cluster # 7479

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Anopheles gambiae
cluster # 7479 cluster # 7479 Sequences # 7 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7479#0 length = 829 sequences # 1
consensus_7479#1 length = 685 sequences # 1
consensus_7479#2 length = 685 sequences # 1

consensus_7479#3 length = 664 sequences # 1
consensus_7479#4 length = 640 sequences # 2
consensus_7479#5 length = 597 sequences # 1

consensusID : consensus_7479#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 829
fasta sequence

                              [GGCAGAATTCGGCACGTAGGCGCTATAGCTTATGCTAGCGTACGGTAGAGGGCGCCACCTGTGCAATGCTCTGCAGTGTGGTGAATATGGTGAATTTGCAATTACCGCCGGTTTGGTCCTTACCAAATGCTCTTCAAATTCAAATGCAACGAGCCGAGCCGCGTTTCAACATGTACGGACAGGAGAGGACAAACCGGGAACACACTTCCCCCCTTCCCACACACGTCAACAAGCACGTCGTTAAACCTTACCCAAGCAATAGCGAGTTGTTTTATATTTTTCTTCTCTTTTTTAATTTTGCAAACAAAAACAATCGGTATTTTTACGCCCGTATTATTGCATCTTATTGGTTAACTATTGTGTTTTNTTTCTTGCTTTGTAACATTCTCTACATTTACCATTTTGAATCCCATTCGGCCCATGGAAAGCTGCGGTTACGAATGCCGAAGGCGATCGCGCCCGCGCGCACAGAAATGTCTCACGTTACAATGCGTTTACGAGCAGCAGCAGGAGCAGCAGCAGCAGCAGGCGAGCAAACTGATGCANCCCAAAAACGGCATCCTAAATACATGTACGGTTTGGTACTAATTCTGAAGGGGTNAGGTATTTAAAGGTTGTNAGTTCANAGTTAGGTCCCTTCCGCTTNCGGGTTNTCCGGGGTGTNGTGCGTACACCGTTNGTAGTAATAGCGCGCCTTTGTTGTTGGCGCAAAAGGGANNCGCGCCTTTGGTGGTTTCCGGGCACGGGNAAACTTCTGGGGCCCGCGCCGGATTGCCNTTACTCTTGGCAGCAATTGGCGACGGAAAAACAGGGGAATATCCCAGAGATC]

[+] EMBL BX467733             [GGCAGAATTCGGCACGTAGGCGCTATAGCTTATGCTAGCGTACGGTAGAGGGCGCCACCTGTGCAATGCTCTGCAGTGTGGTGAATATGGTGAATTTGCAATTACCGCCGGTTTGGTCCTTACCAAATGCTCTTCAAATTCAAATGCAACGAGCCGAGCCGCGTTTCAACATGTACGGACAGGAGAGGACAAACCGGGAACACACTTCCCCCCTTCCCACACACGTCAACAAGCACGTCGTTAAACCTTACCCAAGCAATAGCGAGTTGTTTTATATTTTTCTTCTCTTTTTTAATTTTGCAAACAAAAACAATCGGTATTTTTACGCCCGTATTATTGCATCTTATTGGTTAACTATTGTGTTTTNTTTCTTGCTTTGTAACATTCTCTACATTTACCATTTTGAATCCCATTCGGCCCATGGAAAGCTGCGGTTACGAATGCCGAAGGCGATCGCGCCCGCGCGCACAGAAATGTCTCACGTTACAATGCGTTTACGAGCAGCAGCAGGAGCAGCAGCAGCAGCAGGCGAGCAAACTGATGCANCCCAAAAACGGCATCCTAAATACATGTACGGTTTGGTACTAATTCTGAAGGGGTNAGGTATTTAAAGGTTGTNAGTTCANAGTTAGGTCCCTTCCGCTTNCGGGTTNTCCGGGGTGTNGTGCGTACACCGTTNGTAGTAATAGCGCGCCTTTGTTGTTGGCGCAAAAGGGANNCGCGCCTTTGGTGGTTTCCGGGCACGGGNAAACTTCTGGGGCCCGCGCCGGATTGCCNTTACTCTTGGCAGCAATTGGCGACGGAAAAACAGGGGAATATCCCAGAGATC]




>consensus_7479#0
GGCAGAATTCGGCACGTAGGCGCTATAGCTTATGCTAGCGTACGGTAGAGGGCGCCACCT
GTGCAATGCTCTGCAGTGTGGTGAATATGGTGAATTTGCAATTACCGCCGGTTTGGTCCT
TACCAAATGCTCTTCAAATTCAAATGCAACGAGCCGAGCCGCGTTTCAACATGTACGGAC
AGGAGAGGACAAACCGGGAACACACTTCCCCCCTTCCCACACACGTCAACAAGCACGTCG
TTAAACCTTACCCAAGCAATAGCGAGTTGTTTTATATTTTTCTTCTCTTTTTTAATTTTG
CAAACAAAAACAATCGGTATTTTTACGCCCGTATTATTGCATCTTATTGGTTAACTATTG
TGTTTTNTTTCTTGCTTTGTAACATTCTCTACATTTACCATTTTGAATCCCATTCGGCCC
ATGGAAAGCTGCGGTTACGAATGCCGAAGGCGATCGCGCCCGCGCGCACAGAAATGTCTC
ACGTTACAATGCGTTTACGAGCAGCAGCAGGAGCAGCAGCAGCAGCAGGCGAGCAAACTG
ATGCANCCCAAAAACGGCATCCTAAATACATGTACGGTTTGGTACTAATTCTGAAGGGGT
NAGGTATTTAAAGGTTGTNAGTTCANAGTTAGGTCCCTTCCGCTTNCGGGTTNTCCGGGG
TGTNGTGCGTACACCGTTNGTAGTAATAGCGCGCCTTTGTTGTTGGCGCAAAAGGGANNC
GCGCCTTTGGTGGTTTCCGGGCACGGGNAAACTTCTGGGGCCCGCGCCGGATTGCCNTTA
CTCTTGGCAGCAATTGGCGACGGAAAAACAGGGGAATATCCCAGAGATC

consensusID : consensus_7479#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 685
fasta sequence

                              [CCGCTTTCCCAAGCAATAGCGAGTTGTTTTTTTTCTTCTCTTTTTTAATTTTGCAAACAAAAACAATCGGTATTTTTACGCCCGGATTATTGCATCTTATTGGTTAACTATTGTGTTTTTTTTTTCTTGCTTTGTAACATCTCTACATTTACCATTTTGAATCCCATTCGCCCATGGAAAGCTGCGGTTACGAATGCCGAAGGCGATCGCGCCGGCGCGCACAGAAATGTCTCACGTTAAATGCGTTTACGAGCAGCAGCAGCAGCACAAACTGATGCACCCCAAAAACGCATCCTAAATACATGTACGTTGTATTTTTTAGGTTAGTATTTAAGTTTTATTCATTAGTCCTTCGCTTCGGTTTCGGGTGTGTGCGTACACGTGTAGTATACCCCTTTGTGTGGCGAAGGACGCGCGTGTGTTCGGAAGGAAAGGGGCCGCCGCTGCCTTCCTCTGCACAATGCAGAAAAGGGATCCCAAATCAAAGAAAACAAAGTGAAGCAAAGAAGGGCACAGAGAGAGAGAGAGAAAGAGAGCGAGAGAGAAAGAGATAAAGAATGTGGGTGGGAGAAAATGGCCACGGCTTAGGAACATCGATTGGCATATAGACTATTACTATAATTATTATTATTATACCTAAAAAAACAAGCAAGCAAATTTGTAAGCTGTAGGAAACGTGGATGGT]

[+] EMBL BM610038             [CCGCTTTCCCAAGCAATAGCGAGTTGTTTTTTTTCTTCTCTTTTTTAATTTTGCAAACAAAAACAATCGGTATTTTTACGCCCGGATTATTGCATCTTATTGGTTAACTATTGTGTTTTTTTTTTCTTGCTTTGTAACATCTCTACATTTACCATTTTGAATCCCATTCGCCCATGGAAAGCTGCGGTTACGAATGCCGAAGGCGATCGCGCCGGCGCGCACAGAAATGTCTCACGTTAAATGCGTTTACGAGCAGCAGCAGCAGCACAAACTGATGCACCCCAAAAACGCATCCTAAATACATGTACGTTGTATTTTTTAGGTTAGTATTTAAGTTTTATTCATTAGTCCTTCGCTTCGGTTTCGGGTGTGTGCGTACACGTGTAGTATACCCCTTTGTGTGGCGAAGGACGCGCGTGTGTTCGGAAGGAAAGGGGCCGCCGCTGCCTTCCTCTGCACAATGCAGAAAAGGGATCCCAAATCAAAGAAAACAAAGTGAAGCAAAGAAGGGCACAGAGAGAGAGAGAGAAAGAGAGCGAGAGAGAAAGAGATAAAGAATGTGGGTGGGAGAAAATGGCCACGGCTTAGGAACATCGATTGGCATATAGACTATTACTATAATTATTATTATTATACCTAAAAAAACAAGCAAGCAAATTTGTAAGCTGTAGGAAACGTGGATGGT]




>consensus_7479#1
CCGCTTTCCCAAGCAATAGCGAGTTGTTTTTTTTCTTCTCTTTTTTAATTTTGCAAACAA
AAACAATCGGTATTTTTACGCCCGGATTATTGCATCTTATTGGTTAACTATTGTGTTTTT
TTTTTCTTGCTTTGTAACATCTCTACATTTACCATTTTGAATCCCATTCGCCCATGGAAA
GCTGCGGTTACGAATGCCGAAGGCGATCGCGCCGGCGCGCACAGAAATGTCTCACGTTAA
ATGCGTTTACGAGCAGCAGCAGCAGCACAAACTGATGCACCCCAAAAACGCATCCTAAAT
ACATGTACGTTGTATTTTTTAGGTTAGTATTTAAGTTTTATTCATTAGTCCTTCGCTTCG
GTTTCGGGTGTGTGCGTACACGTGTAGTATACCCCTTTGTGTGGCGAAGGACGCGCGTGT
GTTCGGAAGGAAAGGGGCCGCCGCTGCCTTCCTCTGCACAATGCAGAAAAGGGATCCCAA
ATCAAAGAAAACAAAGTGAAGCAAAGAAGGGCACAGAGAGAGAGAGAGAAAGAGAGCGAG
AGAGAAAGAGATAAAGAATGTGGGTGGGAGAAAATGGCCACGGCTTAGGAACATCGATTG
GCATATAGACTATTACTATAATTATTATTATTATACCTAAAAAAACAAGCAAGCAAATTT
GTAAGCTGTAGGAAACGTGGATGGT

consensusID : consensus_7479#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 685
fasta sequence

                              [AGGATTTAAGAGTGGAGAGAATCCCCTAGACAGGGCGAACATGAATGAAATGGAGGAAAATTATCGAAAAAGCAAGCACACTATCACAAACATCTAATAACCATATGCCGGTTTTTAAGTCAAGCCGAGGTCCACATCCATCAGCAGCAGTTAATGCGAGCTTATCCGCACACCCTTGTGGATGCAGCATATTGACGGATGTTGTTGATTATGATGATAATGGACGTTTTACATCAAACACAGTGCAAGCAATGCACAATTCCGTACAATGAAAACTCACTGGCAAAAACACACGCACCCAACATAGGAAGTAGTAGGGGCGGGAATGGCGGGATCATCATTCTTCGGCGACTATAACAAAAGGCAAAGTAGAGCTAGAGAGAAGCTAGAGTGTAGCGAAAGACCAGAACACATAGGAGCTAGGAGCACTGAACACTGAAGAATGGAATGCCCTTTTTAATACGAATATAGTACATCACCAACCAAAAACCAATCCCCTTTCCCTTCTTCCCACCACCAATCCTCTTGCTCACCATCATCTTGCACTAGCCAAATTCCAAATACGATCCAGAGGGAGGATGGCATCCGGCACACTCTGGTTTGGAGCGGTGTTGACCGTTGCAGATTTCTGTTTGGTATGTGCAGATCGTCTAAATTCATGAATAAAGTCTCATACGTGTATATC]

[+] EMBL BX624833             [AGGATTTAAGAGTGGAGAGAATCCCCTAGACAGGGCGAACATGAATGAAATGGAGGAAAATTATCGAAAAAGCAAGCACACTATCACAAACATCTAATAACCATATGCCGGTTTTTAAGTCAAGCCGAGGTCCACATCCATCAGCAGCAGTTAATGCGAGCTTATCCGCACACCCTTGTGGATGCAGCATATTGACGGATGTTGTTGATTATGATGATAATGGACGTTTTACATCAAACACAGTGCAAGCAATGCACAATTCCGTACAATGAAAACTCACTGGCAAAAACACACGCACCCAACATAGGAAGTAGTAGGGGCGGGAATGGCGGGATCATCATTCTTCGGCGACTATAACAAAAGGCAAAGTAGAGCTAGAGAGAAGCTAGAGTGTAGCGAAAGACCAGAACACATAGGAGCTAGGAGCACTGAACACTGAAGAATGGAATGCCCTTTTTAATACGAATATAGTACATCACCAACCAAAAACCAATCCCCTTTCCCTTCTTCCCACCACCAATCCTCTTGCTCACCATCATCTTGCACTAGCCAAATTCCAAATACGATCCAGAGGGAGGATGGCATCCGGCACACTCTGGTTTGGAGCGGTGTTGACCGTTGCAGATTTCTGTTTGGTATGTGCAGATCGTCTAAATTCATGAATAAAGTCTCATACGTGTATATC]




>consensus_7479#2
AGGATTTAAGAGTGGAGAGAATCCCCTAGACAGGGCGAACATGAATGAAATGGAGGAAAA
TTATCGAAAAAGCAAGCACACTATCACAAACATCTAATAACCATATGCCGGTTTTTAAGT
CAAGCCGAGGTCCACATCCATCAGCAGCAGTTAATGCGAGCTTATCCGCACACCCTTGTG
GATGCAGCATATTGACGGATGTTGTTGATTATGATGATAATGGACGTTTTACATCAAACA
CAGTGCAAGCAATGCACAATTCCGTACAATGAAAACTCACTGGCAAAAACACACGCACCC
AACATAGGAAGTAGTAGGGGCGGGAATGGCGGGATCATCATTCTTCGGCGACTATAACAA
AAGGCAAAGTAGAGCTAGAGAGAAGCTAGAGTGTAGCGAAAGACCAGAACACATAGGAGC
TAGGAGCACTGAACACTGAAGAATGGAATGCCCTTTTTAATACGAATATAGTACATCACC
AACCAAAAACCAATCCCCTTTCCCTTCTTCCCACCACCAATCCTCTTGCTCACCATCATC
TTGCACTAGCCAAATTCCAAATACGATCCAGAGGGAGGATGGCATCCGGCACACTCTGGT
TTGGAGCGGTGTTGACCGTTGCAGATTTCTGTTTGGTATGTGCAGATCGTCTAAATTCAT
GAATAAAGTCTCATACGTGTATATC

consensusID : consensus_7479#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 664
fasta sequence

                              [CCGCCCACGCGTCCGATTTTGAATCCCATTCGCCCATGGAAAGCTGCGGTTACGAATGCCGAAGGCGATCGCGCCGGCGCGCACAGAAATGTCTCACGTTAAATGCGTTTACGAGCAGCAGCAGCAGCACAAACTGATGCACCCCAAAAACGCATCCTAAATACATGTACGTTGTATTTTTTAGGTTAGTATTTAAGTTTTATTCATTAGTCCTTCGCTTCGGTTTCGGGTGTGTGCGTACACGTGTAGTATACCCCTTTGTGTGGCGAAGGACGCGCGTGTGTTCGGAAGGAAGGGGCCGCCGCTGCCTTCCTCTGCACAATGCAGAAAAGGGATCCCAAATCAAAGAAAACAAAGTGAAGCAAAGAAGGGCACAGAGAGAGAGAGAGAAAGAGAGCGAGAGAGAAAGAGATAAAGAATGTGGGTGGGAGAAAATGGCCACGGCTTAGGAACATCGATTGGCATATAGACTATTACTATAATTATTATTATTATACCTAAAAAAACAAGCAAGCAAATTTGTAAGCTGTAGGAAACGTGGATGGTGTGCAGTAGCGTTCGATGTGTTGAATGTTGAAAGGCAACTAAAACGGAATATATTTATGGATAGAAAACACTAAAACAAAACAAAACAAAAAAAGGAATGGTAATAACAACAATTAGG]

[+] EMBL BM642627             [CCGCCCACGCGTCCGATTTTGAATCCCATTCGCCCATGGAAAGCTGCGGTTACGAATGCCGAAGGCGATCGCGCCGGCGCGCACAGAAATGTCTCACGTTAAATGCGTTTACGAGCAGCAGCAGCAGCACAAACTGATGCACCCCAAAAACGCATCCTAAATACATGTACGTTGTATTTTTTAGGTTAGTATTTAAGTTTTATTCATTAGTCCTTCGCTTCGGTTTCGGGTGTGTGCGTACACGTGTAGTATACCCCTTTGTGTGGCGAAGGACGCGCGTGTGTTCGGAAGGAAGGGGCCGCCGCTGCCTTCCTCTGCACAATGCAGAAAAGGGATCCCAAATCAAAGAAAACAAAGTGAAGCAAAGAAGGGCACAGAGAGAGAGAGAGAAAGAGAGCGAGAGAGAAAGAGATAAAGAATGTGGGTGGGAGAAAATGGCCACGGCTTAGGAACATCGATTGGCATATAGACTATTACTATAATTATTATTATTATACCTAAAAAAACAAGCAAGCAAATTTGTAAGCTGTAGGAAACGTGGATGGTGTGCAGTAGCGTTCGATGTGTTGAATGTTGAAAGGCAACTAAAACGGAATATATTTATGGATAGAAAACACTAAAACAAAACAAAACAAAAAAAGGAATGGTAATAACAACAATTAGG]




>consensus_7479#3
CCGCCCACGCGTCCGATTTTGAATCCCATTCGCCCATGGAAAGCTGCGGTTACGAATGCC
GAAGGCGATCGCGCCGGCGCGCACAGAAATGTCTCACGTTAAATGCGTTTACGAGCAGCA
GCAGCAGCACAAACTGATGCACCCCAAAAACGCATCCTAAATACATGTACGTTGTATTTT
TTAGGTTAGTATTTAAGTTTTATTCATTAGTCCTTCGCTTCGGTTTCGGGTGTGTGCGTA
CACGTGTAGTATACCCCTTTGTGTGGCGAAGGACGCGCGTGTGTTCGGAAGGAAGGGGCC
GCCGCTGCCTTCCTCTGCACAATGCAGAAAAGGGATCCCAAATCAAAGAAAACAAAGTGA
AGCAAAGAAGGGCACAGAGAGAGAGAGAGAAAGAGAGCGAGAGAGAAAGAGATAAAGAAT
GTGGGTGGGAGAAAATGGCCACGGCTTAGGAACATCGATTGGCATATAGACTATTACTAT
AATTATTATTATTATACCTAAAAAAACAAGCAAGCAAATTTGTAAGCTGTAGGAAACGTG
GATGGTGTGCAGTAGCGTTCGATGTGTTGAATGTTGAAAGGCAACTAAAACGGAATATAT
TTATGGATAGAAAACACTAAAACAAAACAAAACAAAAAAAGGAATGGTAATAACAACAAT
TAGG

consensusID : consensus_7479#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 640
fasta sequence

                              [CCGGGTGAATTTGCAATTACCGCATTTGGTCCTTACCAAATGCTCTTCAAATTCAAATGCAACGAGCCGAGCCGCGTTTCAACATGTACGGACAGGAGAGGACAAACCGCAACACACTTCCCCCCTTCCCACACACGTCAACAAGCACGTCGTTAAAACCTTACCCAAGCAATAGCGAGTTGTTTTTTTTTTTCTTCTCTTTTTTAATTTTGCAAACAAAAACAATCGGTATTTTTACGCCCGTATTATTGCATCTTATTGGTTAACTATTGTGTTTTTTTTCTTGCTTTGTAACATTCTCTACATTTACCATTTTGAATCCCATTCGCCCATGGAAAGCTGCGGTTACGAATGCCGAAGGCGATCGCGCCCGCGCGCACAGAAATGTCTCACGTTAAAT-GCGTTTACGAGCAGCAGCA-GGAGCAGCAGCAGCAGCAGCACAAACTGATGCACCCCAAAAACGCATCCTAAATACATGTACGTTGTATTTTTTAGGTTAGTATTTAAGTTTTATTCATTAGTCCTTCGCTTCGGTTTCGGGTGTGTGCGTACACGTGTAGTATACCCC-TTGTGTGGCGAAGGACGCGCTTGTGTTCGGAAGGAAATTGGGCCGCCGCTGCCTTCCTCTGCACAATGCAGA]

[+] EMBL BM587541             [CCGGGTGAATTTGCAATTACCGCATTTGGTCCTTACCAAATGCTCTTCAAATTCAAATGCAACGAGCCGAGCCGCGTTTCAACATGTACGGACAGGAGAGGACAAACCGCAACACACTTCCCCCCTTCCCACACACGTCAACAAGCACGTCGTTAAAACCTTACCCAAGCAATAGCGAGTTGTTTTTTTTTTTCTTCTCTTTTTTAATTTTGCAAACAAAAACAATCGGTATTTTTACGCCCGTATTATTGCATCTTATTGGTTAACTATTGTGTTTTTTTTCTTGCTTTGTAACATTCTCTACATTTACCATTTTGAATCCCATTCGCCCATGGAAAGCTGCGGTTACGAATGCCGAAGGCGATCGCGCCCGCGCGCACAGAAATGTCTCACGTTAAAT GCGTTTACGAGCAGCAGCA GGAGCAGCAGCAGCAGCAGCACAAACTGATGCACCCCAAAAACGCATCCTAAATACATGTACGTTGTATTTTTTAGGTTAGTATTTAAGTTTTATTCATTAGTCCTTCGCTTCGGTTTCGGGTGTGTGCGTACACGTGTAGTATACCCC TTGTGTGGCGAAGGACGCGCTTGTGTTCGGAAGGAAATTGGGCCGCCGCTGCCTTCCTCTGCACAATGCA  ]
[-] EMBL CNS09NTQ             [                                                                                                                                                                                                                                                                                                                                                                                            AGGAATGTCTCACGTTAAATGGCGTTTACGAGCAGCAGCAGGGAGCAG  GCAGCAGCAGCACAAACTGATGCACCCCAAAAACGCATCCTAAATACATGTACGTTGTATTTTTTAGGTTAGTATTTAAGTTTTATTCATTAGTCCTTCGCTTCGGTTTCGGGTGTGTGCGTACACGTGTAGTATACCCCTTTGTGTGGCGAAGGACGCGCGTGTGTTCGGAAGGAAA GGGGCCGCCGCTGCCTTCCGCTGCACAATGCAGA]




>consensus_7479#4
CCGGGTGAATTTGCAATTACCGCATTTGGTCCTTACCAAATGCTCTTCAAATTCAAATGC
AACGAGCCGAGCCGCGTTTCAACATGTACGGACAGGAGAGGACAAACCGCAACACACTTC
CCCCCTTCCCACACACGTCAACAAGCACGTCGTTAAAACCTTACCCAAGCAATAGCGAGT
TGTTTTTTTTTTTCTTCTCTTTTTTAATTTTGCAAACAAAAACAATCGGTATTTTTACGC
CCGTATTATTGCATCTTATTGGTTAACTATTGTGTTTTTTTTCTTGCTTTGTAACATTCT
CTACATTTACCATTTTGAATCCCATTCGCCCATGGAAAGCTGCGGTTACGAATGCCGAAG
GCGATCGCGCCCGCGCGCACAGAAATGTCTCACGTTAAATGCGTTTACGAGCAGCAGCAG
GAGCAGCAGCAGCAGCAGCACAAACTGATGCACCCCAAAAACGCATCCTAAATACATGTA
CGTTGTATTTTTTAGGTTAGTATTTAAGTTTTATTCATTAGTCCTTCGCTTCGGTTTCGG
GTGTGTGCGTACACGTGTAGTATACCCCTTGTGTGGCGAAGGACGCGCTTGTGTTCGGAA
GGAAATTGGGCCGCCGCTGCCTTCCTCTGCACAATGCAGA

consensusID : consensus_7479#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 597
fasta sequence

                              [CAGATCCCCGTTAATNGGAAAAGTGGATGGTGCCAGTACGTCGATGTGTTGAATGTTGAAAGGCAACTAAAACGGAATATATCTATGGATAGAAAACACTAAAACAAAACAAAACAAAAAAAGGAATGGAAATAACAACAATTAGACACAGAATGATGATGTGCAGGATCTCCGGAATGACGCGGGAAGGATTTAAGAGTGGGAGAATCCCCTAACAGGCGAACATGAATGAAATGGCGGAAAATATCGAAAGCAAGCACACTATCACAAAATCTAATAACATATGCCGGTTTTAAGTCAAGCCGAGGTCCACATCCATCAGACAGCAGGTTAATGCGAGCTNTAATCCGCACACCCTTGTGGATAGCAGCATATTGACGAGATGTTGCTTGAATAATAGATGATAATGGAACGTTTTACATCAAAACACAGTGCAAAGCAAATGCACAATTCCCCGTACAAATGACAANACTCCCTGGACAAAAACACACGGCACCCCCAACAATAGCGAACGTTATAAGCGGACGGGAAACTGGCGGGATCATCCAACTTCACGGCGNCTATAANCAAACGGGGACAAGCTACAANCTAGCAGCA]

[+] EMBL AL692275             [CAGATCCCCGTTAATNGGAAAAGTGGATGGTGCCAGTACGTCGATGTGTTGAATGTTGAAAGGCAACTAAAACGGAATATATCTATGGATAGAAAACACTAAAACAAAACAAAACAAAAAAAGGAATGGAAATAACAACAATTAGACACAGAATGATGATGTGCAGGATCTCCGGAATGACGCGGGAAGGATTTAAGAGTGGGAGAATCCCCTAACAGGCGAACATGAATGAAATGGCGGAAAATATCGAAAGCAAGCACACTATCACAAAATCTAATAACATATGCCGGTTTTAAGTCAAGCCGAGGTCCACATCCATCAGACAGCAGGTTAATGCGAGCTNTAATCCGCACACCCTTGTGGATAGCAGCATATTGACGAGATGTTGCTTGAATAATAGATGATAATGGAACGTTTTACATCAAAACACAGTGCAAAGCAAATGCACAATTCCCCGTACAAATGACAANACTCCCTGGACAAAAACACACGGCACCCCCAACAATAGCGAACGTTATAAGCGGACGGGAAACTGGCGGGATCATCCAACTTCACGGCGNCTATAANCAAACGGGGACAAGCTACAANCTAGCAGCA]




>consensus_7479#5
CAGATCCCCGTTAATNGGAAAAGTGGATGGTGCCAGTACGTCGATGTGTTGAATGTTGAA
AGGCAACTAAAACGGAATATATCTATGGATAGAAAACACTAAAACAAAACAAAACAAAAA
AAGGAATGGAAATAACAACAATTAGACACAGAATGATGATGTGCAGGATCTCCGGAATGA
CGCGGGAAGGATTTAAGAGTGGGAGAATCCCCTAACAGGCGAACATGAATGAAATGGCGG
AAAATATCGAAAGCAAGCACACTATCACAAAATCTAATAACATATGCCGGTTTTAAGTCA
AGCCGAGGTCCACATCCATCAGACAGCAGGTTAATGCGAGCTNTAATCCGCACACCCTTG
TGGATAGCAGCATATTGACGAGATGTTGCTTGAATAATAGATGATAATGGAACGTTTTAC
ATCAAAACACAGTGCAAAGCAAATGCACAATTCCCCGTACAAATGACAANACTCCCTGGA
CAAAAACACACGGCACCCCCAACAATAGCGAACGTTATAAGCGGACGGGAAACTGGCGGG
ATCATCCAACTTCACGGCGNCTATAANCAAACGGGGACAAGCTACAANCTAGCAGCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7479#0      GGCAGAATTCGGCACGTAGGCGCTATAGCTTATGCTAGCGTACGGTAGAGGGCGCCACCT 60
consensus_7479#4      ------------------------------------------------------------
consensus_7479#1      ------------------------------------------------------------
consensus_7479#3      ------------------------------------------------------------
consensus_7479#2      ------------------------------------------------------------
consensus_7479#5      ------------------------------------------------------------
                                                                                  

consensus_7479#0      GTGCAATGCTCTGCAGTGTGGTGAATATGGTGAATTTGCAATTACCGCCGGTTTGGTCCT 120
consensus_7479#4      -------------------------CCGGGTGAATTTGCAATTACCGC--ATTTGGTCCT 33
consensus_7479#1      ------------------------------------------------------------
consensus_7479#3      ------------------------------------------------------------
consensus_7479#2      ------------------------------------------------------------
consensus_7479#5      ------------------------------------------------------------
                                                                                  

consensus_7479#0      TACCAAATGCTCTTCAAATTCAAATGCAACGAGCCGAGCCGCGTTTCAACATGTACGGAC 180
consensus_7479#4      TACCAAATGCTCTTCAAATTCAAATGCAACGAGCCGAGCCGCGTTTCAACATGTACGGAC 93
consensus_7479#1      ------------------------------------------------------------
consensus_7479#3      ------------------------------------------------------------
consensus_7479#2      ------------------------------------------------------------
consensus_7479#5      ------------------------------------------------------------
                                                                                  

consensus_7479#0      AGGAGAGGACAAACCGGGAACACACTTCCCCCCTTCCCACACACGTCAACAAGCACGTCG 240
consensus_7479#4      AGGAGAGGACAAACCGC-AACACACTTCCCCCCTTCCCACACACGTCAACAAGCACGTCG 152
consensus_7479#1      ------------------------------------------------------------
consensus_7479#3      ------------------------------------------------------------
consensus_7479#2      --------------------------------------------AGGATTTAAG--AGTG 14
consensus_7479#5      --------------------------------------------CAGATCCCCGTTAATN 16
                                                                                  

consensus_7479#0      TTAAA-CCTTACCCAAGCAATAGCGAGTTGTTTTATATTTTTCTTCTCTTTTTTAATTTT 299
consensus_7479#4      TTAAAACCTTACCCAAGCAATAGCGAGTTGTTTT-TTTTTTTCTTCTCTTTTTTAATTTT 211
consensus_7479#1      ----CCGCTTTCCCAAGCAATAGCGAGTTGTTTT----TTTTCTTCTCTTTTTTAATTTT 52
consensus_7479#3      ------------------------------------------------------------
consensus_7479#2      GAGAGAATCCCCTA-GACAGGGCGAACATGAATGAAATGGAGGAAAATTATCGAAAAAGC 73
consensus_7479#5      GGAAAAGTGGATGGTGCCAGTACGTCGATGTGTTGAATGTTGAAAGGCAACTAAAACGGA 76
                                                                                  

consensus_7479#0      GCAAACAAAAACAATCGGTATTTTTACGCCCGTATTATTGCATCTTATTGGTTAACTATT 359
consensus_7479#4      GCAAACAAAAACAATCGGTATTTTTACGCCCGTATTATTGCATCTTATTGGTTAACTATT 271
consensus_7479#1      GCAAACAAAAACAATCGGTATTTTTACGCCCGGATTATTGCATCTTATTGGTTAACTATT 112
consensus_7479#3      ------------------------------------------------------------
consensus_7479#2      AAGCACACTATCACAAACATCTAATAACCATATGCCGGTTTTTAAGTCAAGCCGAGGTCC 133
consensus_7479#5      ATATAT-CTATGGATAGAAAACACTAAA-ACAAAACAAAACAAAAAAAGGAATGGAAATA 134
                                                                                  

consensus_7479#0      GTGTTTTNTTT--CTTGCTTTGTAACATTCTCTACATTTACCATTTTGAATCCCATTCGG 417
consensus_7479#4      GTGTTTTTTTT--CTTGCTTTGTAACATTCTCTACATTTACCATTTTGAATCCCATTCG- 328
consensus_7479#1      GTGTTTTTTTTTTCTTGCTTTGTAACAT-CTCTACATTTACCATTTTGAATCCCATTCG- 170
consensus_7479#3      --------------------------CC-GCCCACGCGTCCGATTTTGAATCCCATTCG- 32
consensus_7479#2      ACATCCATCAGC-AGCAGTTAATGCGAGCTTATCCGCACACCCTTGTGGATGCAGCATA- 191
consensus_7479#5      ACAACAATTAGA-CACAG--AATG----ATGATGTGCAGGATCTCCGGAATGACGCG--- 184
                                                                 *   * **         

consensus_7479#0      CCCATGGAAAGCTGCGGTTACGAATGCCGAAGGCGATCGCGCC-CGCGCGCACAGAAATG 476
consensus_7479#4      CCCATGGAAAGCTGCGGTTACGAATGCCGAAGGCGATCGCGCC-CGCGCGCACAGAAATG 387
consensus_7479#1      CCCATGGAAAGCTGCGGTTACGAATGCCGAAGGCGATCGCGCC-GGCGCGCACAGAAATG 229
consensus_7479#3      CCCATGGAAAGCTGCGGTTACGAATGCCGAAGGCGATCGCGCC-GGCGCGCACAGAAATG 91
consensus_7479#2      ----TTGACGGATGTTGTTGATTATGATGATAATGGACGTTTTACAT-CAAACACAGTGC 246
consensus_7479#5      -----GGAAGGAT----TTAAGAGTGG-GAGAAT---CCCCTAACAGGCGAACATGAATG 231
                            **  * *    **     **  **       *          *  ***      

consensus_7479#0      TCTCACGTTACAATGCGTTTACGAGCAGCAGCAGGAGCAGCAGCAGCAGCAGGCGAGCAA 536
consensus_7479#4      TCTCACGTTA-AATGCGTTTACGAGCAGCAGCAGGAGCAGCAGCAGCAGCA---GCACAA 443
consensus_7479#1      TCTCACGTTA-AATGCGTTTACGAGCAGCAGCAGCAGCA------------------CAA 270
consensus_7479#3      TCTCACGTTA-AATGCGTTTACGAGCAGCAGCAGCAGCA------------------CAA 132
consensus_7479#2      AAGCAATGCACAATTCCGTACAATGAAAACTCACTGGCA------------------AAA 288
consensus_7479#5      AAATGGCGGAAAATATCG---AAAGCAAGCACACTATCA------------------CAA 270
                               * ***          * *    **    **                   **

consensus_7479#0      ACTGATGCANCCCAAAAACGGCATCCTAAATACATGTACGGTTTGGTACTAATTCTGAAG 596
consensus_7479#4      ACTGATGCACCCCAAAAACG-CATCCTAAATACATGTACGTT---GTATTTTTT------ 493
consensus_7479#1      ACTGATGCACCCCAAAAACG-CATCCTAAATACATGTACGTT---GTATTTTTT------ 320
consensus_7479#3      ACTGATGCACCCCAAAAACG-CATCCTAAATACATGTACGTT---GTATTTTTT------ 182
consensus_7479#2      ACACACGCACCCAACATAGGAAGTAGTAGGGGCGGGAATGGCGGGATCATCATTCTTCGG 348
consensus_7479#5      AATCTAA----TAACATATGCCGGTTTTAAGTCAAGC----CGAGGTCCACATCCATCAG 322
                      *            * * * *      *     *  *          *     *       

consensus_7479#0      -----GGGTNAGGTATTTAAAGGTTGTNAGTTCANAGTTAGGTCCCTTCCGCTT-NCGGG 650
consensus_7479#4      -----AGGTTAG-TATTTAAGTTTTATTCATTAGTCCTT----CGCTTCGGTTT-CGGGT 542
consensus_7479#1      -----AGGTTAG-TATTTAAGTTTTATTCATTAGTCCTT----CGCTTCGGTTT-CGGGT 369
consensus_7479#3      -----AGGTTAG-TATTTAAGTTTTATTCATTAGTCCTT----CGCTTCGGTTT-CGGGT 231
consensus_7479#2      CGACTATAACAAAAGGCAAAGTAGAGCTAGAGAGAAGCTAGAGTGTAGCGAAAGACCAGA 408
consensus_7479#5      --------ACAGCAGGTTAATGCGAGCTNTAATCCG--CACACCCTTGTGGATAGC---A 369
                                *       **                                        

consensus_7479#0      TTNTCCGGG-GTGTNGTGCGTACACCGTT-NGTAGTAATAGCGCGCCTTTGTTGTTGGCG 708
consensus_7479#4      GTGTGCGTACACGTGTAGTATACCCCTTG-TGTGGCGA-AGGACGCGCTTGT-----GTT 595
consensus_7479#1      GTGTGCGTACACGTGTAGTATACCCCTTTGTGTGGCGA-AGGACGCGCGTGT-----GTT 423
consensus_7479#3      GTGTGCGTACACGTGTAGTATACCCCTTTGTGTGGCGA-AGGACGCGCGTGT-----GTT 285
consensus_7479#2      ACACATAGGAGCTAGGAGCACTGAACACTGAAGAATGGAATGCCCTTTTTAATACGAATA 468
consensus_7479#5      GCATATTGACGAGATGTTGCTTGAATAATAGATGATAATGGAACGTTTTACATCAAAACA 429
                                                                 *                

consensus_7479#0      CAAAAGGGANNCGCGCCTTTGGTGGTTTCCGG-GCACGG-GNAAACTTCTGGGGCCCGCG 766
consensus_7479#4      CGGAAGGAAATTGGGCCGCCGCTGCCTTCCTCTGCACAATGCAGA--------------- 640
consensus_7479#1      CGGAAGGAAAG-GGGCCGCCGCTGCCTTCCTCTGCACAATGCAGAAAAG-GGATCCCAAA 481
consensus_7479#3      CGGAAGGAA-G-GGGCCGCCGCTGCCTTCCTCTGCACAATGCAGAAAAG-GGATCCCAAA 342
consensus_7479#2      TAGTACATCACCAACCAAAAACCAATCCCCTTTCCCTTCTTCCCACCACCAATCCTCTTG 528
consensus_7479#5      CAGTGCA-----------AAGCAAATGCACAATTCCCCGTACAAATGACAANACTCCCTG 478
                                                   *    *         *               

consensus_7479#0      CCGGATTGCCNTTACTCTTGGCAGCAATTGGCGACGGAAAAACAGGGGAATATCCCAG-- 824
consensus_7479#4      ------------------------------------------------------------
consensus_7479#1      TCAAAGAAAACAAAGTGAAGCAAAGAAGGGCACAGAGAGAGAGAGAGAAAGAGAGCGA-- 539
consensus_7479#3      TCAAAGAAAACAAAGTGAAGCAAAGAAGGGCACAGAGAGAGAGAGAGAAAGAGAGCGA-- 400
consensus_7479#2      CTCACCATCATCTTGCACTAGCCA-AATTCCAAATACGATCCAGAGGGAGGATGGCATCC 587
consensus_7479#5      GACAAAAACACACGGCACCCCCAACAATAGCGAACGTTATAAGCGGACGGGAAACTGGCG 538
                                                                                  

consensus_7479#0      AGATC------------------------------------------------------- 829
consensus_7479#4      ------------------------------------------------------------
consensus_7479#1      GAGAGAAAGAGATAAAGAATGTGGGTGGGAGAAAATGGCCACGGCTTAGGAACATCGATT 599
consensus_7479#3      GAGAGAAAGAGATAAAGAATGTGGGTGGGAGAAAATGGCCACGGCTTAGGAACATCGATT 460
consensus_7479#2      GGCACACTCTGGTTTGGAGCGGTGTTGACCGTTGCAGATTTCTGTTTGGTATGTGCAGAT 647
consensus_7479#5      GGATCATCCAACTTCACGGCGNCTATAANCAA-ACGGGGACAAGCTACAANCTAGCAGCA 597
                                                                                  

consensus_7479#0      ------------------------------------------------------------
consensus_7479#4      ------------------------------------------------------------
consensus_7479#1      GGCATATAGACTATTACTATAATTATTATTATTATACCTAAAAAAACAAGCAAGCAAATT 659
consensus_7479#3      GGCATATAGACTATTACTATAATTATTATTATTATACCTAAAAAAACAAGCAAGCAAATT 520
consensus_7479#2      CGTCTAAATTCATGAATAAAGTCTCATACGTGTATATC---------------------- 685
consensus_7479#5      ------------------------------------------------------------
                                                                                  

consensus_7479#0      ------------------------------------------------------------
consensus_7479#4      ------------------------------------------------------------
consensus_7479#1      TGTAAGCTGTAGGAAACGTGGATGGT---------------------------------- 685
consensus_7479#3      TGTAAGCTGTAGGAAACGTGGATGGTGTGCAGTAGCGTTCGATGTGTTGAATGTTGAAAG 580
consensus_7479#2      ------------------------------------------------------------
consensus_7479#5      ------------------------------------------------------------
                                                                                  

consensus_7479#0      ------------------------------------------------------------
consensus_7479#4      ------------------------------------------------------------
consensus_7479#1      ------------------------------------------------------------
consensus_7479#3      GCAACTAAAACGGAATATATTTATGGATAGAAAACACTAAAACAAAACAAAACAAAAAAA 640
consensus_7479#2      ------------------------------------------------------------
consensus_7479#5      ------------------------------------------------------------
                                                                                  

consensus_7479#0      ------------------------
consensus_7479#4      ------------------------
consensus_7479#1      ------------------------
consensus_7479#3      GGAATGGTAATAACAACAATTAGG 664
consensus_7479#2      ------------------------
consensus_7479#5      ------------------------