These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7371#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1049 fasta sequence [TGTTTTGGGGCGACAACCAGCGGCATTTGTTTATTCGAGAAAAGTTGCAATAAATCGTTAGCTAAAA-A-GAAACGATTATTTCAAAGATTTTGTGGCGTTGTGAATTGGCAAACAATGAAAAG-AAACGGAAGTATTATTCTCACACAAAAAAAGAAAAGGCATATTCAAACCCATTCGGACGATGAGGATGACGATCGCCTATACAACAACGAATCTAACGATGCCGGTCAAGAGCACGAGGATGAGGACGACGATCTAGCCGATGGAAGTGAGGAAGAACATGTTTCGGACGAAGAGGATGGTGACGGGCAGGACTCAAATGAGGAGGAGGAAGAAGACGATGATGTCCGGATGGACTCAAATGAGGAGGAAGATGTGGAAGCCGACGGTGCGAGTGGCGAAGGCGAAGAGGGCAGTGCGCAAAATGATGACGGAGATGAGGCCACCGAAGAAAGCAGCTCTGCCAAAATTCCAACCCCACGCAACAAGGTGAAACGAGTGAAACCTTTGGTAAAGACAAAGCAAAAGAAAACGGGCGTAATATACATCAGCTCCATTCCAAAGCATATGAATGTGACGATCCTGCGATCGTTGCTGGAACCGTTCGGCGACCTCGGACGCATTTTCCTGCAACCGGCTCAAAAAGATGGTCAAGCTCGGTTGAAAACGGCCAGCGGTAAGTCGGCAATGATTAAGTATACCGAGGGTTGGGTAGAGTTTCTTGATAAACGCGTGGCAAAAGCGATTGTGCCGATGCTAAACA-TGCAGCCGATCACGAACAAGAAGAAGTCAGTGTTTCGGGACATCC-TGT-GGAGCATGAAGTACTTGTCAGGGTTTAAGTGGGTCCATCTTAACGAGCGGCTAGCGTACGAACGGGCCGTGGCCAAGGAGAAGATGCGAGAACACATACAACAGATTCGCAAGGAAGCTTCGTATCACGAAACAAAAGTGCACCACAAAGAGGTGGCACTGAAAAATGCCGCAAGGGAGAAGAAAGGCAAAAATAAAAAGCAATAAATAAAAATAATTTTGTTAACGGCAATGGCTTA] [+] EMBL CNS09IH4 [TGTTTTGGGGCGACAACCAGCGGCATTTGTTTATTCGAGAAAAGTTGCAATAAATCGTTAGCTAAAA A GAAACGATTATTTCAAAGATTTTGTGGCGTTGTGAATTGGCAAACAATGAAAAG AAACGGAAGTATTATTCTCACACAAAAAAAGAAAAGGCATATTCAAACCCATTCGGACGATGAGGATGACGATCGCCTATACAACAACGAATCTAACGATGTCGGTCAAGAGCACGAGGATGAGGACGACGATCTAGCCGATGGAAGTGAGGAAGAACATGTTTCGGACGAAGAGGATGGTGACGGGCAGGACTCAAATGAGGAGGAGGAAGAAGACGATGATGTCCGGATGGACTCAAATGAGGAGGAAGATGTGGAAGCCGACGGTGCGAGTGGCGAAGGCGAAGAGGGCAGTGCGCAAAATGATGACGGAGATGAGGCCACCGAAGAAAGCAGCTCTGCCAAAATTCCAACCCCACGCAACAAGGTGAAACGAGTGAAACCTTTGGTAAAGACAAAGCAAAAGAAAACGGGCGTAATATACATCAGCTCCATTCCAAAGCATATGAATGTGACGATCCTGCGATCGTTGCTGGAACCGTTCGGCGACCTCGGACGCATTTTCCTGCAACCGGCTCAAAAAGATGGTCAAGCTCGGTTGAAAACGGCCAGCGGTAAGTCGGCAATGATTAAGTATACCGAGGGTTGGGTAGAGTTTCTTGATAAACGCGTGGCAAAAGCGATTGTGCCGATGCTAAACA TGCAGCCGATCACGAACAAGAAGAAGTCAGTGTTTCGGGACATCC TGT GGAGCATGAAGTACTTGTCAGGGTTTAAGTGGGTCCATCTTAAAGA ] [+] EMBL CNS09BLV [ AGCGGCATTTGTTTATTCGAGAAAAGTTGCAATAAATCGTTAGCTAAAA A GAAACGATTATTTCAAAGATTTTGTGGCGTTGTGAATTGGCAAACAATGAAAAG AAACGGAAGTATTATTCTCACACAAAAAAAGAAAAGGCATATTCAAACCCATTCGGACGATGAGGATGACGATCGCCTATACAACAA ] [+] EMBL CNS09JI8 [ TTTATTCGAGAAAAGTTGCAATAAATCGTTAGCTAAAACACGAAACGATTATTTCAAAGATTTTGTGGCGTTGTGAATTGGCAAACAATGAAAAGAAAACGGAAGTATTATTCTCACACAAAAAAAGAAAAGGCATATTCAAACCCATTCGGACGATGAGGATGACGATCGCCTATACAACAACGAATCTAACGATGCCGGCCAAGAGCACGAGGATGAGGACGACGATCTAGCCGATGGAAGTGAGGAAGAACATGTTTCGGACGAAGAGGATGGTGACGGGCAGGACTCAAATGAGGAGGAGGAAGAAGACGATGATGTCCGGATGGACTCAAATGAGGAGGAAGATGTGGAAGCCGACGGTGCGAGTGGCGAAGGCGAAGAGGGCAGTGCGCAAAATGATGACGGAGATGAGGCCACCGAAGAAAGCAGCTCTGCCAAAATTCCAACCCCACGCAACAAGGTGAAACGAGTGAAACCTTTGGTAAAGACAAAGCAAAAGAAAACGGGCGTAATATACATCAGCTCCATTCCAAAGCATATGAATGTGACGATCCTGCGATCGTTGCTGGAACCGTTCGGCGACCTCGGACGCATTTTCCTGCAACCGGCTCAAAAAGATGGTCAAGCTCGGTTGAAAACGGCCAGCGGTAAGTCGGCAATGATTAAGTATACCGAGGGTTGGGTAGAGTTTCTTGATAAACGCGTGGCAAAAGCGATTGTGCCGATGCTAAACA TGCAGCCGATCACGAACAAGAAGAAGTCAGTGTTTCGGGACATCC TGT GGAGCATGAAGTACTTGTCAGGGTTTAAGTGGGTCCATCTTAACGAGCGGCTAGCGTACGAACGGGCCGTGGCCAAGGAGAAGATGCGAGAACACATACAACAGATTCGCAAGGAAGCTTCGTATCACGAAACAAAAGTGCACCACAAAGAGGTGGCACTGAAAAATGCCG ] [+] EMBL BX627695 [ TTATTTCAAAGATTTTGTGGCGTTGTGAATTGGCAAACAATGAAAAG AAACGGAAGTATTATTCTCACACAAAAAAAGAAAAGGCATATTCAAACCCATTCGGACGATGAGGATGACGATCGCCTATACAACAACGAATCTAACGATGCCGGACAAGAGCAC ] [-] EMBL CNS09IH5 [ CAAACAATGAAAAG AAACGGAAGTATTATTTTAACACAAAAAAAGAAAAGGCATATTCAAACCCATTCGGACGATGAGGATGACGATCGCCTATACAACAACGAATCTAACGATGTCGGTCAAGAGCACGAGGATGAGGACGACGATCTAGCCGATGGAAGTGAGGAAGAACATGTTTCGGACGAAGAGGATGGTGACGGGCAGGACTCAAATGAGGAGGAGGAAGAAGACGATGATGTCCGGATGGACTCAAATGAGGAGGAAGATGTGGAAGCCGACGGTGCGAGTGGCGAAGGCGAAGAGGGCAGTGCGCAAAATGATGACGGAGATGAGGCCACCGAAGAAAGCAGGTCTGCCAAAATTCCAACCCCACGCAACAAGGTGAAACGAGTGAAACCTTTGGTAAAGACAAAGCAAAAGAAAACGGGCGTAATATACATCAGCTCCATTCCAAAGCATATGAATGTGACGATCCTGCGATCGTTGCTGGAACCGTTCGGCGACCTCGGACGCATTTTCCTGCAACCGGCTCAAAAAGATGGTCAAGCTCGGTTGAAAACGGCCAGCGGTAAGTCGGCAATGATTAAGTATACCGAGGGTTGGGTAGAGTTTCTTGATAAACGCGTGGCAAAAGCGATTGTGCCGATGCTAAACA TGCAGCCGATCACGAACAAGAAGAAGTCAGTGTTTCGGGACATCC TGT GGAGCATGAAGTACTTGTCAGGGTTTAAGTGGGTCCATCTTAACGAGCGGCTAGCGTACGAACGGGCCGTGGCCAAGGAGAAGATGCGAGAACACATACAACAGATTCGCAAGGAAGCTTCGTATCACGAAACAAAAGTGCACCACAAAGAGGTGGCACTGAAAAATGCCGCAAGGGAGAAGAAAGGCAAAAATAAAAAGCAATAAATAAAAATAATTTTGTTAACGGCAATGGCTTA] [-] EMBL CNS09JI9 [ GATGACGATCGCCTATACAACAACGAATCTAACGATGCCGGCCAAGAGCACGAGGATGAGGACGACGATCTAGCCGATGGAAGTGAGGAAGAACATGTTTCGGACGAAGAGGATGGTGACGGGCAGGACTCAAATGAGGAGGAGGAAGAAGACGATGATGTCCGGATGGACTCAAATGAGGAGGAAGATGTGGAAGCCGACGGTGCGAGTGGCGAAGGCGAAGAGGGCAGTGCGCAAAATGATGACGGAGATGAGGCCACCGAAGAAAGCAGCTCTGCCAAAATTCCAACCCCACGCAACAAGGTGAAACGAGTGAAACCTTTGGTAAAGACAAAGCAAAAGAAAACGGGCGTAATATACATCAGCTCCATTCCAAAGCATATGAATGTGACGATCCTGCGATCGTTGCTGGAACCGTTCGGCGACCTCGGACGCATTTTCCTGCAACCGGCTCAAAAAGATGGTCAAGCTCGGTTGAAAACGGCCAGCGGTAAGTCGGCAATGATTAAGTATACCGAGGGTTGGGTAGAGTTTCTTGATAAACGCGTGGCAAAAGCGATTGTGCCGATGCTAAACAGTGCAGCCGATCACGAACAAGAAGAAGTCAGTGTTTCGGGACATCCGTGTGGGAGCA ] [-] EMBL CNS09BLW [ ACATCC TGT GGAGCATGAAGTACTTGTCAGGGTTTAAGTGGGTCCATCTTAACGAGCGGCTAGCGTACGAACGGGCCGTGGCCAAGGAGAAGATGCGAGAACACATACAACAGATTCGCAAGGAAGCTTCGTATCACGAAACAAAAGTGCACCACAAAGAGGTGGCACTGAAAAATGCCGCAAGGGAGAAG ] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||