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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7584#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1051 fasta sequence
[AACCACGAGGTCCGAAAGCGATCACACAGTGAGGCGGTGCATCTTTTTCAGTTGGATATCGTCACAGTACACATTTTGTGTGTAAAAATGTTCTACTAACAACAAGTGTGATGATGTTTCGTTCGCTCGCGAGCTAATAACATTCCAGTGGTGAAATCTGGTTCTAAAAATTGCAAAAGTGTACCAGTGTGCGTGAAATTACCACACATGACGTACCTACTATAGTGAATATTACTGCACGGAACCATTTGTAAAGCAAAGCATTTTTGACTGTAAAACATGTCGCTAACGGATAAGGAATACTATAATCTGACTATCAGTATTTCCAAAGCGCTCAGCAATGTGGAAATGCCCATCAAGGTGAAGCACGTCCGTGCGG-CTATCATTGGTACATTCCACAGCAATGGTGCGCATGCATTTTGGGCCATTGCCATCCGGCAACCGATACAGGACAATCGGATAGTGGCGTGGAAGTTCTGCCATCTGCTGCACAAGATACTGCGCGAGGGCCAC-CCGCTATGCTGTCAGCATTCCATGCGGCACCGGGCCATGCTGCTGGAGGCCGGAAAGCTGTGGGGCCATCTGAACGATGGGTATGGTATTTGCATCAAGCACTACACCAAGCTGCTCGTGACGAAGCTCGAGTTTCACGATCGCAACCCCCGCGTACCGGGCAGCTTATCGTTGCGCCAGGGCGATCCGGAAAAG-ATTGGCGAGGGAGACATTAACATTTATTTCCAGCTCGCAGTTGAGATATTCGACTATCTGGATGATATCATTGCGCTGCAAGGCACAATATTCAATTCCATCACAACGTTCTGCGTCAGTTCGATGACTTCGGCGGGACAGTGTCGTTTGGCACCGTTGATTCCTTGCATTCAAGACTCGAACCCACTGTACGATATGCTGGTGCGCGTGATGTTTAAACTGCACGCCAACTTACCCTCAGATCTGCTGACTGGGCATCGTCAGCGCTTCAACACACTGTTCCATCAGCTGAAATCGTTCTACGGACAGTCGCGCAATCTGCAGTATTTTGTTAACCTGATCA]
[+] EMBL CNS09MVZ [AACCACGAGGTCCGAAAGCGATCACACAGTGAGGCGGTGCATCTTTTTCAGTTGGATATCGTCACAGTACACATTTTGTGTGTAAAAATGTTCTACTAACAACAAGTGTGATGATGTTTCGTTCGCTCGCGAGCTAATAACATTCCAGTGGTGAAATCTGGTTCTAAAAATTGCAAAAGTGTACCAGTGTGCGTGAAATTACCACACATGACGTACCTACTATAGTGAATATTACTGCACGGAACCATTTGTAAAGCAAAGCATTTTTGACTGTAAAACATGTCGCTAACGGATAAGGAATACTATAATCTGACTATCAGTATTTCCAAAGCGCTCAGCAATGTGGAAATGCCCATCAAGGTGAAGCACGTCCGTGCGGTCTATCATTGGTACATTCCACAGCAATGGTGCGCATGCATTTTGGGCCATTGCCATCCGGCAACCGATACAGGACAATCGGATAGTGGCGTGGAAGTTCTGCCATCTGCTGCACAAGATACTGCGCGAGGGCCAC CCGCTATGCTGTCAGCATTCCATGCGGCACCGGGCCATGCTGCTGGAGGCCGGAAAGCTGTGGGGCCATCTGAACGATGGGTATGGTATTTGCATCAAGCACTACACCAAGCTGCTCGTGACGAAGCTCGAGTTTCACGATCGCAACCCCCGCGTACCGGGCAGCTTATCGTTGCGCCAGGGCGATCCGGAAAAGCATTGGCGAGGGAGACATTAACATTTATTTCCAGCTCGCAGTTGAGATATTCGACTATCTGGATGATATCATTGCGCTGCAAGGCACAATATTCAATTCCATCACAACGTTCTGCGTCAGTTCGATGACTTCGGCGGGACAGTGTCGTTTGGCACCGTTGATTCCTTGCATTCAAGACTCGAACCCACTGTACGATATGCTGGTGCGCGTGATGTTT AACTGCACGCCAACTTACCCTCAGATCTGCTGACTGGGCATCGTCAGCGCTTCAACACACTGTTCCATCAGCTGAAATCGTTCTACGGACAGTCGCGCAATCTGCAGTA ]
[+] EMBL CNS08JD8 [ CGATCACACAGTGAGGCGGTGCATCTTTTTCAGTTGGATATCGTCACAGTACACATTTTGTGTGTAAAAATGTTCTACTAACAACAAGTGTGATGATGTTTCGTTCGCTCGCGAGCTAATAACATTCCAGTGGTGAAATCTGGTTCTAAAAATTGCAAAAGTGTACCAGTGTGCGTGAAATTACCACACATGACGTACCTACTATAGTGAATATTACTGCACGGAACCATTTGTAAAGCAAAGCATTTTTGACTGTAAAACATGTCGCTAACGGATAAGGAATACTATAATCTGACTATCAGTATTTCCAAAGCGCTCAGCAATGTGGAAATGCCCATCAAGGTGAAGCACGTCCGTGCGG CTATCATTGGTACATTCCACAGCAATGGTGCGCATGCATTTTGGGCCATTGCCATCCGGCAACCGATACAGGACAATCGGATAGTGGCGTGGAAGTTCTGCCATCTGCTGCACAAGATACTGCGCGAGGGCCAC CCGCTATGCTGTCAGCATTCCATGCGGCACCGGGCCATGCTGCTGGAGGCCGGAAAGCTGTGGGGCCATCTGAACGATGGGTATGGTATTTGCATCAAGCACTACACCAAGCTGCTCGTGACGAAGCTCGAGTTTCACGATCGCAACCCCCGCGTACCGGGCAGCTTATCGTTGCGCCAGGGCGATCTGGAAAAG ATTGGCGAGGGAGACATTAACATTTATTTCCAGCTCGCAGTTGAGATATTCGACTATCTGGATGATATCATTGCGCTGCAAGGCACAATATTCAATTCCATCACAACGTTCTGCGTCAGTTCGATGACTTCGGCGGGACAGTGTCGTTTGGCACCGTTGATTCCTTGCATTCAAGACTCGAACCCACTGTACGATATGCTGGTGCGCGTGATGTTTAAACTGCACGCCAACTTACCCTC ]
[-] EMBL CNS09MW0 [ TTGGATATCGTCACAGTACACATTTTGTGTGTAAAAATGTTCTACTAACAACAAGTGTGATGATGTTTCGTTCGCTCGCGAGCTAATAACATTCCAGTGGTGAAATCTGGTTCTAAAAATTGCAAAAGTGTACCAGTGTGCGTGAAATTACCACACATGACGTACCTACTATAGTGAATATTACTGCACGGAACCATTTGTAAAGCAAAGCATTTTTGACTGTAAAACATGTCGCTAACGGATAAGGAATACTATAATCTGACTATCAGTATTTCCAAAGCGCTCAGCAATGTGGAAATGCCCATCAAGGTGAAAGACGTCCGTGCGG CTATCATTGGTACATTCCACAGCAATGGTGCGCATGCATTTTGGGCCATTGCCATCCGGCAACCGATACAGGACAATCGGATAGTGGCGTGGAAGTTCTGCCATCTGCTGCACAAGATACTGCGCGAGGGCCACTCCGCTATGCTGTCAGCATTCCATGCGGCACCGGGCCATGCTGCTGGAGGCCGGAAAGCTGTGGGGCCATCTGAACGATGGGTATGGTATTTGCATCAAGCACTACACCAAGCTGCTCGTGACGAAGCTCGAGTTTCACGATCGCAACCCCCGCGTACCGGGCAGCTTATCGTTGCGCCAGGGCGATCCGGAAAAG ATTGGCGAGGGAGACATTAACATTTATTTCCAGCTCGCAGTTGAGATATTCGACTATCTGGATGATATCATTGCGCTGCAAGGCACAATATTCAATTCCATCACAACGTTCTGCGTCAGTTCGATGACTTCGGCGGGACAGTGTCGTTTGGCACCGTTGATTCCTTGCATTCAAGACTCGAACCCACTGTACGATATGCTGGTGCGCGTGATGTTTAAACTGCACGCCAACTTACCCTCAGATCTGCTGACTGGGCATCGTCAGCGCTTCAACACACTGTTCCATCAGCTGAAATCGTTCTACGGACAGTCGCGCAATCTGCAGTATTTTGTTAACCTGATCA]
[-] EMBL CNS08JD9 [ AAAAATGTTCTACTAACAACAAGTGTGATGATGTTTCGTTCGCTCGCGAGCTAATAACATTCCAGTGGTGAAATCTGGTTCTAAAAATTGCAAAAGTGTACCAGTGTGCGTGAAATTACCACACATGACGTACCTACTATAGTGAATATTACTGCACGGAACCATTTGTAAAGCAAAGCATTTTTGACTGTAAAACATGTCGCTAACGGATAAGGAATACTATAATCTGACTATCAGTATTTCCAAAGCGCTCAGCAATGTGGAAATGCCCATCAAGGTGAAAGACGTCCGTGCGG CTATCATTGGTACATTCCACAGCAATGGTGCGCATGCATTTTGGGCCATTGCCATCCGGCAACCGATACAGGACAATCGGATAGTGGCGTGGAAGTTCTGCCATCTGCTGCACAAGATACTGCGCGAGGGCCAC CCGCTATGCTGTCAGCATTCCATGCGGCACCGGGCCATGCTGCTGGAGGCCGGAAAGCTGTGGGGCCATCTGAACGATGGGTATGGTATTTGCATCAAGCACTACACCAAGCTGCTCGTGACGAAGCTCGAGTTTCACGATCGCAACCCCCGCGTACCGGGCAGCTTATCGTTGCGCCAGGGCGATCTGGAAAAG ATTGGCGAGGGAGACATTAACATTTATTTCCAGCTCGCAGTTGAGATATTCGACTATCTGGATGATATCATTGCGCTGCAAGGCACAATATTCAATTCCATCACAACGTTCTGCGTCAGTTCGATGACTTCGGCGGGACAGTGTCGTTTGGCACCGTTGATTCCTTGCATTCAAGACTCGAACCCACTGTACGATATGCTGGTGCGCGTGATGTTTAAACTGCACGCCAACTTACCCTCAGATCTGCTGACTGGGCATCGTCAGCGCTTCAACACACTGTTCCATCAGCTG ]
consensusID : consensus_7584#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 943 fasta sequence
[CTGTTGGCCTACTGGAATTGGCAGTACGCCCTGACCAGGCTCAGTATTGATTCTGTGAAAGTGAAACAGTGAGGATCATCGAAGGTGGGATCCGAAAGTACCTACTATAGTGAATATTACTGCACGGAACCATTTGTAAAGCAAAGCATTTTTAACTGTAAAACATGTCGCTAACGGATAAGGAATACTATAATCTGACTATCAGTATTTCCAAAGCGCTCAGCAATGTGGAAATGCCCATCAAGGTAAAAGACGTCCGTGCGG-CTATCATTGGTACATTCCACAGCAATGGTGCGCATGCATTTTG-G-GCCATTGCCATACCGGCAACCGATACAGGACAATCGGATAGTGGCGTGGAAGTTCTGCCATCTGCTGCACAAGATACTGCGCGAGGGCCACCCGCTATGCTGTCAGCATTCCATGCGGCACCGGGCCATGCTGCTGGAGGCCGGAAAGCTGTGGGGCCATCTGAACGATGGGTATGGTATTTGCATCAAGCACTACACCAAGCTGCTCGTGACGAAGCTCGAGTTTCACGATCGCAACCCCCGCGTACCGGGCAGCTTATCGTTGCGCCAGGGCGATCTGGAAAAGATTGGCGAGGGAGACATTAACATTTATTTCCAGCTCGCAGTTGAGATATTCGACTATCTGGATGATATCATTGCGCTGCAAGGCACAATATTCAATTCCATCACAACGTTCTGCGTCAGTTCGATGACTTCGGCGGGACAGTGTCGTTTGGCACCGTTGATTCC-TTGCATTCAAGACTCGAACCCACTGTACGATATGCTGGTGCGCGTGATGTTTAAACTGCACGCCAACTTACCCTCAGATCTGCTGACTGGGCATCGTCAGCGCTTCAACACACTGTTCCATCAGCTGAAATCGTTCTACGGACAGTCGCGCAATCTGCAGTATTTTGTTAACCTGATCACCATGA]
[-] EMBL CNS09P50 [CTGTTGGCCTACTGGAATTGGCAGTACGCCCTGACCAGGCTCAGTATTGATTCTGTGAAAGTGAAACAGTGAGGATCATCGAAGGTGGGATCCGAAAGTACCTACTATAGTGAATATTACTGCACGGAACCATTTGTAAAGCAAAGCATTTTTAACTGTAAAACATGTCGCTAACGGATAAGGAATACTATAATCTGACTATCAGTATTTCCAAAGCGCTCAGCAATGTGGAAATGCCCATCAAGGTAAAAGACGTCCGTGCGG CTATCATTGGTACATTCCACAGCAATGGTGCGCATGCATTTTG G GCCATTGCCATACCGGCAACCGATACAGGACAATCGGATAGTGGCGTGGAAGTTCTGCCATCTGCTGCACAAGATACTGCGCGAGGGCCACCCGCTATGCTGTCAGCATTCCATGCGGCACCGGGCCATGCTGCTGGAGGCCGGAAAGCTGTGGGGCCATCTGAACGATGGGTATGGTATTTGCATCAAGCACTACACCAAGCTGCTCGTGACGAAGCTCGAGTTTCACGATCGCAACCCCCGCGTACCGGGCAGCTTATCGTTGCGCCAGGGCGATCTGGAAAAGATTGGCGAGGGAGACATTAACATTTATTTCCAGCTCGCAGTTGAGATATTCGACTATCTGGATGATATCATTGCGCTGCAAGGCACAATATTCAATTCCATCACAACGTTCTGCGTCAGTTCGATGACTTCGGCGGGACAGTGTCGTTTGGCACCGTTGATTCCATTGCATTCAAAACTCGAACCCACTGTACGATATGCTGGTGCGCGTGATGTTTAAACTGCACGCCAACTTACCCTCAGATCTGCTAACTGGGCATCGTCAGCGCTTCAACACACTGTTCCATCAGCTGAAATCGTTCTACGCACA ]
[+] EMBL CNS09P4Z [ AGTATTGATTCTGTGAAAGTGAAA AGTGAGGATCATCGAAGGTGGGATCCGAAAGTACCTACTATAGTGAATATTACTGCACGGAACCATTTGTAAAGCAAAGCATTTTTGACTGTAAAACATGTCGCTAACGGATAAGGAATACTATAATCTGACTATCAGTATTTCCAAAGCGCTCAGCAATGTGGAAATGCCCATCAAGGTGAAGCACGTCCGTGCGGTCTATCATTGGTACATTCCACAGCAATGGTGCGCATGCATTTTGTGTGCCATTGCCAT CCGGCAACCGATACAGGACAATCGGATAGTGGCGTGGAAGTTCTGCCATCTGCTGCACAAGATACTGCGCGAGGGCCACCCGCTATGCTGTCAGCATTCCATGCGGCACCGGGCCATGCTGCTGGAGGCCGGAAAGCTGTGGGGCCATCTGAACGATGGGTATGGTATTTGCATCAAGCACTACACCAAGCTGCTCGTGACGAAGCTCGAGTTTCACGATCGCAACCCCCGCGTACCGGGCAGCTTATCGTTGCGCCAGGGCGATCTGGAAAAGATTGGCGAGGGAGACATTAACATTTATTTCCAGCTCGCAGTTGAGATATTCGACTATCTGGATGATATCATTGCGCTGCAAGGCACAATATTCAATTCCATCACAACGTTCTGCGTCAGTTCGATGACTTCGGCGGGACAGTGTCGTTTGGCACCGTTGATTCC TTGCATTCAAGACTCGAACCCACTGTACGATATGCTGGTGCGCGTGATGTTTAAACTGCACGCCAACTTACCCTCAGATCTGCTGACTGGGCATCGTCAGCGCTTCAACACACTGTTCCATCAGCTGAAATCGTTCTACGGACAGTCGCGCAATCTGCAGTATTTTGTTAACCTGATCACCATGA]
[+] EMBL BM605328 [ ccgGGGCCACCCGCTATGCTGTCAGCATTCCATGCGGCACCGGGCCATGCTGCTGGAGGCCGGAAAGCTGTGGGGCCATCTGAACGATGGGTATGGTATTTGCATCAAGCACTACACCAAGCTGCTCGTGACGAAGCTCGAGTTTCACGATCGCAACCCCCGCGTGCCGGGCAGCTTATCGTTGCGCCAGGGCGATCTGGAAAAGATTGGCGAGGGAGACATTAACATTTATTTCCAGCTCGCAGTTGAGATATTCGACTATCTGGATGATATCATTGCGCTGCAAGGCACAATATTCAATTCCATCACAACGTTCTGCGTCAGTTCGATGACTTCGGCGGGACAGTGTCGTTTGGCACCGTTGATTCC TTGCATTCAAGACTCGAACCCACTGTACGATATGCTGGTGCGCGTGATGTTTAAACTGCACGCCAACTTACCCTCAGATCTGCTGACTGGGCATCGCCAGCGCTTCAACACACTGTTCCATCAGCTGAAATCGTTCTACGGACAGTCGCGCAATCTGCAGTATTTTGTTAACCTGAT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7584#0 AACCACGAGGTCCGAAAGCGATCACACAGTGAGGCGGTGCATCTTTTTCAGTTGGATATC 60
consensus_7584#1 ------------------------------------------------------------
consensus_7584#0 GTCACAGTACACATTTTGTGTGTAAAAATGTTCTACTAACAACAAGTGTGATGATGTTTC 120
consensus_7584#1 ----------------------------------------------------------CT 2
consensus_7584#0 GTTCGCTCGC--GAGCTAATAACATTCCAGTGGTGAAATCTGGTTCTAAAAATTGCAAAA 178
consensus_7584#1 GTTGGCCTACTGGAATTGGCAGTACGCCC-TGACCAGGCTCAGTATTGATT-CTGTGAAA 60
*** ** * ** * * * ** ** * ** * * ** ***
consensus_7584#0 GTGTACCAGTGTGCGT----GAAATTACCACACATGACGTACCTACTATAGTGAATATTA 234
consensus_7584#1 GTGAAACAGTGAGGATCATCGAAGGTGGGATCCG-AAAGTACCTACTATAGTGAATATTA 119
*** * ***** * * *** * * * * **********************
consensus_7584#0 CTGCACGGAACCATTTGTAAAGCAAAGCATTTTTGACTGTAAAACATGTCGCTAACGGAT 294
consensus_7584#1 CTGCACGGAACCATTTGTAAAGCAAAGCATTTTTAACTGTAAAACATGTCGCTAACGGAT 179
********************************** *************************
consensus_7584#0 AAGGAATACTATAATCTGACTATCAGTATTTCCAAAGCGCTCAGCAATGTGGAAATGCCC 354
consensus_7584#1 AAGGAATACTATAATCTGACTATCAGTATTTCCAAAGCGCTCAGCAATGTGGAAATGCCC 239
************************************************************
consensus_7584#0 ATCAAGGTGAAGCACGTCCGTGCGGCTATCATTGGTACATTCCACAGCAATGGTGCGCAT 414
consensus_7584#1 ATCAAGGTAAAAGACGTCCGTGCGGCTATCATTGGTACATTCCACAGCAATGGTGCGCAT 299
******** ** ***********************************************
consensus_7584#0 GCATTTTGGGCCATTGCCAT-CCGGCAACCGATACAGGACAATCGGATAGTGGCGTGGAA 473
consensus_7584#1 GCATTTTGGGCCATTGCCATACCGGCAACCGATACAGGACAATCGGATAGTGGCGTGGAA 359
******************** ***************************************
consensus_7584#0 GTTCTGCCATCTGCTGCACAAGATACTGCGCGAGGGCCACCCGCTATGCTGTCAGCATTC 533
consensus_7584#1 GTTCTGCCATCTGCTGCACAAGATACTGCGCGAGGGCCACCCGCTATGCTGTCAGCATTC 419
************************************************************
consensus_7584#0 CATGCGGCACCGGGCCATGCTGCTGGAGGCCGGAAAGCTGTGGGGCCATCTGAACGATGG 593
consensus_7584#1 CATGCGGCACCGGGCCATGCTGCTGGAGGCCGGAAAGCTGTGGGGCCATCTGAACGATGG 479
************************************************************
consensus_7584#0 GTATGGTATTTGCATCAAGCACTACACCAAGCTGCTCGTGACGAAGCTCGAGTTTCACGA 653
consensus_7584#1 GTATGGTATTTGCATCAAGCACTACACCAAGCTGCTCGTGACGAAGCTCGAGTTTCACGA 539
************************************************************
consensus_7584#0 TCGCAACCCCCGCGTACCGGGCAGCTTATCGTTGCGCCAGGGCGATCCGGAAAAGATTGG 713
consensus_7584#1 TCGCAACCCCCGCGTACCGGGCAGCTTATCGTTGCGCCAGGGCGATCTGGAAAAGATTGG 599
*********************************************** ************
consensus_7584#0 CGAGGGAGACATTAACATTTATTTCCAGCTCGCAGTTGAGATATTCGACTATCTGGATGA 773
consensus_7584#1 CGAGGGAGACATTAACATTTATTTCCAGCTCGCAGTTGAGATATTCGACTATCTGGATGA 659
************************************************************
consensus_7584#0 TATCATTGCGCTGCAAGGCACAATATTCAATTCCATCACAACGTTCTGCGTCAGTTCGAT 833
consensus_7584#1 TATCATTGCGCTGCAAGGCACAATATTCAATTCCATCACAACGTTCTGCGTCAGTTCGAT 719
************************************************************
consensus_7584#0 GACTTCGGCGGGACAGTGTCGTTTGGCACCGTTGATTCCTTGCATTCAAGACTCGAACCC 893
consensus_7584#1 GACTTCGGCGGGACAGTGTCGTTTGGCACCGTTGATTCCTTGCATTCAAGACTCGAACCC 779
************************************************************
consensus_7584#0 ACTGTACGATATGCTGGTGCGCGTGATGTTTAAACTGCACGCCAACTTACCCTCAGATCT 953
consensus_7584#1 ACTGTACGATATGCTGGTGCGCGTGATGTTTAAACTGCACGCCAACTTACCCTCAGATCT 839
************************************************************
consensus_7584#0 GCTGACTGGGCATCGTCAGCGCTTCAACACACTGTTCCATCAGCTGAAATCGTTCTACGG 1013
consensus_7584#1 GCTGACTGGGCATCGTCAGCGCTTCAACACACTGTTCCATCAGCTGAAATCGTTCTACGG 899
************************************************************
consensus_7584#0 ACAGTCGCGCAATCTGCAGTATTTTGTTAACCTGATCA------ 1051
consensus_7584#1 ACAGTCGCGCAATCTGCAGTATTTTGTTAACCTGATCACCATGA 943
**************************************
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||