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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7408#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1904 fasta sequence
[CCGCCCACGCGTCCGCGGGTGACGGTGTCAACGACGCGCCCGCCCTGAAGAAGGCCGAAATCGGTATCGCCATGGGTTCGGGTACCGCCGTCGCCAAGTCGGCCGCCGAGATGGTGCTGGCTGACGATAACTTCTCCTCCATCGTTGCCGCTGTTGAGGAAGGTCGTGCCATCTACAACAACATGAAGCAGTTCATCCGCTACCTGATCTCGTCCAACATTGGTGAGGTCGTGTCCATCTTCCTGACGGCCGCCCTGGGTCTGCCGGAAGCGCTCATCCCCGTCCAGCTGCTGTGGGTCAACCTGGTCACTGACGGTCTGCCAGCTACTGCCCTCGGCTTCAACCCACCGGATCTGGACATCATGACCAAGCCGCCGCGCAAGGCTGATGAAGGTTTGATCTCTGGCTGGTTGTTCTTCCGTTACATGGCCATTGGTGGATATGTCGGTTGCGCTACCGTTGGTGGTGCCGCCTGGTGGTTCATGTTCTCCGAGACTGGCCCGCAGCTGTCCTACTGGCAGCTGACTCACCATCTGTCCTGCCTGGGCGGTGGCGAGGAGTTCAAGGGTATTGACTGCAAGATCTTCAACGACCCGCACCCAATGACCATGGCTCTGTCCGTGCTGGTCACCATTGAGATGTTGAACGCCATGAACAGCTTGTCTGAGAACCAGTCCCTTGTCCAGATGCCGCCATGGTGCAACATTTGGCTGATTGCCTCCATGTGTCTGTCGTTCGCTCTCCACTTCGTCATCCTCTACGTTGACGTTCTTTCCACCGTTTTCCAAGTCACTCCACTAGACGGAAATGAGTGGATGACCGTCATGAAGTTCTCGCTGCCGGTCGTGCTGCTGGATGAGATCCTGAAGTTCGTCGCCAGAAGGATTTCGGACGTCAATCCAGATTTCCATTAAAGACAGTTTCAAAATAAATAAAAAATAAACCCAAAAAATTATAAATCAAACCACCACCACCAACCACCCACTCACATATAATAAACAGAACAGAAAAAAAACCTAAAAAACTCCCTCGCGTGTGTGTGTGTCATGATCATCCTGCCTCCCATGTGGACGGCGGTCTTCCAAGTCTTCCAAAGCGTGTGTGTGAGTGTGTGTTCGTTCCCAAAAATGCCCCATTTTGTCCCTTCTTTTCTCCGTCATTATGACGTGTCTCGTTATAATGAACCCCCGGGAATGCTTGCTTCGTCCTTTGTGGGTTGGAAAGGAAGTGTGAACGAAAGGAGGGGACCGGAACCTCAATGTCCCCAGCATCCATAGCCTACAACTTGAAAGAGAGAGAGAGACAGAGACAGAGAGAGAGAGAGAGAGAGACAGA---AGAGCCCCTCAATGCCCTTTTTTTAATGCCCTCTTTGGGATGACTACTGATCGCGTTGCATTCATCCTCCCGGGTGGGGGAACAAGTGACAAAGTGAGTCAGGAGGGAGGAGATAAAGAAAGCACAACAATGGAAAAAAGAGCCCCTCTGCTGATGGAAAGGCCCTCCCCTCGAGTGTCCTGGTGACCGGGTGTGATTGCTTGTTCCTCTTTGGAGTTTGATCTCTCTCTCTCTTTCTCTCTCTCTGGGCGGGTGATTGGCTACAATAGCTTTGGAAGAACTTGATCGCAACTTTCGGTGCGATATCCTGAGACACCCCCCATCCCTGTGATCATCCAGCTTTATTGTCGGCGGCCACACAACTTAAAAGCTCCCCGTTCTTACAATCCCCCGCAATAAACAACCACCACACGAGGGCGCGCGAGCGTGAGTGTGTCCCCCCTCAACCTTTGTGATTGCTTTTCTCTCATCAACTCGCTCAAACACTCCCCCCCCCCAACAAAACCAAACAACAACACCACGCCAAATGTGAAGAGAAATAAAATCGTGTGTATGTGTGTGTCTTATGT]
[+] EMBL BM655890 [CCGCCCACGCGTCCGCGGGTGACGGTGTCAACGACGCGCCCGCCCTGAAGAAGGCCGAAATCGGTATCGCCATGGGTTCGGGTACCGCCGTCGCCAAGTCGGCCGCCGAGATGGTGCTGGCTGACGATAACTTCTCCTCCATCGTTGCCGCTGTTGAGGAAGGTCGTGCCATCTACAACAACATGAAGCAGTTCATCCGCTACCTGATCTCGTCCAACATTGGTGAGGTCGTGTCCATCTTCCTGACGGCCGCCCTGGGTCTGCCGGAAGCGCTCATCCCCGTCCAGCTGCTGTGGGTCAACCTGGTCACTGACGGTCTGCCAGCTACTGCCCTCGGCTTCAACCCACCGGATCTGGACATCATGACCAAGCCGCCGCGCAAGGCTGATGAAGGTTTGATCTCTGGCTGGTTGTTCTTCCGTTACATGGCCATTGGTGGATATGTCGGTTGCGCTACCGTTGGTGGTGCCGCCTGGTGGTTCATGTTCTCCGAGACTGGCCCGCAGCTGTCCTACTGGCAGCTGACTCACCATCTGTCCTGCCTGGGCGGTGGCGAGGAGTTCAAGGGTATTGACTGCAAGATCTTCAACGACCCGCACCCAATGACCATGGCTCTGTCCGTGCTGGTCACCATTGAGATGTTGAACGCCATGAACAGCTTGTCTGAGAACCAGTCCCTTGTCCAGATGCCGCCATGGTGCAACA ]
[+] EMBL BM618402 [ ccgGATCTCTGGCTGGTTGTTCTTCCGTTACATGGCCATTGGTGGATATGTCGGTTGCGCTACCGTTGGTGGTGCCGCCTGGTGGTTCATGTTCTCCGAGACTGGCCCGCAGCTGTCCTACTGGCAGCTGACTCACCATCTGTCCTGCCTGGGCGGTGGCGAGGAGTTCAAGGGTATTGACTGCAAGATCTTCAACGACCCGCACCCAATGACCATGGCTCTGTCCGTGCTGGTCACCATTGAGATGTTGAACGCCATGAACAGCTTGTCTGAGAACCAGTCCCTTGTCCAGATGCCGCCATGGTGCAACATTTGGCTGATTGCCTCCATGTGTCTGTCGTTCGCTCTCCACTTCGTCATCCTCTACGTTGACGTTCTTTCCACCGTTTTCCAAGTCACTCCACTAGACGGAAATGAGTGGATGACCGTCATGAAGTTCTCGCTGCCGGTCGTGCTGCTGGATGAGATCCTGAAGTTCGTCGCCAGAAGGATTTCGGACGTCAATCCAGATTTCCATTAAAGACAGTTTCAAAATAAATAAAAAATAAACCCAAAAAATTATAAATCAAACCACCACCACCAACCACCCACTCACATATAATAAACAGAACAGAAAAAAAACCTAAAAAACTCCCTCGCGTGTGTGTGTGTCATGATCATCCTGCCTCCCATGTGGACGGCGG ]
[+] EMBL BM638010 [ ccGGGTATTGACTGCAAGATCTTCAACGATCCGCACCCAATGACCATGGCTCTGTCCGTGCTGGTCACCATTGAGATGTTGAACGCCATGAACAGCTTGTCTGAGAACCAGTCCCTTGTCCAGATGCCGCCATGGTGCAACATTTGGCTGATTGCCTCCATGTGTCTGTCGTTTGCTCTCCACTTCGTCATCCTCTACGTTGACGTTCTTTCCACCGTTTTCCAAGTCACTCCACTGGACGGAAATGAGTGGATGACCGTCATGAAGTTCTCGCTGCCGGTCGTGCTGCTGGATGAGATCCTGAAGTTCGTCGCCAGAAGGATTTCGGACGTCAATCCAGATTTCCATTAAAGACAGTTTCAAAATAAATAAAAAATAAACCC ]
[+] EMBL BM617842 [ ccgCAATGACCATGGCTCTGTCCGTGCTGGTCACCATTGAGATGTTGAACGCCATGAACAGCTTGTCTGAGAACCAGTCCCTTGTCCAGATGCCGCCATGGTGCAACATTTGGCTGATTGCCTCCATGTGTCTGTCGTTCGCTCTCCACTTCGTCATCCTCTACGTTGACGTTCTTTCCACCGTTTTCCAAGTCACTCCACTAGACGGAAATGAGTGGATGACCGTCATGAAGTTCTCGCTGCCGGTCGTGCTGCTGGATGAGATCCTGAAGTTCGTCGCCAGAAGGATTTCGGACGTCAATCCAGATTTCCATTAAAGACAGTTTCAAAATAAATAAAAAATAAACCCAAAAAATTATAAATCAAACCACCACCACCAACCACCCACTCACATATAATAAACAGAACAGAAAAAAAACCTAAAAAACTCCCTCGCGTGTGTGTGTGTCATGATCATCCTGCCTCCCATGTGGACGGCGGTCTTCCAAGTCTTCCAAAGCGTGTGTGTGAGTGTGTGTTCGTTCCCAAAAATGCCCCATTTTGTCCCTTCTTTTCTCCGTCATTATGACGTGTCTCGTTATAATGAACCCCCGGGAATGCTTGCTTCGTCCTTTGTGGGTTGGAAAGGAAGTGTGAACGAAAGGAGGGGACCGGAACCTCAATGTCCCCAGCATCCATAGCCTACAACTTGAAAGAGAGAGAGAGACAGAGACAGAGAGAGAGAGAGAGAGAGACAGA AGAGCCCCTCAATGCCCTTTTTTTAATGCCCTCTTTGGGATGACTACTG ]
[+] EMBL BM647333 [ ATTATAAATCAAACCACCACCACCAACCACCCACTCACATATAATAAACAGAACAGAAAAAAAACCTAAAAAACTCCCTCGCGTGTGTGTGTGTCATGATCATCCTGCCTCCCATGTGGACGGCGGTCTTCCAAGTCTTCCAAAGCGTGTGTGTGAGTGTGTGTTCGTTCCCAAAAATGCCCCATTTTGTCCCTTCTTTTCTCCGTCATTATGACGTGTCTCGTTATAATGAACCCCCGGGAATGCTTGCTTCGTCCTTTGTGGGTTGGAAAGGAAGTGTGAACGAAAGGA GGGACCGGACCCTCAATGTCCCCAGCATCCATAGCCTACAACTTGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCCT AATG CTTTTTTTAATGTCCTCTTTGGGATGACTACTGATCGCGTTGCATTCATCCTCCCGGGTGGGGGAACAAGTGACAAAGTGAGTCAGGAGGGAGGAGATAAAGAAAGCACAACAATGGAAAAAAGAGCCCCTCTGCTGATGGAAAGGCCCTCCCCTCGAGTGTCCTGGTGACCGGGTGTGATTGCTTGTTCCTCTTTGGAGTTTGATCTCTCTCTCTCTTTCTCTCTCTCTGGGCGGGTGATTGGCTACAATAGCTTTGGAAGAACTTGATCGCAACTTTCGGTGCGATATCC ]
[+] EMBL BM652441 [ ccGGCTACAATAGCTTTGGAAGAACTTGATCGCAACTTTCGGTGCGATATCCTGAGACACCCCCCATCCCTGTGATCATCCAGCTTTATTGTCGGCGGCCACACAACTTAAAAGCTCCCCGTTCTTACAATCCCCCGCAATAAACAACCACCACACGAGGGCGCGCGAGCGTGAGTGTGTCCCCCCTCAACCTTTGTGATTGCTTTTCTCTCATCAACTCGCTCAAACACTCCCCCCCCCCAACAAAACCAAACAACAACACCACGCCAAATGTGAAGAGAAATAAAATCGTGTGTATGTGTGTGTCTTATGT]
consensusID : consensus_7408#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 72 fasta sequence
[TGGGCAGCATCTGCGCATAACTCCACGACAATCGATGATGGTCCTCGTTTTTCCCACCTGTGGCTTACTGGT]
[+] EMBL AL935023 [TGGGCAGCATCTGCGCATAACTCCACGACAATCGATGATGGTCCTCGTTTTTCCCACCTGTGGCTTACTGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7408#0 CCGCCCACGCGTCCGCGGGTGACGGTGTCAACGACGCGCCCGCCCTGAAGAAGGCCGAAA 60
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 TCGGTATCGCCATGGGTTCGGGTACCGCCGTCGCCAAGTCGGCCGCCGAGATGGTGCTGG 120
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 CTGACGATAACTTCTCCTCCATCGTTGCCGCTGTTGAGGAAGGTCGTGCCATCTACAACA 180
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 ACATGAAGCAGTTCATCCGCTACCTGATCTCGTCCAACATTGGTGAGGTCGTGTCCATCT 240
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 TCCTGACGGCCGCCCTGGGTCTGCCGGAAGCGCTCATCCCCGTCCAGCTGCTGTGGGTCA 300
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 ACCTGGTCACTGACGGTCTGCCAGCTACTGCCCTCGGCTTCAACCCACCGGATCTGGACA 360
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 TCATGACCAAGCCGCCGCGCAAGGCTGATGAAGGTTTGATCTCTGGCTGGTTGTTCTTCC 420
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 GTTACATGGCCATTGGTGGATATGTCGGTTGCGCTACCGTTGGTGGTGCCGCCTGGTGGT 480
consensus_7408#1 ---------------------------------------TGGGCAGCATCTGCGCATAAC 21
* ** * * * *
consensus_7408#0 TC-ATGTTCTCCGAGACTGGCCCGCAGCTGTCCTACTGGCAGCTGACTCACCATCTGTCC 539
consensus_7408#1 TCCACGACAATCGATGATGGTCCTCGTTTTTCCCACCTGTGGCTTACTGGT--------- 72
** * * *** *** ** * * *** ** * *** ***
consensus_7408#0 TGCCTGGGCGGTGGCGAGGAGTTCAAGGGTATTGACTGCAAGATCTTCAACGACCCGCAC 599
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 CCAATGACCATGGCTCTGTCCGTGCTGGTCACCATTGAGATGTTGAACGCCATGAACAGC 659
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 TTGTCTGAGAACCAGTCCCTTGTCCAGATGCCGCCATGGTGCAACATTTGGCTGATTGCC 719
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 TCCATGTGTCTGTCGTTCGCTCTCCACTTCGTCATCCTCTACGTTGACGTTCTTTCCACC 779
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 GTTTTCCAAGTCACTCCACTAGACGGAAATGAGTGGATGACCGTCATGAAGTTCTCGCTG 839
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 CCGGTCGTGCTGCTGGATGAGATCCTGAAGTTCGTCGCCAGAAGGATTTCGGACGTCAAT 899
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 CCAGATTTCCATTAAAGACAGTTTCAAAATAAATAAAAAATAAACCCAAAAAATTATAAA 959
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 TCAAACCACCACCACCAACCACCCACTCACATATAATAAACAGAACAGAAAAAAAACCTA 1019
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 AAAAACTCCCTCGCGTGTGTGTGTGTCATGATCATCCTGCCTCCCATGTGGACGGCGGTC 1079
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 TTCCAAGTCTTCCAAAGCGTGTGTGTGAGTGTGTGTTCGTTCCCAAAAATGCCCCATTTT 1139
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 GTCCCTTCTTTTCTCCGTCATTATGACGTGTCTCGTTATAATGAACCCCCGGGAATGCTT 1199
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 GCTTCGTCCTTTGTGGGTTGGAAAGGAAGTGTGAACGAAAGGAGGGGACCGGAACCTCAA 1259
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 TGTCCCCAGCATCCATAGCCTACAACTTGAAAGAGAGAGAGAGACAGAGACAGAGAGAGA 1319
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 GAGAGAGAGAGACAGAAGAGCCCCTCAATGCCCTTTTTTTAATGCCCTCTTTGGGATGAC 1379
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 TACTGATCGCGTTGCATTCATCCTCCCGGGTGGGGGAACAAGTGACAAAGTGAGTCAGGA 1439
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 GGGAGGAGATAAAGAAAGCACAACAATGGAAAAAAGAGCCCCTCTGCTGATGGAAAGGCC 1499
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 CTCCCCTCGAGTGTCCTGGTGACCGGGTGTGATTGCTTGTTCCTCTTTGGAGTTTGATCT 1559
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 CTCTCTCTCTTTCTCTCTCTCTGGGCGGGTGATTGGCTACAATAGCTTTGGAAGAACTTG 1619
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 ATCGCAACTTTCGGTGCGATATCCTGAGACACCCCCCATCCCTGTGATCATCCAGCTTTA 1679
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 TTGTCGGCGGCCACACAACTTAAAAGCTCCCCGTTCTTACAATCCCCCGCAATAAACAAC 1739
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 CACCACACGAGGGCGCGCGAGCGTGAGTGTGTCCCCCCTCAACCTTTGTGATTGCTTTTC 1799
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 TCTCATCAACTCGCTCAAACACTCCCCCCCCCCAACAAAACCAAACAACAACACCACGCC 1859
consensus_7408#1 ------------------------------------------------------------
consensus_7408#0 AAATGTGAAGAGAAATAAAATCGTGTGTATGTGTGTGTCTTATGT 1904
consensus_7408#1 ---------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||