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Anopheles gambiae
cluster # 7270 cluster # 7270       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7270#0 length = 1015 sequences # 7  

consensusID : consensus_7270#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1015
fasta sequence
                              [CCGCCCACGCGTCCGGGTAGATCGCCAGTACG-AGCGAAACGAAGCATTTTCTGCACAAAATCAATATTTTACGAATATTTTAAAATGTTTTACATTATTGGACTTGGTCTTGGTGATCCGGAGGACATCACC-GTGAAAGCGGCTGAACATAATCAAACAGTGCGAACGCGTTTATTTAGAATCGTACACGTCGGTGCTGTGCTGTGGACAG-GAGAAATTGGAAGAATTCTACGGCAGAAAACTCATTCTAGCTGATCGAGAAATGGTCGAGCAACGGGCCGATGACATCTTGGAGGGAGCCGAAAGTATATCGGTAGCGTTCTTGGTCGTCGGTGATCCGTTTGGCGCTACCACGCACACCGACCTGATGCTTCGAGCGAAGGAAAAAGGCATCAAAACATCGATCGTTCACAATGCTTCAATTATGAATGCCGTGGGTTGCTGTGGACTGCAGTTGTATCATTTCGGTGAAACTGTGTCCAT-TCCATACTGGGACGATAGCTGGAAGCCGGACAGTTTTTACGATAAAATCGTTGCCAATCTGAAACACGGACTGCACACGCTATGCCTTTTAGATATCAAAGTAAAGGAACCAACGTTAGAATCGTTGATGAAGAAAAAGCGCAAATACATGCCGCCACGGTTTATGTCCGTTAGCGAA-CGGCAGACCAGTTGCTGCAGATTGTCGCCAAGAAGTCGGATGAAGAAGCTGGCGTTCAGCCTGACCAGCAAAACGAACACGGGCTACGCGAAAACACGCTTATTGTCGGTCTTGCGCGAGTGGGCCATGACACACAGCAAATTCTAGCATGTTCGCTTAGCGAAATGAGAAACGTCGACCTAGGACCACCGTTACATTCGCTTATCATTCCCAATGGGCAGCTTCATCCGTT-GGAAATGGAATTTCTGCAGCAGTTTGCCGAACTAAAGCAACAAATATTGTGAATCATCGCGATGGTTTTTTGAAATGTAACAAAATGCCGCGTCATTTCCGCTTTGTGGAACAGTTGTTGAA]

[+] EMBL BM612213             [CCGCCCACGCGTCCGGGTAGATCGCCAGTACGAAGCGAAACGAAGCATTTTCTGCACAAAATCAATATTTTACGAATATTTTAAAATGTTTTACATTATTGGACTTGGTCTTGGTGATCCGGAGGACATCACC GTGAAAG GGCTGAACATAATCAAACAGTGCGAACGCGTTTATTTAGAATCGTACACGTCGGTGCTGTGCTGTGGACAG GAGAAATTGGAAGAATTCTACGGCAGAAAACTCATTCTAGCTGATCGAGAAATGGTCGAGCAACGGGCCGATGACATCTTGGAGGGAGCCGAAAGTATATCGGTAGCGTTCTTGGTCGTCGGTGATCCGTTTGGCGCTACCACGCACACCGACCTGATGCTTCGAGCGAAGGAAAAAGGCATCAAAACATCGATCGTTCACAATGCTTCAATTATGAATGCCGTGGGTTGCTGTGGACTGCAGTTGTATCATTTCGGTGAAACTGTGTCCAT TCCATACTGGGACGATAGCTGGAAGCCGGTCAGTTTTTACGATAAAATCGTTGCCAATCTGAAACACGGACTGCACACGCTATGCCTTTTAGATATCAAAGTAAAGGAACCAACGTTAGAATCGTTGA                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS08L2R             [        gtttgccGGTAGATCGCCAGTACG AGCGAAACG AGCATTTTCTGTACAAAATAAATATTTTACGAATATTTTAAAATGTTTTACATTATTGGACTTGGCCTTGGCGATCCGGAGGACATCACC GTGAAAGCGGCTGAACATAATCAAACAGTGCGAACGCGTTTATTTAGAATCGTACACGTCGGTGCTGTGCTGTGGACAGAGAGAAATTGGAAGAATTCTACGGCAGAAAACTCATTCTAGCTGATCGAGAAATGGTCGAGCAACGGGCCGATGACACCCTGGAGGGAGCCGAAAGTGTATCGGTAGCGTTCTTGGTCGTCGGTGATCCGTTTGGCGCTACCACGCACACCGACCTGATGCTTCGAGCGAAGGAAAAAGGCATCAAAACATCGATCGTTCACAATGCTTCAATTATGAATGCCGTGGGTTGCTGTGGACTGCAGTTGTATCATTTCGGTGAAACTGTGTCCATATCCATACTGGGACGATAGCTGGAAGCCGGACAGTTTTTACGATAAAATCGTTGCCAATCTGAAACACGGACTGCACACGCTATGCCTTTTAGATATCAAAGTAAAGGAACCAACGTTAGAATCGTTGATGAAGAAAAAGCGCAAATACATGCCGCCACGGTTTATGTCCGTTAGCGAA                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS08NXA             [                          AGTACG AGCGAAACGAAGCATTTTCTGCACAAAATCAATATTTTACGAATATTTTAAAATGTTTTACATTATTGGACTTGGTCTTGGTGATCCGGAGGACATCACCGGTGAAAGCGGCTGAACATAATCAAACAGTGCGAACGCGTTTATTTAGAATCGTACACGTCGGTGCTGTGCTGTGGACAG GAGAAATTGGAAGAATTCTACGGCAGAAAACTCATTCTAGCTGATCGAGAAATGGTCGAGCAACGGGCCGATGACATCTTGGAGGGAGCCGAAAGTATATCGGTAGCGTTCTTGGTCGTCGGTGATCCGTTTGGCGCTACCACACACACCGACCTGATGCTTCGAGCGAAGGAAAAAGGCATCAAAACATCGATCGTTCACAATGCTTCAATTATGAATGCCGTGGGTTGCTGTGGACTGCAGTTGTATCATTTCGGTGAAACTGTGTCCAT TCCATACTGGGACGATAGCTGGAAGCCGGACAGTTTTTACGATAAAATCGTTGCCAATCTGAAACACGGACTGCACACGCTATGCCTTTTAGATATCAAAGTAAAGGAACCAACGTTAGAATCGTTGATGAAGAAAAAGCGCGAATACATGCCGCCACGGTTTATGTCCGTTAGCGAA CGACAGACCAGTTGCTGCAGATTGTCGCCAAGAAGTCGGATGCAGAAGCTGGCGTTCAGCCTGACCAGCAAAACGAACACGGGCTAAGCGAAAACACGCTTATTGTCGGTCTTGCGCGAGTGGGCCATGACACACAGCAAATTCTAGCATGTTCGCTTAGCGAAATGAGAAACGTCGACCTAGGACCACCGTTACATTCGCTTATCATTCCCAATGGGCAGCTTCATCCGTTGGGAAATGGAATTTC                                                                                                            ]
[+] EMBL CNS09GH7             [                                                                                         TTTACATTATTGGACTTGGCCTTGGCGATCCGGA GACATCACC GTGAAAGCGGCTGAACATAATCAAACAGTGCGAACGCGTTTATTTAGAATCGTACACGTCGGTGCTGTGCTGTGGACAG GAGAAATTGGAAGAATTCTACGGCAGAAAACTCATTCTAGCTGATCGAGAAATGGTCGAGCAACGGGCCGATGACATCTTGGAGGGAGCCGAAAGTGTATCGGTAGCGTTCTTGGTCGTCGGTGATCCGTTTGGCGCTACCACGCACACCGACCTGATGCTTCGAGCGAAGGAAAAAGGCATCAAAACATCGATCGTTCACAATGCTTCAATTATGAATGCCGTGGGTTGCTGTGGACTGCAGTTGTATCATTTCGGTGAAACTGTGTCCAT TCCATACTGGGACGATAGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS09GH8             [                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCGTGGGTTGCTGTGGACTGCAGTTGTATCATTTCGGTGAAACTGTGTCCAT TCCATACTGGGACGATAGCTGGAAGCCGGACAGTTTTTACGATAAAATCGTTGCCAATCTGAAACACGGACTGCACACGCTATGCCTTTTAGATATCAAAGTAAAGGAACCAACGTTAGAATCGTTGATGAAGAAAAAGCGCGAATACATGCCGCCACGGTTTATGTCCGTTAGCGAAGCGGCAGACCAGTTGCTGCAGATTGTCGCCAAGAAGTCGGATGAAGAAGCTGGCGTTCAGCCTGACCAGCAAAACGAACACGGG TACGCGAAAACACGCTTATTGTCGGTCTTGCGCGAGT GGCCATGACACACAGCAAATTCTAGCATGTTCGCTTAGCGAAATGAGAAACGTCGACCTAGGACCACCGTTACATTCGCTTATCATTCCCAATGGGCAGCTTCATCCGTT GGAAATGGAATTTCTGCAGCAGTTTGCCGAACTAAAGCAACAAATATTGTGAATCATCGCGATGGTTTTTTGAAATGTAACAAAATGCCGCGTCATTTCCGCTTTGTGGAACAGTTGTTGAA]
[-] EMBL CNS08L2S             [                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCTGTGAACTGCAGTTGTATCATTTCGGTGAAACTGTGTCCAT TCCAAACTGGGACGATAGCTGGAAGCCGGACAGTTTTTACGATAAAATCGTTGCCAATCTGAAACACGGACTGCACACGCTATGCCTTTTAGATATCAAAGTAAAGGAACCAACGTTAGAATCGTTGATGAAGAAAAAGCGCAAATACATGCCGCCACGGTTTATGTCCGTTAGCGAAGCGGCAGACCAGTTGCTGCAAATTTTCCCCAAGAAGTCGGATGAAGAAGCTGGCGTTCACCCTGACCAGCAAAACGAACAC GGCTACCCGAAAAC                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS08NXB             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GACCTAGGACCCCCGTTACATTCGCTTATCATTCCCAATGGGCAGCTTCATCCGTT GGAAATGGAATTTCTGCAGCAGTTCGCCGAACTAAAGCAACAAATATTGTGAATCATCGCAATGGTT                                                       ]


>consensus_7270#0 CCGCCCACGCGTCCGGGTAGATCGCCAGTACGAGCGAAACGAAGCATTTTCTGCACAAAA TCAATATTTTACGAATATTTTAAAATGTTTTACATTATTGGACTTGGTCTTGGTGATCCG GAGGACATCACCGTGAAAGCGGCTGAACATAATCAAACAGTGCGAACGCGTTTATTTAGA ATCGTACACGTCGGTGCTGTGCTGTGGACAGGAGAAATTGGAAGAATTCTACGGCAGAAA ACTCATTCTAGCTGATCGAGAAATGGTCGAGCAACGGGCCGATGACATCTTGGAGGGAGC CGAAAGTATATCGGTAGCGTTCTTGGTCGTCGGTGATCCGTTTGGCGCTACCACGCACAC CGACCTGATGCTTCGAGCGAAGGAAAAAGGCATCAAAACATCGATCGTTCACAATGCTTC AATTATGAATGCCGTGGGTTGCTGTGGACTGCAGTTGTATCATTTCGGTGAAACTGTGTC CATTCCATACTGGGACGATAGCTGGAAGCCGGACAGTTTTTACGATAAAATCGTTGCCAA TCTGAAACACGGACTGCACACGCTATGCCTTTTAGATATCAAAGTAAAGGAACCAACGTT AGAATCGTTGATGAAGAAAAAGCGCAAATACATGCCGCCACGGTTTATGTCCGTTAGCGA ACGGCAGACCAGTTGCTGCAGATTGTCGCCAAGAAGTCGGATGAAGAAGCTGGCGTTCAG CCTGACCAGCAAAACGAACACGGGCTACGCGAAAACACGCTTATTGTCGGTCTTGCGCGA GTGGGCCATGACACACAGCAAATTCTAGCATGTTCGCTTAGCGAAATGAGAAACGTCGAC CTAGGACCACCGTTACATTCGCTTATCATTCCCAATGGGCAGCTTCATCCGTTGGAAATG GAATTTCTGCAGCAGTTTGCCGAACTAAAGCAACAAATATTGTGAATCATCGCGATGGTT TTTTGAAATGTAACAAAATGCCGCGTCATTTCCGCTTTGTGGAACAGTTGTTGAA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)