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Anopheles gambiae
cluster # 7371 cluster # 7371       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7371#0 length = 1049 sequences # 7  

consensusID : consensus_7371#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1049
fasta sequence
                              [TGTTTTGGGGCGACAACCAGCGGCATTTGTTTATTCGAGAAAAGTTGCAATAAATCGTTAGCTAAAA-A-GAAACGATTATTTCAAAGATTTTGTGGCGTTGTGAATTGGCAAACAATGAAAAG-AAACGGAAGTATTATTCTCACACAAAAAAAGAAAAGGCATATTCAAACCCATTCGGACGATGAGGATGACGATCGCCTATACAACAACGAATCTAACGATGCCGGTCAAGAGCACGAGGATGAGGACGACGATCTAGCCGATGGAAGTGAGGAAGAACATGTTTCGGACGAAGAGGATGGTGACGGGCAGGACTCAAATGAGGAGGAGGAAGAAGACGATGATGTCCGGATGGACTCAAATGAGGAGGAAGATGTGGAAGCCGACGGTGCGAGTGGCGAAGGCGAAGAGGGCAGTGCGCAAAATGATGACGGAGATGAGGCCACCGAAGAAAGCAGCTCTGCCAAAATTCCAACCCCACGCAACAAGGTGAAACGAGTGAAACCTTTGGTAAAGACAAAGCAAAAGAAAACGGGCGTAATATACATCAGCTCCATTCCAAAGCATATGAATGTGACGATCCTGCGATCGTTGCTGGAACCGTTCGGCGACCTCGGACGCATTTTCCTGCAACCGGCTCAAAAAGATGGTCAAGCTCGGTTGAAAACGGCCAGCGGTAAGTCGGCAATGATTAAGTATACCGAGGGTTGGGTAGAGTTTCTTGATAAACGCGTGGCAAAAGCGATTGTGCCGATGCTAAACA-TGCAGCCGATCACGAACAAGAAGAAGTCAGTGTTTCGGGACATCC-TGT-GGAGCATGAAGTACTTGTCAGGGTTTAAGTGGGTCCATCTTAACGAGCGGCTAGCGTACGAACGGGCCGTGGCCAAGGAGAAGATGCGAGAACACATACAACAGATTCGCAAGGAAGCTTCGTATCACGAAACAAAAGTGCACCACAAAGAGGTGGCACTGAAAAATGCCGCAAGGGAGAAGAAAGGCAAAAATAAAAAGCAATAAATAAAAATAATTTTGTTAACGGCAATGGCTTA]

[+] EMBL CNS09IH4             [TGTTTTGGGGCGACAACCAGCGGCATTTGTTTATTCGAGAAAAGTTGCAATAAATCGTTAGCTAAAA A GAAACGATTATTTCAAAGATTTTGTGGCGTTGTGAATTGGCAAACAATGAAAAG AAACGGAAGTATTATTCTCACACAAAAAAAGAAAAGGCATATTCAAACCCATTCGGACGATGAGGATGACGATCGCCTATACAACAACGAATCTAACGATGTCGGTCAAGAGCACGAGGATGAGGACGACGATCTAGCCGATGGAAGTGAGGAAGAACATGTTTCGGACGAAGAGGATGGTGACGGGCAGGACTCAAATGAGGAGGAGGAAGAAGACGATGATGTCCGGATGGACTCAAATGAGGAGGAAGATGTGGAAGCCGACGGTGCGAGTGGCGAAGGCGAAGAGGGCAGTGCGCAAAATGATGACGGAGATGAGGCCACCGAAGAAAGCAGCTCTGCCAAAATTCCAACCCCACGCAACAAGGTGAAACGAGTGAAACCTTTGGTAAAGACAAAGCAAAAGAAAACGGGCGTAATATACATCAGCTCCATTCCAAAGCATATGAATGTGACGATCCTGCGATCGTTGCTGGAACCGTTCGGCGACCTCGGACGCATTTTCCTGCAACCGGCTCAAAAAGATGGTCAAGCTCGGTTGAAAACGGCCAGCGGTAAGTCGGCAATGATTAAGTATACCGAGGGTTGGGTAGAGTTTCTTGATAAACGCGTGGCAAAAGCGATTGTGCCGATGCTAAACA TGCAGCCGATCACGAACAAGAAGAAGTCAGTGTTTCGGGACATCC TGT GGAGCATGAAGTACTTGTCAGGGTTTAAGTGGGTCCATCTTAAAGA                                                                                                                                                                                                ]
[+] EMBL CNS09BLV             [                  AGCGGCATTTGTTTATTCGAGAAAAGTTGCAATAAATCGTTAGCTAAAA A GAAACGATTATTTCAAAGATTTTGTGGCGTTGTGAATTGGCAAACAATGAAAAG AAACGGAAGTATTATTCTCACACAAAAAAAGAAAAGGCATATTCAAACCCATTCGGACGATGAGGATGACGATCGCCTATACAACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS09JI8             [                             TTTATTCGAGAAAAGTTGCAATAAATCGTTAGCTAAAACACGAAACGATTATTTCAAAGATTTTGTGGCGTTGTGAATTGGCAAACAATGAAAAGAAAACGGAAGTATTATTCTCACACAAAAAAAGAAAAGGCATATTCAAACCCATTCGGACGATGAGGATGACGATCGCCTATACAACAACGAATCTAACGATGCCGGCCAAGAGCACGAGGATGAGGACGACGATCTAGCCGATGGAAGTGAGGAAGAACATGTTTCGGACGAAGAGGATGGTGACGGGCAGGACTCAAATGAGGAGGAGGAAGAAGACGATGATGTCCGGATGGACTCAAATGAGGAGGAAGATGTGGAAGCCGACGGTGCGAGTGGCGAAGGCGAAGAGGGCAGTGCGCAAAATGATGACGGAGATGAGGCCACCGAAGAAAGCAGCTCTGCCAAAATTCCAACCCCACGCAACAAGGTGAAACGAGTGAAACCTTTGGTAAAGACAAAGCAAAAGAAAACGGGCGTAATATACATCAGCTCCATTCCAAAGCATATGAATGTGACGATCCTGCGATCGTTGCTGGAACCGTTCGGCGACCTCGGACGCATTTTCCTGCAACCGGCTCAAAAAGATGGTCAAGCTCGGTTGAAAACGGCCAGCGGTAAGTCGGCAATGATTAAGTATACCGAGGGTTGGGTAGAGTTTCTTGATAAACGCGTGGCAAAAGCGATTGTGCCGATGCTAAACA TGCAGCCGATCACGAACAAGAAGAAGTCAGTGTTTCGGGACATCC TGT GGAGCATGAAGTACTTGTCAGGGTTTAAGTGGGTCCATCTTAACGAGCGGCTAGCGTACGAACGGGCCGTGGCCAAGGAGAAGATGCGAGAACACATACAACAGATTCGCAAGGAAGCTTCGTATCACGAAACAAAAGTGCACCACAAAGAGGTGGCACTGAAAAATGCCG                                                                   ]
[+] EMBL BX627695             [                                                                             TTATTTCAAAGATTTTGTGGCGTTGTGAATTGGCAAACAATGAAAAG AAACGGAAGTATTATTCTCACACAAAAAAAGAAAAGGCATATTCAAACCCATTCGGACGATGAGGATGACGATCGCCTATACAACAACGAATCTAACGATGCCGGACAAGAGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS09IH5             [                                                                                                              CAAACAATGAAAAG AAACGGAAGTATTATTTTAACACAAAAAAAGAAAAGGCATATTCAAACCCATTCGGACGATGAGGATGACGATCGCCTATACAACAACGAATCTAACGATGTCGGTCAAGAGCACGAGGATGAGGACGACGATCTAGCCGATGGAAGTGAGGAAGAACATGTTTCGGACGAAGAGGATGGTGACGGGCAGGACTCAAATGAGGAGGAGGAAGAAGACGATGATGTCCGGATGGACTCAAATGAGGAGGAAGATGTGGAAGCCGACGGTGCGAGTGGCGAAGGCGAAGAGGGCAGTGCGCAAAATGATGACGGAGATGAGGCCACCGAAGAAAGCAGGTCTGCCAAAATTCCAACCCCACGCAACAAGGTGAAACGAGTGAAACCTTTGGTAAAGACAAAGCAAAAGAAAACGGGCGTAATATACATCAGCTCCATTCCAAAGCATATGAATGTGACGATCCTGCGATCGTTGCTGGAACCGTTCGGCGACCTCGGACGCATTTTCCTGCAACCGGCTCAAAAAGATGGTCAAGCTCGGTTGAAAACGGCCAGCGGTAAGTCGGCAATGATTAAGTATACCGAGGGTTGGGTAGAGTTTCTTGATAAACGCGTGGCAAAAGCGATTGTGCCGATGCTAAACA TGCAGCCGATCACGAACAAGAAGAAGTCAGTGTTTCGGGACATCC TGT GGAGCATGAAGTACTTGTCAGGGTTTAAGTGGGTCCATCTTAACGAGCGGCTAGCGTACGAACGGGCCGTGGCCAAGGAGAAGATGCGAGAACACATACAACAGATTCGCAAGGAAGCTTCGTATCACGAAACAAAAGTGCACCACAAAGAGGTGGCACTGAAAAATGCCGCAAGGGAGAAGAAAGGCAAAAATAAAAAGCAATAAATAAAAATAATTTTGTTAACGGCAATGGCTTA]
[-] EMBL CNS09JI9             [                                                                                                                                                                                             GATGACGATCGCCTATACAACAACGAATCTAACGATGCCGGCCAAGAGCACGAGGATGAGGACGACGATCTAGCCGATGGAAGTGAGGAAGAACATGTTTCGGACGAAGAGGATGGTGACGGGCAGGACTCAAATGAGGAGGAGGAAGAAGACGATGATGTCCGGATGGACTCAAATGAGGAGGAAGATGTGGAAGCCGACGGTGCGAGTGGCGAAGGCGAAGAGGGCAGTGCGCAAAATGATGACGGAGATGAGGCCACCGAAGAAAGCAGCTCTGCCAAAATTCCAACCCCACGCAACAAGGTGAAACGAGTGAAACCTTTGGTAAAGACAAAGCAAAAGAAAACGGGCGTAATATACATCAGCTCCATTCCAAAGCATATGAATGTGACGATCCTGCGATCGTTGCTGGAACCGTTCGGCGACCTCGGACGCATTTTCCTGCAACCGGCTCAAAAAGATGGTCAAGCTCGGTTGAAAACGGCCAGCGGTAAGTCGGCAATGATTAAGTATACCGAGGGTTGGGTAGAGTTTCTTGATAAACGCGTGGCAAAAGCGATTGTGCCGATGCTAAACAGTGCAGCCGATCACGAACAAGAAGAAGTCAGTGTTTCGGGACATCCGTGTGGGAGCA                                                                                                                                                                                                                                        ]
[-] EMBL CNS09BLW             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACATCC TGT GGAGCATGAAGTACTTGTCAGGGTTTAAGTGGGTCCATCTTAACGAGCGGCTAGCGTACGAACGGGCCGTGGCCAAGGAGAAGATGCGAGAACACATACAACAGATTCGCAAGGAAGCTTCGTATCACGAAACAAAAGTGCACCACAAAGAGGTGGCACTGAAAAATGCCGCAAGGGAGAAG                                                        ]


>consensus_7371#0 TGTTTTGGGGCGACAACCAGCGGCATTTGTTTATTCGAGAAAAGTTGCAATAAATCGTTA GCTAAAAAGAAACGATTATTTCAAAGATTTTGTGGCGTTGTGAATTGGCAAACAATGAAA AGAAACGGAAGTATTATTCTCACACAAAAAAAGAAAAGGCATATTCAAACCCATTCGGAC GATGAGGATGACGATCGCCTATACAACAACGAATCTAACGATGCCGGTCAAGAGCACGAG GATGAGGACGACGATCTAGCCGATGGAAGTGAGGAAGAACATGTTTCGGACGAAGAGGAT GGTGACGGGCAGGACTCAAATGAGGAGGAGGAAGAAGACGATGATGTCCGGATGGACTCA AATGAGGAGGAAGATGTGGAAGCCGACGGTGCGAGTGGCGAAGGCGAAGAGGGCAGTGCG CAAAATGATGACGGAGATGAGGCCACCGAAGAAAGCAGCTCTGCCAAAATTCCAACCCCA CGCAACAAGGTGAAACGAGTGAAACCTTTGGTAAAGACAAAGCAAAAGAAAACGGGCGTA ATATACATCAGCTCCATTCCAAAGCATATGAATGTGACGATCCTGCGATCGTTGCTGGAA CCGTTCGGCGACCTCGGACGCATTTTCCTGCAACCGGCTCAAAAAGATGGTCAAGCTCGG TTGAAAACGGCCAGCGGTAAGTCGGCAATGATTAAGTATACCGAGGGTTGGGTAGAGTTT CTTGATAAACGCGTGGCAAAAGCGATTGTGCCGATGCTAAACATGCAGCCGATCACGAAC AAGAAGAAGTCAGTGTTTCGGGACATCCTGTGGAGCATGAAGTACTTGTCAGGGTTTAAG TGGGTCCATCTTAACGAGCGGCTAGCGTACGAACGGGCCGTGGCCAAGGAGAAGATGCGA GAACACATACAACAGATTCGCAAGGAAGCTTCGTATCACGAAACAAAAGTGCACCACAAA GAGGTGGCACTGAAAAATGCCGCAAGGGAGAAGAAAGGCAAAAATAAAAAGCAATAAATA AAAATAATTTTGTTAACGGCAATGGCTTA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)