cluster # 7411

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Anopheles gambiae
cluster # 7411 cluster # 7411 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7411#0 length = 790 sequences # 5

consensus_7411#1 length = 688 sequences # 2

consensusID : consensus_7411#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 790
fasta sequence

                              [CCGCGGACG-GTGAAGCTTTCGGTAGTGTCCGGTAGTCAGTCCATAGCGAAAGCGTGTCAAATTATCACATGATGCTGTTTGGAGGTGTTAAAGTGCTCCGTGTATCGGGTCCTCCGTTGTTCTTTGTTTTATTGTGGATGGTACATAGTGTTGTTGGGCTTGATCTCAACGCAAACTGTGTAACTCCGTTGGGAGAGTCAGGAAAGTGTATTCTGTTCCGAGAGTGCCAACCACTGATCACCATCTACAACAAACCGATAAACACTCACGATGATACACTGCTACTAACGCAAAGCCGGTGCGGTATGCTGCAGCGAAAAACGCTGGTATGCTGCCCCGTGACCAGCCAGGCCAGGTCTTCCCTACCCGAACCGCCGGTTTGTGGCATTCATCTGGCCGATCGGGTGATTGGTGGGCAGCCAACGCAAATCGACGAGTTCCCATGGACGGCACTGATCGAGTTCCAGAAACCGGACGGTAGCTTTGGCTTCCACTGCGGAGGATCGTTGATCAATGACCGGTACATCGTGACAGCAGCCCAC-TGTATTAAATCCATTCCACGCGGCTGGAAGGTCCATCGGGTGCGTCTTGGTGAGTGGGATTTGACATCGGCAAACGATTGTCAGAATGAGTTCTGTTCGGATGCACCGATCGATCTGGACATTGAGCAGATTGTCGTCCACACTGGCTACGATACGAAGGATCAAAGCAATGCG-AACGATATCGCGCTAATACGCTTCACCCGGCCGGTAAACTACTCACAAACCGTGCGGCCTATCTGTTTGCCACT]

[+] EMBL BM600615             [CCGCGGACGCGTG GGCTTTCGGTAGTGTCCGGTAGTCAGTCCATAGCGAAAGCGTGTCAAATTATCACATGATGCTGTTTGGAGGTGTTAAAGTGCTCCGTGTATCGGGTCCTCCGTTGTTCTTTGTTTTATTGTGGATGGTACATAGTGTTGTTGGGCTTGATCTCAACGCAAACTGTGTAACTCCGTTGGGAGAGTCAGGAAAGTGTATTCTGTTCCGAGAGTGCCAACCACTGATCACCATCTACAACAAACCGATAAACACTCACGATGATACACTGCTACTAACGCAAAGCCGGTGCGGTATGCTGCAGCGAAAAACGCTGGTATGCTGCCCCGTGACCAGCCAGGCCAGGTCTTCCCTACCCGAACCGCCGGTTTGTGGCATTCATCTGGCCGATCGGGTGATTGGTGGGCAGCCAACGCAAATCGACGAGTTCCCATGGACGGCACTGATCGAGTTCCAGAAACCGGACGGTAGCTT                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM587815             [       cc GTGAACCTTTCGGTAGTGTCCGGTAGTCAGTCCATAGCGAAAGCGTGTCAAATTATCACATGATGCTGTTTGGAGGTGTTAAAGTGCTCCGTGTATCGGGTCCTCCGTTGTTCTTTGTTTTATTGTGGATGGTACATAGTGTTGTTGGGCTTGATCTCAACGCAAACTGTGTAACTCCGTTGGGAGAGTCAGGAAAGTGTATTCTGTTCCGAGAGTGCCAACCACTGATCACCATCTACAACAAACCGATAAACACTCACGATGATACACTGCTACTAACGCAAAGCCGGTGCGGTATGCTGCAGCGAAAAACGCTGGTATGCTGCCCCGTGACCAGCCAGGCCAGGTCTTCCCTACCCGAACCGCCGGTTTGTGGCATTCATCTGGCCGATCGGGTGATTGGTGGGCAGCCAACGCAAATCGACGAGTTCCCATGGACGGCACTGATCGAGTTCCAGAAACCGGACGGTAGCTTTGGCTTCCACTGCGGAGGATCGTTGATCAATGACCGGTACATCGTGACAGCAGCCCAC TGTATTAAATCCATTCCACGCGGCTGGAAGGTCCATCGGGTGCGTCTTGGTGAGTGGGATTTGACATCGGCAAACGATTGTCAGAATGAGTTCTGTTCGGATGCACCGATCGATCTGGACATTGAGCAGATTGTCGTCCACACTGGCTACGATACGAAGGATCAAAGCAATGCGAAACGATATC                                                                 ]
[+] EMBL CNS09DVT             [       gg tTGAA CTTTCGGTAGTG       GTCGGTCCATAGCGGAAG GTGTCAAATTATCACATGATGCTGTTTGGAGGTGTTAAAGTGCTCCGTGTATCGGGTCCTCCGTTGTTCTTTGTTTTATTGTGGATGGTACATAGTGTTGTTGGGCTTGATCTCAACGCAAACTGTGTGACTCCGTTGGGAGAGTCAGGAAAGTGTATTCTGTTCCGAGAGTGCCAACCACTGATCACCATCTACAATAAACCGATAAACACTCACGATGATACACTGCTACTAACGCAAAGCCGGTGTGGTATGCTGCAGCGAAAAACGCTGGTATGCTGCCCCGTGACCAGCCAGGCCAGGTCTTCCCTACCCGAACCGCCGGTTTGTGG AATCATCTGGCCGATCGGGTGATTGGTGGGCAGCCAACGCAAATCGACGAGTTCCCATGGACGGCACTGATCGAGTTCCAGAAACCGGACGGCAGCTTTGGCTTCCACTGCGGAGGATCGTTGATCAATGACCGGTACATCGTGACAGCAGCCCACTTGTATTAAATCCATTCCACGCGGCTGGAAGGTCCATCGGGTGCGTCTTGGTGAGTGGGATTTGACATCGGCAAACGATTGTCAGAATGAGTTCTGTTCGGATGCAC                                                                                                                                               ]
[+] EMBL CNS09BM8             [                                                                                                                                                                                                                                                                                                                                                                                       CCGGTTTGTGGCATTCATCTGGCCGATCGGGTGATTGGTGGGCAGCCAACGCAAATCGACGAGTTCCCATGGACGGCACTTATCGAGTTCCAGAAACCGGACGGCAGCTTTGGCTTCCACTGCGGAGGATCGTTGATCAATGACCGGTACATCGTGACAGCAGCCCAC TGTATTAAATCCATTCCACGCGGCTGGAAGGTCCATCGGGTGCGTCTTGGTGAGTGGGATTTGACATCGGCAAACGATTGTCAGAATGAGTTCTGTTCGGATGCACCGATCGATCTGGACATTGAGCAGATTGTCGTCCACACTGGCTACGATACGAAGGATCAAAGCAATGCG AACGATATCGCGCTAATACGCTTCACCCGGCCGGTAAACTACTCACAAACCGTGCGGCCTATCTGTTTGCCACT]
[-] EMBL CNS09BM9             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAGGATCGTTGATCAATGACCGGTACATCGTGACAGCAGCCCAC TGTATTAAATCCATTCCACGCGGCTGGAAGGTCCATCGGGTGCGTCTTGGTGAGTGGGATTTGACATCGGCAAACGATTGTCAGAATGAGTTCTGTTCGGATGCACCGATCGATCTGGACATTGAGCAGATTGTCGTCCACACTGGCTACGATACGAAGGATCAAAGCAATGCG AACGATATCGC                                                               ]




>consensus_7411#0
CCGCGGACGGTGAAGCTTTCGGTAGTGTCCGGTAGTCAGTCCATAGCGAAAGCGTGTCAA
ATTATCACATGATGCTGTTTGGAGGTGTTAAAGTGCTCCGTGTATCGGGTCCTCCGTTGT
TCTTTGTTTTATTGTGGATGGTACATAGTGTTGTTGGGCTTGATCTCAACGCAAACTGTG
TAACTCCGTTGGGAGAGTCAGGAAAGTGTATTCTGTTCCGAGAGTGCCAACCACTGATCA
CCATCTACAACAAACCGATAAACACTCACGATGATACACTGCTACTAACGCAAAGCCGGT
GCGGTATGCTGCAGCGAAAAACGCTGGTATGCTGCCCCGTGACCAGCCAGGCCAGGTCTT
CCCTACCCGAACCGCCGGTTTGTGGCATTCATCTGGCCGATCGGGTGATTGGTGGGCAGC
CAACGCAAATCGACGAGTTCCCATGGACGGCACTGATCGAGTTCCAGAAACCGGACGGTA
GCTTTGGCTTCCACTGCGGAGGATCGTTGATCAATGACCGGTACATCGTGACAGCAGCCC
ACTGTATTAAATCCATTCCACGCGGCTGGAAGGTCCATCGGGTGCGTCTTGGTGAGTGGG
ATTTGACATCGGCAAACGATTGTCAGAATGAGTTCTGTTCGGATGCACCGATCGATCTGG
ACATTGAGCAGATTGTCGTCCACACTGGCTACGATACGAAGGATCAAAGCAATGCGAACG
ATATCGCGCTAATACGCTTCACCCGGCCGGTAAACTACTCACAAACCGTGCGGCCTATCT
GTTTGCCACT

consensusID : consensus_7411#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 688
fasta sequence

                              [CCGGAGCGGTTGAATCCTCTGGTAGTGTTCAGTTCATAAGGAGAGCGTGTCAGTTTTTCACATGATGCTGTTTGGAGGTGTTCAAGTGTCCCGTGTACCGGGTGCTCCGTTGTTCTTTGTGTTATTGTGGATTGGACATGTTTTTGGGCTAGAACCAGTAAGTAGTACCCAGAACACATCTTCCCTACCCGAATCACCGCATTGTGGCATTCAGCTGGGTGATCGGGTGCTCAGTGGGCAGTCAACGCAAATCGACGAGTTCCCATGGACGGCACTGATCGAGTTCCAGAAACCGGACGGTAGTTTTGGCTTCCACTGCGGAGGATCGTTGATCAATGACCGGTACATCGTGACAGCAGCCCACTGTATTAAATCCATTCCACGCGATTGGAAGGTCCAACGGGTGCGTCTTGGTGAGTGGGATTTGACATCGGCAAACGATTGTCAGAATGAGTTCTGTTCGGATGCACCGATCGATCTGGACATTGAGCAGATTGTTGTCCATACCGGTTACGATACGAAGGATAAGAGCAATGCGAACGATATCGCGCTAATACGCTTCACCCGGCCGGTAAACTACTCACAAACCGTGCGGGCTATCTGTTTGCCCCTGAGCAGCTCACTTCGCAACCGTAGCCATGATGGGCTGATCAGCTACGAGGTTGGCTGGAGGAAAAACAATTCGGCA]

[+] EMBL BM640768             [CCGGAGCGGTTGAATCCTCTGGTAGTGTTCAGTTCATAAGGAGAGCGTGTCAGTTTTTCACATGATGCTGTTTGGAGGTGTTCAAGTGTCCCGTGTACCGGGTGCTCCGTTGTTCTTTGTGTTATTGTGGATTGGACATGTTTTTGGGCTAGAACCAGTAAGTAGTACCCAGAACACATCTTCCCTACCCGAATCACCGCATTGTGGCATTCAGCTGGGTGATCGGGTGCTCAGTGGGCAGTCAACGCAAATCGACGAGTTCCCATGGACGGCACTGATCGAGTTCCAGAAACCGGACGGTAGTTTTGGCTTCCACTGCGGAGGATCGTTGATCAATGACCGGTACATCGTGACAGCAGCCCACTGTATTAAATCCATTCCACGCGATTGGAAGGTCCAACGGGTGCGTCTTGGTGAGTGGGATTTGACATCGGCAAACGATTGTCAGAATGAGTTCTGTTCGGATGCACCGATCGATCTGGACATTGAGCAGATTGTTGTCCATACCGGTTACGATACGAAGGATAAGAGCAATGCGAACGATATCGCGCTAATACGCTTCACCCGGCCGGTAAACTACTCACAAACCGTGCGGGCTATCTGTTTGCCCCTGAGCAGCTCACTTCGCAACCGTAGCCATGATGGGCTG                                       ]
[+] EMBL BM590080             [                                             ccgGTCAGTTTTTCACATGATGCTGTTTGGAGGTGTTCAAGTGTCCCGTGTATCGGGTGTTCCGTTGTTCTTTGTGTTATTGTGGATTGGACATGTTTTTGGGTTAGAACCAGTAAGTAGTACCCAGAACACATCTTCCCTACCCGAATCACCGCATTGTGGCATTCAGCTGGGTGATCGGGTGCTCAGCGGGCAGTCAACGCAAATCGACGAGTTCCCATGGACGGCACTGATCGAGTTCCAGAAACCGGACGGCAGCTTTGGCTTCCACTGCGGAGGATCGTTGATCAATGACCGGTACATCGTGACAGCAGCCCACTGTATTAAATCCATTCCACGCGATTGGAAGGTCCATCGGGTGCGTCTTGGTGAGTGGGATTTGACATCGGCAAACGATTGTCAGAATGAGTTCTGTTCGGATGCACCGATCGATCTGGACATTGAGCAGATTGTTGTCCATACCGGTTACGATACGAAGGATAAGAGCAATGCGAACGATATCGCGCTAATACGCTTCACCCGGTCGGTAAACTACTCACAAACCGTGCGGCCTATCTGTTTGTCCCTGAGCAGCTCACTTCGCAACCGTAGCCATGATGGGCTGATCAGCTACGAGGTTGGCTGGAGGAAAAACAATTCGGCA]




>consensus_7411#1
CCGGAGCGGTTGAATCCTCTGGTAGTGTTCAGTTCATAAGGAGAGCGTGTCAGTTTTTCA
CATGATGCTGTTTGGAGGTGTTCAAGTGTCCCGTGTACCGGGTGCTCCGTTGTTCTTTGT
GTTATTGTGGATTGGACATGTTTTTGGGCTAGAACCAGTAAGTAGTACCCAGAACACATC
TTCCCTACCCGAATCACCGCATTGTGGCATTCAGCTGGGTGATCGGGTGCTCAGTGGGCA
GTCAACGCAAATCGACGAGTTCCCATGGACGGCACTGATCGAGTTCCAGAAACCGGACGG
TAGTTTTGGCTTCCACTGCGGAGGATCGTTGATCAATGACCGGTACATCGTGACAGCAGC
CCACTGTATTAAATCCATTCCACGCGATTGGAAGGTCCAACGGGTGCGTCTTGGTGAGTG
GGATTTGACATCGGCAAACGATTGTCAGAATGAGTTCTGTTCGGATGCACCGATCGATCT
GGACATTGAGCAGATTGTTGTCCATACCGGTTACGATACGAAGGATAAGAGCAATGCGAA
CGATATCGCGCTAATACGCTTCACCCGGCCGGTAAACTACTCACAAACCGTGCGGGCTAT
CTGTTTGCCCCTGAGCAGCTCACTTCGCAACCGTAGCCATGATGGGCTGATCAGCTACGA
GGTTGGCTGGAGGAAAAACAATTCGGCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7411#0      CCGCGGACGGTGAAGCTTTCGGTAGTGTCCGGTAGTCAGTCCATAGCGAAAGCGTGTCAA 60
consensus_7411#1      ------------------------------------------------------------
                                                                                  

consensus_7411#0      ATTATCACATGATGCTGTTTGGAGGTGTTAAAGTGCTCCGTGTATCGGGTCCTCCGTTGT 120
consensus_7411#1      ------------------------------------------------------------
                                                                                  

consensus_7411#0      TCTTTGTTTTATTGTGGATGGTACATAGTGTTGTTGGGCTTGATCTCAACG--CAAACTG 178
consensus_7411#1      -------------------------------------------CCGGAGCGGTTGAATCC 17
                                                                  *  * **    **   

consensus_7411#0      TGTAACTCCGTTGGGAGAGTCAGGAAAGTGTATTCTGTTCCGAGAGTGCCAACCACTGAT 238
consensus_7411#1      TCTGGTAGTGTTCAGTTCATAAGGAGAGCGTGT-CAGTTTTTCACATGATGCTGTTTGGA 76
                      * *      ***  *    * **** ** ** * * ***       **        **  

consensus_7411#0      CACCATCTACAACAAACCGATAAACACTCACGATGATACACTGCTACTAACGCAAA-GCC 297
consensus_7411#1      G---GTGTTCAAGTGTCCCGTGTACCG----GGTGCTCCGTTGTTCTTTGTGTTATTGTG 129
                           * * ***    **  *  **      * ** * *  ** *  *   *  *  *  

consensus_7411#0      GGTGCGGTATGCTGCAGCGAAAAACGCTGGTATGCTGCCCCGTGACCAGCCAGGCCAGGT 357
consensus_7411#1      GATTGGACATGTTTTTGGGCTAGA-ACCAGTAAGTAGT---------ACCCAGAACACAT 179
                      * *  *  *** *   * *  * *  *  *** *  *          * ****  **  *

consensus_7411#0      CTTCCCTACCCGAACCGCCGGTTTGTGGCATTCATCTGGCCGATCGGGTGATTGGTGGGC 417
consensus_7411#1      CTTCCCTACCCGAATCACCGCATTGTGGCATTCAGCTGGGTGATCGGGTGCTCAGTGGGC 239
                      ************** * ***  ************ ****  ********* *  ******

consensus_7411#0      AGCCAACGCAAATCGACGAGTTCCCATGGACGGCACTGATCGAGTTCCAGAAACCGGACG 477
consensus_7411#1      AGTCAACGCAAATCGACGAGTTCCCATGGACGGCACTGATCGAGTTCCAGAAACCGGACG 299
                      ** *********************************************************

consensus_7411#0      GTAGCTTTGGCTTCCACTGCGGAGGATCGTTGATCAATGACCGGTACATCGTGACAGCAG 537
consensus_7411#1      GTAGTTTTGGCTTCCACTGCGGAGGATCGTTGATCAATGACCGGTACATCGTGACAGCAG 359
                      **** *******************************************************

consensus_7411#0      CCCACTGTATTAAATCCATTCCACGCGGCTGGAAGGTCCATCGGGTGCGTCTTGGTGAGT 597
consensus_7411#1      CCCACTGTATTAAATCCATTCCACGCGATTGGAAGGTCCAACGGGTGCGTCTTGGTGAGT 419
                      ***************************  *********** *******************

consensus_7411#0      GGGATTTGACATCGGCAAACGATTGTCAGAATGAGTTCTGTTCGGATGCACCGATCGATC 657
consensus_7411#1      GGGATTTGACATCGGCAAACGATTGTCAGAATGAGTTCTGTTCGGATGCACCGATCGATC 479
                      ************************************************************

consensus_7411#0      TGGACATTGAGCAGATTGTCGTCCACACTGGCTACGATACGAAGGATCAAAGCAATGCGA 717
consensus_7411#1      TGGACATTGAGCAGATTGTTGTCCATACCGGTTACGATACGAAGGATAAGAGCAATGCGA 539
                      ******************* ***** ** ** *************** * **********

consensus_7411#0      ACGATATCGCGCTAATACGCTTCACCCGGCCGGTAAACTACTCACAAACCGTGCGGCCTA 777
consensus_7411#1      ACGATATCGCGCTAATACGCTTCACCCGGCCGGTAAACTACTCACAAACCGTGCGGGCTA 599
                      ******************************************************** ***

consensus_7411#0      TCTGTTTGCCACT----------------------------------------------- 790
consensus_7411#1      TCTGTTTGCCCCTGAGCAGCTCACTTCGCAACCGTAGCCATGATGGGCTGATCAGCTACG 659
                      ********** **                                               

consensus_7411#0      -----------------------------
consensus_7411#1      AGGTTGGCTGGAGGAAAAACAATTCGGCA 688