cluster # 7265

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Anopheles gambiae
cluster # 7265 cluster # 7265 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7265#0 length = 1012 sequences # 4

consensus_7265#1 length = 660 sequences # 2
consensus_7265#2 length = 205 sequences # 1

consensusID : consensus_7265#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1012
fasta sequence

                              [CCGGCAAAAACGGTAACAAAACAAACAAAAAAAACCATGAAAAGAATGAACGAATCACTTGTGGACACAAAATTGTTTTTAAAACAACCCTTCTAATTTCTCCCAATCCGCCCGCCACACTCACCCACACTCAGGAGAGCGTAACAAAGCGCATTACAAAAAGGAGAAAAATAATGTTACCGAAAAAGGAAACATCACAACACATTCTAGCACCCATCAGATAGACAGTGATTGGTAGTTCGCCCTTCCAGGAAAAAAAAACAATAACAAAAGATCATACGAATGTCCCTAATTTGACCCCCCCCCCCACCCCCATGGGCATGGGAAAAACGAAACAAACGAAAAATGTAAACAAAAACCCTCTAACCACTGTGAGTAGTAGCGCGCGGGTGGCCATCCTTCCCCTCCACTCTCTGCCCACCCCCTCGGAAGGGGTGAAAAATGTTAATTTTAAATGTCAACCACAAACCGAAAGCGCGAACCACAAGATAGCAAAGAAAGGATCTAGAGAAAGTATGAGTCTGCGTGTTTGTTTGTGTGTGTGTGTGTGTGAGAGACAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGGGAAAGTGACGAGTTTTAGTCCCACAAAAACAAAACAGGAAACTCCAAAACAACCTGTGGAAATGGTGTGGAAATAGAGAAGGCATGGGAAAGGGTAAAAAATACACAAATAGCTAGGCGTATGTGAGAGTGTGTGTATGCGTGGTTGTGTGTGCGTATGTATGTGTGTGTGATTGGATGAGGAGTGTGAGTGATGTGTGTGTGTGTGTGTGTGGGGGAGGGGGGGGCCAGCCGCCGCCATCATACCTTCACACACCACGACCCCCACCCATACCGTCACTTTCTTCGGCACACACACACATACACACACAGGCTCAAAAGCGCGATGCGAAACGAATCTATTTACATACACTTTTTTTTATTAAACTTAGTAAAAACAAACAACAACAAACAAACGAAACGAAACAAAA]

[+] EMBL BM627839             [CCGGCAAAAACGGTAACAAAACAAACAAAAAAAACCATGAAAAGAATGAACGAATCACTTGTGGACACAAAATTGTTTTTAAAACAACCCTTCTAATTTCTCCCAATCCGCCCGCCACACTCACCCACACTCAGGAGAGCGTAACAAAGCGCATTACAAAAAGGAGAAAAATAATGTTACCGAAAAAGGAAACATCACAACACATTCTAGCACCCATCAGATAGACAGTGATTGGTAGTTCGCCCTTCCAGGAAAAAAAAACAATAACAAAAGATCATACGAATGTCCCTAATTTGACCCCCCCCCCCACCCCCATGGGCATGGGAAAAACGAAACAAACGAAAAATGTAAACAAAAACCCTCTAACCACTGTGAGTAGTAGCGCGCGGGTGGCCATCCTTCCCCTCCACTCTCTGCCCACCCCCTCGGAAGGGGTGAAAAATGTTAATTTTAAATGTCAACCACAAACCGAAAGCGCGAACCACAAGATAGCAAAGAAAGGATCTAGAGAAAGTATGAGTCTGCGTGTTTGTGTGTGTGTGTGTGTGTGAGTGTGACAGAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AGA281786            [                                                                                                                                                                                                                                                                                                                                                                                                                      CCCCTCTCTGCCCACCCCCTCGGAAGGGGTGAAAAATGTTAATTTTAAATGTCAACCGCAAACCGAAAGCGCGAACCACAAGATAGCAAAGAAAGGATCTAGAGAAAGTATGAGTCTGCGTGTTTGTTTGTGTGTGTGTGTGTGTGAGAGACAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGGGAAAGTGACGAGTTTTAGTCCCACAAAAACAAAACAGGAAACTCCAAAACAACCTGTGGAAATGGTGTGGAAATAGAGAAGGCATGGGAAAGGGTAAAAAATACACAAATAGCTAGGCGTATGTGAGAGTGTGTGTATGCGTGGTTGTGTGTGCGTATGTATGTGTGTGTGATTGGATGAGGAGTGTGAGTGATGTGT                                                                                                                                                                                                                   ]
[+] EMBL BX612828             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGAGAAAGTATGAGTCTGCGTGTTTGTTTGTGTGTGTGTGTGTGTGAGAGACAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGGGAAAGTGACGAGTTTTAGTCCCACAAAAACAAAACAGGAAACTCCAAAACAACCTGTGGAAATGGTGTGGAAATAGAGAAGGCATGGGAAAGGGTAAAAAATACACAAATAGCTAGGCGTATGTGtgt                                                                                                                                                                                                                                                                                         ]
[-] EMBL AGA280089            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAAACAAAACAGGAAACTCCAAAACAACCTGTGGAAATGGTGTGGAAATAGAGAAGGCATGGGAAAGGGTAAAAAATACACAAATAGCTAGGCGTATGTGAGAGTGTGTGTATGCGTGGTTGTGTGTGCGTATGTATGTGTGTGTGATTGGATGAGGAGTGTGAGTGATGTGTGTGTGTGTGTGTGTGGGGGAGGGGGGGGCCAGCCGCCGCCATCATACCTTCACACACCACGACCCCCACCCATACCGTCACTTTCTTCGGCACACACACACATACACACACAGGCTCAAAAGCGCGATGCGAAACGAATCTATTTACATACACTTTTTTTTATTAAACTTAGTAAAAACAAACAACAACAAACAAACGAAACGAAACAAAA]




>consensus_7265#0
CCGGCAAAAACGGTAACAAAACAAACAAAAAAAACCATGAAAAGAATGAACGAATCACTT
GTGGACACAAAATTGTTTTTAAAACAACCCTTCTAATTTCTCCCAATCCGCCCGCCACAC
TCACCCACACTCAGGAGAGCGTAACAAAGCGCATTACAAAAAGGAGAAAAATAATGTTAC
CGAAAAAGGAAACATCACAACACATTCTAGCACCCATCAGATAGACAGTGATTGGTAGTT
CGCCCTTCCAGGAAAAAAAAACAATAACAAAAGATCATACGAATGTCCCTAATTTGACCC
CCCCCCCCACCCCCATGGGCATGGGAAAAACGAAACAAACGAAAAATGTAAACAAAAACC
CTCTAACCACTGTGAGTAGTAGCGCGCGGGTGGCCATCCTTCCCCTCCACTCTCTGCCCA
CCCCCTCGGAAGGGGTGAAAAATGTTAATTTTAAATGTCAACCACAAACCGAAAGCGCGA
ACCACAAGATAGCAAAGAAAGGATCTAGAGAAAGTATGAGTCTGCGTGTTTGTTTGTGTG
TGTGTGTGTGTGAGAGACAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAA
AGGGAAAGTGACGAGTTTTAGTCCCACAAAAACAAAACAGGAAACTCCAAAACAACCTGT
GGAAATGGTGTGGAAATAGAGAAGGCATGGGAAAGGGTAAAAAATACACAAATAGCTAGG
CGTATGTGAGAGTGTGTGTATGCGTGGTTGTGTGTGCGTATGTATGTGTGTGTGATTGGA
TGAGGAGTGTGAGTGATGTGTGTGTGTGTGTGTGTGGGGGAGGGGGGGGCCAGCCGCCGC
CATCATACCTTCACACACCACGACCCCCACCCATACCGTCACTTTCTTCGGCACACACAC
ACATACACACACAGGCTCAAAAGCGCGATGCGAAACGAATCTATTTACATACACTTTTTT
TTATTAAACTTAGTAAAAACAAACAACAACAAACAAACGAAACGAAACAAAA

consensusID : consensus_7265#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 660
fasta sequence

                              [TTTTTTTTTGGATGGCATGACAAACAGCAACAACAGAGCGGGGGTGTAGTTAAAGGCAGGTTTTTCTAACCCCCAAACTGTAGAGCCACAACAGAACGATCTCTGTTGATGAAGAAAAATGATGTTGACGGTCCCGGTTCGCTTTTTCCACCTATACTTTGTACTAGGCATAGGTACTACAATTTGCCACTTCTTCTTTACATTATTTGCTTGTGTTTGCAAGAACCCAAAAGTGACAGTAATTTTTTTTTACTTGTCAGCTCTTACCACCTTCAATTCTCGGTGGTAGTTGACTCCACACTTTATCAAACACTACACATGCTTATGATGGTGTGCTGGTGATCCGGGTTGGGGCGTCTTTTCTCCTCCAACAACTGTGGCGGCAATGGTGAAGAAAAAGAGTTGATATTGTGTTTTGCAAACGACAACACACGGCAGCCAGCATCCGAAAAAGCAAAATAAAAACCCTCACGCAGGTGTGTCTCTGTTTGTCGCGCGGCGAAAATGAAGGGGGGGGGCCAGCCGCCGCCATCATACCTTCACACACCACGACCCCCACCCATACCGTCACTTTCTTCGGCACACACACACATACACACACAGGCTCAAAAGCGCGATGCGAAACGAATCTATTTACATACACTTTTTTTTATTAAACTT]

[+] EMBL AGA281259            [TTTTTTTTTGGATGGCATGACAAACAGCAACAACAGAGCGGGGGTGTAGTTAAAGGCAGGTTTTTCTAACCCCCAAACTGTAGAGCCACAACAGAACGATCTCTGTTGATGAAGAAAAATGATGTTGACGGTCCCGGTTCGCTTTTTCCACCTATACTTTGTACTAGGCATAGGTACTACAATTTGCCACTTCTTCTTTACATTATTTGCTTGTGTTTGCAAGAACCCAAAAGTGACAGTAATTTTTTTTTACTTGTCAGCTCTTACCACCTTCAATTCTCGGTGGTAGTTGACTCCACACTTTATCAAACACTACACATGCTTATGATGGTGTGCTGGTGATCCGGGTTGGGGCGTCTTTTC                                                                                                                                                                                                                                                                                                         ]
[-] EMBL AGA282880            [                                                                                                                                                                                                                                                                                                                                GCTTATGATGGTGTGCTGGTGAT CGGGTT GGGCGTCTTTTCTCCTCCAACAACTGTGGCGGCAATGGTGAAGAAAAAGAGTTGATATTGTGTTTTGCAAACGACAACACACGGCAGCCAGCATCCGAAAAAGCAAAATAAAAACCCTCACGCAGGTGTGTCTCTGTTTGTCGCGCGGCGAAAATGAAGGGGGGGGGCCAGCCGCCGCCATCATACCTTCACACACCACGACCCCCACCCATACCGTCACTTTCTTCGGCACACACACACATACACACACAGGCTCAAAAGCGCGATGCGAAACGAATCTATTTACATACACTTTTTTTTATTAAACTT]




>consensus_7265#1
TTTTTTTTTGGATGGCATGACAAACAGCAACAACAGAGCGGGGGTGTAGTTAAAGGCAGG
TTTTTCTAACCCCCAAACTGTAGAGCCACAACAGAACGATCTCTGTTGATGAAGAAAAAT
GATGTTGACGGTCCCGGTTCGCTTTTTCCACCTATACTTTGTACTAGGCATAGGTACTAC
AATTTGCCACTTCTTCTTTACATTATTTGCTTGTGTTTGCAAGAACCCAAAAGTGACAGT
AATTTTTTTTTACTTGTCAGCTCTTACCACCTTCAATTCTCGGTGGTAGTTGACTCCACA
CTTTATCAAACACTACACATGCTTATGATGGTGTGCTGGTGATCCGGGTTGGGGCGTCTT
TTCTCCTCCAACAACTGTGGCGGCAATGGTGAAGAAAAAGAGTTGATATTGTGTTTTGCA
AACGACAACACACGGCAGCCAGCATCCGAAAAAGCAAAATAAAAACCCTCACGCAGGTGT
GTCTCTGTTTGTCGCGCGGCGAAAATGAAGGGGGGGGGCCAGCCGCCGCCATCATACCTT
CACACACCACGACCCCCACCCATACCGTCACTTTCTTCGGCACACACACACATACACACA
CAGGCTCAAAAGCGCGATGCGAAACGAATCTATTTACATACACTTTTTTTTATTAAACTT

consensusID : consensus_7265#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 205
fasta sequence

                              [CCGGTTTGTGTGTGTGTGTGTGTGTGAGTGTGAGAGAGAGAGAGAGAGAAAGAAAGGGAAAGTGACGAGTTTTAGTCCCACAAAAACAAAACAGGAAACTCCAGAACAACCTGTGGAAATGGTGTGGAAATAGAGAAGGCATGGGAAAGGGTAAAAAATACACAAATAGCTAGGCGTATGTGAGGGTGTGTGTATGCGTGGTTGT]

[+] EMBL BM643844             [CCGGTTTGTGTGTGTGTGTGTGTGTGAGTGTGAGAGAGAGAGAGAGAGAAAGAAAGGGAAAGTGACGAGTTTTAGTCCCACAAAAACAAAACAGGAAACTCCAGAACAACCTGTGGAAATGGTGTGGAAATAGAGAAGGCATGGGAAAGGGTAAAAAATACACAAATAGCTAGGCGTATGTGAGGGTGTGTGTATGCGTGGTTGT]




>consensus_7265#2
CCGGTTTGTGTGTGTGTGTGTGTGTGAGTGTGAGAGAGAGAGAGAGAGAAAGAAAGGGAA
AGTGACGAGTTTTAGTCCCACAAAAACAAAACAGGAAACTCCAGAACAACCTGTGGAAAT
GGTGTGGAAATAGAGAAGGCATGGGAAAGGGTAAAAAATACACAAATAGCTAGGCGTATG
TGAGGGTGTGTGTATGCGTGGTTGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7265#0      CCGGCAAAAACGGTAACAAAACAAACAAAAAAAACCATGAAAAGAATGAACGAATCACTT 60
consensus_7265#2      ------------------------------------------------------------
consensus_7265#1      ------------------------------------------------------------
                                                                                  

consensus_7265#0      GTGGACACAAAATTGTTTTTAAAACAACCCTTCTAATTTCTCCCAATCCGCCCGCCACAC 120
consensus_7265#2      ------------------------------------------------------------
consensus_7265#1      ------------------------------------------------------------
                                                                                  

consensus_7265#0      TCACCCACACTCAGGAGAGCGTAACAAAGCGCATTACAAAAAGGAGAAAAATAATGTTAC 180
consensus_7265#2      ------------------------------------------------------------
consensus_7265#1      ------------------------------------------------------------
                                                                                  

consensus_7265#0      CGAAAAAGGAAACATCACAACACATTCTAGCACCCATCAGATAGACAGTGATTGGTAGTT 240
consensus_7265#2      ------------------------------------------------------------
consensus_7265#1      ---------------------------------------------------------TTT 3
                                                                                  

consensus_7265#0      CGCCCTTCCAGGAAAAAAAAACAATAACAAAAGATCATACGAATGTCCCTAATTTGACCC 300
consensus_7265#2      ------------------------------------------------------------
consensus_7265#1      TTTTTTGGATGGCATGACAAACAGCAACAACAGAGCGG--GGGTGTAGTTAAAGGCAGGT 61
                                                                                  

consensus_7265#0      CCCCCCCCACCCCCATGGGCATGGGAAAAACGAAACAAACGAAAAATGTAAACAAAAACC 360
consensus_7265#2      ------------------------------------------------------------
consensus_7265#1      TTTTCTAACCCCCAAACTGTAGAGCCACAACAGAACGATCTCTGTTGATGAAGAAAAATG 121
                                                                                  

consensus_7265#0      CTCTAACCACTGTGAGTAGTAGCGCGCGGGTGGCCATCCTTCCCCTCCACTCTCTGCCCA 420
consensus_7265#2      ------------------------------------------------------------
consensus_7265#1      ATGTTGACGGTCCCGGTTCGCTTTTTC---CACCTATACTTTGTACTAGGCATAGGTACT 178
                                                                                  

consensus_7265#0      CCCCCTCGGAAGGGGTGAAAAATGTTAATTTTAAATGTCAACCACAAACCGAAAGCGCGA 480
consensus_7265#2      ------------------------------------------------------------
consensus_7265#1      ACAATTTGCCACTTCTTCTTTACATTATTTGCTTGTGTTTGCAAGAACCCAAAAGTGACA 238
                                                                                  

consensus_7265#0      ACCACAAGATAGCAAAGAAAGGATCTAGAGAAAGTATGAGTCTGCGTGTTTGTTTGTGTG 540
consensus_7265#2      ------------------------------------------------CCGGTTTGTGTG 12
consensus_7265#1      GTAATTTTTTTTTACTTGTCAGCTCTT-ACCACCTTCAATTCTCGGTGGTAGTTGACTCC 297
                                                                         ***      

consensus_7265#0      TGTGTGTGTGTGAGAGACAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAA 600
consensus_7265#2      TGTGTGTGTGT------------------GTGAGTGTGAGAGAGAGAGAGAGAGAAAGAA 54
consensus_7265#1      ACACTTTATCAAACA--------------CTACACATGCTTATGATGGTGTGCTGGTGAT 343
                          * * *                            *     **  * * *     ** 

consensus_7265#0      AGGGAAAGTGACGAGTTTTAGTCCCACAAAAACAAAACAGGAAACTCCAAAACAACCTGT 660
consensus_7265#2      AGGGAAAGTGACGAGTTTTAGTCCCACAAAAACAAAACAGGAAACTCCAGAACAACCTGT 114
consensus_7265#1      CCGGGTTGGGGCGTCTTTTCTCCTCCAACAACTGTGGCGGCAATGGTGAAGAAAAAGAGT 403
                        **   * * **  ****   * *  * **      * * **     *  * **   **

consensus_7265#0      GGAAATGGTGTG--GAAATAGAGAAGGCATGGGAAAGGGTAAAAAATACACAAATAGCTA 718
consensus_7265#2      GGAAATGGTGTG--GAAATAGAGAAGGCATGGGAAAGGGTAAAAAATACACAAATAGCTA 172
consensus_7265#1      TGATATTGTGTTTTGCAAACGACAACACACGGCAGCCAGCATCCGAAAAAGCAAAATAAA 463
                       ** ** ****   * **  ** **  ** ** *    * *    * * *  ** *   *

consensus_7265#0      GGCGTATGTGAGAGTGTGTGTATGCGTGGTTGTGTGTGCGTATGTATGTGTGTGTGATTG 778
consensus_7265#2      GGCGTATGTGAGGGTGTGTGTATGCGTGGTTGT--------------------------- 205
consensus_7265#1      AACCCTCACGCAGGTGTGTCTCTGTTTG-TCGCGCG------------------------ 498
                        *      *   ****** * **  ** * *                            

consensus_7265#0      GATGAGGAGTGTGAGTGATGTGTGTGTGTGTGTGTGTGGGGGAGGGGGGGGCCAGCCGCC 838
consensus_7265#2      ------------------------------------------------------------
consensus_7265#1      -------------------------------GCGAAAATGAAGGGGGGGGGCCAGCCGCC 527
                                                                                  

consensus_7265#0      GCCATCATACCTTCACACACCACGACCCCCACCCATACCGTCACTTTCTTCGGCACACAC 898
consensus_7265#2      ------------------------------------------------------------
consensus_7265#1      GCCATCATACCTTCACACACCACGACCCCCACCCATACCGTCACTTTCTTCGGCACACAC 587
                                                                                  

consensus_7265#0      ACACATACACACACAGGCTCAAAAGCGCGATGCGAAACGAATCTATTTACATACACTTTT 958
consensus_7265#2      ------------------------------------------------------------
consensus_7265#1      ACACATACACACACAGGCTCAAAAGCGCGATGCGAAACGAATCTATTTACATACACTTTT 647
                                                                                  

consensus_7265#0      TTTTATTAAACTTAGTAAAAACAAACAACAACAAACAAACGAAACGAAACAAAA 1012
consensus_7265#2      ------------------------------------------------------
consensus_7265#1      TTTTATTAAACTT----------------------------------------- 660