cluster # 7086

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Anopheles gambiae
cluster # 7086 cluster # 7086 Sequences # 6 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7086#0 length = 744 sequences # 2

consensus_7086#1 length = 734 sequences # 4

consensusID : consensus_7086#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 744
fasta sequence

                              [GATCGCCCGAGGTTCCAGCATCTGATAGAAGAAGATCGGCTGTAAACACACGTCTGCGTTTGCTATTGACGCGATCGCAACCAACTGCGAACAAAAATTGCCCGTCTGCAGCAGCAGCAGCCGAAAGTGAACAAACAGTCAATTTACCAGAGTGACGAACGAAAAACCGGCAGGCGCGTGTGCTCTAAACGTTCAGAGATTCATCCAGAACCGTATACAATGGCCACCATTCGCATACCACGGTGGGCGGGGATCGGTGTCGGTCTGCTGGCGGTACTCCTGCTACTCGGTGTGGAGGCGCAAGTTCCTGGCTTTGGCAAATGCCCCAAAGTACCGGTGGTGGAGAACTTCGACACGTATGCGTACCTGGGCCGCTGGTACGAGCAGGAAAAGTATCCGTTCTTCTTCGAGCTGGGTGGGAAGTGTATAACGGCCGACTATTCGCTCAACCCGGACGGCACGATCGGTGTGCTGAACACGCAGAAGAATTCCATAACGGGCAATGAGAACAGTATCGTTGGTTCTGCACGTATCGTTCAGTCCG-CAGATTGGCGGTCAGGTTCCCGAGTGCACCATTTAACGTCGAAGCTCCATACTGGGTGGTCGGTACCGACTACAAGACCTTTGCCGTCGTTTACGCGTGCTCGGATCTGCGCGGATTTATCAATGCTAAGGTAGCCATGGATTTTGACCCGTAAGCGGAAT-CGGACNATTGAGACGATGAGAAAGGCGTACTCCGTGCTG]

[+] EMBL AL931812             [GATCGCCCGAGGTTCCAGCATCTGATAGAAGAAGATCGGCTGTAAACACACGTCTGCGTTTGCTATTGACGCGATCGCAACCAACTGCGAACAAAAATTGCCCGTCTGCAGCAGCAGCAGCCGAAAGTGAACAAACAGTCAATTTACCAGAGTGACGAACGAAAAACCGGCAGGCGCGTGTGCTCTAAACGTTCAGAGATTCATCCAGAACCGTATACAATGGCCACCATTCGCATACCACGGTGGGCGGGGATCGGTGTCGGTCTGCTGGCGGTACTCCTGCTACTCGGTGTGGAGGCGCAAGTTCCTGGCTTTGGCAAATGCCCCAAAGTACCGGTGGTGGAGAACTTCGACACGTATGCGTACCTGGGCCGCTGGTACGAGCAGGAAAAGTATCCGTTCTTCTTCGAGCTGGGTGGGAAGTGTATAACGGCCGACTATTCGCTCAACCCGGACGGCACGATCGGTGTGCTGAACACGCAGAAGAATTCCATAACGGGCAATGAGAACAGTATCGTTGGTTCTGCACGTATCGTTCAGTCCG CAGATTGGCGGTCAGGTTCCCGAGTGCACCATTTAACGTCGAAGCTCCATACTGGGTGGTCGGTACCGACTACAAGACCTTTGCCGTCGTTTACGCGTGCTCGGATCTGCGCGGATTTATCAATGCTAAGGTAGCCATGGATTTTGACCCGTAAGCGGAAT CGGACNATTGAGACGATGAGAAAGGCGTACTCCGTGCTG]
[+] EMBL BX626778             [                                      GCTGTAAACACACGTCTGCGTTTGCTATTGACGCGATCGCAACCAACTGCGAACAAAAATTGCCCGTCTGCAGCAGCAGCAGCCGAAAGTGAACAAACAGTCAATTTACCAGAGTGACGAACGAAAAACCGGCAGGCGCGTGTGCTCTAAATCTTCAGAGATTCATCCAGAACCGTATACAATGGCCACCATTCGCATACCACGGTGGGCGGGGATCGGTGTCGGTCTGCTGGCGGTACTCCTGCTACTCGGTGTGGAGGCGCAAGTTCCTGGCTTTGGCAAATGCCCCAAAGTACCGGTGGTGGAGAACTTCGACACGTATGCGTACCTGGGCCGCTGGTACGAGCAGGAAAAGTATCCGTTCTTCTTCGAGCTGGGTGGGAAGTGTATAACGGCCGACTATTCGCTCAACCCGGACGGCACGATCGGTGTGCTGAACACGCAGAAGAATTCCATAACGGGCAATGAGAACAGTATCGTTGGTTCTGCACGTATCGTTCAGTCCGCCAGATTGGCGGTCAGGTTCCCGAGTGCACCATTTAACGTCGAAGCTCCATACTGGGTGGTCGGTACCGACTACAAGACCTTTGCCGTCGTTTACGCGTGCTCGGATCTGCGCGGATTTATCAATGCTAAGGTAG CATGGATTTTGACCCGTAAGCGGCATCCGGAC ATTG                             ]




>consensus_7086#0
GATCGCCCGAGGTTCCAGCATCTGATAGAAGAAGATCGGCTGTAAACACACGTCTGCGTT
TGCTATTGACGCGATCGCAACCAACTGCGAACAAAAATTGCCCGTCTGCAGCAGCAGCAG
CCGAAAGTGAACAAACAGTCAATTTACCAGAGTGACGAACGAAAAACCGGCAGGCGCGTG
TGCTCTAAACGTTCAGAGATTCATCCAGAACCGTATACAATGGCCACCATTCGCATACCA
CGGTGGGCGGGGATCGGTGTCGGTCTGCTGGCGGTACTCCTGCTACTCGGTGTGGAGGCG
CAAGTTCCTGGCTTTGGCAAATGCCCCAAAGTACCGGTGGTGGAGAACTTCGACACGTAT
GCGTACCTGGGCCGCTGGTACGAGCAGGAAAAGTATCCGTTCTTCTTCGAGCTGGGTGGG
AAGTGTATAACGGCCGACTATTCGCTCAACCCGGACGGCACGATCGGTGTGCTGAACACG
CAGAAGAATTCCATAACGGGCAATGAGAACAGTATCGTTGGTTCTGCACGTATCGTTCAG
TCCGCAGATTGGCGGTCAGGTTCCCGAGTGCACCATTTAACGTCGAAGCTCCATACTGGG
TGGTCGGTACCGACTACAAGACCTTTGCCGTCGTTTACGCGTGCTCGGATCTGCGCGGAT
TTATCAATGCTAAGGTAGCCATGGATTTTGACCCGTAAGCGGAATCGGACNATTGAGACG
ATGAGAAAGGCGTACTCCGTGCTG

consensusID : consensus_7086#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 734
fasta sequence

                              [AGATCGNGCACGAGGTGCAAACGGTCGATCGACGCGTGTGCCCCTATCTGCGAGTCTGAAACTTGTGTGAAGCTGTGAAGTGAGAGTAACGAAGCGTGTGTAAAAAAGCAAACAAACGGAAAAAATAAGTGCGCACGTAAAATAGTGGTTGTGCATTTTGTGTTGTGTTGAAGTTCAAAGTTCGGAATTTCGGAAAGATTATTCCAGCATCTTGATAGAAGAAGATCGGCTGTAAACACACGTCTGCGTTTGCTATTGACGCGATCGCAACCAACTGCGAACAAAAATTGCCCGTCTGCAGCAGCAGCAGCCGAAAGTGAACAAACAGTCAATTTACCAGAGTGACGAACGAAAAACCGGCAGGCGCGTGTGCTCTAAACGTTCAGAGATTCATCCAGAACCGTATACAATGGCCACCATTCGCATACCACGGTGGGCGGGGATCGGTGTCGGTCTGCTGGCGGTACTCCTGCTACTCGGTGTGGAGGCGCAAGTTCCTGGCTTTGGCAAATGCCCCAAAGTACCGGTGGTGGAGAACTTCGACACGTATGCGTACCTGGGCCG-CTGGTACGAGCAGGAAAAGTATCCGTTCTTCTTCGAGCTGGGT-GGGAA-GTGTATAACGGCCGACTATTCGCTCAACCCGGACGGCAC-GATCGG--TGTGCTGAACACGCAGAAGAATTCCATAACGGGCAATGAGAACAGTATCGTTGGGTCTGCACGTATCGTTCAGTCCG]

[+] EMBL BX469605             [AGATCGNGCACGAGGTGCAAACGGTCGATCGACGCGTGTGCCCCTATCTGCGAGTCTGAAACTTGTGTGAAGCTGTGAAGTGAGAGTAACGAAGCGTGTGTAAAAAAGCAAACAAACGGAAAAAATAAGTGCGCACGTAAAATAGTGGTTGTGCATTTTGTGTTGTGTTGAAGTTCAAAGTTCGGAATTTCGGAAAGATTATTCCAGCATCTTGATAGAAGAAGATCGGCTGTAAACACACGTCTGCGTTTGCTATTGACGCGATCGCAACCAACTGCGAACAAAAATTGCCCGTCTGCAGCAGCAGCAGCCGAAAGTGAACAAACAGTCAATTTACCAGAGTGACGAACGAAAAACCGGCAGGCGCGTGTGCTCTAAACGTTCAGAGATTCATCCAGAACCGTATACAATGGCCACCATTCGCATACCACGGTGGGCGGGGATCGGTGTCGGTCTGCTGGCGGTACTCCTGCTACTCGGTGTGGAGGCGCAAGTTCCTGGCTTTGGCAAATGCCCCAAAGTACCGGTGGTGGAGAACTTCGACACGTATGCGTACCTGGGCCGACTGGTACGAGCAGGAAAAGTATCCGTTCTTCTTCGAGCTGGGTGGGGAAGGTGTATAACGG CGACTATTCGCTCAACCCGGACGGCACGGATCGGGATGTGCTGAACACn                                                                ]
[+] EMBL BX626781             [                     CGGTCGATCGACGCGTGTGCCCCTATCTGCGAGTCTGAAACTTGTGTGAAGCTGTGAAGTGAGAGTAACGAAGCGTGTGTAAAAAAGCAAACAAACGGAAAAAATAAGTGCGCACGTAAAATAGTGGTTGTGCATTTTGTGTTGTGTTGAAGTTCAAAGTTCGGAATTTCGGAAAGATTATTCCAGCATCTTGATAGAAGAAGATCGGCTGTAAACACACGTCTGCGTTTGCTATTGACGCGATCGCAACCAACTGCGAACAAAAATTGCCCGTCTGCAGCAGCAGCAGCCGAAAGTGAACAAACAGTCAATTTACCAGAGTGACGAACGAAAAACCGGCAGGCGCGTGTGCTCTAAACGTTCAGAGATTCATCCAGAACCGTATACAATGGCCACCATTCGCATACCACGGTGGGCGGGGATCGGTGTCGGTCTGCTGGCGGTACTCCTGCTACTCGGTGTGGAGGCGCAAGTTCCTGGCTTTGGCAAATGCCCCAAAGTACCGGTGGTGGAGAACTTCGACACGTATGCGTACCTGGGCCG CTGGTACGAGCANGAAAAGTATCCGTTCTTCTTCGAGCTGGGT GGGAA GTGTATAACGGCCGACTATTCGCTCAACCCGGACGGCAC GATCGG  TGTGCTGAACACGCAGAAGAATTCCATAACGGGCAATGAGAACAGTATCGTTGGGTCTGCACGTATCGTTCAGTCCG]
[+] EMBL BX623060             [                                                        TGAAACTTGTGTGAAGCTGTGAAGTGAGAGTAACGAAGCGTGTGTAAAAAAGCAAACAAACGGAAAAAATAAGTGCGCACGTAAAATAGTGGTTGTGCATTTTGTGTTGTGTTGAAGTTCAAAGTTCGGAATTTCGGAAAGATTATTCCAGCATCTTGATAGAAGAAGATCGGCTGTAAACACACGTCTGCGTTTGCTATTGACGCGATCGCAACCAACTGCGAACAAAAATTGCCCGTCTGCAGCAGCAGCAGCCGAAAGTGAACAAACAGTCAATTTACCAGAGTGACGAACGAAAAACCGGCAGGCGCGTGTGCTCTAAACGTTCAGAGATTCATCCAGAACCGTATACAATGGCCACCATTCGCATACCACGGTGGGCGGGGATCGGTGTCGGTCTGCTGGCGGTACTCCTGCTACTCGGTGTGGAGGCGCAAGTTCCTGGCTTTGGCAAATGCCCCAAAGTACCGGTGGTGGAGAACTTCGACACGTATGCGTACCTGGGCCG CTGGTACGAGCAGGAAAAGTATCCGTTCTTCTTCGAGCTGGGT GGGAA GTGTATAACGGCCGACTATTCGCTCAACCCGGACGGCAC GATCGG  TGTGCTGAACACGCAGAAGAATTCCATAACNGGCAATGAGAACAGTATCGTTG                        ]
[+] EMBL BX621714             [                                                                          GTGAAGTGAGAGTAACGAAGCGTGTGTAAAAAAGCAAACAAACGGAAAAAATAAGTGCGCACGTAAAATAGTGGTTGTGCATTTTGTGTTGTGTTGAAGTTCAAAGTTCGGAATTTCGGAAAGATTATTCCAGCATCTTGATAGAAGAAGATCGGCTGTAAACACACGTCTGCGTTTGCTATTGACGCGATCGCAACCAACTGCGAACAAAAATTGCCCGTCTGCAGCAGCAGCAGCCGAAAGTGAACAAACAGTCAATTTACCAGAGTGACGAACGAAAAACCGGCAGGCGCGTGTGCTCTAAACGTTCAGAGATTCATCCAGAACCGTATACAATGGCCACCATTCGCATACCACGGTGGGCGGGGATCGGTGTCGGTCTGCTGGCGGTACTCCTGCTACTCGGTGTGGAGGCGCAAGTTCCTGGCTTTGGCAAATGCCCCAAAGTACCGGTGGTGGAGAACTTCGACACGTATGCGTACCTGGGCCG CTGGTACGAGCAGGAAAAGTATCCGTTCTTCTTCGAGCTGGGT GGGAA GTGTATAACGGCCGACTATTCGCTCAACCCGGACGGCAC GATCGG  TGTGCTG                                                                      ]




>consensus_7086#1
AGATCGNGCACGAGGTGCAAACGGTCGATCGACGCGTGTGCCCCTATCTGCGAGTCTGAA
ACTTGTGTGAAGCTGTGAAGTGAGAGTAACGAAGCGTGTGTAAAAAAGCAAACAAACGGA
AAAAATAAGTGCGCACGTAAAATAGTGGTTGTGCATTTTGTGTTGTGTTGAAGTTCAAAG
TTCGGAATTTCGGAAAGATTATTCCAGCATCTTGATAGAAGAAGATCGGCTGTAAACACA
CGTCTGCGTTTGCTATTGACGCGATCGCAACCAACTGCGAACAAAAATTGCCCGTCTGCA
GCAGCAGCAGCCGAAAGTGAACAAACAGTCAATTTACCAGAGTGACGAACGAAAAACCGG
CAGGCGCGTGTGCTCTAAACGTTCAGAGATTCATCCAGAACCGTATACAATGGCCACCAT
TCGCATACCACGGTGGGCGGGGATCGGTGTCGGTCTGCTGGCGGTACTCCTGCTACTCGG
TGTGGAGGCGCAAGTTCCTGGCTTTGGCAAATGCCCCAAAGTACCGGTGGTGGAGAACTT
CGACACGTATGCGTACCTGGGCCGCTGGTACGAGCAGGAAAAGTATCCGTTCTTCTTCGA
GCTGGGTGGGAAGTGTATAACGGCCGACTATTCGCTCAACCCGGACGGCACGATCGGTGT
GCTGAACACGCAGAAGAATTCCATAACGGGCAATGAGAACAGTATCGTTGGGTCTGCACG
TATCGTTCAGTCCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7086#0      ------------------------------------------------------------
consensus_7086#1      AGATCGNGCACGAGGTGCAAACGGTCGATCGACGCGTGTGCCCCTATCTGCGAGTCTGAA 60
                                                                                  

consensus_7086#0      ------------------------------------------------------------
consensus_7086#1      ACTTGTGTGAAGCTGTGAAGTGAGAGTAACGAAGCGTGTGTAAAAAAGCAAACAAACGGA 120
                                                                                  

consensus_7086#0      ------------------------------------------------------------
consensus_7086#1      AAAAATAAGTGCGCACGTAAAATAGTGGTTGTGCATTTTGTGTTGTGTTGAAGTTCAAAG 180
                                                                                  

consensus_7086#0      -----GATCGCCCGAGG----TTCCAGCATCT-GATAGAAGAAGATCGGCTGTAAACACA 50
consensus_7086#1      TTCGGAATTTCGGAAAGATTATTCCAGCATCTTGATAGAAGAAGATCGGCTGTAAACACA 240
                            **  *   * *    *********** ***************************

consensus_7086#0      CGTCTGCGTTTGCTATTGACGCGATCGCAACCAACTGCGAACAAAAATTGCCCGTCTGCA 110
consensus_7086#1      CGTCTGCGTTTGCTATTGACGCGATCGCAACCAACTGCGAACAAAAATTGCCCGTCTGCA 300
                      ************************************************************

consensus_7086#0      GCAGCAGCAGCCGAAAGTGAACAAACAGTCAATTTACCAGAGTGACGAACGAAAAACCGG 170
consensus_7086#1      GCAGCAGCAGCCGAAAGTGAACAAACAGTCAATTTACCAGAGTGACGAACGAAAAACCGG 360
                      ************************************************************

consensus_7086#0      CAGGCGCGTGTGCTCTAAACGTTCAGAGATTCATCCAGAACCGTATACAATGGCCACCAT 230
consensus_7086#1      CAGGCGCGTGTGCTCTAAACGTTCAGAGATTCATCCAGAACCGTATACAATGGCCACCAT 420
                      ************************************************************

consensus_7086#0      TCGCATACCACGGTGGGCGGGGATCGGTGTCGGTCTGCTGGCGGTACTCCTGCTACTCGG 290
consensus_7086#1      TCGCATACCACGGTGGGCGGGGATCGGTGTCGGTCTGCTGGCGGTACTCCTGCTACTCGG 480
                      ************************************************************

consensus_7086#0      TGTGGAGGCGCAAGTTCCTGGCTTTGGCAAATGCCCCAAAGTACCGGTGGTGGAGAACTT 350
consensus_7086#1      TGTGGAGGCGCAAGTTCCTGGCTTTGGCAAATGCCCCAAAGTACCGGTGGTGGAGAACTT 540
                      ************************************************************

consensus_7086#0      CGACACGTATGCGTACCTGGGCCGCTGGTACGAGCAGGAAAAGTATCCGTTCTTCTTCGA 410
consensus_7086#1      CGACACGTATGCGTACCTGGGCCGCTGGTACGAGCAGGAAAAGTATCCGTTCTTCTTCGA 600
                      ************************************************************

consensus_7086#0      GCTGGGTGGGAAGTGTATAACGGCCGACTATTCGCTCAACCCGGACGGCACGATCGGTGT 470
consensus_7086#1      GCTGGGTGGGAAGTGTATAACGGCCGACTATTCGCTCAACCCGGACGGCACGATCGGTGT 660
                      ************************************************************

consensus_7086#0      GCTGAACACGCAGAAGAATTCCATAACGGGCAATGAGAACAGTATCGTTGGTTCTGCACG 530
consensus_7086#1      GCTGAACACGCAGAAGAATTCCATAACGGGCAATGAGAACAGTATCGTTGGGTCTGCACG 720
                      *************************************************** ********

consensus_7086#0      TATCGTTCAGTCCGCAGATTGGCGGTCAGGTTCCCGAGTGCACCATTTAACGTCGAAGCT 590
consensus_7086#1      TATCGTTCAGTCCG---------------------------------------------- 734
                      **************                                              

consensus_7086#0      CCATACTGGGTGGTCGGTACCGACTACAAGACCTTTGCCGTCGTTTACGCGTGCTCGGAT 650
consensus_7086#1      ------------------------------------------------------------
                                                                                  

consensus_7086#0      CTGCGCGGATTTATCAATGCTAAGGTAGCCATGGATTTTGACCCGTAAGCGGAATCGGAC 710
consensus_7086#1      ------------------------------------------------------------
                                                                                  

consensus_7086#0      NATTGAGACGATGAGAAAGGCGTACTCCGTGCTG 744
consensus_7086#1      ----------------------------------