAGAATCGCCACGAGGTGGATTTACGGCGTTCGCCTTTTTGCTTTATTCTGATCGCTTTCTGCTCTCCCTACTGGCTACAAACCGATGGCGAACTGGAGCATCCAAAGTTTACCAATTTAGGACTTTGGGAGCTGTGCTTGCGCAACTTCCAGGACATTCACCGATGGTACGACTATCCGTTCAATGGCTGCATGTGGATATTCGAGGAGGAGTACTACATCATCCACGACTACATACTGCCCGGGTTCTTCATCGCGCGTGCAGGTTCTTTTTCACGCTCTGCTTCACGCTGCTACTGATGGGCGTGATCATGACGCTGATGTNCTTGAGGGC]

[+] EMBL BX469140             [CAAGAATCGCCACGAGGTGGATTTACGGCGTTCGCCTTTTTGCTTTATTCTGATCGCTTTCTGCTCTCCCTACTGGCTACAAACCGATGGCGAACTGGAGCATCCAAAGTTTACCAATTTAGGACTTTGGGAGCTGTGCTTGCGCAACTTCCAGGACATTCACCGATGGTACGACTATCCGTTCAATGGCTGCATGTGGATATTCGAGGAGGAGTACTACATCATCCACGACTACATACTGCCCGGGTTCTTCATCGCGCGTGCAGGTTCTTTTTCACGCTCTGCTTCACGCTGCTACTGATGGGCGTGATCATGACGCTGATGTNCTTGAGGGC]




>consensus_7053#1
CAAGAATCGCCACGAGGTGGATTTACGGCGTTCGCCTTTTTGCTTTATTCTGATCGCTTT
CTGCTCTCCCTACTGGCTACAAACCGATGGCGAACTGGAGCATCCAAAGTTTACCAATTT
AGGACTTTGGGAGCTGTGCTTGCGCAACTTCCAGGACATTCACCGATGGTACGACTATCC
GTTCAATGGCTGCATGTGGATATTCGAGGAGGAGTACTACATCATCCACGACTACATACT
GCCCGGGTTCTTCATCGCGCGTGCAGGTTCTTTTTCACGCTCTGCTTCACGCTGCTACTG
ATGGGCGTGATCATGACGCTGATGTNCTTGAGGGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7053#0      CCGCGGACGCGTGGGCGGACGCGTGGGCGCAAGCACAAGAACGGGAAAGTTTGCGGTCGG 60
consensus_7053#1      -----------------------------------CAAGAATCGCCACG-----AGGTGG 20
                                                         ******  *  * *      *  **

consensus_7053#0      ATTTACGGCGTTCGCCTTTTTG-TTTATTCTGATCGCTTTCTGCTCTCCCTACTGGCTAC 119
consensus_7053#1      ATTTACGGCGTTCGCCTTTTTGCTTTATTCTGATCGCTTTCTGCTCTCCCTACTGGCTAC 80
                      ********************** *************************************

consensus_7053#0      AAACCGATGGCGAACTGGAGCATCCAAAGTTTACCAATTTAGGACTTTGGGAGCTGTGCT 179
consensus_7053#1      AAACCGATGGCGAACTGGAGCATCCAAAGTTTACCAATTTAGGACTTTGGGAGCTGTGCT 140
                      ************************************************************

consensus_7053#0      TGCGCAACTTCCAGGACATTCACCGATGGTACGACTATCCGTTCAATGGCTGCATGTGGA 239
consensus_7053#1      TGCGCAACTTCCAGGACATTCACCGATGGTACGACTATCCGTTCAATGGCTGCATGTGGA 200
                      ************************************************************

consensus_7053#0      TATTCGAGGAGGAGTACTACATCATCCACGACTACATACTGCCCGGGTTCTTCATCGC-C 298
consensus_7053#1      TATTCGAGGAGGAGTACTACATCATCCACGACTACATACTGCCCGGGTTCTTCATCGCGC 260
                      ********************************************************** *

consensus_7053#0      GTGCAG-TTCTTTTTCACGCTCTGCTTCACGCTGCTACTGATGGGCGTGATCATGACGCT 357
consensus_7053#1      GTGCAGGTTCTTTTTCACGCTCTGCTTCACGCTGCTACTGATGGGCGTGATCATGACGCT 320
                      ****** *****************************************************

consensus_7053#0      GATGTTCTTGAGCTGCTCCCGGGACAACGATCGCTACATTATGCTGCTGCTGACGAACGG 417
consensus_7053#1      GATGTNCTTGAGG-GC-------------------------------------------- 335
                      ***** ******  **                                            

consensus_7053#0      GACGGTGCTGCTGCTCGCTGCCCTGTGCGGGCTGATAGCGGTGGCCACGTTCGGCTGCTA 477
consensus_7053#1      ------------------------------------------------------------
                                                                                  

consensus_7053#0      TGGCGATAGCCGCGACTGGATGCCGAACTGGGAGCACAACGATATGGGCTGGTCGTTCGC 537
consensus_7053#1      ------------------------------------------------------------
                                                                                  

consensus_7053#0      GCTGGGCGTCGTCGGCACGTTCGCCCTGTTCCCGGCAGGCGTCCTGTTCATCGTCGAAGC 597
consensus_7053#1      ------------------------------------------------------------
                                                                                  

consensus_7053#0      GCGCCGGGCCACGTACCGGAGGCTGAATAGCATTGCCAACACGGAGATGGCCGCTGCGTA 657
consensus_7053#1      ------------------------------------------------------------
                                                                                  

consensus_7053#0      CACGATGGACGAGCGGGAAGTATCGCGGTGGACATACCGATATTTTAGGGCGTTCGCAAC 717
consensus_7053#1      ------------------------------------------------------------
                                                                                  

consensus_7053#0      CAGGCCAAACATTCCACGTTCCACGACCGGTCGGAGAGAGTCCTCTGTTCAAGAAGATGC 777
consensus_7053#1      ------------------------------------------------------------
                                                                                  

consensus_7053#0      TCTTTCCCCCCCGTGAACGTATAACAATGCCTTGCTAGAATAGATTTAAGAACGTTTTTT 837
consensus_7053#1      ------------------------------------------------------------
                                                                                  

consensus_7053#0      TACATCCACAACAATTGACAGCCGTTTT 865
consensus_7053#1      ----------------------------