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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7139#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 960 fasta sequence
[GTGCTTTCCAATAAGTGTCACTGGCTCCCGACAGGGCTCAGGCGTTTTCGGTAGAGAATGTTTGCTATCTCTTCTACGAAGAGGGTAGCACTGGTTTTGTGCCGTAGTTTGTGCTTCTTTTGTTTTCATCTCTTGAATGTTGCTTTTTAACTAGTAAAGCAACGTTTTAACGACCTTTTTAAGTGCCCGATATACACTCACACACACCAGCGTATAGTGGAATGTGCTTGTATGCTGTGTTTTAACCAAAAGCCAACAGAACAAGTGGAAAGGGGAAAAGATCGCGATCGTTCCTGCCTGTTGACCATGTACATTAAATCTGGCCACCGTTTTCTCAGCGATAAAGGTCAAATCATTTTCCCCGGACCACCGACCCGTTCGCCTGCGCTGTACTATCAGACGAGCACCGTGCCCGCGACCACAACCACCACGACGACCACGATGGCTACCCCACCCGGCGGTGTTAGTGATGAGAATGGGAACTACATAGTGCCCGACATGTGGCAGAGCAAATCGACTACCGGATCGGACATGCTGTCGGATAAGATACAGATGTTCTACATCTACATCACCGTCACGATTACGTCCGTCTTCATTATAGTTGTGCTCGGGATTTTCGGCTACATGTGCTACAAAAGGAAAGGATTCCAAAACATCGATGGCCCACAGTCGCCCATCGAAACTACGCGGCGAAGAAGCAGCACCCACCGATCCACTCGAANGTACTCGCGTAACATGTCCAAGGAGANGGAAGCCGCCGCTTCCGCTACTACCACCGANGACAACCCGGGACAAACGTTGCTGCGGTAAACCAGGCGATACTCACAGGAAGCGATTTTTCTATTTGATCATATTTTTACAAACAACGGTCGCCTTTTTCGCACAGCAGTTTCGTGCGATGTAAATTATCTAGTTGAGGGACAAATTATACTACTCTAGACGATGCAATAAATTAGTGAT]
[+] EMBL BX623280 [GTGCTTTCCAATAAGTGTCACTGGCTCCCGACAGGGCTCAGGCGTTTTCGGTAGAGAATGTTTGCTATCTCTTCTACGAAGAGGGTAGCACTGGTTTTGTGCCGTAGTTTGTGCTTCTTTTGTTTTCATCTCTTGAATGTTGCTTTTTAACTAGTAAAGCAACGTTTTAACGACCTTTTTAAGTGCCCGATATACACTCACACACACCAGCGTATAGTGGAATGTGCTTGTATGCTGTGTTTTAACCAAAAGCCAACAGAACAAGTGGAAAGGGGAAAAGATCGCGATCGTTCCTGCCTGTTGACCATGTACATTAAATCTGGCCACCGTTTTCTCAGCGATAAAGGTCAAATCATTTTCCCCGGACCACCGACCCGTTCGCCTGCGCTGTACTATCAGACGAGCACCGTGCCCGCGACCACAACCACCACGACGACCACGATGGCTACCCCACCCGGCGGTGTTAGTGATGAGAATGGGAACTACATAGTGCCCGACATGTGGCAGAGCAAATCGACTACCGGATCGGACATGCTGTCGGATAAGATACAGATGTTCTACATCTACATCACCGTCACGATTACGTCCGTCTTCATTATAGTTGTGCTCGGGATTTTCGGCTACATGTGCTACAAAAGGAAAGGATTCCAAAACATCGATGGCCCACAGTCGCCCATCGAAACTACGCGGCGAAGAAGCAGCACCCACCGATCCACTCGAANGTACTCGCGTAACATGTCCAAGGAGANGGAAGCCGCCGCTTCCGCTACTACCACCGANGACAACCCGGGACAAACGTTGCTGCGGTAAACCAGG ]
[+] EMBL BX624989 [ ATAAGTGTCACTGGCTCCCGACAGGGCTCAGGCGTTTTCGGTAGAGAATGTTTGCTATCTCTTCTACGAAGAGGGTAGCACTGGTTTTGTGCCGTAGTTTGTGCTTCTTTTGTTTTCATCTCTTGAATGTTGCTTTTTAACTAGTAAAGCAACGTTTTAACGACCTTTTTAAGTGCCCGATATACACTCACACACACCAGCGTATAGTGGAATGTGCTTGTATGCTGTGTTTTAACCAAAAGCCAACAGAACAAGTGGAAAGGGGAAAAGATCGCGATCGTTCCTGCCTGTTGACCATGTACATTAAATCTGGCCACCGTTTTCTCAGCGATAAAGGTCAAATCATTTTCCCCGGACCACCGACCCGTTCGCCTGCGCTGTACTATCAGACGAGCACCGTGCCCGCGACCACAACCACCACGACGACCACGATGGCTACCCCACCCGGCGGTGTTAGTGATGAGAATGGGAACTACATAGTGCCCGACATGTGGCAGAGCAAATCGACTACCG ]
[+] EMBL BM628347 [ TGTGCTTCTTTTGGTTTCATCTCTTGCATGTTGCTTTTTAAGTAGTAAAGCAACGATTTAACGACCTTTTTAAGTGCCCGATATACACTCACACACACCATCGTATAGTGGAATGTGCTTTTATGCTGGGTTTTAACCTGAAGCCAACAGAACAAGTGGAAAGGGGAAAAGATCGCGATCGTTCCTGCCTGTTGACCATGTACATTAAATCTGGCCACCGTTTTCTCAGCGATAAAGGTCAAATCATTTTCCCCGGACCACCGACCCGATCGCCTGCGCTGTACTATCAGATGAGCACCGTGACCGCGACCACGACCACCACG ]
[+] EMBL BX612341 [ CAGACGAGCACCGTGCCCGCGACCACAACCACCACGACGACCACGATGGCGACCCCACCCGGCGGGGTTAGTGATGAGAATGGGAACTACATAGGGCCCGACATGTGGCAGAGCAAATCGACTACCGGATCGGACATGCTGTCGGATAAGAAACAGATGTTCTACATCTACATCACCGTCACGATTACGTCCGTCTTCATTATAGTTGTGCTCGGGATTTTCGGCTACATGTGCTACAAAAGGAAAGGAATCCAAAACATCGATGGCCCACAGT ]
[+] EMBL BX610130 [ GCACCGTGCCCGCGACCACAACCACCACGACGACCACGATGGCTACCCCACCCGGCGGTGTTAGTGATGAGAATGGGAACTACATAGTGCCCGACATGTGGCAGAGCAAATCGACTACCGGATCGGACATGCTGTCGGATAAGATACAGATGTTCTACATCTACATCACCGTCACGATTACGTCCGTCTTCATTATAGTTGTGCTCGGGATTTTCGGCTACATGTGCTACAAAAGGAAAGGATTCCAAAACATCGATGGCCCACAGTCGCCCATCGAAACTACGCGGCGAAGAAGCAGCACCCACCGATCCACTCGAAGGTACTCGCGTAACATGTCCAAGGAGAGGGAAGCCGCCGCTTCCGCTACTACCACCGAGGACAACCCGGGACAAACGTTGCTGCGGTAAACCAGGCGATACTCACAGGAAGCGATTTTTCTATTTGATCATATTTTTACAAACAACGGTCGCCTTTTTCGCACAGCAGTTTCGTGCGATGTAAATTATCTAGTTGAGGGACAAATTATACTACTCTAGACGATGCAATAAATTAGTGAT]
consensusID : consensus_7139#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 691 fasta sequence
[CCGGGTGATAGTGTTCGGAAGCGGAAACACTGCGGGTTTCGTTTTAGTGCTTTCCAATAAGTATCACTGGCTCCCGACAGGGCTCAGGCGTTTTCGGTAGAGAATGTTTGCTTTCTCTTCTACGAAGAGGGTAGCACTGGTTTTGTGCCGTAGTTTGTTTTCATCTCTTGCGTGTTGCTTTTTAACTAGTAAAGCGACGTTTTAACGACCTCTTCAAGTGCCCGATACACAAACACATACACACACCAGCGTATAGTGGAATGTGCTTTTATGCTGTGTTTTAACCAAAAGCCAACAGAACAAGTGGAAAGGGGAAAAGATCGCGATCGTTCCTGTCAGTTGACCATGTACATTAAATCTGGCCACCGTTTTCTCAGCGATAAAGGTCAAATCATTTTCCCCGGACCACCGACCCGTTCGCCTGCGCTGTACTATCAGACGAGCACCGTGCCCGCGACCACAACCAGCACGACGACCACGATGGCTACCCCGCCCGGAGGTGTTAGTGATGAGAATGGAAACTACATAGTACCCGACATGTGGCAGAGCAAATCGACTACCGGATCGGACATGCTGTCGGATAAGATACAGATGTTCTACATCTACATCACCGTCACGATTACGTCCGTCTTCATTATAGTTGTGCTCGGGATTTTCGGCTACATGTGCTACAAGAGGAAAGGATTCCAAA]
[+] EMBL BM631193 [CCGGGTGATAGTGTTCGGAAGCGGAAACACTGCGGGTTTCGTTTTAGTGCTTTCCAATAAGTATCACTGGCTCCCGACAGGGCTCAGGCGTTTTCGGTAGAGAATGTTTGCTTTCTCTTCTACGAAGAGGGTAGCACTGGTTTTGTGCCGTAGTTTGTTTTCATCTCTTGCGTGTTGCTTTTTAACTAGTAAAGCGACGTTTTAACGACCTCTTCAAGTGCCCGATACACAAACACATACACACACCAGCGTATAGTGGAATGTGCTTTTATGCTGTGTTTTAACCAAAAGCCAACAGAACAAGTGGAAAGGGGAAAAGATCGCGATCGTTCCTGTCAGTTGACCATGTACATTAAATCTGGCCACCGTTTTCTCAGCGATAAAGGTCAAATCATTTTCCCCGGACCACCGACCCGTTCGCCTGCGCTGTACTATCAGACGAGCACCGTGCCCGCGACCACAACCAGCACGACGACCACGATGGCTACCCCGCCCGGAGGTGTTAGTGATGAGAATGGAAACTACATAGTACCCGACATGTGGCAGAGCAAATCGACTACCGGATCGGACATGCTGTCGGATAAGATACAGATGTTCTACATCTACATCACCGTCACGATTACGTCCGTCTTCATTATAGTTGTGCTCGGGATTTTCGGCTACATGTGCTACAAGAGGAAAGGATTCCAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7139#0 ----------------------------------------------GTGCTTTCCAATAA 14
consensus_7139#1 CCGGGTGATAGTGTTCGGAAGCGGAAACACTGCGGGTTTCGTTTTAGTGCTTTCCAATAA 60
**************
consensus_7139#0 GTGTCACTGGCTCCCGACAGGGCTCAGGCGTTTTCGGTAGAGAATGTTTGCTATCTCTTC 74
consensus_7139#1 GTATCACTGGCTCCCGACAGGGCTCAGGCGTTTTCGGTAGAGAATGTTTGCTTTCTCTTC 120
** ************************************************* *******
consensus_7139#0 TACGAAGAGGGTAGCACTGGTTTTGTGCCGTAGTTTGTGCTTCTTTTGTTTTCATCTCTT 134
consensus_7139#1 TACGAAGAGGGTAGCACTGGTTTTGTGCCGTAGTT-----------TGTTTTCATCTCTT 169
*********************************** **************
consensus_7139#0 GAATGTTGCTTTTTAACTAGTAAAGCAACGTTTTAACGACCTTTTTAAGTGCCCGATATA 194
consensus_7139#1 GCGTGTTGCTTTTTAACTAGTAAAGCGACGTTTTAACGACCTCTTCAAGTGCCCGATACA 229
* *********************** *************** ** ************ *
consensus_7139#0 CA----CTCACACACACCAGCGTATAGTGGAATGTGCTTGTATGCTGTGTTTTAACCAAA 250
consensus_7139#1 CAAACACATACACACACCAGCGTATAGTGGAATGTGCTTTTATGCTGTGTTTTAACCAAA 289
** * ****************************** ********************
consensus_7139#0 AGCCAACAGAACAAGTGGAAAGGGGAAAAGATCGCGATCGTTCCTGCCTGTTGACCATGT 310
consensus_7139#1 AGCCAACAGAACAAGTGGAAAGGGGAAAAGATCGCGATCGTTCCTGTCAGTTGACCATGT 349
********************************************** * ***********
consensus_7139#0 ACATTAAATCTGGCCACCGTTTTCTCAGCGATAAAGGTCAAATCATTTTCCCCGGACCAC 370
consensus_7139#1 ACATTAAATCTGGCCACCGTTTTCTCAGCGATAAAGGTCAAATCATTTTCCCCGGACCAC 409
************************************************************
consensus_7139#0 CGACCCGTTCGCCTGCGCTGTACTATCAGACGAGCACCGTGCCCGCGACCACAACCACCA 430
consensus_7139#1 CGACCCGTTCGCCTGCGCTGTACTATCAGACGAGCACCGTGCCCGCGACCACAACCAGCA 469
********************************************************* **
consensus_7139#0 CGACGACCACGATGGCTACCCCACCCGGCGGTGTTAGTGATGAGAATGGGAACTACATAG 490
consensus_7139#1 CGACGACCACGATGGCTACCCCGCCCGGAGGTGTTAGTGATGAGAATGGAAACTACATAG 529
********************** ***** ******************** **********
consensus_7139#0 TGCCCGACATGTGGCAGAGCAAATCGACTACCGGATCGGACATGCTGTCGGATAAGATAC 550
consensus_7139#1 TACCCGACATGTGGCAGAGCAAATCGACTACCGGATCGGACATGCTGTCGGATAAGATAC 589
* **********************************************************
consensus_7139#0 AGATGTTCTACATCTACATCACCGTCACGATTACGTCCGTCTTCATTATAGTTGTGCTCG 610
consensus_7139#1 AGATGTTCTACATCTACATCACCGTCACGATTACGTCCGTCTTCATTATAGTTGTGCTCG 649
************************************************************
consensus_7139#0 GGATTTTCGGCTACATGTGCTACAAAAGGAAAGGATTCCAAAACATCGATGGCCCACAGT 670
consensus_7139#1 GGATTTTCGGCTACATGTGCTACAAGAGGAAAGGATTCCAAA------------------ 691
************************* ****************
consensus_7139#0 CGCCCATCGAAACTACGCGGCGAAGAAGCAGCACCCACCGATCCACTCGAANGTACTCGC 730
consensus_7139#1 ------------------------------------------------------------
consensus_7139#0 GTAACATGTCCAAGGAGANGGAAGCCGCCGCTTCCGCTACTACCACCGANGACAACCCGG 790
consensus_7139#1 ------------------------------------------------------------
consensus_7139#0 GACAAACGTTGCTGCGGTAAACCAGGCGATACTCACAGGAAGCGATTTTTCTATTTGATC 850
consensus_7139#1 ------------------------------------------------------------
consensus_7139#0 ATATTTTTACAAACAACGGTCGCCTTTTTCGCACAGCAGTTTCGTGCGATGTAAATTATC 910
consensus_7139#1 ------------------------------------------------------------
consensus_7139#0 TAGTTGAGGGACAAATTATACTACTCTAGACGATGCAATAAATTAGTGAT 960
consensus_7139#1 --------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||