Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7339 cluster # 7339       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7339#0 length = 1212 sequences # 2  
consensus_7339#1 length = 1049 sequences # 3  
consensus_7339#2 length = 670 sequences # 1  
consensus_7339#3 length = 386 sequences # 1  

consensusID : consensus_7339#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1212
fasta sequence
                              [CCGCGGACGCGTGGGCGCATTCAAAGAGAGTTGCACACTGTATCGAGTAAGCACACCGATATAAAAAAGCACACACAAACACACACTTTACTTTTATCAAATCGATAGTTCTTTCCAACGGAATATATGACAACAGGACGAGCGAAAGTATAAGAGCCTTGGAAGTATGGGCATGAACGATAGCGTACAGGTTTTCGATCCCAGCGATCGAGACACAAGAACACGAACAAAATGGTTTGCTTCCGAGCAAATGGGATTTGCTTAAACATCGCTCATCCCTCAAAAACACACACACACACACACTCGATGATGCTCGATGATAACATCTTGCTAGTGATATACAGTTGTTCATGAAAAGGCGCTTGCACACACACACATACAGTCACCACGATTGTAATTACGTTGAGATTCTGCAAAGTCTTTTTGTTTACAATCTATTGCAAAAGTGTTGTTAATTACCTTGACATACAGAGAGAATATGATTGACACAGAAGGGTTTCAGTTGGTTAATATCAATTGTCAATCAGCGGATGGAATTATCTCCACCTCAGCTGTGGTACGTACCATTCGTTTGTACGTGCGTGTAGCGTGTTTTCTATTGCTTTAAGCGTATCTAACAAATGCATTCTCCTGGTGCGCGCCTTCCCGTTCCGTGTTATATATTTGCGCAAACACCCAGTTTAACTCTTTATATACAACCTCCCGGATCGCCAGTAAGACTGAAGAGGCAATTTATAAATTCACTATGTTTTTTTTTTCACATCAATCCCCCACTTCATCTCCCAAACACGAAAGCGTTATATTGTACATAACGGTGGCAGTGGGTGAAATGCTTTTTTTCTCATTTGCAATCTATCTATTACATTCTTTCAATTCTAAATTGCAAAAAAAAAGATAAACAACCTGCCTCTTCCTGCCATGTTAAGAAATTACTGTGGGGAACGGTGGTAGAGGCTTACTTTCATTGGAGTCCCTTTTCCTATATTCAATTTTATCTGTTTCGGTTTTTATTTTTGGAATTGGAAAATGTACTAGCTTTTATCAGCGCGAGCAATTGTTTTAGTGTGCGCAAGTGTGTGTGTGTGTGTGTGTGTTTTCGGCACAACTCAGAAAAGGGAAGAAAAATGTACGTAACTTATACCGTCGCACAAATACAATGCAACCAGACAAAGAACATCGAAACATCTAAATGCTCAAAATGCTTTCTTTTTC]

[+] EMBL BM605780             [CCGCGGACGCGTGGGCGCATTCAAAGAGAGTTGCACACTGTATCGAGTAAGCACACCGATATAAAAAAGCACACACAAACACACACTTTACTTTTATCAAATCGATAGTTCTTTCCAACGGAATATATGACAACAGGACGAGCGAAAGTATAAGAGCCTTGGAAGTATGGGCATGAACGATAGCGTACAGGTTTTCGATCCCAGCGATCGAGACACAAGAACACGAACAAAATGGTTTGCTTCCGAGCAAATGGGATTTGCTTAAACATCGCTCATCCCTCAAAAACACACACACACACACACTCGATGATGCTCGATGATAACATCTTGCTAGTGATATACAGTTGTTCATGAAAAGGCGCTTGCACACACACACATACAGTCACCACGATTGTAATTACGTTGAGATTCTGCAAAGTCTTTTTGTTTACAATCTATTGCAAAAGTGTTGTTAATTACCTTGACATACAGAGAGAATATGATTGACACAGAAGGGTTTCAGTTGGTTAATATCAATTGTCAATCAGCGGATGGAATTATCTCCACCTCAGCTGTGGTACGTACCATTCGTTTGTACGTGCGTGTAGCGTGTTTTCTATTGCTTTAAGCGTATCTAACAAATGCATTCTCCTGGTGCGCGCCTTCCCGTTCCGTGTTATATATTTGCGCAAACACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM601597             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              cCGCACCATTCGGTTGTACGTGCGTGAAGCGTGTTTTCTATTGCTTTAAGCGTATCTAACAGATGCATTCTCCTGGTGCGCGCCTTCCCGTTCCGTGTTATATATTTGCGCAAACACCCAGTTTAACTCTTTATATACAACCTCCCGGATCGCCAGTAAGACTGAAGAGGCAATTTATAAATTCACTATGTTTTTTTTTTCACATCAATCCCCCACTTCATCTCCCAAACACGAAAGCGTTATATTGTACATAACGGTGGCAGTGGGTGAAATGCTTTTTTTCTCATTTGCAATCTATCTATTACATTCTTTCAATTCTAAATTGCAAAAAAAAAGATAAACAACCTGCCTCTTCCTGCCATGTTAAGAAATTACTGTGGGGAACGGTGGTAGAGGCTTACTTTCATTGGAGTCCCTTTTCCTATATTCAATTTTATCTGTTTCGGTTTTTATTTTTGGAATTGGAAAATGTACTAGCTTTTATCAGCGCGAGCAATTGTTTTAGTGTGCGCAAGTGTGTGTGTGTGTGTGTGTGTTTTCGGCACAACTCAGAAAAGGGAAGAAAAATGTACGTAACTTATACCGTCGCACAAATACAATGCAACCAGACAAAGAACATCGAAACATCTAAATGCTCAAAATGCTTTCTTTTTC]


>consensus_7339#0 CCGCGGACGCGTGGGCGCATTCAAAGAGAGTTGCACACTGTATCGAGTAAGCACACCGAT ATAAAAAAGCACACACAAACACACACTTTACTTTTATCAAATCGATAGTTCTTTCCAACG GAATATATGACAACAGGACGAGCGAAAGTATAAGAGCCTTGGAAGTATGGGCATGAACGA TAGCGTACAGGTTTTCGATCCCAGCGATCGAGACACAAGAACACGAACAAAATGGTTTGC TTCCGAGCAAATGGGATTTGCTTAAACATCGCTCATCCCTCAAAAACACACACACACACA CACTCGATGATGCTCGATGATAACATCTTGCTAGTGATATACAGTTGTTCATGAAAAGGC GCTTGCACACACACACATACAGTCACCACGATTGTAATTACGTTGAGATTCTGCAAAGTC TTTTTGTTTACAATCTATTGCAAAAGTGTTGTTAATTACCTTGACATACAGAGAGAATAT GATTGACACAGAAGGGTTTCAGTTGGTTAATATCAATTGTCAATCAGCGGATGGAATTAT CTCCACCTCAGCTGTGGTACGTACCATTCGTTTGTACGTGCGTGTAGCGTGTTTTCTATT GCTTTAAGCGTATCTAACAAATGCATTCTCCTGGTGCGCGCCTTCCCGTTCCGTGTTATA TATTTGCGCAAACACCCAGTTTAACTCTTTATATACAACCTCCCGGATCGCCAGTAAGAC TGAAGAGGCAATTTATAAATTCACTATGTTTTTTTTTTCACATCAATCCCCCACTTCATC TCCCAAACACGAAAGCGTTATATTGTACATAACGGTGGCAGTGGGTGAAATGCTTTTTTT CTCATTTGCAATCTATCTATTACATTCTTTCAATTCTAAATTGCAAAAAAAAAGATAAAC AACCTGCCTCTTCCTGCCATGTTAAGAAATTACTGTGGGGAACGGTGGTAGAGGCTTACT TTCATTGGAGTCCCTTTTCCTATATTCAATTTTATCTGTTTCGGTTTTTATTTTTGGAAT TGGAAAATGTACTAGCTTTTATCAGCGCGAGCAATTGTTTTAGTGTGCGCAAGTGTGTGT GTGTGTGTGTGTGTTTTCGGCACAACTCAGAAAAGGGAAGAAAAATGTACGTAACTTATA CCGTCGCACAAATACAATGCAACCAGACAAAGAACATCGAAACATCTAAATGCTCAAAAT GCTTTCTTTTTC



consensusID : consensus_7339#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1049
fasta sequence
                              [ACGAGCG-AAGTATAAGAGCCTCGGAAGTATGGGCATGAACGGTAGCGTACAGGTTTTCGATCCCAGCGATCGAGACACAAGAACACGAACAAAACGATTTGCTTCCGAGCAAATGGGATTTGCTTAAACATCGCTCATCCCTCAAAACACACACACACACTCGATGATAACACCTTTCTAGTGATACACAGTTGTTTATGGAAAGGCGCTTGCACACACACACATACAGTCACCACGATTGTAATTACGTTGAGATTCTGTCGAGATCTTTTGCAAAAGTGTTGTTAATTACCTTGACATACAGAGAGAATACGATTGACACAGAAGGGTTTCAGTTGGTTAACATCAATTGTCACCCAGTTGTACTTTTCAATCTGTTGATATCTGTTCTAATGTATAGCGGATGGAATTATTCCCACCTCAGCGTTGGTACGTACCATTCGTTTGTACGTGCGTGAAGCGTGTTTTCTATTGCTTAAAGCGTATCCAACAAATGCGCGCTCTCCCCGTCACGTGTTATATATTTGCGCAAACACCCAGTTTTACTCTTTATATACAACCACCCGGAACGCCAGTAAGACTGAAGAGGCAATTTATAAATTCATTATGTTTTCTCTTCTTTTTACATCAATCCCCCACTTACACATCCCCCCCCAACACGAAAGCTTTATATTGTACATAACGGTGGCAGTGG-GTGAAATGCTTTTTTTTCTCATTTGCAATCAATCTATTACTTTCTTTCAGTTCTAAATTGCAAAAAAAAAGAAAAGTCAAACAACCTGCCCCTCCCCCTGCCATGTAAAGAAATTGTACTGTGGGGAATGGTGGTGGGGGCTTACTTTCATTGGAGTCCCTTTTTCTATATTCGATTTGATCTGTTTCGGTTTTAATTTTGGAATTGGAAAATGTACTAGCTTTTATCAGCGCGAGCAATTGTTTTAGGTGTTTGTTTGTGTGTGTGTGTGTGTGTTTTTTGGCACAACTCAGAAAAGGGAAGAAAAGCCTTCTCATAGAAACATACGAATGTACGTAACTTTTACCGTCGCACA]

[+] EMBL CNS08OR6             [ACGAGCG AAGTATAAGAGCCTCGGAAGTATGGGCATGAACGGTAGCGTACAGGTTTTCGATCCCAGCGATCGAGACACAAGAACACGAACAAAACGATTTGCTTCCGAGCAAATGGGATTTGCTTAAACATCGCTCATCCCTCAAAACACACACACACACTCGATGATAACACCTTTCTAGTGATACACAGTTGTTTATGGAAAGGCGCTTGCACACACACACATACAGTCACCACGATTGTAATTACGTTGAGATTCTGTCGAGATCTTTTGCAAAAGTGTTGTTAATTACCTTGACATACAGAGAGAATACGATTGACACAGAAGGGTTTCAGTTGGTTAACATCAATTGTCACCCAGTTGTACTTTTCAATCTGTTGATATCTGTTCTAATGTATAGCGGATGGAATTATTCCCACCTCAGCGTTGGTACGTACCATTCGTTTGTACGTGCGTGAAGCGTGTTTTCTATTGCTTAAAGCGTATCCAACAAATGCGCGCTCTCCCCGTCACGTGTTATATATTTGCGCAAACACCCAGTTTTACTCTTTATATACAACCACCGGGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08TK1             [  GAGCGAAAGTATAAGAGCCTCGGAAGTATGGGCATGAACGGTAGCGTACAGGTTTTCGATCCCAGCGATCGAGACACAAGAACACGAACAAAACGATTTGCTTCCGAGCAAATGGGATTTGCTTAAACATCGCTCATCCCTCAAAACACACACACACACTCGATGATAACACCTTTCTAGTGATACACAGTTGTTTATGGAAAGGCGCTTGCACACACACACATACAGTCACCACGATTGTAATTACGTTGAGATTCTGTCGAGATCTTTTGCAAAAGTGTTGTTAATTACCTTGACATACAGAGAGAATACGATTGACACAGAAGGGTTTCAGTTGGTTAACATCAATTTTCACCCAGTTGTACTTTTCAATCTGTTGATATCTGTTCTAATGTATAGCGGATGGAATTATTCCCACCTCAGCGTTGGTACGTACCATTCGTTTGTACGTGCGTAAAGCGTGTTTTCTATTGCTTAAAGCGTATCCAACAAATGCGCGCTCTCCCCGTCACGTGTTATATATTTGCGCAAACACCCAGTTTTACTCTTTATATACAACCACCCGGAACGCCAGTAAGACTGAAGAGGCAATTTATAAATTCATTATGTTTTCTCTTCTTTTTACATCAATCCCCCACTTACACATCCCCCCCCAACACGAAAGCTTTATATTGTACATAACGGTGGCAGTGG GTGAAATGCTTTTTTTTCTCATTTGCAATCAATCTATTACTTTCTTTCAGTTCTAAATTGCAAAAAAAAAGAAAAGTCAAACAACCTGCCCCTCCCCCTGCCATGTAAAGAAATTGTACTGTGGGGAATGGTGGTGGGGGCTTACTTTCATTGGAGTCCCTTTTTCTATATTCGATTTGATCTGTTTCGGTTTTAATTTTGGAATTGGAAAATGTACTAGCTTTTATCAGCGCGAGCAATTGTTTTAGGTGTTTGTTTGTGTGTGTGTGTGTGTGTTTTTTGGCACAACTCAGAAAAGG                                                        ]
[-] EMBL CNS08TK2             [                                                                                                                                                                                                                         aACACACATACAGTCACCACGATTGTAATTACGTTGAGATTCTGTCGAGATCTTTTGCAAAAGTGTTGTTAATTACCTTTACATACAGAGAGAATACGATTTACACAGAAGGGTTTCAGTTGGTTTACATCAATTGTCACCCAGTTGTACTTTTCAATCTGTTGATATCTGTTCTAATGTATAGCGGATGGAATTATTCCCACCTCAGCGTTGGTACGTACCATTCGTTTGTACGTGCGTGAAGCGTGTTTTTTATTGCTTAAAGCGTATCCAACAAATGCGCGCTCTCCCCGTCACGTGTTATATATTTGCGCAAACACCCAGTTTTACTCTTTATATACAACCACCCGGAACGCCAGTAAGACTGAAGAGGCAATTTATAAATTCATTATGTTTTTTCTTCTTTTTACATCAATCCCCCACTTACACATCCCCCCCCAACACGAAAGCTTTATATTGTACATAACGGTGGCAGTGGAAAGAAATGCTTTTTTTTCTCATTTGCAATCAATCTATTACTTTCTTTCAGTTCTAAATTGCAAAAAAAAAGAAAAGTCAAACAACCTGCCCCTCCCCCTGCCATGTAAAGAAATTGTACTGTGGGGAATGGTGGTGGGGGCTTACTTTCATTGGAGTCCCTTTTTCTATATTCGATTTGATCTGTTTCGGTTTTAATTTTGGAATTGGAAAATGTACTAGCTTTTATCAGCGCGAGCAATTGTTTTAGGTGTTTGTTTGTGTGTGTGTGTGTGTGTGTTTTGGCACAACTCAGAAAAGGGAAGAAAAGCCTTCTCATAGAAACATACGAATGTACGTAACTTTTACCGTCGCACA]


>consensus_7339#1 ACGAGCGAAGTATAAGAGCCTCGGAAGTATGGGCATGAACGGTAGCGTACAGGTTTTCGA TCCCAGCGATCGAGACACAAGAACACGAACAAAACGATTTGCTTCCGAGCAAATGGGATT TGCTTAAACATCGCTCATCCCTCAAAACACACACACACACTCGATGATAACACCTTTCTA GTGATACACAGTTGTTTATGGAAAGGCGCTTGCACACACACACATACAGTCACCACGATT GTAATTACGTTGAGATTCTGTCGAGATCTTTTGCAAAAGTGTTGTTAATTACCTTGACAT ACAGAGAGAATACGATTGACACAGAAGGGTTTCAGTTGGTTAACATCAATTGTCACCCAG TTGTACTTTTCAATCTGTTGATATCTGTTCTAATGTATAGCGGATGGAATTATTCCCACC TCAGCGTTGGTACGTACCATTCGTTTGTACGTGCGTGAAGCGTGTTTTCTATTGCTTAAA GCGTATCCAACAAATGCGCGCTCTCCCCGTCACGTGTTATATATTTGCGCAAACACCCAG TTTTACTCTTTATATACAACCACCCGGAACGCCAGTAAGACTGAAGAGGCAATTTATAAA TTCATTATGTTTTCTCTTCTTTTTACATCAATCCCCCACTTACACATCCCCCCCCAACAC GAAAGCTTTATATTGTACATAACGGTGGCAGTGGGTGAAATGCTTTTTTTTCTCATTTGC AATCAATCTATTACTTTCTTTCAGTTCTAAATTGCAAAAAAAAAGAAAAGTCAAACAACC TGCCCCTCCCCCTGCCATGTAAAGAAATTGTACTGTGGGGAATGGTGGTGGGGGCTTACT TTCATTGGAGTCCCTTTTTCTATATTCGATTTGATCTGTTTCGGTTTTAATTTTGGAATT GGAAAATGTACTAGCTTTTATCAGCGCGAGCAATTGTTTTAGGTGTTTGTTTGTGTGTGT GTGTGTGTGTTTTTTGGCACAACTCAGAAAAGGGAAGAAAAGCCTTCTCATAGAAACATA CGAATGTACGTAACTTTTACCGTCGCACA



consensusID : consensus_7339#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 670
fasta sequence
                              [CCGCCCACGCGTCCGCAAAAACACACACTCACACACACTCGATGATAACATCTTGCTAGTGATATACAGTTGTTTATGGAAAGGCGCTTGCACTCACACACACACATACAGTCACCACGATTGTAATTACGTTGAGATTCTGTCGAGTCTTTTGTTTTACAATCTATTGCAAAAATGTTATTAATTACCTTGACATACAGAGAGAATACGATTGAAACAGAAGGGTTTCAGTTGGTTAACATCAATTGTCAACCAGTTGTACTTTTCAATCTGTTGATATCTGTTCTAATGTATAGCGGATGGAATTATCCCCACCTCAGCGGTGGTACGTACCATTCGTTTGTACGTGCGTGAAGCGTGTTTTCTATTGCTTAAAGCGTATCCAACAAATGCGCGCTCTCCCCGTCACGTGTTATATATTTGCGCAAACACCCAGTTTTACTCTTTATATACAACCACCCGGAACGCCAGTAAGACTGAAGAGGCAACTTATAAATTCATTATGTTTTCTCTTCTTTTTACATCAATCCCCCCACTTACACATCCCCCCCAACACGAAAGCTTTATATTGTACATAACGGTGGCAGTGGGTGAAATGCTTTTTTTCTCATTTGCAATCAATCTATTACTTTCTTTCAGTTCTAAATTGCAAAAAAAGAAAAGTCAAACA]

[+] EMBL BM609571             [CCGCCCACGCGTCCGCAAAAACACACACTCACACACACTCGATGATAACATCTTGCTAGTGATATACAGTTGTTTATGGAAAGGCGCTTGCACTCACACACACACATACAGTCACCACGATTGTAATTACGTTGAGATTCTGTCGAGTCTTTTGTTTTACAATCTATTGCAAAAATGTTATTAATTACCTTGACATACAGAGAGAATACGATTGAAACAGAAGGGTTTCAGTTGGTTAACATCAATTGTCAACCAGTTGTACTTTTCAATCTGTTGATATCTGTTCTAATGTATAGCGGATGGAATTATCCCCACCTCAGCGGTGGTACGTACCATTCGTTTGTACGTGCGTGAAGCGTGTTTTCTATTGCTTAAAGCGTATCCAACAAATGCGCGCTCTCCCCGTCACGTGTTATATATTTGCGCAAACACCCAGTTTTACTCTTTATATACAACCACCCGGAACGCCAGTAAGACTGAAGAGGCAACTTATAAATTCATTATGTTTTCTCTTCTTTTTACATCAATCCCCCCACTTACACATCCCCCCCAACACGAAAGCTTTATATTGTACATAACGGTGGCAGTGGGTGAAATGCTTTTTTTCTCATTTGCAATCAATCTATTACTTTCTTTCAGTTCTAAATTGCAAAAAAAGAAAAGTCAAACA]


>consensus_7339#2 CCGCCCACGCGTCCGCAAAAACACACACTCACACACACTCGATGATAACATCTTGCTAGT GATATACAGTTGTTTATGGAAAGGCGCTTGCACTCACACACACACATACAGTCACCACGA TTGTAATTACGTTGAGATTCTGTCGAGTCTTTTGTTTTACAATCTATTGCAAAAATGTTA TTAATTACCTTGACATACAGAGAGAATACGATTGAAACAGAAGGGTTTCAGTTGGTTAAC ATCAATTGTCAACCAGTTGTACTTTTCAATCTGTTGATATCTGTTCTAATGTATAGCGGA TGGAATTATCCCCACCTCAGCGGTGGTACGTACCATTCGTTTGTACGTGCGTGAAGCGTG TTTTCTATTGCTTAAAGCGTATCCAACAAATGCGCGCTCTCCCCGTCACGTGTTATATAT TTGCGCAAACACCCAGTTTTACTCTTTATATACAACCACCCGGAACGCCAGTAAGACTGA AGAGGCAACTTATAAATTCATTATGTTTTCTCTTCTTTTTACATCAATCCCCCCACTTAC ACATCCCCCCCAACACGAAAGCTTTATATTGTACATAACGGTGGCAGTGGGTGAAATGCT TTTTTTCTCATTTGCAATCAATCTATTACTTTCTTTCAGTTCTAAATTGCAAAAAAAGAA AAGTCAAACA



consensusID : consensus_7339#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 386
fasta sequence
                              [CTGCGCGCTAGAAATGCTTTTTTTTCTCATTTGCAATCAATCTATTACTTTCTTTCAGTTCTAAATTGCAAAAAAAAAGAAAAGTCAAACAACCTGCCCCTCCCCCTGCCATGTAAAGAAATTGTACTGTGGGGAATGGTGGTGGGGGCTTACTTTCATTGGAGTCCCTTTTTCTATATTCGATTTGATCTGTTTCGGTTTTAATTTTGGAATTGGAAAATGTACTAGCTTTTATCAGCGCGAGCAATTGTTTTAGGTGTTTGTTTGTGTGTGTGTGTGTGTGTGTTTTGGCACAACTCAGAAAAGGGAAGAAAAGCCTTCTCATAGAAACATACGAATGTACGTAACTTTTACCGTCGCACAAATATGTACAGAACAGACAAAAA]

[-] EMBL CNS08OR7             [CTGCGCGCTAGAAATGCTTTTTTTTCTCATTTGCAATCAATCTATTACTTTCTTTCAGTTCTAAATTGCAAAAAAAAAGAAAAGTCAAACAACCTGCCCCTCCCCCTGCCATGTAAAGAAATTGTACTGTGGGGAATGGTGGTGGGGGCTTACTTTCATTGGAGTCCCTTTTTCTATATTCGATTTGATCTGTTTCGGTTTTAATTTTGGAATTGGAAAATGTACTAGCTTTTATCAGCGCGAGCAATTGTTTTAGGTGTTTGTTTGTGTGTGTGTGTGTGTGTGTTTTGGCACAACTCAGAAAAGGGAAGAAAAGCCTTCTCATAGAAACATACGAATGTACGTAACTTTTACCGTCGCACAAATATGTACAGAACAGACAAAAA]


>consensus_7339#3 CTGCGCGCTAGAAATGCTTTTTTTTCTCATTTGCAATCAATCTATTACTTTCTTTCAGTT CTAAATTGCAAAAAAAAAGAAAAGTCAAACAACCTGCCCCTCCCCCTGCCATGTAAAGAA ATTGTACTGTGGGGAATGGTGGTGGGGGCTTACTTTCATTGGAGTCCCTTTTTCTATATT CGATTTGATCTGTTTCGGTTTTAATTTTGGAATTGGAAAATGTACTAGCTTTTATCAGCG CGAGCAATTGTTTTAGGTGTTTGTTTGTGTGTGTGTGTGTGTGTGTTTTGGCACAACTCA GAAAAGGGAAGAAAAGCCTTCTCATAGAAACATACGAATGTACGTAACTTTTACCGTCGC ACAAATATGTACAGAACAGACAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7339#1      ACGAGCGAAGTATAAGAGCCTCGGAAGTATGGGCATGAACGGTAGCGTACAGGTTTTCGA 60
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      ------------------------------------------------------------
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      TCCCAGCGATCGAGACACAAGAACACGAACAAAACGATTTGCTTCCGAGCAAATGGGATT 120
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      ------------------------------------------------------------
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      TGCTTAAACATCGCTCATCCCTCAAAACACACACACACACTCGATGATAACACCTTTCTA 180
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      ------------------------------------------------------------
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      GTGATACACAGTTGTTTATGGAAAGGCGCTTGCACACACACACATACAGTCACCACGATT 240
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      ------------------------------------------------------------
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      GTAATTACGTTGAGATTCTGTCGAGATCTTTTGCAAAAGTGTTGTTAATTACCTTGACAT 300
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      ------------------------------------------------------------
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      ACAGAGAGAATACGATTGACACAGAAGGGTTTCAGTTGGTTAACATCAATTGTCACCCAG 360
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      ------------------------------------------------------------
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      TTGTACTTTTCAATCTGTTGATATCTGTTCTAATGTATAGCGGATGGAATTATTCCCACC 420
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      ---CCGCGGACGCGTGGGCGCATTCAAAGAGAGTTGCACACTGTATCGAGTAAGCACACC 57
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      TCAGCGTTGGTACGTACCATTCGTTTGTACGTGCGTGAAGCGTGTTTTCTATTGCTTAAA 480
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      GATATAAAAAAGCACACACAAACACACACTTTACTTTTATCAAATCGATAGTTCTTTCCA 117
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      GCGTATCCAACAAATGCGCGCTCTCCCCGTCACGTGTTATATATTTGCGCAAACACCCAG 540
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      ACGGAATATATGACAACAGGACGAGCGAAAGTATAAGAGCCTTGGAAGTATGGGCATGAA 177
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      TTTTACTCTTTATATACAACCACCCGGAACGCCAGTAAGACTGAAGAGGCAATTTATAAA 600
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      CGATAGCGTACAGGTTTTCGATCCCAGCGATCGAGACACAAGAACACGAACAAAATGGTT 237
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      TTCATTATGTTTTCTCTTCTTTTTACATCAATCCCCCACTTACACATCCCCCCCCAACAC 660
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      TGCTTCCGAGCAAATGGGATTTGCTTAAACATCGCTCATCCCTCAAAAACACACACACAC 297
consensus_7339#2      --------------------------------------CCGCCCACGCGTCCGCAAAAAC 22
                                                                                  

consensus_7339#1      GAAAGCTTTATATTGTACATAACGGTGGCAGTGGGTG--AAATGCTTTTTTTTCT----- 713
consensus_7339#3      -------------------------CTGC-GCGCTAG--AAATGCTTTTTTTTCT----- 27
consensus_7339#0      ACACACTCGATGATGCTCGATGATAACATCTTGCTAGTGATATACAGTTGTTCATGAAAA 357
consensus_7339#2      ACACACTCACACACACTCGATGATAACATCTTGCTAGTGATATACAGTTGTTTATGGAAA 82
                                                      *   *  * ** *  ** **  *     

consensus_7339#1      --CATTTGCAATCAATCTATTACTTTCTTTCAGTTCTAAATTGCAAAAAAAAAGAAAAGT 771
consensus_7339#3      --CATTTGCAATCAATCTATTACTTTCTTTCAGTTCTAAATTGCAAAAAAAAAGAAAAGT 85
consensus_7339#0      GGCGCTTGCAC----ACACACACATACAGTCA--CCACGATTGTAATTACGTTGAGATTC 411
consensus_7339#2      GGCGCTTGCACTCACACACACACATACAGTCA--CCACGATTGTAATTACGTTGAGATTC 140
                        *  *****      *    ** * *  ***   *   **** **  *    ** *   

consensus_7339#1      CAAACAACCTGCCCCTCCCCCTGCCAT-GTAAAGAAATTGT--ACTGTGGGGAATGGTGG 828
consensus_7339#3      CAAACAACCTGCCCCTCCCCCTGCCAT-GTAAAGAAATTGT--ACTGTGGGGAATGGTGG 142
consensus_7339#0      TGCAAAGTCTTTTTGTTTACAATCTATTGCAAAAGTGTTGTTAATTACCTTGACATACAG 471
consensus_7339#2      TGTCGAGTCTTTTGTTTTACAATCTATTGCAAAAATGTTATTAATTACCTTGACATACAG 200
                           *  **     *   *   * ** * ***    ** *  * *     **      *

consensus_7339#1      TGGGGGCTTACTTTCATTGGAG----TCCCTTTTTCTATATTCGATT--TGATCTGTTTC 882
consensus_7339#3      TGGGGGCTTACTTTCATTGGAG----TCCCTTTTTCTATATTCGATT--TGATCTGTTTC 196
consensus_7339#0      AGAGAATATGATTGACACAGAAGGGTTTCAGTTGGTTAATATCAATTGTCAATCAG---- 527
consensus_7339#2      AGAGAATACGATTGAAACAGAAGGGTTTCAGTTGGTTAACATCAATTGTCAACCAGTTGT 260
                       * *       **      **     * *  **   **   ** ***    * * *    

consensus_7339#1      GGTTTT-AATTT--TGGAAT---------TGGAAAATGTACTAGCTTTTATCAGCGCGAG 930
consensus_7339#3      GGTTTT-AATTT--TGGAAT---------TGGAAAATGTACTAGCTTTTATCAGCGCGAG 244
consensus_7339#0      ------------------------------------CGGATGGAATTATCTCCACCTCAG 551
consensus_7339#2      ACTTTTCAATCTGTTGATATCTGTTCTAATGTATAGCGGATGGAATTATCCCCACCTCAG 320
                                                           * *     ** *  *  *   **

consensus_7339#1      CAATTGTTTTAGGTGTTTGTTTGTGTGTGTGTGT-GTGTGTTTTTTGGCAC----AACTC 985
consensus_7339#3      CAATTGTTTTAGGTGTTTGTTTGTGTGTGTGTGT-GTGTGTGTTTTGGCAC----AACTC 299
consensus_7339#0      CTGTGGTACGTACCATTCGTTTGTACGTGCGTGTAGCGTGTTTTCTATTGCTTTAAGCGT 611
consensus_7339#2      CGGTGGTACGTACCATTCGTTTGTACGTGCGTGAAGCGTGTTTTCTATTGCTTAAAGCGT 380
                      *  * **        ** ******  *** ***  * **** ** *    *    * *  

consensus_7339#1      AGAAAAGGGAAGAAAAGCC------------TTCTCAT--------AGAAACATACGAAT 1025
consensus_7339#3      AGAAAAGGGAAGAAAAGCC------------TTCTCAT--------AGAAACATACGAAT 339
consensus_7339#0      ATCTAACAAATGCATTCTCCTGGTGCGCGCCTTCCCGTTCCGTGTTATATATTTGCGCAA 671
consensus_7339#2      ATCCAACAAATGCGCGCTC------------TCCCCGTCACGTGTTATATATTTGCGCAA 428
                      *   **   * *      *            * * * *        * * *  * ** * 

consensus_7339#1      GTACGTAACTTTTACCGTCGCACA------------------------------------ 1049
consensus_7339#3      GTACGTAACTTTTACCGTCGCACAAATATGTACAGAACAGACAAAAA------------- 386
consensus_7339#0      ACACCCAGTTTAACTCTTTATATACAACCTCCCGGATC-GCCAGTAAGACTGAAGAGGCA 730
consensus_7339#2      ACACCCAGTTTTACTCTTTATATACAACCACCCGGAAC-GCCAGTAAGACTGAAGAGGCA 487
                        **  *  **    * *   * *                                    

consensus_7339#1      ------------------------------------------------------------
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      ATTTATAAATTCACTATGTTTTTT----TTTTCACATCAATCCCCC-ACTT---CATCTC 782
consensus_7339#2      ACTTATAAATTCATTATGTTTTCTCTTCTTTTTACATCAATCCCCCCACTTACACATCCC 547
                                                                                  

consensus_7339#1      ------------------------------------------------------------
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      CCA-AACACGAAAGCGTTATATTGTACATAACGGTGGCAGTGGGTGAAATGCTTTTTTTC 841
consensus_7339#2      CCCCAACACGAAAGCTTTATATTGTACATAACGGTGGCAGTGGGTGAAATGCTTTTTTTC 607
                                                                                  

consensus_7339#1      ------------------------------------------------------------
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      TCATTTGCAATCTATCTATTACATTCTTTCAATTCTAAATTGCAAAAAAAAAGATAAACA 901
consensus_7339#2      TCATTTGCAATCAATCTATTACTTTCTTTCAGTTCTAAATTGCAAAAAAAGAAA-AGTCA 666
                                                                                  

consensus_7339#1      ------------------------------------------------------------
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      ACCTGCCTCTTCCTGCCATGTTAAGAAATTACTGTGGGGAACGGTGGTAGAGGCTTACTT 961
consensus_7339#2      AACA-------------------------------------------------------- 670
                                                                                  

consensus_7339#1      ------------------------------------------------------------
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      TCATTGGAGTCCCTTTTCCTATATTCAATTTTATCTGTTTCGGTTTTTATTTTTGGAATT 1021
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      ------------------------------------------------------------
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      GGAAAATGTACTAGCTTTTATCAGCGCGAGCAATTGTTTTAGTGTGCGCAAGTGTGTGTG 1081
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      ------------------------------------------------------------
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      TGTGTGTGTGTGTTTTCGGCACAACTCAGAAAAGGGAAGAAAAATGTACGTAACTTATAC 1141
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      ------------------------------------------------------------
consensus_7339#3      ------------------------------------------------------------
consensus_7339#0      CGTCGCACAAATACAATGCAACCAGACAAAGAACATCGAAACATCTAAATGCTCAAAATG 1201
consensus_7339#2      ------------------------------------------------------------
                                                                                  

consensus_7339#1      -----------
consensus_7339#3      -----------
consensus_7339#0      CTTTCTTTTTC 1212
consensus_7339#2      -----------
                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)