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Anopheles gambiae
cluster # 7110 cluster # 7110       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7110#0 length = 1209 sequences # 6  

consensusID : consensus_7110#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1209
fasta sequence
                              [AGTACATGAAGCCGGGCCAGCGCATGGGGTTCCGCGAGGGGCGCACGAAAGCGGTCGGGAACGTGATTCAGCCGCTGTACACGCCTGGGAGCATCCAGCAGCGCTCCAAGCCGAATAAAATGCAATCGAACCGTGGTGCGATGGTGGGCGGAATGCAGACCGGGTCTGGGATGACCTGTTCCGCTAACATGCCACTATCCAAGGGGTCCAGTGCAACGGTGGACGGGGATGCAGCTGTTGCTGCTGCTGCTGCGGGAGGCATGGACAATGGCACGGCCAACAGTTCGCCGACCAGCGAGTCAACGCCCGTGCTGGACATTGGGACGGATAAGCGCAACCATCGGCCAGCGGGCGGTGGTAAGAAGCGCAACAATATGGCAGGGGCCACCGGAGCAGGGCCGAGTTTACCGCCCGCAAGCGGTAAGGTGTTATCGGCCGGTAGTTCAGGGGCGGCATCACAACAATCGGTTGCTTCGGTGGCTGCCCCTGGAGCATCATCGTCGGCCGCGTCCGGTGGGGCCGCCGTCGCCGTTGACATGAGCAAACTATCCATTGCTTCCAACTAGATAAGCGTTTAGATTTTGTTGTTGGACTGTGTGCACTGACTGACTAGTGCGGGAGCAGCAGTAAAGTGAAGTACGATTTACTGTTTTTTTTTAGGCGGGCCTGCTCGCACATCAGCGACCAGTGCACACCGGTTTTGGTTGAAAACCACCCTATCAAGGAGCTCCCCCGGGT--ACAACTCTCTTACCACCTGTTTTGACATCGTCGAGCTCGTCGTTTTTTTTTCTTGCGAGACGCGATGGCCATAGCCTCTGGCAAATGGAAATTTGCAATTTTATTCTTAATATGCACCTCTGCGAATGTACGTCAACAAAAACACGCACGCACTATCGAATCAAGTATGTAATGTTGTTCCCGTACGATCAACAATTTCTTATTTACTATATTGACATTTTCATGCAACGGAAGCGATCGGTTTTGAATTGGAATTAGTGCTAGGGGATTATGCGTATTGACGCAGAGCAACAGCATGCACTACGTACGATAACAGTGAGCTAAAAACGAAGGAAATTGACCCTTCCCGAAGCGAAATGATGAATTGTTGCAAATTTCAGAATGTTATTTTCGTTTCGCAATTGCAATTCACAACACGAGGCGACACATTTTCGACAAATAAAAATAAATTTTAATTACATTGAAAAAAAA]

[+] EMBL BX609529             [AGTACATGAAGCCGGGCCAGCGCATGGGGTTCCGCGAGGGGCGCACGAAAGCGGTCGGGAACGTGATTCAGCCGCTGTACACGCCTGGGAGCATCCAGCAGCGCTCCAAGCCGAATAAAATGCAATCGAACCGTGGTGCGATGGTGGGCGGAATGCAGACCGGGTCTGGGATGACCTGTTCCGCTAACATGCCACTATCCAAGGGGTCCAGTGCAACGGTGGACGGGGATGCAGCTGTTGCTGCTGCTGCTGCGGGAGGCATGGACAATGGCACGGCCAACAGTTCGCCGACCAGCGAGTCAACGCCCGTGCTGGACATTGGGACGGATAAGCGCAACCATCGGCCAGCGGGCGGTGGTAAGAAGCGCAACAATATGGCAGGGGCCACCGGAGCAGGGCCGAGTTTACCGCCCGCAAGCGGTAAGGTGTTATCGGCCGGTAGTTCAGGGGCGGCATCACAACAATCGGTTGCTTCGGTGGCTGCCCCTGGAGCATCATCGTCGGCCGCGTCCGGTGGGGCCGCCGTCGCCGTTGACATGAGCAAACTATCCATTGCTTCCAACTAGATAAGCGTTTAGATTTTGTTGTTGGACTGTGTGCACTGACTGACTAGTGCGGGAGCAGCAGTAAAGTGAAGTACGATTTACTGTTTTTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AGA282436            [                                                                                                                                                  GGCGGAATGCAGACCGGGTCTGGGATGACCTGTTCCGCTAACATGCCACTATCCAAGGGGTCCAGTGCAACGGTGGACGGGGATGCAGCTGTTGCTGCTGCTGCTGCGGGAGGCATGGACAATGGCACGGCCAACAGTTCGCCGACCAGCGAGTCAACGCCCGTGCTGGACATTGGGACGGATAAGCGCAACCATCGGCCAGCGGGCGGTGGTAAGAAGCGCAACAATATGGCAGGGGCCACCGGAGCAAGGCCGAGTTTACCGCCCGCAAGCGGTAAGGTGTTATCGGCCGGTAGTTCAGGGGCGGCATCACAACAATCGGTTGCTTCGGTGGCTGCCCCTGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AGA280360            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ttTTGTTGGACTGTGTGCACTGACTGACTAGTGCGGGAGCAGCACTAAAGTGAAGTACGATTTACTGTTTTTTTTTAGGCGGGCCTGCTCGCACATCAGCGACCAGTGCACACCGGTTTTGGTTGAAAACCACCCTATCAAGGAGCTCCCCCGGGT  ACAACTCTCTTACCACCTGTTTTGACATCGTCGAGCTCGTCGTTTTTTTTTCTTGCGAGACGCGATGGCCATAGCCTCTGGCACATGGAAATTTGCAATTTTATTCTTAATATGCACCTCTGCGAATGTACGTCAACAAAAACACGCACGCACTATCGAATCAAGTATGTAATGTTGTTCCCGTACGATCAACAATTTCTTATTTACTATATT                                                                                                                                                                                                                                                                  ]
[-] EMBL AGA282061            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTCCCCCGGGT  ACAACTCTCTTACCACCTGTTTTGACATCGTCGAGCTCGTCGTTTTTTTTTCTTGCGAGACGCGATGGCCATAGCCTCTGGCAAATGGAAATTTGCAATTTTATTCTTAATATGCACCTCTGCGAATGTACGTCAACAAAAACACGCACGCACTATCGAATCAAGTATGTAATGTTGTTCCCGTACGATCAACAATTTCTTATTTACTATATTGACATTTTCATGCAACGGAAGCGATCGGTTTTGAATTGGAATTAGTGCTAGGGGATTATGCGTATTGACGCAGAGCAACAGCATGCACTACGTACGATAACAGTGAGCTAAAAACGAAGG                                                                                                                                          ]
[+] EMBL BM580358             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgCCCACGCGTCCGCAACTCTCTTACCACCTGTTTTGACATCGTCGAGCTCGTCGTTTTTTTTTCTTGCGAGACGCGATGGCCATAGCCTCTGGCAAATGGAAATTTGCAATTTTATTCTTAATATGCACCTCTGCGAATGTACGTCAACAAAAACACGCACGCACTATCGAATCAAGTATGTAATGTTGTTCCCGTACGATCAACAATTTCTTATTTACTATATTGACATTTTCATGCAACGGAAGCGATCGGTTTTGAATTGGAATTAGTGCTAGGGGATTATGCGTATTGACGCAGAGCAACAGCATGCACTACGTACGATAACAGTGAGCTAAAAACGAAGGAAATTGACCCTTCCCGAAGCGAAATGATGAATTGTTGCAAATTTCAGAATGTTATTTTCGTTTCGCAATTGCAATTCACAACACGAGGCGACACATTTTCGACAAATAAAAATAAATTTTAATT              ]
[-] EMBL AGA280810            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAACACGCACGCACTATCGAATCAAGTATGTAATGTTGTTCCCGTACGATCAACAATTTCTTATTTACTATATTGACATTTTCATGCAACGGAAGCGATCGGTTTTGAATTGGAATTAGTGCTAGGGGATTATGCGTATTGACGCAGAGCAACAGCATGCACTACGTACGATAACAGTGAGCTAAAAACGAAGGAAATTGACCCTTCCCGAAGCGAAATGATGAATTGTTGCAAATTTCAGAATGTTATTTTCGTTTCGCAATTGCAATTCACAACACGAGGCGACACATTTTCGACAAATAAAAATAAATTTTAATTACATTGAAAAAAAA]


>consensus_7110#0 AGTACATGAAGCCGGGCCAGCGCATGGGGTTCCGCGAGGGGCGCACGAAAGCGGTCGGGA ACGTGATTCAGCCGCTGTACACGCCTGGGAGCATCCAGCAGCGCTCCAAGCCGAATAAAA TGCAATCGAACCGTGGTGCGATGGTGGGCGGAATGCAGACCGGGTCTGGGATGACCTGTT CCGCTAACATGCCACTATCCAAGGGGTCCAGTGCAACGGTGGACGGGGATGCAGCTGTTG CTGCTGCTGCTGCGGGAGGCATGGACAATGGCACGGCCAACAGTTCGCCGACCAGCGAGT CAACGCCCGTGCTGGACATTGGGACGGATAAGCGCAACCATCGGCCAGCGGGCGGTGGTA AGAAGCGCAACAATATGGCAGGGGCCACCGGAGCAGGGCCGAGTTTACCGCCCGCAAGCG GTAAGGTGTTATCGGCCGGTAGTTCAGGGGCGGCATCACAACAATCGGTTGCTTCGGTGG CTGCCCCTGGAGCATCATCGTCGGCCGCGTCCGGTGGGGCCGCCGTCGCCGTTGACATGA GCAAACTATCCATTGCTTCCAACTAGATAAGCGTTTAGATTTTGTTGTTGGACTGTGTGC ACTGACTGACTAGTGCGGGAGCAGCAGTAAAGTGAAGTACGATTTACTGTTTTTTTTTAG GCGGGCCTGCTCGCACATCAGCGACCAGTGCACACCGGTTTTGGTTGAAAACCACCCTAT CAAGGAGCTCCCCCGGGTACAACTCTCTTACCACCTGTTTTGACATCGTCGAGCTCGTCG TTTTTTTTTCTTGCGAGACGCGATGGCCATAGCCTCTGGCAAATGGAAATTTGCAATTTT ATTCTTAATATGCACCTCTGCGAATGTACGTCAACAAAAACACGCACGCACTATCGAATC AAGTATGTAATGTTGTTCCCGTACGATCAACAATTTCTTATTTACTATATTGACATTTTC ATGCAACGGAAGCGATCGGTTTTGAATTGGAATTAGTGCTAGGGGATTATGCGTATTGAC GCAGAGCAACAGCATGCACTACGTACGATAACAGTGAGCTAAAAACGAAGGAAATTGACC CTTCCCGAAGCGAAATGATGAATTGTTGCAAATTTCAGAATGTTATTTTCGTTTCGCAAT TGCAATTCACAACACGAGGCGACACATTTTCGACAAATAAAAATAAATTTTAATTACATT GAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)