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Anopheles gambiae
cluster # 7244 cluster # 7244       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7244#0 length = 1747 sequences # 3  
consensus_7244#1 length = 1096 sequences # 3  
consensus_7244#2 length = 870 sequences # 1  

consensusID : consensus_7244#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1747
fasta sequence
                              [CACGCGTCCGGCAATTGGGAAGGAGTGCAAATGATTCATTTGTAAGTGTAAATCTCAATGATGAAAGTCCACATGTACCCTAAGCGTTCTTGGCGCCAGCGTGCGCTCTGTTGCGTGCGTCGGTGTGCTGTAGATCGTTGTTCACTTTCATGCATCTTCCTTTCTTTTTCCCAGTCGATGTCAATTACACACTGTTATAGAAGTTTTGAAGCTTGAAAAGTTTGCTCTTGCACTGCAACACGCACTGACTCTGACTAAATGTAGCAAAACAAAAAGCTTAGCTTTGTTTCGGAACTTCGATGTCAGCAATCGAGCACGAGGTCCGTACGGGCAATGTTAAAGTCTGTTAAGATGACTACCAAAAGCAAAGCGAAAACTCTTTGTACAGGTTGATCAAGGTTAATACAACACACACACATTTTCCCATTCAGTGCAGATGAAAGGCAAACAAAACAAGCCGAAATCATAGTTTCACAGTTTCACGAGCTAGATAAGTGTTTCTGAGCCACGTGTGGAAAGCAGCTGCAGTTAGTTGCTGTGTTTAAGGC--AAATATCATCCATACATATCGATAGTAAGAAGCATTACGCTGCTCACGGTGCTGCTCAACAGACAGAAACGGTGAGACGCAAACGATTTACACTAACAGTTCGAATTCTTATCTGCACCATTGTTTGACGCCGTACGGAAGCATGCTTGCAAGGTGTTTGTTATTGAAAGTACAGTCGATTTTCTGTCATTTTTTATCGTTGCCACCACACACTGCACCACAAACCCTTACAAGTGTTTTCTACCAAATGTATTGTTCAATTTGCCAAATTAATGTGAAATACCCGGTTTGGAGGTAATGAAAATGAAAACAAAACAAAAAAAGCACCAGAAACACTCTCCGCAGCGAGTACACTGGTTATGCATTCCGTTTTTCTTCACTCCTTTAGATGTATGTCTGTGCTGTTTGTGCAGATCTGTATGTGGGTGCGTACGTTTAAACCCATCATTTTCCCGTCCCACGTTGGTTGGTGTGGGGGGCGTAAAACAAAGGATTAAAAGGGATAGAGACGAGCAAATAACCCCTCTTTAAGGAGCGTAAGTGTACGAATCGTTCTGGTCTTACGTGTTCAATTTCAATCACTTTCNATCTCGATGTTCTTGTTGCTCGTAACGCGGTGGCAGCTAATGGTGTGGAANGGTAAAAGCATTAGAAGGAAAGAGAATGGACAAGTGAAGCAAAAAATAACGGAAAAGAAAAACAAGACCCCAAAAGACAGAAGAAAAAAAACAAATCATAATACATATATTATACAAGATAAGAAAGCAAAAGACAAAACGCAAATCGCAAACTGTTAAACTAATTGTTCAATTTATTTACGATAAACGGAAGCTTGTTGTTACTGATACCGATTTTCACAAGTTCATAACAAAACCACACAAAAACATAACTGGCAAGCAAAACGAAAGGAAGAATCTCAATGTAAGTTCAGAAATGTCTCCAAAAATAGCATCTAAACCACAAGATAAACCAAAACAGCAATCACAAAGAAACCCACTCGCCAGTGTAGACAGCAACAGAGGCAGTAGCTGTGTAAGTATTAGTGCTAGAACAGAGCAGTAGCGGCAGCAGCAGCAGTGCCGCAGTAAACGCGCAATCGAAAGGTAAACGGGCAATCTGTAGCGTACCGTAGCTAATCGTATACCGCTGCTAGTAGACACTGTGAAACTCCCATTAGAAAACGGCAATAGCACACACAC]

[+] EMBL BM620511             [CACGCGTCCGGCAATTGGGAAGGAGTGCAAATGATTCATTTGTAAGTGTAAATCTCAATGATGAAAGTCCACATGTACCCTAAGCGTTCTTGGCGCCAGCGTGCGCTCTGTTGCGTGCGTCGGTGTGCTGTAGATCGTTGTTCACTTTCATGCATCTTCCTTTCTTTTTCCCAGTCGATGTCAATTACACACTGTTATAGAAGTTTTGAAGCTTGAAAAGTTTGCTCTTGCACTGCAACACGCACTGACTCTGACTAAATGTAGCAAAACAAAAAGCTTAGCTTTGTTTCGGAACTTCGATGTCAGCAATCGAGCACGAGGTCCGTACGGGCAATGTTAAAGTCTGTTAAGATGACTACCAAAAGCAAAGCGAAAACTCTTTGTACAGGTTGATCAAGGTTAATACAACACACACACATTTTCCCATTCAGTGCAGATGAAAGGCAAACAAAACAAGCCGAAATCATAGTTTCACAGTTTCACGAGCTAGATAAGTGTTTCTGAGCCACGTGTGGAAAGCAGCTGCAGTTAGTTGCTGTGTTTAAGGCAAAAATATCATCCATACATATCGATAGTAAGAAGCATTACGCTGCTCACGGTGCTGCTCAACAGACAGAAACGGTGAGACGCAAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX625580             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTGGCAAGCAGGTGCAGTTAGTTGCTGTGTTTAAGGC  AAATATCATCCACACATATCGATAGTAAGAAGCATTACGCTGCTCACGGTGCTGCTCAACAGACAGGAACGGTGAGACGCAAACGATTTACACTAACAGTTCGAATTCTTATCTGCACCATTGTTTGACGCCGTACGGAAGCATGCTTGCAAGGTGTTTGTTATTGAAAGTACAGTCGATTTTCTGTCATTTTTTATCGTTGCCACCACACACTGCACCACAAACCCTTACAAGTGTTTTCTACCAAATGTATTGTTCAATTTGCCAAATTAATGTGAAATACCCGGTTTGGAGGTAATGAAAATGAAAACAAAACAAAAAAAGCACCAGAAACACTCTCCGCAGCGAGTACACTGGTTATGCATTCCGTTTTTCTTCACTCCTTTAGATGTATGTCTGTGCTGTTTGTGCAGATCTGTATGTGGGTGCGTACGTTTAAACCCATCATTTTCCCGTCCCACGTTGGTTGGTGTGGGGGGCGTAAAACAAAGGATTAAAAGGGATAGAGACGAGCAAATAACCCCTCTTTAAGGAGCGTAAGTGTACGAATCGTTCTGGTCTTACGTGTTCAATTTCAATCACTTTCNATCTCGATGTTCTTGTTGCTCGTAACGCGGTGGCAGCTAATGGTGTGGAAN                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX612947             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGTTCTGGTCTTAAGTGTTCACTTTCAATCACTTTCAATCTCGATGTTCTTGTTGCTCGTAACGCGGTGGCAGCTAATGGTGTGGAAAGGTAAAAGCATTAGAAGGAAAGAGAATGGACAAGTGAAGCAAAAAATAACGGAAAAGAAAAACAAGACCCCAAAAGACAGAAGAAAAAAAACAAATCATAATACATATATTATACAAGATAAGAAAGCAAAAGACAAAACGCAAATCGCAAACTGTTAAACTAATTGTTCAATTTATTTACGATAAACGGAAGCTTGTTGTTACTGATACCGATTTTCACAAGTTCATAACAAAACCACACAAAAACATAACTGGCAAGCAAAACGAAAGGAAGAATCTCAATGTAAGTTCAGAAATGTCTCCAAAAATAGCATCTAAACCACAAGATAAACCAAAACAGCAATCACAAAGAAACCCACTCGCCAGTGTAGACAGCAACAGAGGCAGTAGCTGTGTAAGTATTAGTGCTAGAACAGAGCAGTAGCGGCAGCAGCAGCAGTGCCGCAGTAAACGCGCAATCGAAAGGTAAACGGGCAATCTGTAGCGTACCGTAGCTAATCGTATACCGCTGCTAGTAGACACTGTGAAACTCCCATTAGAAAACGGCAATAGCACACACAC]


>consensus_7244#0 CACGCGTCCGGCAATTGGGAAGGAGTGCAAATGATTCATTTGTAAGTGTAAATCTCAATG ATGAAAGTCCACATGTACCCTAAGCGTTCTTGGCGCCAGCGTGCGCTCTGTTGCGTGCGT CGGTGTGCTGTAGATCGTTGTTCACTTTCATGCATCTTCCTTTCTTTTTCCCAGTCGATG TCAATTACACACTGTTATAGAAGTTTTGAAGCTTGAAAAGTTTGCTCTTGCACTGCAACA CGCACTGACTCTGACTAAATGTAGCAAAACAAAAAGCTTAGCTTTGTTTCGGAACTTCGA TGTCAGCAATCGAGCACGAGGTCCGTACGGGCAATGTTAAAGTCTGTTAAGATGACTACC AAAAGCAAAGCGAAAACTCTTTGTACAGGTTGATCAAGGTTAATACAACACACACACATT TTCCCATTCAGTGCAGATGAAAGGCAAACAAAACAAGCCGAAATCATAGTTTCACAGTTT CACGAGCTAGATAAGTGTTTCTGAGCCACGTGTGGAAAGCAGCTGCAGTTAGTTGCTGTG TTTAAGGCAAATATCATCCATACATATCGATAGTAAGAAGCATTACGCTGCTCACGGTGC TGCTCAACAGACAGAAACGGTGAGACGCAAACGATTTACACTAACAGTTCGAATTCTTAT CTGCACCATTGTTTGACGCCGTACGGAAGCATGCTTGCAAGGTGTTTGTTATTGAAAGTA CAGTCGATTTTCTGTCATTTTTTATCGTTGCCACCACACACTGCACCACAAACCCTTACA AGTGTTTTCTACCAAATGTATTGTTCAATTTGCCAAATTAATGTGAAATACCCGGTTTGG AGGTAATGAAAATGAAAACAAAACAAAAAAAGCACCAGAAACACTCTCCGCAGCGAGTAC ACTGGTTATGCATTCCGTTTTTCTTCACTCCTTTAGATGTATGTCTGTGCTGTTTGTGCA GATCTGTATGTGGGTGCGTACGTTTAAACCCATCATTTTCCCGTCCCACGTTGGTTGGTG TGGGGGGCGTAAAACAAAGGATTAAAAGGGATAGAGACGAGCAAATAACCCCTCTTTAAG GAGCGTAAGTGTACGAATCGTTCTGGTCTTACGTGTTCAATTTCAATCACTTTCNATCTC GATGTTCTTGTTGCTCGTAACGCGGTGGCAGCTAATGGTGTGGAANGGTAAAAGCATTAG AAGGAAAGAGAATGGACAAGTGAAGCAAAAAATAACGGAAAAGAAAAACAAGACCCCAAA AGACAGAAGAAAAAAAACAAATCATAATACATATATTATACAAGATAAGAAAGCAAAAGA CAAAACGCAAATCGCAAACTGTTAAACTAATTGTTCAATTTATTTACGATAAACGGAAGC TTGTTGTTACTGATACCGATTTTCACAAGTTCATAACAAAACCACACAAAAACATAACTG GCAAGCAAAACGAAAGGAAGAATCTCAATGTAAGTTCAGAAATGTCTCCAAAAATAGCAT CTAAACCACAAGATAAACCAAAACAGCAATCACAAAGAAACCCACTCGCCAGTGTAGACA GCAACAGAGGCAGTAGCTGTGTAAGTATTAGTGCTAGAACAGAGCAGTAGCGGCAGCAGC AGCAGTGCCGCAGTAAACGCGCAATCGAAAGGTAAACGGGCAATCTGTAGCGTACCGTAG CTAATCGTATACCGCTGCTAGTAGACACTGTGAAACTCCCATTAGAAAACGGCAATAGCA CACACAC



consensusID : consensus_7244#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1096
fasta sequence
                              [CCGCGCACTGACTCTGACTAAATGTAGCAAAACCAAAAGCTTAGCTTTGTCTCGTAACTTCGATGTCAGCAATCGAGCTCGAGGTCCGTAGCACAATCATCAGAATTAACACGCCTTTGATGTAGTTTCAAGTGACGGGCAATGTTAAAGTCTGTTATGATGCACTTTGTACAGGTTGACCAAGGTTAATACAACACACACATTTTCCCATTCAGTGCTGGTGGAAGGCAAACAAAACGAGCCGAAATCATAGTTTCACAGTTTCACGAGCTAGATAAGTGTTTCTGAGCCACGTGTGGAAAGCAGGTGCAGTTAGTTGCTGTGTTTAAGGCAAATATCATCCATACATATCGATAGCAAGAAGCATTACGCTACTCACGGTGCTGCTCAACAGACAGGAACGGTGAGACGCAAACGATTTACACTAACAGTTCGAATTCTCATTTGCACCATTGTTTGACGCCGTACCGAAGCTTGCACGCAAGGTGTTTGTTATTGAAAGTACAGTCGATTTTCTGTCATTTTTTGTCGTTGCCACCATACACTGCACCACAAACCCTTACAAGTGTTTTCTACCAAATGTATTGTTCAATTTGCCAAATTAATGTGAAATACCCGATTTGGAGGTAATGAAAACAAACAACAAAAAAAGCACCAGAAACACTCTCCGCAGCGAGTACACTGGTTATGCATTCCGTTTTTCTTCACTCCTTTAGATGTATGTCTGTGCTGTGGGTGGTAACTGTTTGTGCAGATCTGTATGTGCGTGCGTACGTTTAAACCCATCATTTTCCCGTCCCACGTTGGTTGGTTTGGGGGGCGTAAAACAAAGGATTAAAAGGGATAGAGACGAGCAAATAACCCCTCTTTAAGGAGCGTAAGTGTACGAATCGTTCTGGTCTTAAGTGTTCAATTTCAATCACTTTCAATCTCGATGTTCTTGTTGCTCGTAACGCGGTGGCAGCTAATGGTGTGGAAGGTGTAAAAGCGAAGAAAAAAAACTAAACACTCTCTCACACACACACACACACTCAGACACAGATAATCTCGAATTTCATACACGTATATATTTGGACACAGAACTTTCAAGAAAATA]

[+] EMBL BM648071             [CCGCGCACTGACTCTGACTAAATGTAGCAAAACCAAAAGCTTAGCTTTGTCTCGTAACTTCGATGTCAGCAATCGAGCTCGAGGTCCGTAGCACAATCATCAGAATTAACACGCCTTTGATGTAGTTTCAAGTGACGGGCAATGTTAAAGTCTGTTATGATGCACTTTGTACAGGTTGACCAAGGTTAATACAACACACACATTTTCCCATTCAGTGCTGGTGGAAGGCAAACAAAACGAGCCGAAATCATAGTTTCACAGTTTCACGAGCTAGATAAGTGTTTCTGAGCCACGTGTGGAAAGCAGGTGCAGTTAGTTGCTGTGTTTAAGGCAAATATCATCCATACATATCGATAGCAAGAAGCATTACGCTACTCACGGTGCTGCTCAACAGACAGGAACGGTGAGACGCAAACGATTTACACTAACAGTTCGAATTCTCATTTGCACCATTGTTTGACGCCGTACCGAAGCTTGCACGCAAGGTGTTTGTTATTGAAAGTACAGTCGATTTTCTGTCATTTTTTGTCGTTGCCACCATACACTGCACCACAAACCCTTACAAGTGTTTTCTACCAAATGTATTGTTCAATTTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM578613             [                                                                                                                                                                                                                                                                                                                                                                     ccgGAAGCATTACGCTACTCACGGTGCTGCTCAACAGACAGGAACGGTGAGACGCAAACGATTTACACTAACAGTTCGAATTCTCATTTGCACCATTTTTTGACGCCGTACCGAAGCTTGCACGCAAGGTGTTTGTTATTGAAAGTACAGTCGATTTTCTGTCATTTTTTGTCGTTGCCACCATACACTGCACCACAAACCCTTACAAGTGTTTTCTACCAAATGTATTGTTCAATTTGCCAAATTAATGTGAAATACCCGATTTGGAGGTAATGAAAACAAACAACAAAAAAAGCACCAGAAACACTCTCCGCAGCGAGTACACTGGTTATGCATTCCGTTTTTCTTCACTCCTTTAGATGTATGTCTGTGCTGTGGGTGGTAACTGTTTGTGCAGATCTGTATGTGCGTGCGTACGTTTAAACCCATCATTTTCCCGTCCCACGTTGGTTGGTTTGGGGGGCGTAAAACAAAGGATTAAAAGGGATAGAGACGAGCAAATAACCCCTCTTTAAGGAGCGTAAGTGTACGAATCGTTCTGGTCTTAAGTGTTCAATTTCAATCACTTTCAATCTCGATGTTCTTGTTGCTCGTAACGCGGTGGCAGCTAATGGTGTGGAAGGTGTAAAAGCGAAGAAAAAAAACTAAACACTC                                                                                     ]
[+] EMBL BX613259             [                                                                                                                                                                                                                                                                                                                                                                                                                                              GTTCGAATTCTCATTTGCACCATTGTTTGACGCCGTACCGAAGCTTGCACGCAAGGGGTTTGTTATTGAAAGTACAGTCGAATTTCTGTCATTTTTTGTCGTTGCCACCATACACTGCACCACAAACCCTTACAAGTGTTTTCTACCAAATGTATTGTTCAATTTGCCAAATTAATGTGAAATACCCGATTTGGAGGTAATGAAAACAAACAACAAAAAAAGCACCAGAAACACTCTCCGCAGCGAGTACACTGGTTATGCATTCCGTTTTTCTTCACTCCTTTAGAAGTATGTCTGTGCTGTGGGTGGTAACTGTTTGTGCAGATCTGTATGTGCGTGCGTACGTTTAAACCCATCATTTTCCCGTCCCACGTTGGTTGGTTTGGGGGGCGTAAAACAAAGGAATAAAAGGGAAAGAGACGAGCAAATAACCCCCCTTTAAGGAGCGTAAGTGTACGAAACGTTCTGGTCTTAAGTGTTCAATATCAATCACTTTCAATCTCGATGTTCTTGTTGCTCGTAACGCGGTGGCAGCTAATGGTGTGGAAGGGGTAAAAGCGAAGAAAAAAAACAAAACACTCTCTCACACACACACACACACTCAGACACAGATAATCTCGAATTTCATACACGTATATATTTGGACACAGAACTTTCAAGAAAATA]


>consensus_7244#1 CCGCGCACTGACTCTGACTAAATGTAGCAAAACCAAAAGCTTAGCTTTGTCTCGTAACTT CGATGTCAGCAATCGAGCTCGAGGTCCGTAGCACAATCATCAGAATTAACACGCCTTTGA TGTAGTTTCAAGTGACGGGCAATGTTAAAGTCTGTTATGATGCACTTTGTACAGGTTGAC CAAGGTTAATACAACACACACATTTTCCCATTCAGTGCTGGTGGAAGGCAAACAAAACGA GCCGAAATCATAGTTTCACAGTTTCACGAGCTAGATAAGTGTTTCTGAGCCACGTGTGGA AAGCAGGTGCAGTTAGTTGCTGTGTTTAAGGCAAATATCATCCATACATATCGATAGCAA GAAGCATTACGCTACTCACGGTGCTGCTCAACAGACAGGAACGGTGAGACGCAAACGATT TACACTAACAGTTCGAATTCTCATTTGCACCATTGTTTGACGCCGTACCGAAGCTTGCAC GCAAGGTGTTTGTTATTGAAAGTACAGTCGATTTTCTGTCATTTTTTGTCGTTGCCACCA TACACTGCACCACAAACCCTTACAAGTGTTTTCTACCAAATGTATTGTTCAATTTGCCAA ATTAATGTGAAATACCCGATTTGGAGGTAATGAAAACAAACAACAAAAAAAGCACCAGAA ACACTCTCCGCAGCGAGTACACTGGTTATGCATTCCGTTTTTCTTCACTCCTTTAGATGT ATGTCTGTGCTGTGGGTGGTAACTGTTTGTGCAGATCTGTATGTGCGTGCGTACGTTTAA ACCCATCATTTTCCCGTCCCACGTTGGTTGGTTTGGGGGGCGTAAAACAAAGGATTAAAA GGGATAGAGACGAGCAAATAACCCCTCTTTAAGGAGCGTAAGTGTACGAATCGTTCTGGT CTTAAGTGTTCAATTTCAATCACTTTCAATCTCGATGTTCTTGTTGCTCGTAACGCGGTG GCAGCTAATGGTGTGGAAGGTGTAAAAGCGAAGAAAAAAAACTAAACACTCTCTCACACA CACACACACACTCAGACACAGATAATCTCGAATTTCATACACGTATATATTTGGACACAG AACTTTCAAGAAAATA



consensusID : consensus_7244#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 870
fasta sequence
                              [GGCCAGAATCCNGCACGAGTGTTAAGTCTGTTATGATGCACTTTGTACAGGTTGACCAAGGTTAATACAACACACACATTTTCCCATTCAGTGCTGGTGGAAGGCAAACAAAACAAGCCGAAATCATAGTTTCACAGTTTCACGAGCTAGATAAGTGTTTCTGAGCCACGTGTGGCAAGCAGGTGCAGTTAGTTGCTGTGTTTAAGGCAAATATCATCCACACATATCGATAGTAAGGAAGCATTACGCTGCTCACGGTGCTGCTCAACAGACAGGAACGGTGAGACGCAAACGATTTACACTAACAGTTCGAATTCTTATCTGCACCATTGTTTGACGCCGTACGGAAGCATGCTTGCAAGGTGTTATGTTATTGAAAGTACAGTCGATTTTCTGTCACTTTGGTTATCGTTGCCACCACGACACTGGACCACAAACCCTTACAAGTGTTTTCTACCAAATGTATTGTTCAATTTGGCCAAATTCNNTGTGAAATACCCGGGTTTGGCAAGGTAANTGAACAACTGAAAAGCAAAACGAAGACANAAAGCACCAGAAACACGTCTACCGGCAGCGGAGGTTAACCACCTGGGGTTATGCNNNACTTTCCCGGATGACGNAGTACTTTCAACTTCCCTTTTTAGGANTGNGTAATGTCCNTCGGGTTAGGCCTTGGGTTTATCACGGGTCGCGCAAGGAAATACTCGGCGGAAACTGTTTGGGGGGNTCGCCGNTNAACCGGTTTNTAGAGAAAAAACCGCCCGATTTCACATTNGTTTCCACCGCAGGGTTCACCCGCAAACGAGGTTTAGGNGGATTCGGNGGAGAGNTTTGGAGGAAGGAGGGNCANGNTTAAAGANACACAAACAA]

[+] EMBL BX467894             [GGCCAGAATCCNGCACGAGTGTTAAGTCTGTTATGATGCACTTTGTACAGGTTGACCAAGGTTAATACAACACACACATTTTCCCATTCAGTGCTGGTGGAAGGCAAACAAAACAAGCCGAAATCATAGTTTCACAGTTTCACGAGCTAGATAAGTGTTTCTGAGCCACGTGTGGCAAGCAGGTGCAGTTAGTTGCTGTGTTTAAGGCAAATATCATCCACACATATCGATAGTAAGGAAGCATTACGCTGCTCACGGTGCTGCTCAACAGACAGGAACGGTGAGACGCAAACGATTTACACTAACAGTTCGAATTCTTATCTGCACCATTGTTTGACGCCGTACGGAAGCATGCTTGCAAGGTGTTATGTTATTGAAAGTACAGTCGATTTTCTGTCACTTTGGTTATCGTTGCCACCACGACACTGGACCACAAACCCTTACAAGTGTTTTCTACCAAATGTATTGTTCAATTTGGCCAAATTCNNTGTGAAATACCCGGGTTTGGCAAGGTAANTGAACAACTGAAAAGCAAAACGAAGACANAAAGCACCAGAAACACGTCTACCGGCAGCGGAGGTTAACCACCTGGGGTTATGCNNNACTTTCCCGGATGACGNAGTACTTTCAACTTCCCTTTTTAGGANTGNGTAATGTCCNTCGGGTTAGGCCTTGGGTTTATCACGGGTCGCGCAAGGAAATACTCGGCGGAAACTGTTTGGGGGGNTCGCCGNTNAACCGGTTTNTAGAGAAAAAACCGCCCGATTTCACATTNGTTTCCACCGCAGGGTTCACCCGCAAACGAGGTTTAGGNGGATTCGGNGGAGAGNTTTGGAGGAAGGAGGGNCANGNTTAAAGANACACAAACAA]


>consensus_7244#2 GGCCAGAATCCNGCACGAGTGTTAAGTCTGTTATGATGCACTTTGTACAGGTTGACCAAG GTTAATACAACACACACATTTTCCCATTCAGTGCTGGTGGAAGGCAAACAAAACAAGCCG AAATCATAGTTTCACAGTTTCACGAGCTAGATAAGTGTTTCTGAGCCACGTGTGGCAAGC AGGTGCAGTTAGTTGCTGTGTTTAAGGCAAATATCATCCACACATATCGATAGTAAGGAA GCATTACGCTGCTCACGGTGCTGCTCAACAGACAGGAACGGTGAGACGCAAACGATTTAC ACTAACAGTTCGAATTCTTATCTGCACCATTGTTTGACGCCGTACGGAAGCATGCTTGCA AGGTGTTATGTTATTGAAAGTACAGTCGATTTTCTGTCACTTTGGTTATCGTTGCCACCA CGACACTGGACCACAAACCCTTACAAGTGTTTTCTACCAAATGTATTGTTCAATTTGGCC AAATTCNNTGTGAAATACCCGGGTTTGGCAAGGTAANTGAACAACTGAAAAGCAAAACGA AGACANAAAGCACCAGAAACACGTCTACCGGCAGCGGAGGTTAACCACCTGGGGTTATGC NNNACTTTCCCGGATGACGNAGTACTTTCAACTTCCCTTTTTAGGANTGNGTAATGTCCN TCGGGTTAGGCCTTGGGTTTATCACGGGTCGCGCAAGGAAATACTCGGCGGAAACTGTTT GGGGGGNTCGCCGNTNAACCGGTTTNTAGAGAAAAAACCGCCCGATTTCACATTNGTTTC CACCGCAGGGTTCACCCGCAAACGAGGTTTAGGNGGATTCGGNGGAGAGNTTTGGAGGAA GGAGGGNCANGNTTAAAGANACACAAACAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7244#0      CACGCGTCCGGCAATTGGGAAGGAGTGCAAATGATTCATTTGTAAGTGTAAATCTCAATG 60
consensus_7244#1      ------------------------------------------------------------
consensus_7244#2      ------------------------------------------------------------
                                                                                  

consensus_7244#0      ATGAAAGTCCACATGTACCCTAAGCGTTCTTGGCGCCAGCGTGCGCTCTGTTGCGTGCGT 120
consensus_7244#1      ------------------------------------------------------------
consensus_7244#2      ------------------------------------------------------------
                                                                                  

consensus_7244#0      CGGTGTGCTGTAGATCGTTGTTCACTTTCATGCATCTTCCTTTCTTTTTCCCAGTCGATG 180
consensus_7244#1      ------------------------------------------------------------
consensus_7244#2      ------------------------------------------------------------
                                                                                  

consensus_7244#0      TCAATTACACACTGTTATAGAAGTTTTGAAGCTTGAAAAGTTTGCTCTTGCACTGCAACA 240
consensus_7244#1      ---------------------------------------------------------CCG 3
consensus_7244#2      ------------------------------------------------------------
                                                                                  

consensus_7244#0      CGCACTGACTCTGACTAAATGTAGCAAAACAAAAAGCTTAGCTTTGTTTCGGAACTTCGA 300
consensus_7244#1      CGCACTGACTCTGACTAAATGTAGCAAAACCAAAAGCTTAGCTTTGTCTCGTAACTTCGA 63
consensus_7244#2      ------------------------------------------------------------
                                                                                  

consensus_7244#0      TGTCAGCAATCGAGCACGAGGTCCGTACGGGCAATGTTAAAGTCTG-------------- 346
consensus_7244#1      TGTCAGCAATCGAGCTCGAGGTCCGTAGCACAATCATCAGAATTAACACGCCTTTGATGT 123
consensus_7244#2      ------------------------------------------------------------
                                                                                  

consensus_7244#0      ---TTAAGATGACTACCAAAAGCAAAGCG------AAAACTCTTTGTACAGGTTGATCAA 397
consensus_7244#1      AGTTTCAAGTGACGGGCAATGTTAAAGTCTGTTATGATGCACTTTGTACAGGTTGACCAA 183
consensus_7244#2      -GGCCAGAATCCNGCACGAGTGTTAAGTCTGTTATGATGCACTTTGTACAGGTTGACCAA 59
                               *      * *     ***         *  * *************** ***

consensus_7244#0      GGTTAATACAACACACACACATTTTCCCATTCAGTGCAGATGAAAGGCAAACAAAACAAG 457
consensus_7244#1      GGTTAATACAACACACACA--TTTTCCCATTCAGTGCTGGTGGAAGGCAAACAAAACGAG 241
consensus_7244#2      GGTTAATACAACACACACA--TTTTCCCATTCAGTGCTGGTGGAAGGCAAACAAAACAAG 117
                      *******************  **************** * ** ************** **

consensus_7244#0      CCGAAATCATAGTTTCACAGTTTCACGAGCTAGATAAGTGTTTCTGAGCCACGTGTGGAA 517
consensus_7244#1      CCGAAATCATAGTTTCACAGTTTCACGAGCTAGATAAGTGTTTCTGAGCCACGTGTGGAA 301
consensus_7244#2      CCGAAATCATAGTTTCACAGTTTCACGAGCTAGATAAGTGTTTCTGAGCCACGTGTGGCA 177
                      ********************************************************** *

consensus_7244#0      AGCAGCTGCAGTTAGTTGCTGTGTTTAAGGCAAATATCATCCATACATATCGATAGTAAG 577
consensus_7244#1      AGCAGGTGCAGTTAGTTGCTGTGTTTAAGGCAAATATCATCCATACATATCGATAGCAAG 361
consensus_7244#2      AGCAGGTGCAGTTAGTTGCTGTGTTTAAGGCAAATATCATCCACACATATCGATAGTAAG 237
                      ***** ************************************* ************ ***

consensus_7244#0      -AAGCATTACGCTGCTCACGGTGCTGCTCAACAGACAGAAACGGTGAGACGCAAACGATT 636
consensus_7244#1      -AAGCATTACGCTACTCACGGTGCTGCTCAACAGACAGGAACGGTGAGACGCAAACGATT 420
consensus_7244#2      GAAGCATTACGCTGCTCACGGTGCTGCTCAACAGACAGGAACGGTGAGACGCAAACGATT 297
                       ************ ************************ *********************

consensus_7244#0      TACACTAACAGTTCGAATTCTTATCTGCACCATTGTTTGACGCCGTACGGAAGCATGCTT 696
consensus_7244#1      TACACTAACAGTTCGAATTCTCATTTGCACCATTGTTTGACGCCGTACCGAAGCTTGCAC 480
consensus_7244#2      TACACTAACAGTTCGAATTCTTATCTGCACCATTGTTTGACGCCGTACGGAAGCATGCTT 357
                      ********************* ** *********************** ***** ***  

consensus_7244#0      GCAAGGTGTT-TGTTATTGAAAGTACAGTCGATTTTCTGTCATTTT--TTATCGTTGCCA 753
consensus_7244#1      GCAAGGTGTT-TGTTATTGAAAGTACAGTCGATTTTCTGTCATTTT--TTGTCGTTGCCA 537
consensus_7244#2      GCAAGGTGTTATGTTATTGAAAGTACAGTCGATTTTCTGTCACTTTGGTTATCGTTGCCA 417
                      ********** ******************************* ***  ** *********

consensus_7244#0      CCAC-ACACTGCACCACAAACCCTTACAAGTGTTTTCTACCAAATGTATTGTTCAATTTG 812
consensus_7244#1      CCAT-ACACTGCACCACAAACCCTTACAAGTGTTTTCTACCAAATGTATTGTTCAATTTG 596
consensus_7244#2      CCACGACACTGGACCACAAACCCTTACAAGTGTTTTCTACCAAATGTATTGTTCAATTTG 477
                      ***  ****** ************************************************

consensus_7244#0      -CCAAATT-AATGTGAAATACCCGGTTTGGAGGTAATGAAAATGAAAACAAAACAAAAAA 870
consensus_7244#1      -CCAAATT-AATGTGAAATACCCGATTTGGAGGTAATGAAAACAA----ACAACAAAAAA 650
consensus_7244#2      GCCAAATTCNNTGTGAAATACCCGGGTTTG--GCAAGGTAANTGA----ACAACTGAAAA 531
                       *******   *************  ** *  * ** * **   *    * ***  ****

consensus_7244#0      AGCACCAGAAACACTCTCCGCAGCGAGTACACTGGTTATGCATTCCGTTTTTCTTCACTC 930
consensus_7244#1      AGCACCAGAAACACTCTCCGCAGCGAGTACACTGGTTATGCATTCCGTTTTTCTTCACTC 710
consensus_7244#2      -GCAAAACGAAGACANAAAGCACCAGAAACACG---TCTACCGGCAGCGGAGGTTAACCA 587
                       ***  *  ** **     *** *    ****    * * *   * *      ** **  

consensus_7244#0      CTTTAGATGTATGTCTGTGCTGT-------------TTGTGCAGATCTGTATGTGGGTGC 977
consensus_7244#1      CTTTAGATGTATGTCTGTGCTGTGGGTGGTAACTGTTTGTGCAGATCTGTATGTGCGTGC 770
consensus_7244#2      CCTGGGGT-TATG-CNNNACTTT----------------------CCCGGATG-ACGNA- 621
                      * *  * * **** *    ** *                       * * ***   *   

consensus_7244#0      GTACGTTTAAACCCATCATTTTC--CCGTCCCACGTTGGTTGGTGTGGGGG--GCGTAAA 1033
consensus_7244#1      GTACGTTTAAACCCATCATTTTC--CCGTCCCACGTTGGTTGGTTTGGGGG--GCGTAAA 826
consensus_7244#2      GTACTTTCAACTTCCCTTTTTAGGANTGNGTAATGTCCNTCGGGTTAGGCCTTGGGTTTA 681
                      **** ** **   *    ***      *    * **   * **  * **    * **  *

consensus_7244#0      ACAAAGGATTAAAAGGGATAGAGACGAGCAAATAACCCCTCTTTAAGGAGCGTAAGTGTA 1093
consensus_7244#1      ACAAAGGATTAAAAGGGATAGAGACGAGCAAATAACCCCTCTTTAAGGAGCGTAAGTGTA 886
consensus_7244#2      TCACGGGTCGCGCAAGGAAATACTCG-GCGG--AAACTGTTTGGGGGGNTCGCCGNTNAA 738
                       **  **      * *** * *  ** **    ** *  * *    **  **    *  *

consensus_7244#0      CGAATCGTTCTGGTCTTACGTGTTCAATTTCA-ATCACTTTCNATCTCGATGTTCTTGTT 1152
consensus_7244#1      CGAATCGTTCTGGTCTTAAGTGTTCAATTTCA-ATCACTTTCAATCTCGATGTTCTTGTT 945
consensus_7244#2      CCGGTTTNTAGAGAAAAAACCGCCCGATTTCACATTNGTTTCCACCGCAGGGTTC----- 793
                      *   *   *   *    *   *  * ****** **   **** * * *   ****     

consensus_7244#0      GCTCGTAA-CGCGGTGGCAGCTAATGGTGTGGAANG-GTAAAAGCATTAGAAGGAAAGAG 1210
consensus_7244#1      GCTCGTAA-CGCGGTGGCAGCTAATGGTGTGGAAGGTGTAAAAGC----GAAGAAAAAAA 1000
consensus_7244#2      ACCCGCAAACGAGGTTTAGGNGGATTCGGNGGAGAGNTTTGGAGGA--AGGAGGGNCANG 851
                       * ** ** ** ***    *   **   * ***  *  *   **     * **       

consensus_7244#0      AATGGACAAG-TGAAGCAAAAAATAACGGAAA-AGAAAAACAAGACCCCAAAAGACAGAA 1268
consensus_7244#1      ACTAAACACTCTCTCACACACACACACACACTCAGACACAGATAATCTCGAATTTCATAC 1060
consensus_7244#2      NTTAAAGANACACAAACAA----------------------------------------- 870
                        *  * *        **                                          

consensus_7244#0      GAAAAAAAACAAATCATAATACATATATTATACAAGATAAGAAAGCAAAAGACAAAACGC 1328
consensus_7244#1      ------ACGTATATATTTGGACACAGAACTTTCAAGAAAATA------------------ 1096
consensus_7244#2      ------------------------------------------------------------
                                                                                  

consensus_7244#0      AAATCGCAAACTGTTAAACTAATTGTTCAATTTATTTACGATAAACGGAAGCTTGTTGTT 1388
consensus_7244#1      ------------------------------------------------------------
consensus_7244#2      ------------------------------------------------------------
                                                                                  

consensus_7244#0      ACTGATACCGATTTTCACAAGTTCATAACAAAACCACACAAAAACATAACTGGCAAGCAA 1448
consensus_7244#1      ------------------------------------------------------------
consensus_7244#2      ------------------------------------------------------------
                                                                                  

consensus_7244#0      AACGAAAGGAAGAATCTCAATGTAAGTTCAGAAATGTCTCCAAAAATAGCATCTAAACCA 1508
consensus_7244#1      ------------------------------------------------------------
consensus_7244#2      ------------------------------------------------------------
                                                                                  

consensus_7244#0      CAAGATAAACCAAAACAGCAATCACAAAGAAACCCACTCGCCAGTGTAGACAGCAACAGA 1568
consensus_7244#1      ------------------------------------------------------------
consensus_7244#2      ------------------------------------------------------------
                                                                                  

consensus_7244#0      GGCAGTAGCTGTGTAAGTATTAGTGCTAGAACAGAGCAGTAGCGGCAGCAGCAGCAGTGC 1628
consensus_7244#1      ------------------------------------------------------------
consensus_7244#2      ------------------------------------------------------------
                                                                                  

consensus_7244#0      CGCAGTAAACGCGCAATCGAAAGGTAAACGGGCAATCTGTAGCGTACCGTAGCTAATCGT 1688
consensus_7244#1      ------------------------------------------------------------
consensus_7244#2      ------------------------------------------------------------
                                                                                  

consensus_7244#0      ATACCGCTGCTAGTAGACACTGTGAAACTCCCATTAGAAAACGGCAATAGCACACACAC 1747
consensus_7244#1      -----------------------------------------------------------
consensus_7244#2      -----------------------------------------------------------
                                                                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)