cluster # 7054

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Anopheles gambiae
cluster # 7054 cluster # 7054 Sequences # 6 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7054#0 length = 1102 sequences # 3

consensus_7054#1 length = 682 sequences # 3

consensusID : consensus_7054#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1102
fasta sequence

                              [TGCTCTACACACTAAGGCCATTTTAAGATGGAAATAAAATCCTACTTACAACACAATATTGTACCTAAACAGAATGAAAAACATAACCTCTTTCCTAAACGACATTTCATAAATTCTACAGTAAACGCCTAACACATCGTAAACGTGCACTTTATGCACAGTTACGTTTTTCCTCTGCTATTTTTAAACGCACAAAC-AAAAAAACATAAATGTTTCGTTTTACACGTTTACATTACATCCCGAAAGGCCACAGAGAAACAAACAAAACGAATCCAATCAAATGTACACGGAACGCCCATGCGATCTCAGCCATCGCAAAATTACCTATTGTTCGTTTGTTTGTTTGATTTGTTTCATACCGACTTTTTCTTACTTAAAAAAATAAGAACCGCTCTTAGCAAAAACGAAGAGCGAAAAGAACTCTTAACGTTACAACGAAATAGAATTTGTCCCTACTAACGTGTGAGTTTGTTTTTCCTTCTCTCTCTTTCACGCTAACTATGTACAAATGAACACGCACACGCACGCACGCAAACACACTCCGGAAAGAAAGGGTTTTCTCCAAAATGAGAAAACATTCACTAGGAAGAAAGGCAATAGAAAGAGCGGTAGGGGAATGGGGAAACGATTCCCCATGTATACGATTTGTTAATAGTGTGTGTGTGCCTATGATTTAACAATTGCTTACCGTGAACGTGTGTGTGTGTTTCTGTTTTTTTAGCCTTTCCTGATAAAATCGTCCTTTCCTCAACTACATTTACATGCGCTGCAGGTGGAAACCCATCTCCATTCAGTCAAAGCCGAACCTAAACGTTATGTCATTTTCGGTGAAGAAAATTGTAACGCGAAGGCGCTGCTACTTTGATGCACATAAGAATGTCCCTACAGCTTCCCTACGACTACCACTACTAGCAGTAACACTAACACTATCCTGAAGGGTTCTACACACTGCTTAACCGTTAAATTATGGCAAATACAAAAAAAAACACAGAGAGTCCGCCGATTGTGTTGTGAAGGAAAAAGAGCATGATTACCATGGTGATGTGCGCCTCAGCCTCAGCCACACCGATGAAGAGGACACAACAGATATTGTATTTACCGG]

[+] EMBL CNS08ICB             [TGCTCTACACACTAAGGCCATTTTAAGATGGAAATAAAATCCTACTTACAACACAATATTGTACCTAAACAGAATGAAAAACATAACCTCTTTCCTAAACGACATTTCATAAATTCTACAGTAAACGCCTAACACATCGTAAACGTGCACTTTATGCACAGTTACGTTTTTCCTCTGCTATTTTTAAACGCACAAAC AAAAAAACATAAATGTTTCGTTTTACACGTTTACATTACATCCCGAAAGGCCACAGAGAAACAAACAAAACGAATCCAATCAAATGTACACGGAACGCCCATGCGATCTCAGCCATCGCAAAATTACCTATTGTTCGTTTGTTTGTTTGATTTGTTTCATACCGACTTTTTCTTACTTAAAAAAATAAGAACCGCTCTTAGCAAAAACGAAGAGCGAAAAGAACTCTTAACGTTACAACGAAATAGAATTTGTCCCTACTAACGTGTGAGTTTGTTTTTCCTTCTCTCTCTTTCACGCTAACTATGTACAAATGAACACGCACACGCACGCACGCAAACACACTCCGGAAAGAAAGGGTTTTCTCCAAAATGAGAAAACATTCACTAGGAAGAAAGGCAATAGAAAGAGCGGTAGGGGAATGGGGAAACGATTCCCCATGTATACGATTTGTTAATAGTGTGTGTTTTCCTATTATTTAACAATTGCTTACCGTGAACGTGTGTTTTTTTTTCTGTTTTTTTAGCCTTTCCTGATAAAATCGTCCTTTCCTCAACTACATTTACATGCGCTGCAGGTGGAAACCCATCTCCATTCAGTCAAAGCCGAACCTAAACGTTATGTCAT                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS08ICA             [                                                                                                                                                    ACTTTATGCACAGTTACGTTTTTCCTCTGCTATTTTTAAACGCACAAACAAAAAAAACATAAATGTTTCGTTTTACACGTTTACATTACATCCCGAAAGGCCACAGAGAAACAAACAAAACGAATCCAATCAAATGTACACGGAACGCCCATGCGATCTCAGCCATCGCAAAATTACCTATTGTTCGTTTGTTTGTTTGATTTGTTTCATACCGACTTTTTCTTACTTAAAAAAATAAGAACCGCTCTTAGCAAAAACGAAGAGCGAAAAGAACTCTTAACGTTACAACGAAATAGAATTTGTCCCTACTAACGTGTGAGTGTGTTTTTCCTTCTCTCTCTTTCACGCTAACTATGTACAAATGAACACGCACACGCACGCACGCAAACACACTCCGGAAAGAAAGGGTTTTCTCCAAAATGAGAAAACATTCACTAGGAAGAAAGGCAATAGAAAGAGCGGTAGGGGAATGGGGAAACGATTCCCCATGTATACGATTTGTTAATAGTGTGTGTGTGCCTATGATTTAACAATTGCTTACCGTGAACGTGTGTGTGTGTTTCTGTTTTTTTAGCCTTTCCTGATAAAATCGTCCTTTCCTCAACTACATTTACATGCGCTGCAGGTGGAAACCCATCTCCATTCAGTCAAAGCCGAACCTAAACGTTATGTCATTTTCGGTGAAGAAAATTGTAACGCGAAGGCGCTGCTACTTTGATGCACATAAGAATGTCCCTACAGCTTCCCTACGACTACCACTACTAGCAGTAACACTAACACTATCCTGAAGGGTTCTACACACTGCTTAACCGTTAAAT                                                                                                                                         ]
[-] EMBL BM640431             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATGAACACGCACACGCACGCACGCAAACACACTCGGGAAAGAAAGGGTTTTCTCCAAAATGAGAAAACATTCACTAGGAAGAAAGGCAATAGAAAGAGCGGTAGGGGAATGGGGAAACGATTCCCCATGTATACGATTTGTTAATAGTGTGTGTGTGCCTATGATTTAACAATTGCTTACCGTGAACGTGTGTGTGTGTTTCTGTTTTTTTAGCCTTTCCTGATAAAATCGTCCTTTCCTCAACTACATTTACATGCGCTGCAGGTGGAAACCCATCTCCATTCAGTCAAAGCCGAACCTAAACGTTATGTCATTTTCGGTGAAGAAAATTGTAACGCGAAGGCGCTGCTACTTTGATGCACATAAGAATGTCCCTACAGCTTCCCTACGACTACCACTACTAGCAGTAACACTAACACTATCCTGAAGGGTTCTACACACTGCTTAACCGTTAAATTATGGCAAATACAAAAAAAAACACAGAGAGTCCGCCGATTGTGTTGTGAAGGAAAAAGAGCATGATTACCATGGTGATGTGCGCCTCAGCCTCAGCCACACCGATGAAGAGGACACAACAGATATTGTATTTACCGG]




>consensus_7054#0
TGCTCTACACACTAAGGCCATTTTAAGATGGAAATAAAATCCTACTTACAACACAATATT
GTACCTAAACAGAATGAAAAACATAACCTCTTTCCTAAACGACATTTCATAAATTCTACA
GTAAACGCCTAACACATCGTAAACGTGCACTTTATGCACAGTTACGTTTTTCCTCTGCTA
TTTTTAAACGCACAAACAAAAAAACATAAATGTTTCGTTTTACACGTTTACATTACATCC
CGAAAGGCCACAGAGAAACAAACAAAACGAATCCAATCAAATGTACACGGAACGCCCATG
CGATCTCAGCCATCGCAAAATTACCTATTGTTCGTTTGTTTGTTTGATTTGTTTCATACC
GACTTTTTCTTACTTAAAAAAATAAGAACCGCTCTTAGCAAAAACGAAGAGCGAAAAGAA
CTCTTAACGTTACAACGAAATAGAATTTGTCCCTACTAACGTGTGAGTTTGTTTTTCCTT
CTCTCTCTTTCACGCTAACTATGTACAAATGAACACGCACACGCACGCACGCAAACACAC
TCCGGAAAGAAAGGGTTTTCTCCAAAATGAGAAAACATTCACTAGGAAGAAAGGCAATAG
AAAGAGCGGTAGGGGAATGGGGAAACGATTCCCCATGTATACGATTTGTTAATAGTGTGT
GTGTGCCTATGATTTAACAATTGCTTACCGTGAACGTGTGTGTGTGTTTCTGTTTTTTTA
GCCTTTCCTGATAAAATCGTCCTTTCCTCAACTACATTTACATGCGCTGCAGGTGGAAAC
CCATCTCCATTCAGTCAAAGCCGAACCTAAACGTTATGTCATTTTCGGTGAAGAAAATTG
TAACGCGAAGGCGCTGCTACTTTGATGCACATAAGAATGTCCCTACAGCTTCCCTACGAC
TACCACTACTAGCAGTAACACTAACACTATCCTGAAGGGTTCTACACACTGCTTAACCGT
TAAATTATGGCAAATACAAAAAAAAACACAGAGAGTCCGCCGATTGTGTTGTGAAGGAAA
AAGAGCATGATTACCATGGTGATGTGCGCCTCAGCCTCAGCCACACCGATGAAGAGGACA
CAACAGATATTGTATTTACCGG

consensusID : consensus_7054#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 682
fasta sequence

                              [CATAAATTCTACAGTAAACGCCTAACACATCGTAAACGTGCACTTTATACACAGTTACGTTTTTCCTCTACTATTTTTTATCGCACAAAGAAAAAAACATAAATGTTTCGTTTTACACGTTTACATTACATCCCGAAAGGCCACAGAG-AAACAAACAAAACGAATCCAATCAAATGTACACGGAACCGCCATGCGATCTTAGCCATCGCAAAATTACCTATTGTTAGTTTGTTTGTTTGTTTGTTTGTTTTGTTAACCGACTTTTTCTTACTTAAAAAATAAGAACCGCTCTTAGCAAAAACGAAGAGCGAAAAGAACTCTTAACGTTACAACGAAATAGAATTTGTCCCTACTAGCGTGTGTTTTTTCTCCCTTTCACACTAACTATGTACAAATGAACACGCACACGCACGCACGCAAACACACTCCGGAAAGAAAGGGTTTTCTCCAAAATGAGAAAACATTCACTAAGAAGAAAGGCAATAGAAAGAAGAGGATAGGAATGGGGAAACGATTCCCCACTTACACGGTTCGTGTTAATAGTGTGTGTGTGCCTATGATTTAACAATTGCTTACCGTGAACGTGTGTGTGTGTGTGTTTCTGTTGTTTTTAGCCTTTTCTGATAAAATCGTCCTTTCCTCAACTAAATTTACATGCGCTGCAGGTGGAAACCCGTCTCCA]

[-] EMBL BX608563             [CATAAATTCTACAGTAAACGCCTAACACATCGTAAACGTGCACTTTATACACAGTTACGTTTTTCCTCTACTATTTTTTATCGCACAAAGAAAAAAACATAAATGTTTCGTTTTACACGTTTACATTACATCCCGAAAGGCCACAGAG AAACAAACAAAACGAATCCAATCAAATGTACACGGAACCGCCATGCGATCTTAGCCATCGCAAAATTACCTATTGTTCGTTTGTTTGTTTGTTTGTTTGTTTTGTTAACCGACTTTTTCTTACTTAAAAAATAAGAACCGCTCTTAGCAAAAACGAAGAGCGAAAAGAACTCTTAACGTTACAACGAAATAGAATTTGTCCCTACTAGCGTGTGTTTTTTCTCCCTTTCACACTAACTATGTACAAATGAACACGCACACGCACGCACGCAAACACACTCCGGAAAGAAAGGGTTTTCTCCAAAATGAGAAAACATTCACTAAGAAGAAAGGCAATAGAAAGAAGAGGATAGGAATGGGGAAACGATTCCCCACTTACACGGTTCGTGTTAATAGTGTGTGTGTGCCTATGATTTAACAATTGCTTACCGTGAACGTGTGTGTGTGTGTGTTTCTGTTGTTTTTAGCCTTTTCTGATAAAATCGTCCTTTCCTCAACTAAATTTACATGCGCTGCAGGTGGAAACCCGTCTCCA]
[-] EMBL AGA280915            [                                TAAACGTGCACTTTATACACAGATACGTTTTTCCTATACTATTTTTTATCGCCCAAAGAAAAAAACGTAAATGTTTCGTTTTACACGTTTACCTTACATCCCGAAAGGCCACAGAGAAAACAAACAAAACGAATCCAATCAAATGTACACGGAACCGCCATGCGATCTTAGCCATCGCAAAATTACCTATTGTTAGTTTGTTTGTTTGTTTGTTTGTTTTGTTAACCGACTTTTTCTTACTTAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AGA282544            [                                          CTTTATACACAGTTACGTTTTTCCTCTACTATTTTTTATCGCACAAAGAAAAAAACATAAATGTTTCGTTTTACACGTTTACATTACATCCCGAAAGGCCACAGAG AAACAAACAAAACGAATCCAATCAAATGTACACGGAACCGCCATGCGATCTTAGCCATCGCAAAATTACCTATTGTTAGTTTGTTTGTTTGTTTGTTTGTTTTGTTAACCGACTTTTTCTTACTTAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                   ]




>consensus_7054#1
CATAAATTCTACAGTAAACGCCTAACACATCGTAAACGTGCACTTTATACACAGTTACGT
TTTTCCTCTACTATTTTTTATCGCACAAAGAAAAAAACATAAATGTTTCGTTTTACACGT
TTACATTACATCCCGAAAGGCCACAGAGAAACAAACAAAACGAATCCAATCAAATGTACA
CGGAACCGCCATGCGATCTTAGCCATCGCAAAATTACCTATTGTTAGTTTGTTTGTTTGT
TTGTTTGTTTTGTTAACCGACTTTTTCTTACTTAAAAAATAAGAACCGCTCTTAGCAAAA
ACGAAGAGCGAAAAGAACTCTTAACGTTACAACGAAATAGAATTTGTCCCTACTAGCGTG
TGTTTTTTCTCCCTTTCACACTAACTATGTACAAATGAACACGCACACGCACGCACGCAA
ACACACTCCGGAAAGAAAGGGTTTTCTCCAAAATGAGAAAACATTCACTAAGAAGAAAGG
CAATAGAAAGAAGAGGATAGGAATGGGGAAACGATTCCCCACTTACACGGTTCGTGTTAA
TAGTGTGTGTGTGCCTATGATTTAACAATTGCTTACCGTGAACGTGTGTGTGTGTGTGTT
TCTGTTGTTTTTAGCCTTTTCTGATAAAATCGTCCTTTCCTCAACTAAATTTACATGCGC
TGCAGGTGGAAACCCGTCTCCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7054#0      TGCTCTACACACTAAGGCCATTTTAAGATGGAAATAAAATCCTACTTACAACACAATATT 60
consensus_7054#1      ------------------------------------------------------------
                                                                                  

consensus_7054#0      GTACCTAAACAGAATGAAAAACATAACCTCTTTCCTAAACGACATTTCATAAATTCTACA 120
consensus_7054#1      -----------------------------------------------CATAAATTCTACA 13
                                                                     *************

consensus_7054#0      GTAAACGCCTAACACATCGTAAACGTGCACTTTATGCACAGTTACGTTTTTCCTCTGCTA 180
consensus_7054#1      GTAAACGCCTAACACATCGTAAACGTGCACTTTATACACAGTTACGTTTTTCCTCTACTA 73
                      *********************************** ******************** ***

consensus_7054#0      TTTTTAAACGCACAAACAAAAAAACATAAATGTTTCGTTTTACACGTTTACATTACATCC 240
consensus_7054#1      TTTTTTATCGCACAAAGAAAAAAACATAAATGTTTCGTTTTACACGTTTACATTACATCC 133
                      ***** * ******** *******************************************

consensus_7054#0      CGAAAGGCCACAGAGAAACAAACAAAACGAATCCAATCAAATGTACACGGAACGCCCATG 300
consensus_7054#1      CGAAAGGCCACAGAGAAACAAACAAAACGAATCCAATCAAATGTACACGGAACCGCCATG 193
                      *****************************************************  *****

consensus_7054#0      CGATCTCAGCCATCGCAAAATTACCTATTGTTCGTTTGTTTGTTTG---ATTTGTTTCAT 357
consensus_7054#1      CGATCTTAGCCATCGCAAAATTACCTATTGTTAGTTTGTTTGTTTGTTTGTTTGTTTTGT 253
                      ****** ************************* *************    *******  *

consensus_7054#0      --ACCGACTTTTTCTTACTTAAAAAAATAAGAACCGCTCTTAGCAAAAACGAAGAGCGAA 415
consensus_7054#1      TAACCGACTTTTTCTTACTTAAAAAA-TAAGAACCGCTCTTAGCAAAAACGAAGAGCGAA 312
                        ************************ *********************************

consensus_7054#0      AAGAACTCTTAACGTTACAACGAAATAGAATTTGTCCCTACTAACGTGTGAGTTTGTTTT 475
consensus_7054#1      AAGAACTCTTAACGTTACAACGAAATAGAATTTGTCCCTACTAGCGTGTG---------- 362
                      ******************************************* ******          

consensus_7054#0      TCCTTCTCTCTCTTTCACGCTAACTATGTACAAATGAACACGCACACGCACGCACGCAAA 535
consensus_7054#1      -TTTTTTCTCCCTTTCACACTAACTATGTACAAATGAACACGCACACGCACGCACGCAAA 421
                         ** **** ******* *****************************************

consensus_7054#0      CACACTCCGGAAAGAAAGGGTTTTCTCCAAAATGAGAAAACATTCACTAGGAAGAAAGGC 595
consensus_7054#1      CACACTCCGGAAAGAAAGGGTTTTCTCCAAAATGAGAAAACATTCACTAAGAAGAAAGGC 481
                      ************************************************* **********

consensus_7054#0      AATAGAAAGAGCGGTAGGGGAATGGGGAAACGATTCCCCATGTATACGATT--TGTTAAT 653
consensus_7054#1      AATAGAAAGAAGAGGATAGGAATGGGGAAACGATTCCCCACTTACACGGTTCGTGTTAAT 541
                      **********   * *  **********************  ** *** **  *******

consensus_7054#0      AGTGTGTGTGTGCCTATGATTTAACAATTGCTTACCGTGAACGTGTGTGTGTGT----TT 709
consensus_7054#1      AGTGTGTGTGTGCCTATGATTTAACAATTGCTTACCGTGAACGTGTGTGTGTGTGTGTTT 601
                      ******************************************************    **

consensus_7054#0      CTGTT-TTTTTAGCCTTTCCTGATAAAATCGTCCTTTCCTCAACTACATTTACATGCGCT 768
consensus_7054#1      CTGTTGTTTTTAGCCTTTTCTGATAAAATCGTCCTTTCCTCAACTAAATTTACATGCGCT 661
                      ***** ************ *************************** *************

consensus_7054#0      GCAGGTGGAAACCCATCTCCATTCAGTCAAAGCCGAACCTAAACGTTATGTCATTTTCGG 828
consensus_7054#1      GCAGGTGGAAACCCGTCTCCA--------------------------------------- 682
                      ************** ******                                       

consensus_7054#0      TGAAGAAAATTGTAACGCGAAGGCGCTGCTACTTTGATGCACATAAGAATGTCCCTACAG 888
consensus_7054#1      ------------------------------------------------------------
                                                                                  

consensus_7054#0      CTTCCCTACGACTACCACTACTAGCAGTAACACTAACACTATCCTGAAGGGTTCTACACA 948
consensus_7054#1      ------------------------------------------------------------
                                                                                  

consensus_7054#0      CTGCTTAACCGTTAAATTATGGCAAATACAAAAAAAAACACAGAGAGTCCGCCGATTGTG 1008
consensus_7054#1      ------------------------------------------------------------
                                                                                  

consensus_7054#0      TTGTGAAGGAAAAAGAGCATGATTACCATGGTGATGTGCGCCTCAGCCTCAGCCACACCG 1068
consensus_7054#1      ------------------------------------------------------------
                                                                                  

consensus_7054#0      ATGAAGAGGACACAACAGATATTGTATTTACCGG 1102
consensus_7054#1      ----------------------------------