cluster # 7603

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Anopheles gambiae
cluster # 7603 cluster # 7603 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7603#0 length = 1121 sequences # 6

consensus_7603#1 length = 441 sequences # 1

consensusID : consensus_7603#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1121
fasta sequence

                              [CCGCCCACGCGTCCGAAAAACGTGTTTACCGGACCAGGCGGCAGCGTAGCAATTGTTGGTAATTGTTGTTTTCCTCTGCGCGTATCGCCATGGATATCGTAAAGGAAGTGCTGCAGCAGCAGCAGCAGAATCTGCAAAAGTACAAACCGATCACGGTTGAGAAGGCGCTGGAACCGACGATCGATGTGGGCCACATGCTGGTGAGCGATCCGAACTACTACGACGAGGAACAGATGAAAGCGGACCGCGAAAAGTACGTGCTCGATTTGACGCGCGACAATGTGCAGCTTCTGATAAACAGCATCTGGCAGCTGCCGACGGAGCGGGTCGAGGAATCGATCGTTGCTAAGCTACCGCCGCCGAAGGCCCCGTTGCCGCGGGCCCGCAAGCTGCCCGTCCCGAAGCCGCTCACCAAATGGGAGGAGTTTGCCAAAAAGAAGGGCATCAAAAAGCGCACCCGCGACAAGAAGGTGTTCGACCCGGTGCTGGACAAATGGGTACCGACCTACGGCTACCAGCGGTACAAGGCCGAGAAGGAGAAGGACTGGGTGCTGGAGGTACCGCAGAACGATCCGTACC-GGGACATGTTCAAGGAGAAGCGCGATCTGCGCCTCGAGCGCGTGGCTAAGAATGAGGTGGCGCGCATGAAGAACATTGCCCGGGCGAAGAAAATCGCCACCCCGCGGACCGGTTTCGTCGGTCCCGAGACTGCATCCGCCAAACAGCTCATCACCGCGTCCAACATAGTGAAAGCGTCGACGGCCTCGGTGGGAGTGTTCCAGGAGTCGCTGCCGAACGAGAAGCAGGCGCGCGGCCTCGGTGTCAAGGAGCTGATGCCGGGCGAGAAGCGCAAGAAAAAGGTATCGAGCGTTGCCGGCGAAAAGCGGCGCAATCTGGAGATAGTGAATAAGGTGCTGAACAAGAAGCCGAAGATCGACATCGATCGGGCGATCTCGCTACAGAAGGCGGAAGCACGCGCAGAACGCGAAGCAGAGGAAGGCGGAGAGGACGGCGGAAGGACGAAGAAAAAGGGAGGCAAAAAGTCGAAAGCGTTCAGTCGCAAGAAACCGAAGGGTGGGCAAGGCAAGCGAAATCACAGCAAGCGGGCCGTTGGTCGGAAA]

[+] EMBL BM579462             [CCGCCCACGCGTCCGAAAAACGTGTTTACCGGACCAGGCGGCAGCGTAGCAATTGTTGGTAATTGTTGTTTTCCTCTGCGCGTATCGCCATGGATATCGTAAAGGAAGTGCTGCAGCAGCAGCAGCAGAATCTGCAAAAGTACAAACCGATCACGGTTGAGAAGGCGCTGGAACCGACGATCGATGTGGGCCACATGCTGGTGAGCGATCCGAACTACTACGACGAGGAACAGATGAAAGCGGACCGCGAAAAGTACGTGCTCGATTTGACGCGCGACAATGTGCAGCTTCTGATAAACAGCATCTGGCAGCTGCCGACGGAGCGGGTCGAGGAATCGATCGTTGCTAAGCTACCGCCGCCGAAGGCTCCGTTGCCGCGGGCCCGCAAGCTGCCCGTCCCGAAGCCGCTCACCAAATGGGAGGAGTTTGCCAAAAAGAAGGGCATCAAAAAGCGCACCCGTGACAAGAAGGTGTTCGACCCGGTGCTGGACAAATGGGTACCGACCTACGGCTACCAGCGGTACAAGGCCGAGAAGGAGAAGGACTGGGTGCTGGAGGTACCGCAGAACGATCCGTACCGGGGACATGTTCAAGGAGAAGCGCGATCTGCGCCTCGAGCGCGTGGCTAAGAATGAGGTGGCGCGCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX602904             [            tttAAAAACGTGTTTACCGGACCAGGCGGCAGCGTAGCAATTGTTGGTAATTGTTGTTTTCCTCTGCGCGTATCGCCATGGATATCGTAAAGGAAGTGCTGCAGCAGCAGCAGCAGAATCTGCAAAAGTACAAACCGATCACGGTTGAGAAGGCGCTGGAACCGACGATCGATGTGGGCCACATGCTGGTGAGCGATCCGAACTACTACGACGAGGAACAGATGAAAGCGGACCGCGAAAAGTACGTGCTCGATTTGACGCGCGACAATGTGCAGCTTCTGATAAACAGCATCTGGCAGCTGCCGACGGAGCGGGTCGAGGAATCGATCGTTGCTAAGCTACCGCCGCCGAAGGCCCCGTTGCCGCGGGCCCGCAAGCTGCCCGTCCCGAAGCCGCTCACCAAATGGGAGGAGTTTGCCAAAAAGAAGGGCATCAAAAAGCGCACCCGCGACAAGAAAGTGTTCGACCCGGTGCTGGACAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM644360             [                    ccgGTTTACCGGACCAGGCGGCAGCGTAGCAATTGTTGGCAATTGTTGTTTTCCTCTGCGCGTATCGCCATGGATATCGTAAAGGAAGTGCTGCAGCAGCAGCAGCAGAATCTGCAAAAGTACAAACCGATCACGGTTGAGAAGGCGCTGGAACCGACGATCGACGTGGGCCACATGCTGGTGAGCGATCCGAACTACTACGACGAGGAACAGATGAAAGCGGACCGCGAAAAGTACGTGCTCGATTTGACGCGCGACAATGTGCAGCTTCTGATAAACAGCATCTGGCAGCTGCCGACGGAGCGGGTCGAGGAATCGATCGTTGCTAAGCTACCGCCGCCGAAGGCCCCGTTGCCGCGGGCCCGCAAGCTGCCCGTCCCGAAGCCGCTCACCAAATGGGAGGAGTTTGCCAAAAAGAAGGGCATCAAAAAGCGCACCCGGGACAAGAAGGTGTTCGACCCGGTGCTGGACAAATGGGTACCGACCTACGGCTACCAGCGGTACAAGGCCGAGAAGGAGAAGGACTGGGTGCTGGAGGTACCGCAGAACGATCCGTACC GGGACATGTTCAAGGAGAAGCGCGATCTGCGCCTCGAGCGCGTGGCTAAGAATGAGGTGGCGCGCATGAAGAACATTGCCCGGGCGAAGAAAATCGCCACCCCGCGGACCG                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM590824             [                         ccgCCGGACCAGGCGGCAGCGTAGCAATTGTTGGTAATTGTTGTTTTCCTCTGCGCGTATCGCCATGGATATCGTAAAGGAAGTGCTGCAGCAGCAGCAGCAGAATCTGCAAAAGTACAAACCGATCACGGTTGAGAAGGCGCTGGAACCGACGATCGACGTGGGCCACATGCTGGTGAGCGATCCGAACTACTACGACGAGGAACAGATGAAAGCGGACCGCGAAAAGTACGTGCTCGATTTGACGCGCGACAATGTGCAGCTTCTGATAAACAGCATCTGGCAGCTGCCGACCGAGCGGGTCGAGGAATCGATCGTTGCTAAGCTACCGCCGCCGAAGGCCCCGTTGCCGCGGGCCCGCAAGCTGCCCGTCCCGAAGCCGCTCACCAAATGGGAGGAGTTTGCCAAAAAGAAGGGCATCAAAAAGCGCACCCGCGACAAGAAGGTGTTCGACCCGGTGCTGGACAAATGGGTACCGACCTACGGCTACCAGCGGTACAAGGCCGAGAAGGAGAAGGACTGGGTGCTGGAGGTACCGCAGAACGATCCGTACC GGGACATGTTCAAGGAGAAGCGCGATCTGCGCCTCGAGCGCGTGGCTAAGAATGAGGTGGCGCGCATGAAGAACATTGCCCGGGCGAAGACAATCGCCACCCCGCGGACCGGTTTCGTCGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM577781             [                                                                                                                                                                                           ccGCCACATGCTGGTGAGCGATCCGAACTACTACGACGAGGAACAGATGAAAGCGGACCGCGAAAAGTACGTGCTCGATTTGACGCGCGACAATGTGCAGCTTCTGATAAACAGCATCTGGCAGCTGCCGACGGAGCGGGTCGAGGAATCGATCGTTGCTAAGCTACCGCCGCCGAAGGCCCCGTTGCCGCGGGCCCGCAAGCTGCCCGTCCCGAAACCGCTCACCAAATGGGAGGAGTTTGCCAAAAAGAAGGGCATCAAAAAGCGCACCCGCGACAAGAAGGTGTTCGACCCGGTGCTGGACAAATGGGTACCGACCTACGGCTACCAGCGGTACAAGGCCGAGAAGGAGAAGGACTGGGTGCTGGAGGTACCGCAGAACGATCCGTACC GGGACATGTTCAAGGAGAAGCGCGATCTGCGCCTCGAGCGCGTGGCTAAGAATGAGGTGGCCCGCATGAAGAACATTGCCCGGGCGAAGAAAATCGCCACCCCGCGGACCGGTTTCGTCGGTCCCGAGACTGCATCCGCCAAACAGCTCATCACCGCGTCCAACATAGTGAAAGCGTCGACGGCCTCGGTGGGAGTGT                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM600404             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCGGCGGTACAAGGCCGAGAAGGAGAAGGACTGGGTGCTGGAGGTACCGCAGAACGATCCGTACC GGGACATGTTCAAGGAGAAGCGCGATCTGCGCCTCGAGCGCGTGGCTAAGAATGAGGTGGCGCGCATGAAGAACATTGCCCGGGCGAAGAAAATCGCCACCCCGCGGACCGGTTTCGTCGGTCCCGAGACTGCATCCGCCAAACAGCTCATCACCGCGTCCAACATAGTGAAAGCGTCGACGGCCTCGGTGGGAGTGTTCCAGGAGTCGCTGCCGAACGAGAAGCAGGCGCGCGGCCTCGGTGTCAAGGAGCTGATGCCGGGCGAGAAGCGCAAGAAAAAGGTATCGAGCGTTGCCGGCGAAAAGCGGCGCAATCTGGAGATAGTGAATAAGGTGCTGAACAAGAAGCCGAAGATCGACATCGATCGGGCGATCTCGCTACAGAAGGCGGAAGCACGCGCAGAACGCGAAGCAGAGGAAGGCGGAGAGGACGGCGGAAGGACGAAGAAAAAGGGAGGCAAAAAGTCGAAAGCGTTCAGTCGCAAGAAACCGAAGGGTGGGCAAGGCAAGCGAAATCACAGCAAGCGGGCCGTTGGTCGGAAA]




>consensus_7603#0
CCGCCCACGCGTCCGAAAAACGTGTTTACCGGACCAGGCGGCAGCGTAGCAATTGTTGGT
AATTGTTGTTTTCCTCTGCGCGTATCGCCATGGATATCGTAAAGGAAGTGCTGCAGCAGC
AGCAGCAGAATCTGCAAAAGTACAAACCGATCACGGTTGAGAAGGCGCTGGAACCGACGA
TCGATGTGGGCCACATGCTGGTGAGCGATCCGAACTACTACGACGAGGAACAGATGAAAG
CGGACCGCGAAAAGTACGTGCTCGATTTGACGCGCGACAATGTGCAGCTTCTGATAAACA
GCATCTGGCAGCTGCCGACGGAGCGGGTCGAGGAATCGATCGTTGCTAAGCTACCGCCGC
CGAAGGCCCCGTTGCCGCGGGCCCGCAAGCTGCCCGTCCCGAAGCCGCTCACCAAATGGG
AGGAGTTTGCCAAAAAGAAGGGCATCAAAAAGCGCACCCGCGACAAGAAGGTGTTCGACC
CGGTGCTGGACAAATGGGTACCGACCTACGGCTACCAGCGGTACAAGGCCGAGAAGGAGA
AGGACTGGGTGCTGGAGGTACCGCAGAACGATCCGTACCGGGACATGTTCAAGGAGAAGC
GCGATCTGCGCCTCGAGCGCGTGGCTAAGAATGAGGTGGCGCGCATGAAGAACATTGCCC
GGGCGAAGAAAATCGCCACCCCGCGGACCGGTTTCGTCGGTCCCGAGACTGCATCCGCCA
AACAGCTCATCACCGCGTCCAACATAGTGAAAGCGTCGACGGCCTCGGTGGGAGTGTTCC
AGGAGTCGCTGCCGAACGAGAAGCAGGCGCGCGGCCTCGGTGTCAAGGAGCTGATGCCGG
GCGAGAAGCGCAAGAAAAAGGTATCGAGCGTTGCCGGCGAAAAGCGGCGCAATCTGGAGA
TAGTGAATAAGGTGCTGAACAAGAAGCCGAAGATCGACATCGATCGGGCGATCTCGCTAC
AGAAGGCGGAAGCACGCGCAGAACGCGAAGCAGAGGAAGGCGGAGAGGACGGCGGAAGGA
CGAAGAAAAAGGGAGGCAAAAAGTCGAAAGCGTTCAGTCGCAAGAAACCGAAGGGTGGGC
AAGGCAAGCGAAATCACAGCAAGCGGGCCGTTGGTCGGAAA

consensusID : consensus_7603#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 441
fasta sequence

                              [GAATNGCCCGAGGCNGGTGCTGGACAAATNNGGTACCGACCTACGGCTACCAGCGGTACAAGGCCGAGAAGGAGAAGGACTGGGTGCTGGAGTGTACCTGCAGAACGATCCGTATCGGGACATGTTCAAGGAGAAGCGCGATCTGCGCCTCGAGCGCGTGGCTAAGAATGAGGTGGCGCGCATGAAGAACATTGCCCGGGCGAAGAAAATCGCCACCCCGCGGACCGGTTTCGTCGGTCCCGAGACTGCATCCGCCAAACAGCTCATCACCGCGTCCAACATAGTGAAAGCGTCGACGGCCTCGGTGGGAGTGTTCCAGGAGTCGCTGCCGAACGAGAAGCAGGCGCGCGGTCTCGGTGTCAAGGAGCTGATGCCGGGCGAGAAGCGCAAGAAAAAGGTATCGAGCGTTGCCGGCGAAAAGCGGCGCAATCTGGAGATAGT]

[+] EMBL AL932500             [GAATNGCCCGAGGCNGGTGCTGGACAAATNNGGTACCGACCTACGGCTACCAGCGGTACAAGGCCGAGAAGGAGAAGGACTGGGTGCTGGAGTGTACCTGCAGAACGATCCGTATCGGGACATGTTCAAGGAGAAGCGCGATCTGCGCCTCGAGCGCGTGGCTAAGAATGAGGTGGCGCGCATGAAGAACATTGCCCGGGCGAAGAAAATCGCCACCCCGCGGACCGGTTTCGTCGGTCCCGAGACTGCATCCGCCAAACAGCTCATCACCGCGTCCAACATAGTGAAAGCGTCGACGGCCTCGGTGGGAGTGTTCCAGGAGTCGCTGCCGAACGAGAAGCAGGCGCGCGGTCTCGGTGTCAAGGAGCTGATGCCGGGCGAGAAGCGCAAGAAAAAGGTATCGAGCGTTGCCGGCGAAAAGCGGCGCAATCTGGAGATAGT]




>consensus_7603#1
GAATNGCCCGAGGCNGGTGCTGGACAAATNNGGTACCGACCTACGGCTACCAGCGGTACA
AGGCCGAGAAGGAGAAGGACTGGGTGCTGGAGTGTACCTGCAGAACGATCCGTATCGGGA
CATGTTCAAGGAGAAGCGCGATCTGCGCCTCGAGCGCGTGGCTAAGAATGAGGTGGCGCG
CATGAAGAACATTGCCCGGGCGAAGAAAATCGCCACCCCGCGGACCGGTTTCGTCGGTCC
CGAGACTGCATCCGCCAAACAGCTCATCACCGCGTCCAACATAGTGAAAGCGTCGACGGC
CTCGGTGGGAGTGTTCCAGGAGTCGCTGCCGAACGAGAAGCAGGCGCGCGGTCTCGGTGT
CAAGGAGCTGATGCCGGGCGAGAAGCGCAAGAAAAAGGTATCGAGCGTTGCCGGCGAAAA
GCGGCGCAATCTGGAGATAGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7603#0      CCGCCCACGCGTCCGAAAAACGTGTTTACCGGACCAGGCGGCAGCGTAGCAATTGTTGGT 60
consensus_7603#1      ------------------------------------------------------------
                                                                                  

consensus_7603#0      AATTGTTGTTTTCCTCTGCGCGTATCGCCATGGATATCGTAAAGGAAGTGCTGCAGCAGC 120
consensus_7603#1      ------------------------------------------------------------
                                                                                  

consensus_7603#0      AGCAGCAGAATCTGCAAAAGTACAAACCGATCACGGTTGAGAAGGCGCTGGAACCGACGA 180
consensus_7603#1      ------------------------------------------------------------
                                                                                  

consensus_7603#0      TCGATGTGGGCCACATGCTGGTGAGCGATCCGAACTACTACGACGAGGAACAGATGAAAG 240
consensus_7603#1      ------------------------------------------------------------
                                                                                  

consensus_7603#0      CGGACCGCGAAAAGTACGTGCTCGATTTGACGCGCGACAATGTGCAGCTTCTGATAAACA 300
consensus_7603#1      ------------------------------------------------------------
                                                                                  

consensus_7603#0      GCATCTGGCAGCTGCCGACGGAGCGGGTCGAGGAATCGATCGTTGCTAAGCTACCGCCGC 360
consensus_7603#1      ------------------------------------------------------------
                                                                                  

consensus_7603#0      CGAAGGCCCCGTTGCCGCGGGCCCGCAAGCTGCCCGTCCCGAAGCCGCTCACCAAATGGG 420
consensus_7603#1      ------------------------------------------------------------
                                                                                  

consensus_7603#0      AGGAGTTTGCCAAAAAGAAGGGCATCAAAAAGCGCACCCGCGACAAGAAGGTGTTCGAC- 479
consensus_7603#1      -----------------------------------------------GAATNGCCCGAGG 13
                                                                      *   *  ***  

consensus_7603#0      CCGGTGCTGGACAAATGGG-TACCGACCTACGGCTACCAGCGGTACAAGGCCGAGAAGGA 538
consensus_7603#1      CNGGTGCTGGACAAATNNGGTACCGACCTACGGCTACCAGCGGTACAAGGCCGAGAAGGA 73
                      * **************  * ****************************************

consensus_7603#0      GAAGGACTGGGTGCTGGAG-GTACC-GCAGAACGATCCGTACCGGGACATGTTCAAGGAG 596
consensus_7603#1      GAAGGACTGGGTGCTGGAGTGTACCTGCAGAACGATCCGTATCGGGACATGTTCAAGGAG 133
                      ******************* ***** *************** ******************

consensus_7603#0      AAGCGCGATCTGCGCCTCGAGCGCGTGGCTAAGAATGAGGTGGCGCGCATGAAGAACATT 656
consensus_7603#1      AAGCGCGATCTGCGCCTCGAGCGCGTGGCTAAGAATGAGGTGGCGCGCATGAAGAACATT 193
                      ************************************************************

consensus_7603#0      GCCCGGGCGAAGAAAATCGCCACCCCGCGGACCGGTTTCGTCGGTCCCGAGACTGCATCC 716
consensus_7603#1      GCCCGGGCGAAGAAAATCGCCACCCCGCGGACCGGTTTCGTCGGTCCCGAGACTGCATCC 253
                      ************************************************************

consensus_7603#0      GCCAAACAGCTCATCACCGCGTCCAACATAGTGAAAGCGTCGACGGCCTCGGTGGGAGTG 776
consensus_7603#1      GCCAAACAGCTCATCACCGCGTCCAACATAGTGAAAGCGTCGACGGCCTCGGTGGGAGTG 313
                      ************************************************************

consensus_7603#0      TTCCAGGAGTCGCTGCCGAACGAGAAGCAGGCGCGCGGCCTCGGTGTCAAGGAGCTGATG 836
consensus_7603#1      TTCCAGGAGTCGCTGCCGAACGAGAAGCAGGCGCGCGGTCTCGGTGTCAAGGAGCTGATG 373
                      ************************************** *********************

consensus_7603#0      CCGGGCGAGAAGCGCAAGAAAAAGGTATCGAGCGTTGCCGGCGAAAAGCGGCGCAATCTG 896
consensus_7603#1      CCGGGCGAGAAGCGCAAGAAAAAGGTATCGAGCGTTGCCGGCGAAAAGCGGCGCAATCTG 433
                      ************************************************************

consensus_7603#0      GAGATAGTGAATAAGGTGCTGAACAAGAAGCCGAAGATCGACATCGATCGGGCGATCTCG 956
consensus_7603#1      GAGATAGT---------------------------------------------------- 441
                      ********                                                    

consensus_7603#0      CTACAGAAGGCGGAAGCACGCGCAGAACGCGAAGCAGAGGAAGGCGGAGAGGACGGCGGA 1016
consensus_7603#1      ------------------------------------------------------------
                                                                                  

consensus_7603#0      AGGACGAAGAAAAAGGGAGGCAAAAAGTCGAAAGCGTTCAGTCGCAAGAAACCGAAGGGT 1076
consensus_7603#1      ------------------------------------------------------------
                                                                                  

consensus_7603#0      GGGCAAGGCAAGCGAAATCACAGCAAGCGGGCCGTTGGTCGGAAA 1121
consensus_7603#1      ---------------------------------------------