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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7159#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 833 fasta sequence
[CAGATCGCCACGAGGAGGTAACATCGCGGAAACACAATTTCACTCCGAAACAGTGAAAAATCACCTCCTTCTCTTCACATCATCACCACGCAACGAGGCGCGAAGTGGTCCAAAACTCCCCCCGAACCCATTGACAGCGCAAGTAAAGCGGAAAGAAACGACAAACCATGGAAGGAGAGGCGCGTTTTGTGATGGATCGGCCGAACGATCTCGAGGAGCAGCTAGCGCCCGGCTACCAGAAGGCTTTTACCTTCAACCTGCCGACGGTAACGCGACCGATGCTGTGGGACTACATGCTCCGCCTGATGAAGGCCGTGTCCGGCAACGATAGTCTCCTGAAGGCACTACAATCGTGCGCGGAAAACAATCCCGAGTTCGGGGACGACTCCGTCGGCTGTGTGCAGCTGCGGCGCGAAGACACCTACTGCACGGTGAAGGGCCAGATCCACACGATCGGCCCGTGCGACGATGGGGAAAACATGGAAATCAAAATCTACCAGCTGACGGTCACGATCGACGAGGAAAACCACAAGGTGGAGTCGGTCGCGTGCAGCGACTGTGCCGAGCTCGGGTTTTGCCA-GCACAC-GGTCAGCTTGCTGCTGTGGCTGCACACGCAGGACCA-GCCCGGCACGCACCAGGACG-TGGAGTGC-TTCTTCC-GCACGCCGCTCGCC-ACCGA--GCTGGA-GCAGAT-CCGGCGAAGCCCGCCCGGTCCAACCAGAACCAAAACGAAAANAGTTCATCCGGGAAGATNCGNGCCACGGCTTGCAGACCGGAAGGACATTCGACTGGTCCGATAGCGGNGAACTCTTCGTCGGGGAAANAAGAAGTTTCTCAGC]
[+] EMBL BX467659 [CAGATCGCCACGAGGAGGTAACATCGCGGAAACACAATTTCACTCCGAAACAGTGAAAAATCACCTCCTTCTCTTCACATCATCACCACGCAACGAGGCGCGAAGTGGTCCAAAACTCCCCCCGAACCCATTGACAGCGCAAGTAAAGCGGAAAGAAACGACAAACCATGGAAGGAGAGGCGCGTTTTGTGATGGATCGGCCGAACGATCTCGAGGAGCAGCTAGCGCCCGGCTACCAGAAGGCTTTTACCTTCAACCTGCCGACGGTAACGCGACCGATGCTGTGGGACTACATGCTCCGCCTGATGAAGGCCGTGTCCGGCAACGATAGTCTCCTGAAGGCACTACAATCGTGCGCGGAAAACAATCCCGAGTTCGGGGACGACTCCGTCGGCTGTGTGCAGCTGCGGCGCGAAGACACCTACTGCACGGTGAAGGGCCAGATCCACACGATCGGCCCGTGCGACGATGGGGAAAACATGGAAATCAAAATCTACCAGCTGACGGTCACGATCGACGAGGAAAACCACAAGGTGGAGTCGGTCGCGTGCAGCGACTGTGCCGAGCTCGGGTTTTGCCAGGCACACGGGTCAGCTTGCTGCTGTGGCTGCACACGCAGGACCANGCCCGGCACGCACAGGGACGTTGGAGTGCTTTCTTCCGGNACGCGGTTCGCCAACCGAAGGCTGGAGGCAGAT CCGGCGAAGCCCGCCCGGTCCAACCAGAACCAAAACGAAAANAGTTCATCCGGGAAGATNCGNGCCACGGCTTGCAGACCGGAAGGACATTCGACTGGTCCGATAGCGGNGAACTCTTCGTCGGGGAAANAAGAAGTTTCTCAGC]
[+] EMBL BM632909 [ ccgAAATCACCTCCTTCTCTTCACATCATCACCACGCAACGAGGCGCGAAGTGGTCCAAAACTCCCCCCGAACCCATTGACAGCGCAAGTAAAGCGGAAAGAAACGACAAACCATGGAAGGAGAGGCGCGTTTTGTGATGGATCGGCCGAACGATCTCGAGGAGCAGCTAGCGCCCGGCTACCAGAAGGCTTTTACCTTCAACCTGCCGACGGTAACGCGACCGATGCTGTGGGACTACATGCTCCGCCTGATGAAGGCCGTGTCCGGCAACGATAGTCTCCTGAAGGCACTACAATCGTGCGCGGAAAACAATCCCGAGTTCGGGGACGACTCCGTCGGCTGTGTGCAGCTGCGGCGCGAAGACACCTACTGCACGGTGAAGGGCCAGATCCACACGATCGGCCCGTGCGACGATGGGGAAAACATGGAAATCAAAATCTACCAGCTGACGGTCACGATCGACGAGGAAAACCACAAGGTGGAGTCGGTCGCGTGCAGCGACTGTGCCGAGCTCGGGTTTTGCCA GCACAC GGTCAGCTTGCTGCTGTGGCTGCACACGCAGGACCA GCCCGGCACGCACCAGGACG TGGAGTGC TTCTTCC GCACGCCGCTCGCC ACCGA GCTGGA GCAGATCCCGGCGAAG CCGCCg ]
[+] EMBL BX621840 [ AGGCGCGAAGTGGTCCAAAACTCCCCCCGAACCCATTGACAGCGCAAGTAAAGCGGAAAGAAACGACAAACCATGGAAGGAGAGGCGCGTTTTGTGATGGATCGGCCGAACGATCTCGAGGAGCAGCTAGCGCCCGGCTACCAGAAGGCTTTTACCTTCAACCTGCCGACGGTAACGCGACCGATGCTGTGGGACTACATGCTCCGCCTGATGAAGGCCGTGTCCGGCAACGATAGTCTCCTGAAGGCACTACAATCGTGCGCGGAAAACAATCCCGAGTTCGGGGACGACTCCGTCGGCTGTGTGCAGCTGCGGCGCGAAGACACCTACTGCACGGTGAAGGGCCAGATCCACACGATCGGCCCGTGCGACGATGGGGAAAACATGGAAATCAAAATCTACCAGCTGACGGTCACGATCGACGAGGAAAACCACAAGGTGGAGTCGGTCGCGTGCAGCGACTGTGCCGAGCTCGGGTTTTGCCA GCACAC GGTCAGCTTGCTGCTGTGGCTGCACACGCAGGACCA GCCCGGCACGCACCAGGACG TGGAGTGC TTCTTCC GCACGCCGCTCGCC ACCGA GCT ]
[+] EMBL BX621846 [ CGAAGTGGTCCAAAACTCCCCCCGAACCCATTGACAGCGCAAGTAAAGCGGAAAGAAACGACAAACCATGGAAGGAGAGGCGCGTTTTGTGATGGATCGGCCGAACGATCTCGAGGAGCAGCTAGCGCCCGGCTACCAGAAGGCTTTTACCTTCAACCTGCCGACGGTAACGCGACCGATGCTGTGGGACTACATGCTCCGCCTGATGAAGGCCGTGTCCGGCAACGATAGTCTCCTGAAGGCACTACAATCGTGCGCGGAAAACAATCCCGAGTTCGGGGACGACTCCGTCGGCTGTGTGCAGCTGCGGCGCGAAGACACCTACTGCACGGTGAAGGGCCAGATCCACACGATCGGCCCGTGCGACGATGGGGAAAACATGGAAATCAAAATCTACCAGCTGACGGTCACGATCGACGAGGAAAACCACAAGGTGGAGTCGGTCGCGTGCAGCGACTGTGCCGAGCTCGGGTTTTGCCA GCACAC GGTCAGCTTGCTGCTGTGGCTGCACACGCAGGACCA GCCCGGCACGCACCAGGACG TGGAGTGC TTCTTCC GCACGCCGCTCGCC ACCGA GCTGGA GCAGAT CCcgg ]
consensusID : consensus_7159#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 669 fasta sequence
[CCGGTGGGTGATAGGTAAACAATCGCGGAAACACAATTTCACTCCGAAACAGTGAAAAATCACCTCCTTCTCTTCACATCATCACCACGCAACGAGGCGCGAAGTGGTCCAAAACTCCCCCCGAACCCATTGACAGCGCAAGTAAAGCGGAAAGAAACGACAAACCATGGAAGGAGAGGCGCGTTTTGTGATGGATCGGCCGAACGATCTCGAGGAGCAGCTAGCGCCCGGCTACCAGAAGGCTTTTACCTTCAACCTGCCGACGGTAACGCGACCGATGCTGTGGGACTACATGCGCCTGATGAAGGCCGTGTCCGGCAACGATAGTCTCCTGAAGGCACTACAATCGTGCGCGGAAAACAATCCCGAGTTCGGGGACGACTCCGTCGGCTGTGTGCAGCTGCGGCGCGAAGACACCTACTGCACGGTGAAGGGCCAGATCCACACGATCGGCCCGTGCGACGATGGGGAAAACATGGAAATCAAAATCTACCAGCTGACGGTCACGATCGACGAGGAAAACCACAAGGTGGAGTCGGTCGCGTGCAGCGACTGTGCCGAGCTCGGGTTTTGCCAGCACACGGTCAGCTTGCTGCTGTGGCTGCACACGCAGGACCAGCCCGGCACGCACCAAGGACGTGGAGTGCTTCTTCCGCACGCCGCTCGCCA]
[+] EMBL BM610309 [CCGGTGGGTGATAGGTAAACAATCGCGGAAACACAATTTCACTCCGAAACAGTGAAAAATCACCTCCTTCTCTTCACATCATCACCACGCAACGAGGCGCGAAGTGGTCCAAAACTCCCCCCGAACCCATTGACAGCGCAAGTAAAGCGGAAAGAAACGACAAACCATGGAAGGAGAGGCGCGTTTTGTGATGGATCGGCCGAACGATCTCGAGGAGCAGCTAGCGCCCGGCTACCAGAAGGCTTTTACCTTCAACCTGCCGACGGTAACGCGACCGATGCTGTGGGACTACATGCGCCTGATGAAGGCCGTGTCCGGCAACGATAGTCTCCTGAAGGCACTACAATCGTGCGCGGAAAACAATCCCGAGTTCGGGGACGACTCCGTCGGCTGTGTGCAGCTGCGGCGCGAAGACACCTACTGCACGGTGAAGGGCCAGATCCACACGATCGGCCCGTGCGACGATGGGGAAAACATGGAAATCAAAATCTACCAGCTGACGGTCACGATCGACGAGGAAAACCACAAGGTGGAGTCGGTCGCGTGCAGCGACTGTGCCGAGCTCGGGTTTTGCCAGCACACGGTCAGCTTGCTGCTGTGGCTGCACACGCAGGACCAGCCCGGCACGCACCAAGGACGTGGAGTGCTTCTTCCGCACGCCGCTCGCCA]
consensusID : consensus_7159#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence
[ATCGCCCGAGGTNANCCGATTGATGCAGTGACAGCAAAGCAAAGCAAAAAAAAAAATGTCATCCGTTTTTATTTTCCTACAAAAAATCACTTCTAACCCAAATCGATTCCCCTTTCCAGACAATCGTGCGCGGAAAACAATCCCGAGTTCGGGGACGACTCCGTCGGCTGTGTGCAGCTGCGGCGCGAAGACACCTACTGCACGGTGAAGGGCCAGATCCACACGATCGGCCCGTGCGACTGATGGGGAAAACATGGAAATCAAAATCTACCAGCTGACGGTCACGATCGACGAGGAAAACCACAAGGTGGAGTCGGTCGCGTGCAGCGACTGTGCCGAGCTCGGGTTATATGCCAGCACACGGTCAGCTTGCTGCTGTGGCTGCACACGCAGGACCAGACCGGCACGCACCAGGACGTGGAGTGCTTCTTCCGCACGCCGCTCGCCACCGAGCTGGAGCAGATCCCGGCGAAGCCGCCGGTCAACAAAACCAAAACGAAAAAC]
[+] EMBL AL934492 [ATCGCCCGAGGTNANCCGATTGATGCAGTGACAGCAAAGCAAAGCAAAAAAAAAAATGTCATCCGTTTTTATTTTCCTACAAAAAATCACTTCTAACCCAAATCGATTCCCCTTTCCAGACAATCGTGCGCGGAAAACAATCCCGAGTTCGGGGACGACTCCGTCGGCTGTGTGCAGCTGCGGCGCGAAGACACCTACTGCACGGTGAAGGGCCAGATCCACACGATCGGCCCGTGCGACTGATGGGGAAAACATGGAAATCAAAATCTACCAGCTGACGGTCACGATCGACGAGGAAAACCACAAGGTGGAGTCGGTCGCGTGCAGCGACTGTGCCGAGCTCGGGTTATATGCCAGCACACGGTCAGCTTGCTGCTGTGGCTGCACACGCAGGACCAGACCGGCACGCACCAGGACGTGGAGTGCTTCTTCCGCACGCCGCTCGCCACCGAGCTGGAGCAGATCCCGGCGAAGCCGCCGGTCAACAAAACCAAAACGAAAAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7159#0 -CAGATCGCCACGAGGAGGTAACATCGCGGAAACACAATTTCACTCCGAAACAGTGAAAA 59
consensus_7159#1 CCGGTGGGTGATAGGTAAACA--ATCGCGGAAACACAATTTCACTCCGAAACAGTGAAAA 58
consensus_7159#2 ------------------------------------------------------------
consensus_7159#0 ATCACCTCCTTCTCTTCACATCATCACCACGCAACGAGGCGCGAAGTGGTCCAAAACTCC 119
consensus_7159#1 ATCACCTCCTTCTCTTCACATCATCACCACGCAACGAGGCGCGAAGTGGTCCAAAACTCC 118
consensus_7159#2 ------------------------------------------------------------
consensus_7159#0 CCCCGAACCCATTGACAGCGCAAGTAAAGCGGAAAGAAACGACAAACCATGGAAGGAGAG 179
consensus_7159#1 CCCCGAACCCATTGACAGCGCAAGTAAAGCGGAAAGAAACGACAAACCATGGAAGGAGAG 178
consensus_7159#2 ------------------------------------------------------------
consensus_7159#0 GCGCGTTTTGTGATGGATCGGCCGAACGATCTCGAGGAGCAGCTAGCGCCCGGCTACCAG 239
consensus_7159#1 GCGCGTTTTGTGATGGATCGGCCGAACGATCTCGAGGAGCAGCTAGCGCCCGGCTACCAG 238
consensus_7159#2 ------------------------------------------ATCGCCCGAGGTNANCCG 18
* ** * ** * * *
consensus_7159#0 AAGGCTTTTACCTTCAACCTGCCGACGGTAACGCGACCGATGCTGTGGGACTACATGCTC 299
consensus_7159#1 AAGGCTTTTACCTTCAACCTGCCGACGGTAACGCGACCGATGCTGTGGGACTACATG--- 295
consensus_7159#2 ATTGATGC-AGTGACAGCAAAGCAA-AGCAAAAAAAAAAATGTCATCCGTTTTTATT--- 73
* * * * ** * * * * ** * *** * * * **
consensus_7159#0 CGCCTGATGAAGGCCGTGTCCGGCAACGATAGTCTCCTGAAGGCACTACAATCGTGCGCG 359
consensus_7159#1 CGCCTGATGAAGGCCGTGTCCGGCAACGATAGTCTCCTGAAGGCACTACAATCGTGCGCG 355
consensus_7159#2 TTCCTACAAAAAATCACTTCTAACCCAAATCGATTCCCCTTTCCAG-ACAATCGTGCGCG 132
*** ** * ** * ** * *** ** *************
consensus_7159#0 GAAAACAATCCCGAGTTCGGGGACGACTCCGTCGGCTGTGTGCAGCTGCGGCGCGAAGAC 419
consensus_7159#1 GAAAACAATCCCGAGTTCGGGGACGACTCCGTCGGCTGTGTGCAGCTGCGGCGCGAAGAC 415
consensus_7159#2 GAAAACAATCCCGAGTTCGGGGACGACTCCGTCGGCTGTGTGCAGCTGCGGCGCGAAGAC 192
************************************************************
consensus_7159#0 ACCTACTGCACGGTGAAGGGCCAGATCCACACGATCGGCCCGTGCGAC-GATGGGGAAAA 478
consensus_7159#1 ACCTACTGCACGGTGAAGGGCCAGATCCACACGATCGGCCCGTGCGAC-GATGGGGAAAA 474
consensus_7159#2 ACCTACTGCACGGTGAAGGGCCAGATCCACACGATCGGCCCGTGCGACTGATGGGGAAAA 252
************************************************ ***********
consensus_7159#0 CATGGAAATCAAAATCTACCAGCTGACGGTCACGATCGACGAGGAAAACCACAAGGTGGA 538
consensus_7159#1 CATGGAAATCAAAATCTACCAGCTGACGGTCACGATCGACGAGGAAAACCACAAGGTGGA 534
consensus_7159#2 CATGGAAATCAAAATCTACCAGCTGACGGTCACGATCGACGAGGAAAACCACAAGGTGGA 312
************************************************************
consensus_7159#0 GTCGGTCGCGTGCAGCGACTGTGCCGAGCTCGGGTTTT--GCCAGCACACGGTCAGCTTG 596
consensus_7159#1 GTCGGTCGCGTGCAGCGACTGTGCCGAGCTCGGGTTTT--GCCAGCACACGGTCAGCTTG 592
consensus_7159#2 GTCGGTCGCGTGCAGCGACTGTGCCGAGCTCGGGTTATATGCCAGCACACGGTCAGCTTG 372
************************************ * ********************
consensus_7159#0 CTGCTGTGGCTGCACACGCAGGACCAGCCCGGCACGCACCA-GGACGTGGAGTGCTTCTT 655
consensus_7159#1 CTGCTGTGGCTGCACACGCAGGACCAGCCCGGCACGCACCAAGGACGTGGAGTGCTTCTT 652
consensus_7159#2 CTGCTGTGGCTGCACACGCAGGACCAGACCGGCACGCACCA-GGACGTGGAGTGCTTCTT 431
*************************** ************* ******************
consensus_7159#0 CCGCACGCCGCTCGCCACCGAGCTGGAGCAGATCCGGCGAAGCCCGCCCGGTCCAACCAG 715
consensus_7159#1 CCGCACGCCGCTCGCCA------------------------------------------- 669
consensus_7159#2 CCGCACGCCGCTCGCCACCGAGCTGGAGCAGATCCCGGCGAAGCCGCCGGTCAACAAAAC 491
*****************
consensus_7159#0 AACCAAAACGAAAANAGTTCATCCGGGAAGATNCGNGCCACGGCTTGCAGACCGGAAGGA 775
consensus_7159#1 ------------------------------------------------------------
consensus_7159#2 CAAAACGAAAAAC----------------------------------------------- 504
consensus_7159#0 CATTCGACTGGTCCGATAGCGGNGAACTCTTCGTCGGGGAAANAAGAAGTTTCTCAGC 833
consensus_7159#1 ----------------------------------------------------------
consensus_7159#2 ----------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||