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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7433#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1205 fasta sequence
[CCGCCGATCGTTAATCCGACCAACGAAAAAGTGATCTGTGACGTGGCGAATGCATCCAAAGCGGACGTTGACGATGCAGTTCAAGCCGCCGATGAAGCGTTCCGTGGCGTATGGACGTCCGTTTCGGCACGTGAGCGCGGTCAGCTGATGTACCGATTGGCAGAGCTGATGGAGCAGCACCGGGAGGAACTGGCAACGATTGAGTCGATCGATTCGGGTGCAGTTTACACGCTTGCACTGAAAACTCACGTCGGTATGTCGATCGATGCGTGGCGCTACTATGCTGGTTGGGCGGATAAGATCGAAGGTAGCACGATTCCGGTCAGCCCAGCCCGCCCGAATCGTGTGCTAACGTTCACGAAGAAGGAACCGATCGGTGTGTGCGCTTTAATTACACCCTGGAACTACCCACTGATGATGCTCTCGTGGAAGATGGCCGCTTGCATTGCCGCAGGCAACACGGTTGTGATTAAACCAGCCCAGGTGTGTCCCTTGACGGCACTAAAGTTTGCCGAGCTTACAGTAAGAGCCGGCTTTCCACCGGGAGTGATCAATGTCGTCACGGGTACGGGCTCGTTGGCCGGCCAAGCCCTTGCAGACCATCCAGCGGTGCGCAAACTGGGCTTCACCGGATCCACTCCAATCGGGAAACGCATCATGGCTTCGTGCGCCGAATCCAACATCAAAAAGTGCTCCATGGAGCTGGGCGGCAAGTCGCCGCTCGTCATCTTCGCCGACTGCGATCTCGAGAAGGCGGTCCGGCTCGGCATGTCGTCGGTGTTTTTCAACAAGGGTGAAAACTGTATTGCCGCTGGCCGGCTGTTTGTGGAGGACCGCATCCACGATGAGTTTGTGCGGAA-AGTGATCCGCGGCATAAAGACGATGAA---ACTTGGCGATCCACTCGACCGGGCGACGGCACATGGACCGCAGAACCATCGGGCACATCTAGAGAAGCTACAGGAGTACTGTGCTATCGGCGTGAAGGAGGGAGCGAAGCTACTGTACGGTGGCAAGCGGGTGCCCAAAATGG-AGGGACTGTTCTTCGAGCCGACCGTGTTTACCGACGTGGAGGATCACATGTACATTGCGCGCGAAGAATCGTTCGGTCCGATCATGGTGATATCGAAGTTTCACGCGAGTGATTTCGATGCGCTGGTGGCAAGGGCTAACAGTACCGAGTACGGGCTGGCGAGTGGTGTTTTCAC]
[+] EMBL BM622967 [CCGCCGATCGTTAATCCGACCAACGAAAAAGTGATCTGTGACGTGGCGAATGCATCCAAAGCGGACGTTGACGATGCAGTTCAAGCCGCCGATGAAGCGTTCCGTGGCGTATGGACGTCCGTTTCGGCACGTGAGCGCGGTCAGCTGATGTACCGATTGGCAGAGCTGATGGAGCAGCACCGGGAGGAACTGGCAACGATTGAGTCGATCGATTCGGGTGCAGTTTACACGCTTGCACTGAAAACTCACGTCGGTATGTCGATCGATGCGTGGCGCTACTATGCTGGTTGGGCGGATAAGATCGAAGGTAGCACGATTCCGGTCAGCCCAGCCCGCCCGAATCGTGTGCTAACGTTCACGAAGAAGGAACCGATCGGTGTGTGCGCTTTAATTACACCCT ]
[+] EMBL BX615724 [ GATGAAGCGTTCCGTGGCGTATGGACGTCCGTTTCGGCACGTGAGCGCGGTCAGCTGATGTACCGATTGGCAGAGCTGATGGAGCAGCACCGGGAGGAACTGGCAACGATTGAGTCGATCGATTCGGGTGCAGTTTACACGCTTGCACTGAAAACTCACGTCGGTATGTCGATCGATGCGTGGCGCTACTATGCTGGTTGGGCGGATAAGATCGAAGGTAGCACGATTCCGGTCAGCCCAGCCCGCCCGAATCGTGTGCTAACGTTCACGAAGAAGGAACCGATCGGTGTGTGCGCTTTAATTACACCCTGGAACTACCCACTGATGATGCTCTCGTGGAAGATGGCCGCTTGCATTGCCGCAGGCAACACGGTTGTGATTAAACCAGCCCAGGTGTGTCCCTTGACGGCACTAAAGTTTGCCGAGCTTACAGTAAGAGCCGGCTTTCCACCGGGAGTGATAAATGTCGTCACGGGTACGGGCTCGTTGGCCGGCCAAGCCCTTGCAGACCATCCAGCGGTGCGCAAACTGGGCTTCACCGGATCCACTCCAATCGGGAAACGCATCATGGCTTCGTGCGCCGAATCCAACATCAAAAAGTGCTCCATGGAGCTGGGCGGCAAGTCGCCGCTCGTCATCTTCGCCGACTGCGATCTCGAGAAGGCGGTCCGGCTCGGCATGTCGTCGGTGTTTTTCAACAAGGGTGAAAACTGTATTGCCGCTGGCCGGCTGTTTGTGGAGGACCGCATCCACGATGAGTTTGTGCGGAA AGTGATCCGCGGCATAAAGA ]
[+] EMBL BX607117 [ GAGTCGATCTATTCGGGTGCAGTTTACACGCTTGCACTGAAAACTCACGTCGGTATGTCGATCGATGCGTGGCGCTACTATGCTGGTTGGGCGGATAAGATCGAAGGTAGCACGATTCCGGTCAGCCCAGCCCGCCCGAATCGTGTGCTAACGTTCACGAAGAAGGAACCGATCGGTGTGTGCGCTTTAATTACACCCTGGAATTACCCACTGATGATGCTCTCGTGGAAGATGGCCGCTTGCATTGCCGCAGGCAACACGGTTGTGATTAAACCGGCTCAAGTATGTCCCTTGACGGCACTAAAGTTTGCCGAGCTTACAGTAAGAGCCGGCTTTCCACCGGGAGTGATCAATGTCGTCACCGGTAC ]
[+] EMBL BX605245 [ AGTGATCAAGGTCGTCACGGGTACGGGCTCGTTGGGCGGCCAAGCCCTTGCAGAACATCCAGCGGTGCGCAAACGGGGCTTCACCGGGTCCACTCCAATCGGGAAACG ]
[+] EMBL AL693530 [ CATCATGGCATCGTGCGCTGAATCCAACATCAAAAAGTGCTCCATGGAGCTGGGCGGCAAGTCGCCGCTCGTCATCTTCGCCGACTGCGATCTCGAGAAGGCGGTCCGGCTCGGCATGTCGTCGGTGTTTTTCAACAAGGGTGAAAACTGTATTGCCGCTGGCCGGCTG TTGTGGAGGACCGCATCCACGATGAGTTTGTGCGGAANAGTGATCCGCGGCATAAAGACGATGAACACACTTGGCGATCCACTCGACCGGGCGACGGCACATGGACCGCAGAACCATCGGGCACATCTAGAGAAGCTACAGGAGTACTGTGCTATCGGCGTGAAGGAGGGAGCGAAGCTACTGTACGGTGGCAAGCGGGTGCCCAAAATGGCAGGGACTGTTCTTCGAGCCGACCGTGTTTACCGACGTGGAGGATCACATGTACATTGCGCGCGAAGAATCGTTCGGTCCGATCATGGTGATATCGAAGTTTCACGCGAGTGATTTCGATGCGCTGGTGGCAAGGGCTAACAGTACCGAGTACGGGCTGGCGAGTGGTGTTTTCAC]
[+] EMBL BX605384 [ AGGGTGAAAACTGTATTGCCGCTGGCCGGCTGTTTGTGGAGGACCGCATCCACGATGAGTTTGTGCGGAA AGTGATCCGCGGCATAAAGACGAAGAA AATTGGCGATCCACTCGACCGGGCGACGGCACATGGACCGCAGAACCATCGGGTACATCTAGAGAAGCTACAGGAGTACTGTGCTATCGGCGTGAAGGAGGGAGCGAAGCTGCTGTACGGGGGCAAGCGGGGGCCCAAAATGG AGGGACTGTTCTTCGAGCCGACCGTGTTTAC ]
consensusID : consensus_7433#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 328 fasta sequence
[GCCAGAATCGCCAGAGGGTGTAGTTGGCCGGCCAAGCCCTGTCAGATATCCAGCCGTGCGCAAACTGGGCTTCACCGGGTCACTCCAATCGGGAAACGCATCATGGCATCGTGCGCCGAATCCAACATCAAAAAGTGCTCAATGGAGCTGGGCGGCAAGTCGCCGCTCGTCATCTTCGCCGACTGCGATCTCGAGAAGGCGGTCCGGCTCGGCATGTCGTCGCGCTGTNTTTCAACAAGGGTGAAAACTGTATTGCCGCTGGCCGGCTGTTTGTGGAGGACCGATCCAACGATTGAGTTTGTGCGGACAAGTGATCCGGCGGGAGTAC]
[+] EMBL BX466183 [GCCAGAATCGCCAGAGGGTGTAGTTGGCCGGCCAAGCCCTGTCAGATATCCAGCCGTGCGCAAACTGGGCTTCACCGGGTCACTCCAATCGGGAAACGCATCATGGCATCGTGCGCCGAATCCAACATCAAAAAGTGCTCAATGGAGCTGGGCGGCAAGTCGCCGCTCGTCATCTTCGCCGACTGCGATCTCGAGAAGGCGGTCCGGCTCGGCATGTCGTCGCGCTGTNTTTCAACAAGGGTGAAAACTGTATTGCCGCTGGCCGGCTGTTTGTGGAGGACCGATCCAACGATTGAGTTTGTGCGGACAAGTGATCCGGCGGGAGTAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7433#0 CCGCCGATCGTTAATCCGACCAACGAAAAAGTGATCTGTGACGTGGCGAATGCATCCAAA 60
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 GCGGACGTTGACGATGCAGTTCAAGCCGCCGATGAAGCGTTCCGTGGCGTATGGACGTCC 120
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 GTTTCGGCACGTGAGCGCGGTCAGCTGATGTACCGATTGGCAGAGCTGATGGAGCAGCAC 180
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 CGGGAGGAACTGGCAACGATTGAGTCGATCGATTCGGGTGCAGTTTACACGCTTGCACTG 240
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 AAAACTCACGTCGGTATGTCGATCGATGCGTGGCGCTACTATGCTGGTTGGGCGGATAAG 300
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 ATCGAAGGTAGCACGATTCCGGTCAGCCCAGCCCGCCCGAATCGTGTGCTAACGTTCACG 360
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 AAGAAGGAACCGATCGGTGTGTGCGCTTTAATTACACCCTGGAACTACCCACTGATGATG 420
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 CTCTCGTGGAAGATGGCCGCTTGCATTGCCGCAGGCAACACGGTTGTGATTAAACCAGCC 480
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 CAGGTGTGTCCCTTGACGGCACTAAAGTTTGCCGAGCTTACAGTAAGAGCCGGCTTTCCA 540
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 CCGGGAGTGATCAATGTCGTCACGGGTACGGGCTCGTTGGCCGGCCAAGCCCTTGCAGAC 600
consensus_7433#1 ---------GCCAGAATCGCCAGAGG----GTGTAGTTGGCCGGCCAAGCCCTGTCAGAT 47
** *** ** ** * * ****************** ****
consensus_7433#0 CATCCAGCGGTGCGCAAACTGGGCTTCACCGGATCCACTCCAATCGGGAAACGCATCATG 660
consensus_7433#1 -ATCCAGCCGTGCGCAAACTGGGCTTCACCGGGTC-ACTCCAATCGGGAAACGCATCATG 105
******* *********************** ** ************************
consensus_7433#0 GCTTCGTGCGCCGAATCCAACATCAAAAAGTGCTCCATGGAGCTGGGCGGCAAGTCGCCG 720
consensus_7433#1 GCATCGTGCGCCGAATCCAACATCAAAAAGTGCTCAATGGAGCTGGGCGGCAAGTCGCCG 165
** ******************************** ************************
consensus_7433#0 CTCGTCATCTTCGCCGACTGCGATCTCGAGAAGGCGGTCCGGCTCGGCATGTCGTCGG-- 778
consensus_7433#1 CTCGTCATCTTCGCCGACTGCGATCTCGAGAAGGCGGTCCGGCTCGGCATGTCGTCGCGC 225
*********************************************************
consensus_7433#0 TGTTTTTCAACAAGGGTGAAAACTGTATTGCCGCTGGCCGGCTGTTTGTGGAGGACCGCA 838
consensus_7433#1 TGTNTTTCAACAAGGGTGAAAACTGTATTGCCGCTGGCCGGCTGTTTGTGGAGGACCGAT 285
*** ******************************************************
consensus_7433#0 TCCACGAT-GAGTTTGTGCGGA-AAGTGATCCGCGGCATAAAGACGATGAAACTTGGCGA 896
consensus_7433#1 CCAACGATTGAGTTTGTGCGGACAAGTGATCCG--GCGGGAGTAC--------------- 328
* ***** ************* ********** ** * **
consensus_7433#0 TCCACTCGACCGGGCGACGGCACATGGACCGCAGAACCATCGGGCACATCTAGAGAAGCT 956
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 ACAGGAGTACTGTGCTATCGGCGTGAAGGAGGGAGCGAAGCTACTGTACGGTGGCAAGCG 1016
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 GGTGCCCAAAATGGAGGGACTGTTCTTCGAGCCGACCGTGTTTACCGACGTGGAGGATCA 1076
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 CATGTACATTGCGCGCGAAGAATCGTTCGGTCCGATCATGGTGATATCGAAGTTTCACGC 1136
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 GAGTGATTTCGATGCGCTGGTGGCAAGGGCTAACAGTACCGAGTACGGGCTGGCGAGTGG 1196
consensus_7433#1 ------------------------------------------------------------
consensus_7433#0 TGTTTTCAC 1205
consensus_7433#1 ---------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||