Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7399 cluster # 7399       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7399#0 length = 1783 sequences # 5  
consensus_7399#1 length = 625 sequences # 1  
consensus_7399#2 length = 599 sequences # 1  

consensusID : consensus_7399#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1783
fasta sequence
                              [GGACCATCCGGGCATTGCCGAAATGGCTCCGCCGTCCTTCGCCTCCCTGACGGGACATGGGATCTCCTCCGCTTCATCTCCCTCCTCCTCCACCTCCGTGTCGTTGCCTGCAGTAGCTGGCCAGCAACCACAACCCATCCAGCAGCCACAGCAGCAGCAGCAGTCAGCGCAACAGCAAAACCAGCAGCAACCCAATCCGCCACCGTTGCAGAGCGCCCCGTACCAGAAATCATCCATCGAATGCTAAAAAGCGCCTGCTCAGGAGTGCCAACCGCGCGCAGCCCTACTAACACACAAGCACAGAAATCGCCTCTATCACACACACACACATACACTGGCCGCGTGCCACCCCTCATGCAAGAGGAAATGAGCTACCCCACACGCGCAATAAGACAACAGCGCGGCCCCTTTGCATGAGCGTTTTTGCCAAACTGCTGGTGCGCCTGAAACGTTTACCCATGGGTGTGTCACGGTAGGGCGTGTGTGTGTGTGTGTGTTTGTATATTGCATGCAGTTTTTATAAGAGAATGTGTGTGTGTGTGCGTGCGCGATTTTGTTGTTTGCGAGTGCAGTTCACCTAACTCAAGTGCGATACACATCCGGTGTTGCTGATAACTGATTTCCTTACTTCCCCTCAAGTGGATTGTGCCAGCAGGTTCACACCAAAAACAGCATTGATTGTTGTTGTGATAAACTACAAGCAAAACAAAAAAAACCCGATACCTGAAAGGGCGATAGTGTGGCGATAGAGTTAGTCGACATTTAATTAGCGTAAATTAAACATTAATCAGGGCTGTCCAGGCTATCACTAAATTGTGTACGTAACGATGGCCGCATTTCAGGGAGCAAACGAGTAATGCATGAGTGATGTTAGGCTTGTTAGTGTTAGAGGACACAGTTTTAGAACGATCTTACCATTACCGCAATCATTGCCGGTAACGCTAATATTGCTAATATATTTAAACGCCAGCATCACTATTCCAATCGGAACCACTACTCCTCTCGAGCGCGGCGTGAGTTGCGAGTTCGACTTTGCGGACAGCGCGTGGTGTGCGGCGCCGGCTTAAGCCCAAAGCACCGGCGCACCACGGTGGGGAGCAGGGAGCAAGATCGTTTGTACATCATCATCAACGAGCAACGAACAGGGGAAGCATCACACGCACGGTACCGCCTTCTTTCACGTTTTGTTCGCCCCCAAAGGTGCGTTATCATGGCGCGTTTACGATTAAAAATAGATTATCACACAGCCACAGTGTCGCGCAGCGCGTACGCGTACCGGTTTAGCTGAACGTGCAATGCCGCGCAGAAAGAGAGAGAGAGAGATCGCCGACAGGCGATGATGGGCTGTGACGTGATTTGTACCCGGTGGTACACGGGTATGTTTGCCGTTTTAGACGCCATCAAACGGGCGTATCGAATGCATTTTGTCCCCCCCAACTTGCATCCACTTGTCAGGCCGGTGTCTGGCGGTGTCTGGCGCTTTGATGCTTGCAGCACACATCGAATGCGTAAAAGGGCACCGGCTACGGCTTGTGTTAGAAGTTTCGATCTCGTTTTCCTCCCCCGTCCCGGTCACACGCCATTGTGTCATGGTGGCGTTGTTAGTGTCCTTTTTGTTGTTGTTGTTTGTTCTGCCAAAGCGAAATTCGCGATGCCGTAGCAACCCGCGGGCAAGGCGACCCATTGGTGTCGGTGATAGATGCATGAAATGGGGGGAAAACACAGTAGGAACACCTACAAAGAACAGATTTTTGTAGGTAGATTTCTTACACGTTTCCCCACC]

[+] EMBL BX607533             [GGACCATCCGGGCATTGCCGAAATGGCTCCGCCGTCCTTCGCCTCCCTGACGGGACATGGGATCTCCTCCGCTTCATCTCCCTCCTCCTCCACCTCCGTGTCGTTGCCTGCAGTAGCTGGCCAGCAACCACAACCCATCCAGCAGCCACAGCAGCAGCAGCAGTCAGCGCAACAGCAAAACCAGCAGCAACCCAATCCGCCACCGTTGCAGAGCGCCCCGTACCAGAAATCATCCATCGAATGCTAAAAAGCGCCTGCTCAGGAGTGCCAACCGCGCGCAGCCCTACTAACACACAAGCACAGAAATCGCCTCTATCACACACACACACATACACTGGCCGCGTGCCACCCCTCATGCAAGAGGAAATGAGCTACCCCACACGCGCAATAAGACAACAGCGCGGCCCCTTTGCATGAGCGTTTTTGCCAAACTGCTGGTGCGCCTGAAACGTTTACCCATGGGTGTGTCACGGTAGGGCGTGTGTGTGTGTGTGTGTTTGTATATTGCATGCAGTTTTTATAAGAGAATGTGTGTGTGTGTGCGTGCGCGATTTTGTTGTTTGCGAGTGCAGTTCACCTAACTCAAGTGCGATACACATCCGGTGTTGCTGATAACTGATTTCCTTACTTCCCCTCAAGTGGATTGTGCCAGCAGGTTCACACCAAAAACAGCATTGATTGTTGTTGTGATAAACTACAAGCAAAACAAAAAAAACCCGATACCTGAAAGGGCGATAGTGTGGCGATAGAGTTAGTCGACATTTAATTAGCGTAAATTAAACATTAATCAGGGCTGTCCAGGCTATCACTAAATTGTGTACGTAACGATGGCCGCATTTCAGGGAGCAAACGAGTAATGCATGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX602869             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGAATGTGTGTGTGTGTGCGTGCGCGATTTTGTTGTTTGCGAGTGCAGTTCACCTAACTCAAGTGCGATACACATCCGGTGTTGCTGATAACTGATTTCCTTACTTCCCCTCAAGTGGATTGTGCCAGCAGGTTCACACCAAAAACAGCATTGATTGTTGTTGTGATAAACTACAAGCAAAACAAAAAAAACCCGATACCTGAAAGGGCGATAGTGTGGCGATAGAGTTAGTCGACATTTAATTAGCGTAAATTAAACATTAATCAGGGCTGTCCAGGCTATCACTAAATTGTGTACGTAACGATGGCCGCATTTCAGGGAGCAAACGAGTAATGCATGAGTGATGTTAGGCTTGTTAGTGTTAGAGGACACAGTTTTAGAACGATCTTACCATTACCGCAATCATTGCCGGTAACGCTAATATTGCTAATATATTTAAACGCCAGCATCACTATTCCAATCGGAACCACTACTCCTCTCGAGCGCGGCGTGAGTTGCGAGTTCGACTTTGCGGACAGCGCGTGGTGTGCGGCGCCGGCTTAAGCCCAAAGCACCGGCGCACCACGGTGGGGAGCAGGGAGCAAGATCGTTTGTACATCATCATCAACGAGCAACGAACAGGGGAAGCATCACACGCACGGTACCGCCTTCTTTCACGTTTTGTTCGCCCCCAAAGGTGCGTTATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX615738             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CATTGCCGGTAACGCTAATATTGCTATTATATTTAAACGCCAGCATCACTATTCCAATCGGAACCACTACTCCTCTCGAGCGCGGCGTGAGTTGCGAGTTCGACTTTGCGGACAGCGCGTGGTGTGCGGCGCCGGCTTAAGCCCAAAGCACCGGCGCACCACGGTGGGGAGCAGGGAGCAAGATCGTTTGTACATCATCATCAACGAGCAACGAACAGGGGAAGCATCACACGCACGGTACCGCCTTCTTTCACGTTTTGTTCG CCCCAAAGGTGCGTTATCATGGCGCGTTTACGATTAAAAATAGATTATCACACAGCCACAGTGTCGCGCAGCGCGTACGCGTACCGGTTTAGCTGAACGTGCAATGCCGCGCAGAAAGAGAGAGAGAGAGATCGCCGACAGGCGATGATGGGCTGTGACGTGATTTGTACCCGGTGGTACACGGGTATGTTTGCCGTTTTAGACGCCATCAAACGGGCGTATCGAATTCATTTTGTCCCCCCCAACTTGCATCCACTTGTCAGGCCGGTGTCTGGCGGTGTCTGGCGCTTTGATGCTTGCAGCACACATC                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM646080             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccgCGGCGCACCACGGTGGGGAGCAGGGAGCAAGATCGTTTGTACATCATCATCAACGAGCAACGAACAGGGGAAGCATCACACGCACGGTACCGCCTTCTTTCACGTTTTGTTCGCCCCCAAAGGTGCGTTATCATGGCGCGTTTACGATTAAAAATAGATTATCACACAGCCACAGTGTCGCGCAGCGCGTACGCGTACCGGTTTAGCTGAACGTGCAATGCCGCGCAGAAAGAGAGAGAGAGAGATCGCCGACAGGCGATGATGGGCTGTGACGTGATTTGTACCCGGTGGTACACGGGTATGTTTGCCGTTTTAGACGCCATCAAACGGGCGTATCGAATGCATTTTGTCCCCCCCAACTTGCATCCACTTGTCAGGCCGGTGTCTGGCGGTGTCTGGCGCTTTGATGCTTGCAGCACACATCGAATGCGTAAAAGGGCACCGGCTACGGCTTGTGTTAGAAGTTTCGATCTCGTTTTCCTCCCCCGTCCCGGTCACACGCCATTGTGTCATGGTGGCGTTGTTAGTGTCCTTTTTGTTGTTGTTGTTTGTTCTGCCAAAGCGAAATTCGCGATGCCGTAGCAACCCGCGGGCAAGGCGACCCATTGGTGTCGGTGATAGATGCATGAAATGGGGGG                                                                   ]
[+] EMBL BX617014             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTTTGTACATCATCATCAACGAGCAACGAACAGGGGAAGCATCACACGCACGGTACCGCCTTCTTTCACGTTTTGTTCGCCCCCAAAGGTGCGTTATCATGGCGCGTTTACGATTAAAAATAGATTATCACACAGCCACAGTGTCGCGCAGCGCGTACGCGTACCGGTTTAGCTGAACGTGCAATGCCGCGCAGAAAGAGAGAGAGAGAGATCGCCGACAGGCGATGATGGGCTGTGACGTGATTTGTACCCGGTGGTACACGGGTATGTTTGCCGTTTTAGACGCCATCAAACGGGCGTATCGAATGCATTTTGTCCCCCCCAACTTGCATCCACTTGTCAGGCCGGTGTCTGGCGGTGTCTGGCGCTTTGATGCTTGCAGCACACATCGAATGCGTAAAAGGGCACCGGCTACGGCTTGTGTTAGAAGTTTCGATCTCGTTTTCCTCCCCCGTCCCGGTCACACGCCATTGTGTCATGGTGGCGTTGTTAGTGTCCTTTTTGTTGTAGTTGTTTGTTCTGCCAAAGCGAAATTCGCGATGCCGTAGCAACCCGCGGGCAAGGCGACCCATTGGTGTCGGTGATAGATGCATGAAATGGGGGGAAAACACAGTAGGAACACCTACAAAGAACAGATTTTTGTAGGTAGATTTCTTACACGTTTCCCCACC]


>consensus_7399#0 GGACCATCCGGGCATTGCCGAAATGGCTCCGCCGTCCTTCGCCTCCCTGACGGGACATGG GATCTCCTCCGCTTCATCTCCCTCCTCCTCCACCTCCGTGTCGTTGCCTGCAGTAGCTGG CCAGCAACCACAACCCATCCAGCAGCCACAGCAGCAGCAGCAGTCAGCGCAACAGCAAAA CCAGCAGCAACCCAATCCGCCACCGTTGCAGAGCGCCCCGTACCAGAAATCATCCATCGA ATGCTAAAAAGCGCCTGCTCAGGAGTGCCAACCGCGCGCAGCCCTACTAACACACAAGCA CAGAAATCGCCTCTATCACACACACACACATACACTGGCCGCGTGCCACCCCTCATGCAA GAGGAAATGAGCTACCCCACACGCGCAATAAGACAACAGCGCGGCCCCTTTGCATGAGCG TTTTTGCCAAACTGCTGGTGCGCCTGAAACGTTTACCCATGGGTGTGTCACGGTAGGGCG TGTGTGTGTGTGTGTGTTTGTATATTGCATGCAGTTTTTATAAGAGAATGTGTGTGTGTG TGCGTGCGCGATTTTGTTGTTTGCGAGTGCAGTTCACCTAACTCAAGTGCGATACACATC CGGTGTTGCTGATAACTGATTTCCTTACTTCCCCTCAAGTGGATTGTGCCAGCAGGTTCA CACCAAAAACAGCATTGATTGTTGTTGTGATAAACTACAAGCAAAACAAAAAAAACCCGA TACCTGAAAGGGCGATAGTGTGGCGATAGAGTTAGTCGACATTTAATTAGCGTAAATTAA ACATTAATCAGGGCTGTCCAGGCTATCACTAAATTGTGTACGTAACGATGGCCGCATTTC AGGGAGCAAACGAGTAATGCATGAGTGATGTTAGGCTTGTTAGTGTTAGAGGACACAGTT TTAGAACGATCTTACCATTACCGCAATCATTGCCGGTAACGCTAATATTGCTAATATATT TAAACGCCAGCATCACTATTCCAATCGGAACCACTACTCCTCTCGAGCGCGGCGTGAGTT GCGAGTTCGACTTTGCGGACAGCGCGTGGTGTGCGGCGCCGGCTTAAGCCCAAAGCACCG GCGCACCACGGTGGGGAGCAGGGAGCAAGATCGTTTGTACATCATCATCAACGAGCAACG AACAGGGGAAGCATCACACGCACGGTACCGCCTTCTTTCACGTTTTGTTCGCCCCCAAAG GTGCGTTATCATGGCGCGTTTACGATTAAAAATAGATTATCACACAGCCACAGTGTCGCG CAGCGCGTACGCGTACCGGTTTAGCTGAACGTGCAATGCCGCGCAGAAAGAGAGAGAGAG AGATCGCCGACAGGCGATGATGGGCTGTGACGTGATTTGTACCCGGTGGTACACGGGTAT GTTTGCCGTTTTAGACGCCATCAAACGGGCGTATCGAATGCATTTTGTCCCCCCCAACTT GCATCCACTTGTCAGGCCGGTGTCTGGCGGTGTCTGGCGCTTTGATGCTTGCAGCACACA TCGAATGCGTAAAAGGGCACCGGCTACGGCTTGTGTTAGAAGTTTCGATCTCGTTTTCCT CCCCCGTCCCGGTCACACGCCATTGTGTCATGGTGGCGTTGTTAGTGTCCTTTTTGTTGT TGTTGTTTGTTCTGCCAAAGCGAAATTCGCGATGCCGTAGCAACCCGCGGGCAAGGCGAC CCATTGGTGTCGGTGATAGATGCATGAAATGGGGGGAAAACACAGTAGGAACACCTACAA AGAACAGATTTTTGTAGGTAGATTTCTTACACGTTTCCCCACC



consensusID : consensus_7399#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 625
fasta sequence
                              [CCGCAAGAGGAAATGCGCTACCCCACACGCGCAATAAAACAACAGCGCGGCGCCTTTGCATGAGAGTTTCTGCCAAACTGCTGGTGCGCCTGAAACGTTTACCCTTGGGTGTGTCACGTCGTAGCATCGGGTCAGGACATACTGATCTATCTGTCGCCGGGACAGAATAAGATTATTCATTCGTGGATCGTATCGTAGTTACCGTCAGCAAGGCTTCCGGTTCCACCGCCGTGCGTCGTGCGTCGACCGGAAATGGAGAGAAATAGACAGATAACAAAAAAAAACCCAAACCGAAACACACACACACAAACGCTTATAAAATACCAGAAACCAGCCAGCCGCCACAGGAGGAGGGATTCAATCGTCGCCTCGTTTGCCATCACGCCCGTGTGTGTCTGTGTGTGTCTGTGTGTGTGTGTGCCTTAAAGCCAGACTGAAAATCTCGAACCTCAACAGGGGGAAGAGTATTGCATGCGCGCCTGCAATGTTTGTACAGAAACAGCACACACAGGGCGTGGTGCAAAGAAGAAAAAGAAAAGGGAGGTAAAAAAAGAAATACCAATGTGCGAAACACACTGTGAACACTGTATCGTGTTTAGTAAAGGCTACAAACTTATTAAGAGAG]

[+] EMBL BM638739             [CCGCAAGAGGAAATGCGCTACCCCACACGCGCAATAAAACAACAGCGCGGCGCCTTTGCATGAGAGTTTCTGCCAAACTGCTGGTGCGCCTGAAACGTTTACCCTTGGGTGTGTCACGTCGTAGCATCGGGTCAGGACATACTGATCTATCTGTCGCCGGGACAGAATAAGATTATTCATTCGTGGATCGTATCGTAGTTACCGTCAGCAAGGCTTCCGGTTCCACCGCCGTGCGTCGTGCGTCGACCGGAAATGGAGAGAAATAGACAGATAACAAAAAAAAACCCAAACCGAAACACACACACACAAACGCTTATAAAATACCAGAAACCAGCCAGCCGCCACAGGAGGAGGGATTCAATCGTCGCCTCGTTTGCCATCACGCCCGTGTGTGTCTGTGTGTGTCTGTGTGTGTGTGTGCCTTAAAGCCAGACTGAAAATCTCGAACCTCAACAGGGGGAAGAGTATTGCATGCGCGCCTGCAATGTTTGTACAGAAACAGCACACACAGGGCGTGGTGCAAAGAAGAAAAAGAAAAGGGAGGTAAAAAAAGAAATACCAATGTGCGAAACACACTGTGAACACTGTATCGTGTTTAGTAAAGGCTACAAACTTATTAAGAGAG]


>consensus_7399#1 CCGCAAGAGGAAATGCGCTACCCCACACGCGCAATAAAACAACAGCGCGGCGCCTTTGCA TGAGAGTTTCTGCCAAACTGCTGGTGCGCCTGAAACGTTTACCCTTGGGTGTGTCACGTC GTAGCATCGGGTCAGGACATACTGATCTATCTGTCGCCGGGACAGAATAAGATTATTCAT TCGTGGATCGTATCGTAGTTACCGTCAGCAAGGCTTCCGGTTCCACCGCCGTGCGTCGTG CGTCGACCGGAAATGGAGAGAAATAGACAGATAACAAAAAAAAACCCAAACCGAAACACA CACACACAAACGCTTATAAAATACCAGAAACCAGCCAGCCGCCACAGGAGGAGGGATTCA ATCGTCGCCTCGTTTGCCATCACGCCCGTGTGTGTCTGTGTGTGTCTGTGTGTGTGTGTG CCTTAAAGCCAGACTGAAAATCTCGAACCTCAACAGGGGGAAGAGTATTGCATGCGCGCC TGCAATGTTTGTACAGAAACAGCACACACAGGGCGTGGTGCAAAGAAGAAAAAGAAAAGG GAGGTAAAAAAAGAAATACCAATGTGCGAAACACACTGTGAACACTGTATCGTGTTTAGT AAAGGCTACAAACTTATTAAGAGAG



consensusID : consensus_7399#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 599
fasta sequence
                              [CCGATTAAAAATAGATTATCACACAGCCACAGTGTCGCGCAGCGCGTACGCGTACCGGTTTAGCTGAACGTGCAATGCCGTGCAGAAAGAGAGAGAGAGAGAAAGATCGCCGACAGGCGATGATGGGCTGTGACGTGATTTGTACCCGGTGGTACACGGGTATGTTTGCCGTTTTAGACGCCATCAAACGGGCGCATCGAATGCATTTTGCCCCCCCCCCCAACTTGCATCCACTTGTCAGGCCGGTGTCTGGCGGTGTCTGGCGCTTTGATGCTTGCAGCACACATCGAATGCGTAAAAGGGCACCGGCTCCGGCTTATGTTAGAAGTTTCGATCTCGTTTTCCTTCCCCGTCCCGGTCACACGCCATTGTGTCATGGTGGCGTTGTTAGTGTCCTTTTTGTTGTTGTTGTTTGTTCTGTTGTTTGTTCCCCCCCCCCTCTCTCTCTGGCCGTTCAGTGTAATAGTAAATGCTAATTTGGATAGCCAACCTTTCCTAAACACACACACACACATTATGCTTTCTGGTCAATCAATCCATTCCCGGGCGCAGCAATTTCTGTTGTGTCGGACTTATCGTATTTTTTAAATATGTATGAT]

[+] EMBL BM645195             [CCGATTAAAAATAGATTATCACACAGCCACAGTGTCGCGCAGCGCGTACGCGTACCGGTTTAGCTGAACGTGCAATGCCGTGCAGAAAGAGAGAGAGAGAGAAAGATCGCCGACAGGCGATGATGGGCTGTGACGTGATTTGTACCCGGTGGTACACGGGTATGTTTGCCGTTTTAGACGCCATCAAACGGGCGCATCGAATGCATTTTGCCCCCCCCCCCAACTTGCATCCACTTGTCAGGCCGGTGTCTGGCGGTGTCTGGCGCTTTGATGCTTGCAGCACACATCGAATGCGTAAAAGGGCACCGGCTCCGGCTTATGTTAGAAGTTTCGATCTCGTTTTCCTTCCCCGTCCCGGTCACACGCCATTGTGTCATGGTGGCGTTGTTAGTGTCCTTTTTGTTGTTGTTGTTTGTTCTGTTGTTTGTTCCCCCCCCCCTCTCTCTCTGGCCGTTCAGTGTAATAGTAAATGCTAATTTGGATAGCCAACCTTTCCTAAACACACACACACACATTATGCTTTCTGGTCAATCAATCCATTCCCGGGCGCAGCAATTTCTGTTGTGTCGGACTTATCGTATTTTTTAAATATGTATGAT]


>consensus_7399#2 CCGATTAAAAATAGATTATCACACAGCCACAGTGTCGCGCAGCGCGTACGCGTACCGGTT TAGCTGAACGTGCAATGCCGTGCAGAAAGAGAGAGAGAGAGAAAGATCGCCGACAGGCGA TGATGGGCTGTGACGTGATTTGTACCCGGTGGTACACGGGTATGTTTGCCGTTTTAGACG CCATCAAACGGGCGCATCGAATGCATTTTGCCCCCCCCCCCAACTTGCATCCACTTGTCA GGCCGGTGTCTGGCGGTGTCTGGCGCTTTGATGCTTGCAGCACACATCGAATGCGTAAAA GGGCACCGGCTCCGGCTTATGTTAGAAGTTTCGATCTCGTTTTCCTTCCCCGTCCCGGTC ACACGCCATTGTGTCATGGTGGCGTTGTTAGTGTCCTTTTTGTTGTTGTTGTTTGTTCTG TTGTTTGTTCCCCCCCCCCTCTCTCTCTGGCCGTTCAGTGTAATAGTAAATGCTAATTTG GATAGCCAACCTTTCCTAAACACACACACACACATTATGCTTTCTGGTCAATCAATCCAT TCCCGGGCGCAGCAATTTCTGTTGTGTCGGACTTATCGTATTTTTTAAATATGTATGAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7399#0      GGACCATCCGGGCATTGCCGAAATGGCTCCGCCGTCCTTCGCCTCCCTGACGGGACATGG 60
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      GATCTCCTCCGCTTCATCTCCCTCCTCCTCCACCTCCGTGTCGTTGCCTGCAGTAGCTGG 120
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      CCAGCAACCACAACCCATCCAGCAGCCACAGCAGCAGCAGCAGTCAGCGCAACAGCAAAA 180
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      CCAGCAGCAACCCAATCCGCCACCGTTGCAGAGCGCCCCGTACCAGAAATCATCCATCGA 240
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      ATGCTAAAAAGCGCCTGCTCAGGAGTGCCAACCGCGCGCAGCCCTACTAACACACAAGCA 300
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      CAGAAATCGCCTCTATCACACACACACACATACACTGGCCGCGTGCCACCCCTCATGCAA 360
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      GAGGAAATGAGCTACCCCACACGCGCAATAAGACAACAGCGCGGCCCCTTTGCATGAGCG 420
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      TTTTTGCCAAACTGCTGGTGCGCCTGAAACGTTTACCCATGGGTGTGTCACGGTAGGGCG 480
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      TGTGTGTGTGTGTGTGTTTGTATATTGCATGCAGTTTTTATAAGAGAATGTGTGTGTGTG 540
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      TGCGTGCGCGATTTTGTTGTTTGCGAGTGCAGTTCACCTAACTCAAGTGCGATACACATC 600
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      CGGTGTTGCTGATAACTGATTTCCTTACTTCCCCTCAAGTGGATTGTGCCAGCAGGTTCA 660
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      CACCAAAAACAGCATTGATTGTTGTTGTGATAAACTACAAGCAAAACAAAAAAAACCCGA 720
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      TACCTGAAAGGGCGATAGTGTGGCGATAGAGTTAGTCGACATTTAATTAGCGTAAATTAA 780
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      ACATTAATCAGGGCTGTCCAGGCTATCACTAAATTGTGTACGTAACGATGGCCGCATTTC 840
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      AGGGAGCAAACGAGTAATGCATGAGTGATGTTAGGCTTGTTAGTGTTAGAGGACACAGTT 900
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      TTAGAACGATCTTACCATTACCGCAATCATTGCCGGTAACGCTAATATTGCTAATATATT 960
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      TAAACGCCAGCATCACTATTCCAATCGGAACCACTACTCCTCTCGAGCGCGGCGTGAGTT 1020
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      GCGAGTTCGACTTTGCGGACAGCGCGTGGTGTGCGGCGCCGGCTTAAGCCCAAAGCACCG 1080
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      GCGCACCACGGTGGGGAGCAGGGAGCAAGATCGTTTGTACATCATCATCAACGAGCAACG 1140
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      ------------------------------------------------------------
                                                                                  

consensus_7399#0      AACAGGGGAAGCATCACACGCACGGTACCGCCTTCTTTCACGTTTTGTTCGCCCCCAAAG 1200
consensus_7399#2      ------------------------------------------------------------
consensus_7399#1      -------------CCGCAAGAGGAAATGCGCTACCCCACACGCGCAATAAAACAACAGCG 47
                                                                                  

consensus_7399#0      GTGCGTTATCATG-GCGCGTTTACGATTAAAAATAGAT---TATCACACAGCCACAGTGT 1256
consensus_7399#2      ----------------------CCGATTAAAAATAGAT---TATCACACAGCCACAGTGT 35
consensus_7399#1      CGGCGCCTTTGCATGAGAGTTTCTGCCAAACTGCTGGTGCGCCTGAAACGTTTACCCTTG 107
                                              *   **     * *     * * **    **  *  

consensus_7399#0      CGCGCAGCGCGTACGCGTACCGGTTTAG--CTGAACGTGCAATGCCGCGCAGAAAGAGAG 1314
consensus_7399#2      CGCGCAGCGCGTACGCGTACCGGTTTAG--CTGAACGTGCAATGCCGTGCAGAAAGAGAG 93
consensus_7399#1      GGTGTGTCACGTCGTAGCATCGGGTCAGGACATACTGATCTATCTGTCGCCGGGACAGAA 167
                       * *   * ***    * * *** * **  *  *  *  * **     ** *  * *** 

consensus_7399#0      AGAGAGAGA----TCGCCGACAG----GCGATGATGGGCTGTGACGTGATTTGTACC-CG 1365
consensus_7399#2      AGAGAGAGAAAGATCGCCGACAG----GCGATGATGGGCTGTGACGTGATTTGTACC-CG 148
consensus_7399#1      TAAGATTATTCATTCGTGGATCGTATCGTAGTTACCGTCAGCAAGGCTTCCGGTTCCACC 227
                        ***        ***  **  *    *   * *  * * *  * *      ** ** * 

consensus_7399#0      GTGGTACACGGGTATGTTTGCCGTTT-TAGACGCCATCAAACGGGCGTATCGAATGCATT 1424
consensus_7399#2      GTGGTACACGGGTATGTTTGCCGTTT-TAGACGCCATCAAACGGGCGCATCGAATGCATT 207
consensus_7399#1      GCCGTGCGTCG-TGCGTCGACCGGAAATGGAGAGAAATAGACAGATAACAAAAAAAAACC 286
                      *  ** *   * *  **   ***    * **    *  * ** *        **   *  

consensus_7399#0      TTGTCCCCCCC---AACTTGCATCCACTTGTCAGGCCGGTGTCTGGCGGTGTCTGGCGCT 1481
consensus_7399#2      TTGCCCCCCCCCCCAACTTGCATCCACTTGTCAGGCCGGTGTCTGGCGGTGTCTGGCGCT 267
consensus_7399#1      CAAACCGAAACACACACACACAAACGCTTATAAAA----TACCAGAAACCAGCCAGC-CG 341
                          **    *    **   **  * *** * *      *  * *       *  ** * 

consensus_7399#0      TTGATGCTTGCAGCACACATCGAATGCGTAAAAGGGCACCGGCTACGGCTTGTGTTAGAA 1541
consensus_7399#2      TTGATGCTTGCAGCACACATCGAATGCGTAAAAGGGCACCGGCTCCGGCTTATGTTAGAA 327
consensus_7399#1      CCACAGGAGGAGGGATTCAATCGTCGCCTCGTTTGCCATCA-CGCCCGTGTGTGTCTGTG 400
                           *   *  * *  **      ** *     * ** *  *  * *  * ***  *  

consensus_7399#0      -GTTTCGATCTCGTTTTCCTCCCCCGTCCCGGTCACACGCCATTGTGTCATGGTGGCGTT 1600
consensus_7399#2      -GTTTCGATCTCGTTTTCCTTCCCCGTCCCGGTCACACGCCATTGTGTCATGGTGGCGTT 386
consensus_7399#1      TGTGTCTGTGTGTGTGTGTGCCTTAAAGCCAGACTGAAAATCTCGAACCTCAACAGGGGG 460
                       ** **  * *   * *    *      ** * *  *     * *   *      * *  

consensus_7399#0      GTTAGTGTCCTTTTTGTTGTTGTTGTTTGTTCTGCCAAAGCGAAATTCGCGATGC-CGTA 1659
consensus_7399#2      GTTAGTGTCCTTTTTGTTGTTGTTGTTTGTTCTGTTGTTTGTTCCCCCCCCCCTC-TCTC 445
consensus_7399#1      AAGAGTATTGCATGCGCGCCTGCAATGT-TTGTACAGAAACAGCACACACAGGGCGTGGT 519
                         *** *    *  *    **   * * ** *              * *    *     

consensus_7399#0      GCAACCCGC---GGGCAAGGCGACCCATTGGTGTCGGTGATAGATGCATGAAATGGGGGG 1716
consensus_7399#2      TCTGGCCGTTCAGTGTAATAGTAAATGCTAATTTGGATAGCCAACCTTTCCTAAACACAC 505
consensus_7399#1      GCAAAGAAGAAAAAGAAAAGGGAGGTAAAAAAAGAAAT-ACCAATGTGCGAAACACACTG 578
                       *            * **    *              *     *        *       

consensus_7399#0      AAA-ACACAGTAGGAACACCTA-CAAAGA--ACAGATTTTTGTAGGTAG--ATTTCTTAC 1770
consensus_7399#2      ACACACACATTATGCTTTCTGGTCAATCA--ATCCATTCCCGGGCGCAGCAATTTCTGTT 563
consensus_7399#1      TGA-ACACTGTAT-CGTGTTTAGTAAAGGCTACAAACTTATTAAGAGAG----------- 625
                        * ****  **            **     *   * *         **           

consensus_7399#0      ACGTTTC-CCCACC---------------------- 1783
consensus_7399#2      GTGTCGGACTTATCGTATTTTTTAAATATGTATGAT 599
consensus_7399#1      ------------------------------------
                                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)