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Anopheles gambiae
cluster # 7572 cluster # 7572       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7572#0 length = 1323 sequences # 4  
consensus_7572#1 length = 1266 sequences # 1  
consensus_7572#2 length = 783 sequences # 1  
consensus_7572#3 length = 714 sequences # 1  

consensusID : consensus_7572#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1323
fasta sequence
                              [TCCGAGCCGTTCAAAACCAAATACCGCGAGCAGGGCGGAGCAGTTGTAGGGCGATAACCGTACGTTCGCACCAAGAAAGCAAACAAACGGAAGAAGAGGAAGAAGTAGAAGAAGAAGAAAACCCCCAGGAAAAAATGCAACACGCACAGGACAAAGGGCGCCCAGATGTGCAGAAACACACAAAACAAACGCTTCAGTATGTAATAATTGTCGGCAGTATTGTTATTTATCGATTAGTCAAATGGTTCGTACCCACGTATGTGTGTGTATGTGTATGTGTGTGTGTGCGTATAGGCATTATTAGGAAGCAAATCCGTGCTCCGAGCCGTTCAAAACCAAATACCGCGAGCAGGGCGGAGCAGTTGTAGGGCGATAACCGTACGTTTAAACCAGAAATACCAAAGTCAATTATGTATAGCGTGTGTACCGCGGGTGGTGTGTGGTATGCGCAGAGGGTGTACTAAGATGCAGGCCACTCACACACACACACACACACGCACATGCACATGCATAAAGTAATCTATCCGTAGCCGCGGCACGCTGCGTAATGTCGGCCGCCTTCGTTTTGCGCTTTGGATCCGTAGTTGCGCGTTTTAAGGGAAATAGCATTCCGGCCGGCCCCTCCAAGTAGGGCAGCCTGGCAAGAGTAGCTAGTAGAAGAGGAGATAGTCCTGGAAACGCTAAGAAAACCAAACAAACAAACAAACAAACAAACAAAGAAAACATGAAAACCCTTTGTAGCAAACCGATTACATCGATAGGGATGGCCCGAGGGCCAGTGTAGGAGATAATAGCAGTCTAAGTAGTGGAAATCATATCGCTTACCGATATCTATACATATAAATATACACATATAGGGCGTAGCGAGTACGTTGCCTCGACAGTATGACACTATCCATTCCCGGTTCCGTTGCGCTGCCGTTTCGTTGCGCGCCGTATTATTGTTTCGCTTGCTCCGGGGTTTGCCCACCCCCCCGGTATGTTTTTAAGGACGCGTTTTCCAGTTACCGCAACGGCTGGTCCCACTGCCGGCCGACCACTGTATCGTTGTGGTTGCTGTGTAACTGACGCCATCAGCTGGGTAGTGCCTTCACGGCCTAGACCCGGTCCCGGCTGCTGCTTTAGTGCTTGTTGGAAAAGTGGAACCGTACGCTTGCCGCGATATATATCGTCTACCTTAGTGAAGCTGCAGCTTGTAGCGAACAGCAGGGACACTTGCAATATTAGAAGTTTGGCCTTCGGTTTATCACAAAAAAAAAAAAACAATGGGACAGGTTTGCAGGTTGTGTGTCCACTCAGTTGCAGTTGCAGTAAAGAATAATT]

[+] EMBL BX621865             [TCCGAGCCGTTCAAAACCAAATACCGCGAGCAGGGCGGAGCAGTTGTAGGGCGATAACCGTACGTTCGCACCAAGAAAGCAAACAAACGGAAGAAGAGGAAGAAGTAGAAGAAGAAGAAAACCCCCAGGAAAAAATGCAACACGCACAGGACAAAGGGCGCCCAGATGTGCAGAAACACACAAAACAAACGCTTCAGTATGTAATAATTGTCGGCAGTATTGTTATTTATCGATTAGTCAAATGGTTCGTACCCACGTATGTGTGTGTATGTGTATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX608361             [                                                                                                                           CCCAGGAAAAAATGCAACACGCACAGGACAAAGGGCGCCCAGATGTGCAGAAACACACAAAACAAACGCTTCAGTATGTAATAATTGTCGGCAGTATTGTTATTTATCGATTAGTCAAATGGTTCGTACCCACGTATGTGTGTGTATGTGTGTGTGTGTGTGTGCGTATAGGCATTATTAGGAAGCAAATCCGTGCTCCGAGCCGTTCAAAACCAAATACCGCGAGCAGGGCGGAGCAGTTGTAGGGCGATAACCGTACGTTTAAACCAGAAATACCAAAGTCAATTATGTATAGCGTGTGTACCGCGGGTGGTGTGTGGTATGCGCAGAGGGTGTACTAAGATGCAGGCCACTCACACACACACACACACACGCACATGCACATGCATAAAGTAATCTATCCGTAGCCGCGGCACGCTGCGTAATGTCGGCCGCCTTCGTTTTGCGCTTTGGATCCGTAGTTGCGCGTTTTAAGGGAAATAGCATTCCGGCCGGCCCCTCCAAGTAGGGCAGCCTGGCAAGAGTAGCTAGTAGAAGAGGAGATAGTCCTGGAAACGCTAAGAAAACCAAACAAACAAACAAACAAACAAACAAAGAAAACATGAAAACCCTTTGTAGCAAACCGATTACATCGATAGGGATGGCCCGAGGGCCAGTGTAGGAGATAATAGCAGTCTAAGTAGTGGAAATCATATCGCTTACCGATATCTATACATATAAATATACACATATAGGGCGTAGCGAGTACGTTGCCTCGACAGTATGACACTATCCATTCCCGGTTCCGTTGCGCTGCCGTTTCGTTGCGCGCCGTATTATTGTTTCGCTTGCTCCGGGGTTTGCCCACCCC                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX608494             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGTAGCCGCGGCACGCTGCGTAATGTCGGCCGCCTTCGTTTTGCGCTTTGGATCCGTAGTTGCGCGTTTTAAGGGAAATAGCATTCCGGCCGGCCCCTCCAAGTAGGGCAGCCTGGCAAGAGTAGCTAGTAGAAGAGGAGATAGTCCTGGAAACGCTAAGAAAACCAAACAAACAAACAAACAAACAAACAAAGAAAACATGAAAACCCTTTGTAGCAAACCGATTACATCGATAGGGATGGCCCGAGGGCCAGTGTAGGAGATAATAGCAGTCTAAGTAGTGGAAATCATATCGCTTACCGATATCTATACATATAAATATACACATATAGGGCGTAGCGAGTACGTTGCCTCGACAGTATGACACTATCCATTCCCGGTTCCGTTGCGCTGCCGTTTCGTTGCGCGCCGTATTATTGTTTCGCTTGCTCCGGGGTTTGCCCACCCCCCCGGTATGTTTTTAAGGACGCGTTTTCCAGTTACCGCAACGGCTGGTCCCACTGCCGGCCGACCACTGTATCGTTGTGGTTGCTGTGTAACTGACGCCATCAGCTGGGTAGTGCCTTCACGGCCTAGACCCGGTCCCGGCTGCTGCTTTAGTGCTTGTTGGAAAAGTGGAACCGTACGCTTGCCGCGATATATATCGTCTACCTTAGTGAAGCTGCAGCTTGTAGCGAACAGCAGGGACA                                                                                                             ]
[+] EMBL BX608696             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCCGGCCGGCCCCTCCAAGTAGGGCAGCCTGGCAAGAGTAGCTAGTAGAAGAGGAGATAGTCCTGGAAACGCTAAGAAAACCAAACAAACAAACAAACAAACAAACAAAGAAAACATGAAAACCCTTTGTAGCAAACCGATTACATCGATAGGGATGGCCCGAGGGCCAGTGTAGGAGATAATAGCAGTCTAAGTAGTGGAAATCATATCGCTTACCGATATCTATACATATAAATATACACATATAGGGCGTAGCGAGTACGTTGCCTCGACAGTATGACACTATCCATTCCCGGTTCCGTTGCGCTGCCGTTTCGTTGCGCGCCGTATTATTGTTTCGCTTGCTCCGGGGTTTGCCCACCCCCCCGGTATGTTTTTAAGGACGCGTTTTCCAGTTACCGCAACGGCTGGTCCCACTGCCGGCCGACCACTGTATCGTTGTGGTTGCTGTGTAACTGACGCCATCAGCTGGGTAGTGCCTTCACGGCCTAGACCCGGTCCCGGCTGCTGCTTTAGTGCTTGTTGGAAAAGTGGAACCGTACGCTTGCCGCGATATATATCGTCTACCTTAGTGAAGCTGCAGCTTGTAGCGAACAGCAGGGACACTTGCAATATTAGAAGTTTGGCCTTCGGTTTATCACAAAAAAAAAAAAACAATGGGACAGGTTTGCAGGTTGTGTGTCCACTCAGTTGCAGTTGCAGTAAAGAATAATT]


>consensus_7572#0 TCCGAGCCGTTCAAAACCAAATACCGCGAGCAGGGCGGAGCAGTTGTAGGGCGATAACCG TACGTTCGCACCAAGAAAGCAAACAAACGGAAGAAGAGGAAGAAGTAGAAGAAGAAGAAA ACCCCCAGGAAAAAATGCAACACGCACAGGACAAAGGGCGCCCAGATGTGCAGAAACACA CAAAACAAACGCTTCAGTATGTAATAATTGTCGGCAGTATTGTTATTTATCGATTAGTCA AATGGTTCGTACCCACGTATGTGTGTGTATGTGTATGTGTGTGTGTGCGTATAGGCATTA TTAGGAAGCAAATCCGTGCTCCGAGCCGTTCAAAACCAAATACCGCGAGCAGGGCGGAGC AGTTGTAGGGCGATAACCGTACGTTTAAACCAGAAATACCAAAGTCAATTATGTATAGCG TGTGTACCGCGGGTGGTGTGTGGTATGCGCAGAGGGTGTACTAAGATGCAGGCCACTCAC ACACACACACACACACGCACATGCACATGCATAAAGTAATCTATCCGTAGCCGCGGCACG CTGCGTAATGTCGGCCGCCTTCGTTTTGCGCTTTGGATCCGTAGTTGCGCGTTTTAAGGG AAATAGCATTCCGGCCGGCCCCTCCAAGTAGGGCAGCCTGGCAAGAGTAGCTAGTAGAAG AGGAGATAGTCCTGGAAACGCTAAGAAAACCAAACAAACAAACAAACAAACAAACAAAGA AAACATGAAAACCCTTTGTAGCAAACCGATTACATCGATAGGGATGGCCCGAGGGCCAGT GTAGGAGATAATAGCAGTCTAAGTAGTGGAAATCATATCGCTTACCGATATCTATACATA TAAATATACACATATAGGGCGTAGCGAGTACGTTGCCTCGACAGTATGACACTATCCATT CCCGGTTCCGTTGCGCTGCCGTTTCGTTGCGCGCCGTATTATTGTTTCGCTTGCTCCGGG GTTTGCCCACCCCCCCGGTATGTTTTTAAGGACGCGTTTTCCAGTTACCGCAACGGCTGG TCCCACTGCCGGCCGACCACTGTATCGTTGTGGTTGCTGTGTAACTGACGCCATCAGCTG GGTAGTGCCTTCACGGCCTAGACCCGGTCCCGGCTGCTGCTTTAGTGCTTGTTGGAAAAG TGGAACCGTACGCTTGCCGCGATATATATCGTCTACCTTAGTGAAGCTGCAGCTTGTAGC GAACAGCAGGGACACTTGCAATATTAGAAGTTTGGCCTTCGGTTTATCACAAAAAAAAAA AAACAATGGGACAGGTTTGCAGGTTGTGTGTCCACTCAGTTGCAGTTGCAGTAAAGAATA ATT



consensusID : consensus_7572#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1266
fasta sequence
                              [GCAGAATTGCCCGAGGGTTGGCACAGTATTGATCATTAATTCGGAGGCTGACAACCGTTTCTCATCATGCGCTATTAGCAAGCACGCTCTGGTTGCCCAAGGTTTAGATATAGAGCCCCGATTGCCGATGCCAAAGCTCGGTTCTTATATGCCCGCGGTGCACGTTCGCACCAAGAAAGCAAACAAACGGAAGAAGAGGAAGAAGTAGAAGAAGAAGAAAACCCCTAGGTAAAACATATTGCTAACACTGCACTAGTGACAAAGTGGCTGCCCTAGATTGTTGCAGAATACACACAATAACTATAACTGCCTTCAGTAATTGTTCATACACTTTGTCGACGCNACTGNTCACTCTTGTCACTCNCTACTCCCGNACTTCTAACGCTCCACAACTTGGGCTCTCCCGGGTAACACCAACTGGTTTACTTGGTTTGGTTAGTTGGNTAACTTGGNTTGGCATGGCTTGCTGGNCTTGNCTCGCTAGGCTTGGCCCGGCTTAACTTTTACANGCNGACCCAACTTTTTCANACCATTCTCAACACGGCNCGCCAACAACGGCCCCCAAAACAAAATTACCCCCCCAGGGGTGTTNGNGGGCNCCCATTANCCTCCCCTGTGGGAAAATGTGGTCNCCCCCCCCGGGGCTTATCCCACAAAAATCCGACTANCACCCCCCNCAAAATCAACCTAAGCGTTTAAAGACCCCCCCAGGGGCCCCCGGCGCAAACAGGGGGCCCAAAACTGTGCACGAGAGGCACCCCATCGTGGTCGTGACTGCCGCAAAACATGGTNGCNCCCCNCGCAAAAACGCNCGCCCTACCAACCTATTGGGCGGCGTTCATTCAAAAAAGCCCATGGTGACCGGAGGACCCCCCCCTATGCTGGCTACAAAAAAACCTTTCCNACAGAGAATANAAGCNCCTCTCCCCCCCNTTNGTGCGGCGTCGTTTTATTAAAAAACAACCCNCCATNGTGGGAGACGATTTTTTTNTANCANCAACATTCTTTCTACAACAAACTTACCAACACTCTTCTCAACCAATAATATCTCCATCCAACCCCCATAAAAAAACATCCAGCCCCTCCTACCAAANAATCATCCCAACGTTACNCACATAAAACCATGATTTTTTTTTATANACAAANAACCACCCCCCACACCCCCCCACNCCANAAAAAACATCANCCATCCTACTCACAAACAATNGCGCGCGACGATNCTTTATTTATACCACCCCACACCATCCAACTAAACTTGACAACACA]

[+] EMBL AL931361             [GCAGAATTGCCCGAGGGTTGGCACAGTATTGATCATTAATTCGGAGGCTGACAACCGTTTCTCATCATGCGCTATTAGCAAGCACGCTCTGGTTGCCCAAGGTTTAGATATAGAGCCCCGATTGCCGATGCCAAAGCTCGGTTCTTATATGCCCGCGGTGCACGTTCGCACCAAGAAAGCAAACAAACGGAAGAAGAGGAAGAAGTAGAAGAAGAAGAAAACCCCTAGGTAAAACATATTGCTAACACTGCACTAGTGACAAAGTGGCTGCCCTAGATTGTTGCAGAATACACACAATAACTATAACTGCCTTCAGTAATTGTTCATACACTTTGTCGACGCNACTGNTCACTCTTGTCACTCNCTACTCCCGNACTTCTAACGCTCCACAACTTGGGCTCTCCCGGGTAACACCAACTGGTTTACTTGGTTTGGTTAGTTGGNTAACTTGGNTTGGCATGGCTTGCTGGNCTTGNCTCGCTAGGCTTGGCCCGGCTTAACTTTTACANGCNGACCCAACTTTTTCANACCATTCTCAACACGGCNCGCCAACAACGGCCCCCAAAACAAAATTACCCCCCCAGGGGTGTTNGNGGGCNCCCATTANCCTCCCCTGTGGGAAAATGTGGTCNCCCCCCCCGGGGCTTATCCCACAAAAATCCGACTANCACCCCCCNCAAAATCAACCTAAGCGTTTAAAGACCCCCCCAGGGGCCCCCGGCGCAAACAGGGGGCCCAAAACTGTGCACGAGAGGCACCCCATCGTGGTCGTGACTGCCGCAAAACATGGTNGCNCCCCNCGCAAAAACGCNCGCCCTACCAACCTATTGGGCGGCGTTCATTCAAAAAAGCCCATGGTGACCGGAGGACCCCCCCCTATGCTGGCTACAAAAAAACCTTTCCNACAGAGAATANAAGCNCCTCTCCCCCCCNTTNGTGCGGCGTCGTTTTATTAAAAAACAACCCNCCATNGTGGGAGACGATTTTTTTNTANCANCAACATTCTTTCTACAACAAACTTACCAACACTCTTCTCAACCAATAATATCTCCATCCAACCCCCATAAAAAAACATCCAGCCCCTCCTACCAAANAATCATCCCAACGTTACNCACATAAAACCATGATTTTTTTTTATANACAAANAACCACCCCCCACACCCCCCCACNCCANAAAAAACATCANCCATCCTACTCACAAACAATNGCGCGCGACGATNCTTTATTTATACCACCCCACACCATCCAACTAAACTTGACAACACA]


>consensus_7572#1 GCAGAATTGCCCGAGGGTTGGCACAGTATTGATCATTAATTCGGAGGCTGACAACCGTTT CTCATCATGCGCTATTAGCAAGCACGCTCTGGTTGCCCAAGGTTTAGATATAGAGCCCCG ATTGCCGATGCCAAAGCTCGGTTCTTATATGCCCGCGGTGCACGTTCGCACCAAGAAAGC AAACAAACGGAAGAAGAGGAAGAAGTAGAAGAAGAAGAAAACCCCTAGGTAAAACATATT GCTAACACTGCACTAGTGACAAAGTGGCTGCCCTAGATTGTTGCAGAATACACACAATAA CTATAACTGCCTTCAGTAATTGTTCATACACTTTGTCGACGCNACTGNTCACTCTTGTCA CTCNCTACTCCCGNACTTCTAACGCTCCACAACTTGGGCTCTCCCGGGTAACACCAACTG GTTTACTTGGTTTGGTTAGTTGGNTAACTTGGNTTGGCATGGCTTGCTGGNCTTGNCTCG CTAGGCTTGGCCCGGCTTAACTTTTACANGCNGACCCAACTTTTTCANACCATTCTCAAC ACGGCNCGCCAACAACGGCCCCCAAAACAAAATTACCCCCCCAGGGGTGTTNGNGGGCNC CCATTANCCTCCCCTGTGGGAAAATGTGGTCNCCCCCCCCGGGGCTTATCCCACAAAAAT CCGACTANCACCCCCCNCAAAATCAACCTAAGCGTTTAAAGACCCCCCCAGGGGCCCCCG GCGCAAACAGGGGGCCCAAAACTGTGCACGAGAGGCACCCCATCGTGGTCGTGACTGCCG CAAAACATGGTNGCNCCCCNCGCAAAAACGCNCGCCCTACCAACCTATTGGGCGGCGTTC ATTCAAAAAAGCCCATGGTGACCGGAGGACCCCCCCCTATGCTGGCTACAAAAAAACCTT TCCNACAGAGAATANAAGCNCCTCTCCCCCCCNTTNGTGCGGCGTCGTTTTATTAAAAAA CAACCCNCCATNGTGGGAGACGATTTTTTTNTANCANCAACATTCTTTCTACAACAAACT TACCAACACTCTTCTCAACCAATAATATCTCCATCCAACCCCCATAAAAAAACATCCAGC CCCTCCTACCAAANAATCATCCCAACGTTACNCACATAAAACCATGATTTTTTTTTATAN ACAAANAACCACCCCCCACACCCCCCCACNCCANAAAAAACATCANCCATCCTACTCACA AACAATNGCGCGCGACGATNCTTTATTTATACCACCCCACACCATCCAACTAAACTTGAC AACACA



consensusID : consensus_7572#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 783
fasta sequence
                              [GCCGTTCAAAACCAAATACCGCGAGCAGGGCGGAGCAGTTGTAGGGCGATAACCGTACGTTTAAACCAGAAATACCAAGCTGATTGCGCTGTAAATCGACGTACGCCCAGCCCAGTGCTTGGCTTTACCTTTCCTCGGTCTCATGGCCACTAGCTGCACCTACCTTGCCGGTCCGTAGTTAAGTCAGAACGTGAAGCCATGTTGCTGCGAAACACGCCCACACAAAAGACACAACGGCTCGATGGCTTGTGGTTTTCCGTTGTTGTTGCTGTTGCAAGTATTAGTAGCAGATTGAAATCGAACAAAAAAAATAATAATAACGTTTTGGACCAATTCCACCCTAGCATGCAGAAACATAACCCGCCCAAACGACGCCGCGATCGAATCTTACAAAACGAAGCAGAGATCATCCTCATGATCAAGCTGGTGTGGAAGCGTTTGGCACAGTATTGATCATTAATTCGGAGGCTGCACAACCGTTTCTCATCATGCGCTATTAGCAAGCACGCTCTGGTTGCCCAAGGTTTAGATATAGAGCCCCGATTGCCCGATGCCAAAGCTCGGTTCTTATAGCCCGCGGTGCACGTTCGCACCAAGAAAGCAAACAAACGGAAGAAGAGGAAGAAGTAGAAGAAGAAGAAAACCCCCAGGAAAAAATGCAACACACACACACACACGCACATGCACATGCATAAAGTAATCTATCCGTAGCCGCGGCACGCTGCGTAATGTCGGCCGCCTTCGTTTTGCGCTTTGGATCCGTAGTTGCGCGTTTTAAGGGAA]

[+] EMBL BX625594             [GCCGTTCAAAACCAAATACCGCGAGCAGGGCGGAGCAGTTGTAGGGCGATAACCGTACGTTTAAACCAGAAATACCAAGCTGATTGCGCTGTAAATCGACGTACGCCCAGCCCAGTGCTTGGCTTTACCTTTCCTCGGTCTCATGGCCACTAGCTGCACCTACCTTGCCGGTCCGTAGTTAAGTCAGAACGTGAAGCCATGTTGCTGCGAAACACGCCCACACAAAAGACACAACGGCTCGATGGCTTGTGGTTTTCCGTTGTTGTTGCTGTTGCAAGTATTAGTAGCAGATTGAAATCGAACAAAAAAAATAATAATAACGTTTTGGACCAATTCCACCCTAGCATGCAGAAACATAACCCGCCCAAACGACGCCGCGATCGAATCTTACAAAACGAAGCAGAGATCATCCTCATGATCAAGCTGGTGTGGAAGCGTTTGGCACAGTATTGATCATTAATTCGGAGGCTGCACAACCGTTTCTCATCATGCGCTATTAGCAAGCACGCTCTGGTTGCCCAAGGTTTAGATATAGAGCCCCGATTGCCCGATGCCAAAGCTCGGTTCTTATAGCCCGCGGTGCACGTTCGCACCAAGAAAGCAAACAAACGGAAGAAGAGGAAGAAGTAGAAGAAGAAGAAAACCCCCAGGAAAAAATGCAACACACACACACACACGCACATGCACATGCATAAAGTAATCTATCCGTAGCCGCGGCACGCTGCGTAATGTCGGCCGCCTTCGTTTTGCGCTTTGGATCCGTAGTTGCGCGTTTTAAGGGAA]


>consensus_7572#2 GCCGTTCAAAACCAAATACCGCGAGCAGGGCGGAGCAGTTGTAGGGCGATAACCGTACGT TTAAACCAGAAATACCAAGCTGATTGCGCTGTAAATCGACGTACGCCCAGCCCAGTGCTT GGCTTTACCTTTCCTCGGTCTCATGGCCACTAGCTGCACCTACCTTGCCGGTCCGTAGTT AAGTCAGAACGTGAAGCCATGTTGCTGCGAAACACGCCCACACAAAAGACACAACGGCTC GATGGCTTGTGGTTTTCCGTTGTTGTTGCTGTTGCAAGTATTAGTAGCAGATTGAAATCG AACAAAAAAAATAATAATAACGTTTTGGACCAATTCCACCCTAGCATGCAGAAACATAAC CCGCCCAAACGACGCCGCGATCGAATCTTACAAAACGAAGCAGAGATCATCCTCATGATC AAGCTGGTGTGGAAGCGTTTGGCACAGTATTGATCATTAATTCGGAGGCTGCACAACCGT TTCTCATCATGCGCTATTAGCAAGCACGCTCTGGTTGCCCAAGGTTTAGATATAGAGCCC CGATTGCCCGATGCCAAAGCTCGGTTCTTATAGCCCGCGGTGCACGTTCGCACCAAGAAA GCAAACAAACGGAAGAAGAGGAAGAAGTAGAAGAAGAAGAAAACCCCCAGGAAAAAATGC AACACACACACACACACGCACATGCACATGCATAAAGTAATCTATCCGTAGCCGCGGCAC GCTGCGTAATGTCGGCCGCCTTCGTTTTGCGCTTTGGATCCGTAGTTGCGCGTTTTAAGG GAA



consensusID : consensus_7572#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 714
fasta sequence
                              [AATCGCCCGAGGGTTAGCGGGTGGTGTGTGGTATGCGCAGAGGGTGTACTAAGATGCAGGCCATCACACACACACACACACACGCACATGCACATGCATAAAGTAATCTATCCGTAGCCGCGGCACGCTGCGTAATGTCGGCCGCCTATCGTATTTGCGCTCTTGGATCCGTAGTTGCGCGTTTAAGGGAAATAGCATTACCGGCCGGCCCTCCAAGTAGTGGCAGCCTGGCAAGAGTAGCTAGTAGAAGAGGAGATAGTACCTGAAACGCTAAGAAAACCAAACAAACAAACAAACAAACAAACAAAGAANAACATGAAAACCCTTTGTAGCAAAGCCGATTACATCGATAGGGATGGCCCGAGGGCCAGTGTAGGAGATAATAGCAGTCTAACGTAGTGGAAATCATATACGCTTACCGATATCTATACATATAAATATACACATATAGGGCGTAGCGAGCTCACGTNGCCTCGACNNGTATGACACNTAATACCATATCCCGGGACTCCCGANGGCGACTTGGCCGATAAGTCAGTTTGCAGCGCCAGATATAATAGGAGANACGCTATGGCTNCCGGAGGTTATGCCCAACCACCGCACCGAGAAATGTACAANAANGAGACGCGTTCAACNCCAGNCATCTACCTGACAAAACGAGCTGGTACCCCACCTGCACAGGGCGAACCACCTGTATCGTNTGTGGTTGCTGTG]

[+] EMBL AL694005             [AATCGCCCGAGGGTTAGCGGGTGGTGTGTGGTATGCGCAGAGGGTGTACTAAGATGCAGGCCATCACACACACACACACACACGCACATGCACATGCATAAAGTAATCTATCCGTAGCCGCGGCACGCTGCGTAATGTCGGCCGCCTATCGTATTTGCGCTCTTGGATCCGTAGTTGCGCGTTTAAGGGAAATAGCATTACCGGCCGGCCCTCCAAGTAGTGGCAGCCTGGCAAGAGTAGCTAGTAGAAGAGGAGATAGTACCTGAAACGCTAAGAAAACCAAACAAACAAACAAACAAACAAACAAAGAANAACATGAAAACCCTTTGTAGCAAAGCCGATTACATCGATAGGGATGGCCCGAGGGCCAGTGTAGGAGATAATAGCAGTCTAACGTAGTGGAAATCATATACGCTTACCGATATCTATACATATAAATATACACATATAGGGCGTAGCGAGCTCACGTNGCCTCGACNNGTATGACACNTAATACCATATCCCGGGACTCCCGANGGCGACTTGGCCGATAAGTCAGTTTGCAGCGCCAGATATAATAGGAGANACGCTATGGCTNCCGGAGGTTATGCCCAACCACCGCACCGAGAAATGTACAANAANGAGACGCGTTCAACNCCAGNCATCTACCTGACAAAACGAGCTGGTACCCCACCTGCACAGGGCGAACCACCTGTATCGTNTGTGGTTGCTGTG]


>consensus_7572#3 AATCGCCCGAGGGTTAGCGGGTGGTGTGTGGTATGCGCAGAGGGTGTACTAAGATGCAGG CCATCACACACACACACACACACGCACATGCACATGCATAAAGTAATCTATCCGTAGCCG CGGCACGCTGCGTAATGTCGGCCGCCTATCGTATTTGCGCTCTTGGATCCGTAGTTGCGC GTTTAAGGGAAATAGCATTACCGGCCGGCCCTCCAAGTAGTGGCAGCCTGGCAAGAGTAG CTAGTAGAAGAGGAGATAGTACCTGAAACGCTAAGAAAACCAAACAAACAAACAAACAAA CAAACAAAGAANAACATGAAAACCCTTTGTAGCAAAGCCGATTACATCGATAGGGATGGC CCGAGGGCCAGTGTAGGAGATAATAGCAGTCTAACGTAGTGGAAATCATATACGCTTACC GATATCTATACATATAAATATACACATATAGGGCGTAGCGAGCTCACGTNGCCTCGACNN GTATGACACNTAATACCATATCCCGGGACTCCCGANGGCGACTTGGCCGATAAGTCAGTT TGCAGCGCCAGATATAATAGGAGANACGCTATGGCTNCCGGAGGTTATGCCCAACCACCG CACCGAGAAATGTACAANAANGAGACGCGTTCAACNCCAGNCATCTACCTGACAAAACGA GCTGGTACCCCACCTGCACAGGGCGAACCACCTGTATCGTNTGTGGTTGCTGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7572#0      TCCGAGCCGTTCAAAACCAAATACCGCGAGCAGGGCGGAGCAGTTGTAGGGCGATAACCG 60
consensus_7572#3      ------------------------------------------------------------
consensus_7572#2      ------------------------------------------------------------
consensus_7572#1      -----------------------------GCAGAATTGCCCGAGGGTTGGCACAGTATTG 31
                                                                                  

consensus_7572#0      TACGTTCGCACCAAGAAAGCAAACAAACGGAAGAAGAGGAAGAAGTAGAAGAAGAAGAAA 120
consensus_7572#3      ------------------------------------------------------------
consensus_7572#2      ------------------------------------------------------------
consensus_7572#1      ATCATTAATTCGGAGGCTGACAACCGTTTCTCATCATGCGCTATTAGCAAGCACGCTCTG 91
                                                                                  

consensus_7572#0      ACCCCCAGGAAAAAATGCAACACGCACAGGACAAAGGGCGCCCAGATGTGCAGAAACACA 180
consensus_7572#3      ------------------------------------------------------------
consensus_7572#2      ------------------------------------------------------------
consensus_7572#1      GTTGCCCAAGGTTTAGATATAGAGCCCCGATTGCCGATGCCAAAGCTCGGTTCTTATATG 151
                                                                                  

consensus_7572#0      CAAAACAAACGCTTCAGTATGTAATAATTGTCGGCAGTATTGTTATTTATCGATTAGTCA 240
consensus_7572#3      ------------------------------------------------------------
consensus_7572#2      ------------------------------------------------------------
consensus_7572#1      CCCGCGGTGCACGTTCGCACCAAGAAAGCAAACAAACGGAAGAAGAGGAAGAAGTAGAAG 211
                                                                                  

consensus_7572#0      AATGGTTCGTACCCACGTATGTGTGTGTATGTGTATGTGTGTGTGTGCGTATAGGCATTA 300
consensus_7572#3      ------------------------------------------------------------
consensus_7572#2      ------------------------------------------------------------
consensus_7572#1      AAGAAGAAAACCCCTAGGTAAAACATATTGCTAACACTGCACTAGTGACAAAGTGGCTGC 271
                                                                                  

consensus_7572#0      TTAGGAAGCAAATCCGTGCTCCGAGCCGTTCAAAACCAAATACCGCGAGCAGGGCGGAGC 360
consensus_7572#3      ------------------------------------------------------------
consensus_7572#2      ------------------------GCCGTTCAAAACCAAATACCGCGAGCAGGGCGGAGC 36
consensus_7572#1      CCTAGATTGTTGCAGAATACACACAATAACTATAACTGCCTTCAGTAATTGTTCATACAC 331
                                                                                  

consensus_7572#0      AGTTGTAGGGCGA-TAACCGTACGTTTAAACCAGAAATACCAAAGTC--AATTATGTATA 417
consensus_7572#3      --------------------------------------------------------AATC 4
consensus_7572#2      AGTTGTAGGGCGA-TAACCGTACGTTTAAACCAGAAATACCAAGCT----------GATT 85
consensus_7572#1      TTTGTCGACGCNACTGNTCACTCTTGTCACTCNCTACTCCCGNACTTCTAACGCTCCACA 391
                                                                               *  

consensus_7572#0      GCGTGTGTACC-GCGGGTGG-TGTGTG--GTATGCGCAGAGGGTGTACTAAGATGCAGGC 473
consensus_7572#3      GCCCGAGGGTTAGCGGGTGG-TGTGTG--GTATGCGCAGAGGGTGTACTAAGATGCAGGC 61
consensus_7572#2      GCGCT-----------GTAA-ATCGAC--GTACGCCCAGCCCA-GTGCTTGGCTTTA--- 127
consensus_7572#1      ACTTGGGCTCTCCCGGGTAACACCAACTGGTTTACTTGGTTTGGTTAGTTGGNTAACTTG 451
                       *              **           **   *   *      *  *  * *      

consensus_7572#0      CACTCACACACACACACACAC---ACGCACATGCACATGCATAAAGTAATCTATCCGTAG 530
consensus_7572#3      CA-TCACACACACACACACAC---ACGCACATGCACATGCATAAAGTAATCTATCCGTAG 117
consensus_7572#2      CCTTTCCTCGGTCTCATGGCC---ACTAGC-TGCACCTACCTTGC-CGGTCCGTAGTTAA 182
consensus_7572#1      GNTTGGCATGGCTTGCTGGNCTTGNCTCGCTAGGCTTGGCCCGGCTTAACTTTTACANGC 511
                         *  *             *    *   *  *      *             *      

consensus_7572#0      CCGCGGCACGCT---GCGTAATGTCGGCCGCCT-TCGT---------TTTGCGCT-TTGG 576
consensus_7572#3      CCGCGGCACGCT---GCGTAATGTCGGCCGCCTATCGT--------ATTTGCGCTCTTGG 166
consensus_7572#2      GT-CAGAACGTG---AAGCCATGTTG-CTGCGAAACAC--------GCCCACACAAAAGA 229
consensus_7572#1      NGACCCAACTTTTTCANACCATTCTCAACACGGCNCGCCAACAACGGCCCCCAAAACAAA 571
                         *   **           **        *    *               *        

consensus_7572#0      ATCCGTAGTTGCGCGTTTTAAGGGAAATAGCATT-CCGGCCGGCCCCTCCAAGTAG-GGC 634
consensus_7572#3      ATCCGTAGTTGCGCGTTT-AAGGGAAATAGCATTACCGGCCGGCCC-TCCAAGTAGTGGC 224
consensus_7572#2      CACAACGGCTCGATGGCT--TGTGGTTTTCCGTTGTTG--TTGCTGTTGCAAGTATTAGT 285
consensus_7572#1      ATTACCCCCCCAGGGGTGTTNGNGGGCNCCCATTANCC-TCCCCTGTGGGAAAATGTGGT 630
                                    *      * *      * **         *      **      * 

consensus_7572#0      AGCCTGGC---AAGAGTAGCTAGTAGAAGAGGAGATAGTCCTGGAAACGCTAAGAAAACC 691
consensus_7572#3      AGCCTGGC---AAGAGTAGCTAGTAGAAGAGGAGATAGTACCTGAAACGCTAAGAAAACC 281
consensus_7572#2      AGCAGATT---GAAATCGAACAAAAAAAATAATAATAACGTTTTGGAC-CAATTCCACCC 341
consensus_7572#1      CNCCCCCCCCGGGGCTTATCCCACAAAAATCCGACTANCACCCCCCNC-AAAATCAACCT 689
                        *                     * **       **          *   *    * * 

consensus_7572#0      AAACAAACAAACAAACAAACAAAC-AAAGAAAA-CATGA--AAACCCTTTGTAGCAAA-C 746
consensus_7572#3      AAACAAACAAACAAACAAACAAAC-AAAGAANAACATGA--AAACCCTTTGTAGCAAAGC 338
consensus_7572#2      TAGCATGCAGAAACATAACCCGCCCAAACGACGCCGCGATCGAATCTTACAAAACGAAGC 401
consensus_7572#1      AAGCGTTTAAAGACCCCCCCAGGG--GCCCCCGGCGCAAACAGGGGGCCCAAAACTGTGC 747
                       * *    * * *      *              *   *             * *    *

consensus_7572#0      C-GATTACATCGATAGGGATGGCCCGA-GG-GCCAGTGTAGGAGATAATAGCAGTC-TAA 802
consensus_7572#3      C-GATTACATCGATAGGGATGGCCCGA-GG-GCCAGTGTAGGAGATAATAGCAGTC-TAA 394
consensus_7572#2      A-GAGATCATCCTCATGATCAAGCTGG-TGTGGAAGCGTTTGGCACAGTATTGATCATTA 459
consensus_7572#1      ACGAGAGGCACCCCATCGTGGTCGTGACTGCCGCAAAACATGGTNGCNCCCCNCGCAAAA 807
                        **      *   *          *   *    *      *             *   *

consensus_7572#0      -GTAGTGGAAATCATAT-CGCTTACCGATATCTA-TACATATAAATATACACATATAGGG 859
consensus_7572#3      CGTAGTGGAAATCATATACGCTTACCGATATCTA-TACATATAAATATACACATATAGGG 453
consensus_7572#2      ATTCGGAGGCTGCACAACCGTTTCTCATCATGCGCTATTAGCAAGCACGCTCTGGTTGCC 519
consensus_7572#1      ACGCNCGCCCTACCAACCTATTGGGCGGCGTTCA-TTCAAAAAAGCCCATGGTGACCGGA 866
                                  *  *     *   *    *    *      **             *  

consensus_7572#0      CGTAGCGAGT--ACGTTGCCTC------GACAG-TATGACACTATCCATTCCCGGTTCCG 910
consensus_7572#3      CGTAGCGAGCTCACGTNGCCTC------GACNNGTATGACACN--TAATACCATATCCCG 505
consensus_7572#2      CAAGGTTTAGATATAGAGCCCC------GATTG-CCCGATGCC---AAAGCTCGGTTCTT 569
consensus_7572#1      GGACCCCCCCCTATGCTGGCTACAAAAAAACCTTTCCNACAGAGAATANAAGCNCCTCTC 926
                                  *    * *         *        *        *         *  

consensus_7572#0      TTGCGCTGCCGTTTCGTTGCGCGCCG--TATTATTGTTTCG--CTTGCTCCG--GGGTTT 964
consensus_7572#3      --GGACTCCCG----ANGGCGACTTG--GCCGATAAGTCAG--TTTGCAGCGCCAGATAT 555
consensus_7572#2      ATAGCCCGCGGTGCACGTTCGCACCA--AGAAAGCAAACAA--ACGGAAGAAGAGGAAGA 625
consensus_7572#1      CCCCCCNTTNGTGCGGCGTCGTTTTATTAAAAAACAACCCNCCATNGTGGGAGACGATTT 986
                           *    *        **           *             *        *    

consensus_7572#0      GCCCACCCCCCCGGTATGTTTTTAAGGACGCGTTTTCCAGTTACCGCAACGGCTGGTCCC 1024
consensus_7572#3      AATAGGAGANACGCTATGGCTNCC-GGAGGTTATGCCCAACCACCGCACCGAGAAATGT- 613
consensus_7572#2      AGTAGAAGAAGAAGAAAACCCCCA-GGAAAAAATGCAACACACACACACACACGCACATG 684
consensus_7572#1      TTTTNTANCANCAACATTCTTTCTACAACAAACTTACCAACACTCTTCTCAACCAATAAT 1046
                                     *           *     *          *               

consensus_7572#0      ACTGCCGGCCGACCACTGTATCGTTGTGGTTGCTGTGTAACTGACGCCATCAGCTGGGTA 1084
consensus_7572#3      ACAANAANGAGACGCGTTCAACNCCA-----GNCATCTACCTGACAAAACGAGCTG---- 664
consensus_7572#2      CACATGCATAAAGTAATCTATCCGTA--GCCGCGGCACGCTGCGTAATGTCGGCCG--CC 740
consensus_7572#1      ATCTCCATCCAACCCCCATAAAAAAACATCCAGCCCCTCCTACCAAANAATCATCC---C 1103
                                 *       *                                        

consensus_7572#0      GTGCCTTCACGGCCTAGACCCGGTCCCGGCTGCTGCTTTAGTGCTTGTTGGAAAAGTGGA 1144
consensus_7572#3      GTACCCCACCTGCACAGGGC--GAACCACCTGTATCGTNTGTGGTTGCTGTG-------- 714
consensus_7572#2      TTCGTTTTGCGCTTTGGATCCGTAGTTGCGCGTTTTAAGGGAA----------------- 783
consensus_7572#1      AACGTTACNCACATAAAACC-ATGATTTTTTTTTATANACAAANAACCACCCCCCACACC 1162
                               *         *                                        

consensus_7572#0      ACCGTACGCTTGCCGCGATATATATCGTCTACCTTAGTGAAGCTGCAGCTTGTAGCGAAC 1204
consensus_7572#3      ------------------------------------------------------------
consensus_7572#2      ------------------------------------------------------------
consensus_7572#1      CCCCCACNCCANAAAAAACATCANCCATCCTACTCACAAACAATNGCGCGCGACGATNCT 1222
                                                                                  

consensus_7572#0      AGCAGGGACACTTGCAATATTAGAAGTTTGGCCTTCGGTTTATCACAAAAAAAAAAAAAC 1264
consensus_7572#3      ------------------------------------------------------------
consensus_7572#2      ------------------------------------------------------------
consensus_7572#1      TTATTTATACCACCCCACACCATCCAACTAAACTTGACAACACA---------------- 1266
                                                                                  

consensus_7572#0      AATGGGACAGGTTTGCAGGTTGTGTGTCCACTCAGTTGCAGTTGCAGTAAAGAATAATT 1323
consensus_7572#3      -----------------------------------------------------------
consensus_7572#2      -----------------------------------------------------------
consensus_7572#1      -----------------------------------------------------------
                                                                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)