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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7605#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2251 fasta sequence
[TAACCTAGAGAACAAGCATGCGCCCGCCGCAACCCCCTTTTTCTCTGATTTCGCGTCTTTCATGAATGCCTCACAATGCATATTACTCCATTCACGATCACTATTTATATTTCGAAAGTGTGTTATTATTGTGAGAGCCGCTTATTTTAACCACCAGACGCACCAGATTTCTTCGTACGTTCGTTCGGCGCACGCAATTGCAAAAACTAAACAAACACCACCACATGCCCGGGCCGCACACTTACAACGCGCGATATCCATCACTTACTTGCTAACTGATCATTTGCATTTGCTTTCTTACTTACAAACGGGCGTACACCACACTCCCCCTTCGTTCTTCGTCCTCTTTTTCGGGCCATCTGTTCCCTCATCTTTACTATTATTATCAATCCTACGGGCTGCTCCTCTACGATCGTTGCGGGTTTACCTGTGTTAATGGCTAATATTAGTGTATCTTCTTTTACAGTTTTACATAGCGCGATTCTGATTACTGTGTTTTACCCCC--CCTCTTCTTTTGTTATTATCAAACTCACGTGAGCTACTGCTACTGCTGCCGATTTTAAACTCGTGTGCTTCTCTCGTCGTTATACTACAGCCGAGCGACCGTTGGACCGCAATTTACACACAACCTTCATACATCCTTTCTTCGAAGTCGGGCCACAAATTATGATCAGAAACTGCCGTGTTACTTGCCGAGCGTATGTGTGTGGGTGCTCCTATTCTCCTACCAAACATTACCAGTTCTTTGTGATGATAGATGAACTCACCATTC----CTCTCTCTCTCGCGCGCGTGTGTTTAGCCTTATACGCGTTCTTGGGGAAGTGGAAAAGTCACCGCGAAACGATCGGATGGTTGGATTTCATGAAAGAAAGATTAAAATATGTTCACCAACAGGCAAACCAGTTCGTGTGTTGAATTATTTCAATTGCACTCGATATTGTGGTTGCTTTAATGAAGACTCAAAGTAAAATGCGGTACACCAAATGGTACAGATAGTCCAGGCCAATTTCTATTATTTCTCGCTCTTACGACCAGCTGCTACGGCGTGATGTGATGTACGTAATTCGGTTCGTGGTCGGTTTTGTAATGTTAGTGCTACACAAGCTTTGCTATCGATCGATCGAAGAAATTAACCAGCTCGAAGGTGGTGCATCATGCGACAGAAACGAATGTAAATCATAACACGTCAAATAAAATCGTGCCCGACATGGCGGCTATGTGGGATATTTCAGTATGGAGCGATCCGATGCATGCGGCCGTCGTGTTGGTGCGTACGTTGTAAACAAGCGTGAACAGAGTAGTGGGGGGAGGATACGTTGCAGAAAAGACGACGGGATGACGTTGACGACGTTTCTCGATTAGAAATTGAAGTAAGGCGCTAACTGAAGGATCAGACGTAGTCAATGTTGCTGTTGTTGAGCAAGTATATCGTCCACGCTAACGAACGCGCACGCACCGAGCGATGAGCTCGACATGAGGCGCAGCAGCTCGCAGGCGTGCGCTATGCACACCTCTAGCGGTGGTCGCCATGAGTAATTCATTGATTCTAATATGGCAGAGTTTAGAGCAGCACATACAGCTTCACGACGCGACGGGCACAGTTGCCACCCGAGCGGACTTGCCCATGGATTCGAATAGGCTAATAAACTAAATGCATCCTCTAACATTTTTTGATTAGTTTCATTAACACCATGTTCCTTCTCCAGTCGTTGGCTCATCTGGAACAGTTCGCGACCGAACTCTAGCATCCGCTCGACACCCGATTTTGCCGTGGCACTCGTCGATTTACAGTTTGGCGATAGCGATGAGTCCACGTCCATATCTTCATCCCGGCCGGTGTCCGCCTCTTCCTCTTCCTCTTCTACCAGTTCGTTCGTGTTCGTTCGATTGGCGGCACTGCCG-TTTTTGTAACCATTCGTGGCGCTATTATTGCTGTGGCCGTTCTCCATCTCGACGTCGTTCGAGTAGTCGTCTTCGATGCAGCTGCCATTATTGTTGTTGGTGTTATTACTGAGGACGTTATTTTTTAAGTATCCCTGATTGTCAGCATCATCCGGAATAATGGTGTTACCGTTTTGATAACTTTTTGTTGATTGTATCACCGATGTTTGCACGGGGCTCGTACGCGACGAAGGAGTACCTAGGTCAAAGTCAGATCCGTTCACCATCTCGATAAACTGTCGGCACTTTAGCATAAACAGCAGATTTTGATTCGACTCTAGCAGACCCGGATAGAGACGAATGGTCTGTT]
[-] EMBL BM654600 [TAACCTAGAGAACAAGCATGCGCCCGCCGCAACCCCCTTTTTCTCTGATTTCGCGTCTTTCATGAATGCCTCACAATGCATATTACTCCATTCACGATCACTATTTATATTTCGAAAGTGTGTTATTATTGTGAGAGCCGCTTATTTTAACCACCAGACGCACCAGATTTCTTCGTACGTTCGTTCGGCGCACGCAATTGCAAAAACTAAACAAACACCACCACATGCCCGG ]
[-] EMBL BX622191 [ CACCAGACGCACCAGATTTCTTCGTACGTTCGTTCGGCGCACGCAATTGCAAAAACTAAACAAACACCACCACATGCCGTCGCCGCACACTTACAACGCGCGATATCCATCACTTACTTGCTAACTGATCATTTGCATTTGCTTTCTTACTTACAAACGGGCGTACACCACACTCCCCCTTCGTTCTTCGTCCTCTTTTTCGGGCCATCTGTTCCCTCATCTTTACTATTATTATCAATCCTACGGGCTGCTCCTCTACGATCGTTGCGGGTTTACCTGTGTTAATGGCTAATATTAGTGTATCTTCTTTTACAGTTTTACATAGCGCGATTCTGATTACTGTGTTTTACCCCC CCTCTTCTTTTGTTATTATCAAACTCACGTGAGCTACTGCTACTGCTGCCGATTTTAAACTCGTGTGCTTCTCTCGTCGTTATACTACAGCCGAGCGACCGTTGGACCGCAATTTACACACAACCTTCATACATCCTTTCTTCGAAGTCGGGCCACAAATTATGATCAGAAACTGCCGTGTTACTTGCCGAGCGTATGTGTGTGGGTGCTCCTATTCTCCTACCAAACATTACCAGTTCTTTGTGATGATAGATGAACTCACCATTCCTCTCTCTCTCTCTCGCGCGCGTGTGTTTAGCCTTATACGCGTTCTTGGGGAAGTGGAAAAGTCACCGCGAAACGATCGGATGGTTGGATT ]
[-] EMBL BM603250 [ CATTTGCTTTCTTACTTACAAACGGGCGTACATCACCCTCCGCCTTCATCCTTCGTCCTCTTTTTCGGTCCATCTGTTCCCTCATCCTTACTATTATTATCAATCCTACGGGCTGCTCCTCTACGATCGTTGCGGGTTTACCTGTGTTAATGGCTAATATTAGTGTATCTTCTTTTACAGTTTTACATAGCGCGATTCTGATTACAGTGTTTTACCCCCCTCCTCTTCTTTTGTTATTATCAAACTCACGTGAGCTACTGCTACTGCTGCCGCTTTTAAACTCGTGTGCTTCTCTCGTCGTTATACTACAGCCGAGCGACCGTTGGACCGCAATTTACACACAACCTTCACACATCCTTTCTTCGAAATCGGGCCACAAATTATGATCAGAAACTGCCGTGTTACTTGCCGAGCGTATGTGTGTGGGTGCTCCTATTCTCCTACCAAACATTACCAGTTCTTTGTGATGATAGATGAACTCACCATTC CTCTCGCTCTCGCGCGCGTGTGTTTAGCCTTAGACGCGTTCTTGGGGAAGTGGAAAAGTCACCGCGAAACGATCGGATGGTTGGATTTCATGAAAGAAAGATTAAAATATGTTCACCAACAGGCAAACCAGTTCGTGTGTTGAATTATTTCAATTGCACTCGATATTGTGGTTGCTTTAATGAAGACTCAAAGTAAAATGCGG ]
[+] EMBL BM605110 [ TTCAATTGCACTCGATATTGTGGTTGCTTTAATGAAGACTCAAAGTAAAATGTTTTACACCAAATGGTACAGATAGTCCAGGCCAATTTCTATTATTTCTCGCTCTTACGACCAGCTGCTACGGCGTGATGTGATGTACGTAATTCGGTTCGTGGTCGGTTTTGTAATGTTAGTGCTACACAAGCTTTGCTATCGATCGATCGAAGAAATTAACCAGCTCGAAGGTGGTGCATCATGCGACAGAAACGAATGTAAATCATAACACGTCAAATAAAATCGTGCCCGACATGGCGGCTATGTGGGATATTTCAGTATGGAGCGATCCGATGCATGCGGCCGTCGTGTTGGTGCGTACGTTGTAAACAAGCGTGAACAGAGTAGTGGGGGGAGGATACGTTGCAGAAAAGACGACGGGATGACGTTGACGACGTTTCTCGATTAGAAATTGAAGTAAGGCGCTAACTGAAGGATCAGACGTAGTCAATGTTGCTGTTGTTGAGCAAGTATATCGTCCACGCTAACGAACGCGCACGCACCGAGCGATGAGCTCGACATGAGGCGCAGCAGCTCGCAGGCGTGCGCTATGCACACCTCTAGCGGTGGTCGCCATGAGTAATTCATTGATTCTAATATG ]
[-] EMBL BM633739 [ AGCAAGTATATCGTCCACGCTAACGAACGCGCACGCACCGAGCGATGAGCTCGACATGAGGCGCAGCAGCTCGCAGGCGTGCGCTATGCACACCTCTAGCGGTGGTCGCCATGAGTAATTCATTGATTCTAATATGGCAGAGTTTAGAGCAGCACATACAGCTTCACGACGCGACGGGCACAGTTGCCACCCGAGCGGACTTGCCCATGGATTCGAATAGGCTAATAAACTAAATGCATCCTCTAACATTTTTTGATTAGTTTCATTAACACCATGTTCCTTCTCCAGTCGTTGGCTCATCTGGAACAGTTCGCGACCGAACTCTAGCATCCGCTCGACACCCGATTTTGCCGTGGCACTCGTCGATTTACAGTTTGGCGATAGCGATGAGTCCACGTCCATATCTTCATCCCGGCCGGTGTCCGCCTCTTCCTCTTCCTCTTCTACCAGTTCGTTCGTGTTCGTTCGATTGGCGGCACTGCCG TTTTTGTAACCATTCGTGGCGCTATTATTGCTGTGGCCGTTCTCCATCTCGACGTCGTTCGAGTAGTCGTCTTCGATGCAGCTGCCATTATTGTTGTTGGTGTTATTACTGAGGACGTTATTTTTTAAGTATCCCTGATTGTCAGCATCATCCGGAATAATGGTGTTACCGTTTTGATAACTTTTTGTTGATTGTATCACCGATGTTTGCACGG ]
[+] EMBL CNS08Y2Q [ GTGCGCTATGCACACCTCTAGCGGTGGTCGCCATGAGTAATTCATTGATTCTAATATGGCAGAGTTTAGAGCAGCACATACAGCTTCACGACGCGACGGGCACAGTTGCCACCCGAGCGGACTTGCCCATGGATTCGAATAGGCTAATAAACTAAATGCATCCTCTAACATTTTTTGATTAGTTTCATTAAGACCATGTTCCTTCTCCAGTCGTTGGCTCATCTGGAACAGTTCGCGACCGAACTCTAGCATCCGCTCGACACCCGATTTTGCCGTGGCACTCGTCGATTTACAGTTTGGCGATAGCGATGAGTCCACGTCCATATCTTCATCCCGGCCGGTGTCCGCCTCTTCCTCTTCCTCTTCTACCAGTTCGTTCGTGTTCGTTCGATTGGCGGCACTGCCGTTTTTTGTAACCATTCGTGGCGCTATTATTGCTGTGGCCGTTCTCCATCTCGACGTCGTTCGAGTAGTCGTCTTCGATGCAGCTGCCATTATTGTTGTTGGTGTTATTACTGAGGACGTTATTTTTTAAGTATCCCTGATTGTCAGCATTATCCGGAATAATGGTGTTACCGTTTTGATAACTTTTTGTTGATTGTATCACCGATGTTTGCACTGGGCTCGTACGCGACGAAGGAGTACCTAGGTCAAAGTCAGATCCGTTCACCATCTCGATAAACTGTCGGCACTTTAGCATAAACAGCAGATTTTGATTCGACTCTAGCAGACCCGGATAGAGACGAATGGTCTGTT]
consensusID : consensus_7605#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence
[ACATACAGCTTCACGACGCGACGGGCACAGTTGCCACCCGAGCGGACTTGCCCATGGATTCGAATAGGCTAATAAACTAAATGCATCCTCTAACATTTTTTGATTAGTTTCATTAACACCATGTTCCTTCTCCAGTCGTTGGCTCATCTGGAACAGTTCGCGACCGAACTCTAGCATCCGCTCGACACCCGATTTTGCCGTGGCACTCGTCGATTTACAGTTTGGCGATAGCGATGAGTCCACGTCCATATCTTCATCCCGGCCGGTGTCCGCCTCTTCCTCTTCCTCTTCTACCAGTTCGTTCGTGTTCGTTCGATTGGCGGCACTGCCGTTTTTGTAACCATTCGTGGCGCTATTATTGCTGTGGCCGTTCTCCATCTCGACGTCGTTCGAGTAGTCGTCTTCGATGCAGCTGCCATTATTGTTGTTGGTGTTATTACTGAGGACGTTATTTTTTAAGTATCCCTGATTGTCAGCATTATCCGATAATGGTGTACCGTTTGATACTTNACTCGGGCGATC]
[-] EMBL AL932517 [ACATACAGCTTCACGACGCGACGGGCACAGTTGCCACCCGAGCGGACTTGCCCATGGATTCGAATAGGCTAATAAACTAAATGCATCCTCTAACATTTTTTGATTAGTTTCATTAACACCATGTTCCTTCTCCAGTCGTTGGCTCATCTGGAACAGTTCGCGACCGAACTCTAGCATCCGCTCGACACCCGATTTTGCCGTGGCACTCGTCGATTTACAGTTTGGCGATAGCGATGAGTCCACGTCCATATCTTCATCCCGGCCGGTGTCCGCCTCTTCCTCTTCCTCTTCTACCAGTTCGTTCGTGTTCGTTCGATTGGCGGCACTGCCGTTTTTGTAACCATTCGTGGCGCTATTATTGCTGTGGCCGTTCTCCATCTCGACGTCGTTCGAGTAGTCGTCTTCGATGCAGCTGCCATTATTGTTGTTGGTGTTATTACTGAGGACGTTATTTTTTAAGTATCCCTGATTGTCAGCATTATCCGATAATGGTGTACCGTTTGATACTTNACTCGGGCGATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7605#0 TAACCTAGAGAACAAGCATGCGCCCGCCGCAACCCCCTTTTTCTCTGATTTCGCGTCTTT 60
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 CATGAATGCCTCACAATGCATATTACTCCATTCACGATCACTATTTATATTTCGAAAGTG 120
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 TGTTATTATTGTGAGAGCCGCTTATTTTAACCACCAGACGCACCAGATTTCTTCGTACGT 180
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 TCGTTCGGCGCACGCAATTGCAAAAACTAAACAAACACCACCACATGCCCGGGCCGCACA 240
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 CTTACAACGCGCGATATCCATCACTTACTTGCTAACTGATCATTTGCATTTGCTTTCTTA 300
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 CTTACAAACGGGCGTACACCACACTCCCCCTTCGTTCTTCGTCCTCTTTTTCGGGCCATC 360
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 TGTTCCCTCATCTTTACTATTATTATCAATCCTACGGGCTGCTCCTCTACGATCGTTGCG 420
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 GGTTTACCTGTGTTAATGGCTAATATTAGTGTATCTTCTTTTACAGTTTTACATAGCGCG 480
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 ATTCTGATTACTGTGTTTTACCCCCCCTCTTCTTTTGTTATTATCAAACTCACGTGAGCT 540
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 ACTGCTACTGCTGCCGATTTTAAACTCGTGTGCTTCTCTCGTCGTTATACTACAGCCGAG 600
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 CGACCGTTGGACCGCAATTTACACACAACCTTCATACATCCTTTCTTCGAAGTCGGGCCA 660
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 CAAATTATGATCAGAAACTGCCGTGTTACTTGCCGAGCGTATGTGTGTGGGTGCTCCTAT 720
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 TCTCCTACCAAACATTACCAGTTCTTTGTGATGATAGATGAACTCACCATTCCTCTCTCT 780
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 CTCGCGCGCGTGTGTTTAGCCTTATACGCGTTCTTGGGGAAGTGGAAAAGTCACCGCGAA 840
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 ACGATCGGATGGTTGGATTTCATGAAAGAAAGATTAAAATATGTTCACCAACAGGCAAAC 900
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 CAGTTCGTGTGTTGAATTATTTCAATTGCACTCGATATTGTGGTTGCTTTAATGAAGACT 960
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 CAAAGTAAAATGCGGTACACCAAATGGTACAGATAGTCCAGGCCAATTTCTATTATTTCT 1020
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 CGCTCTTACGACCAGCTGCTACGGCGTGATGTGATGTACGTAATTCGGTTCGTGGTCGGT 1080
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 TTTGTAATGTTAGTGCTACACAAGCTTTGCTATCGATCGATCGAAGAAATTAACCAGCTC 1140
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 GAAGGTGGTGCATCATGCGACAGAAACGAATGTAAATCATAACACGTCAAATAAAATCGT 1200
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 GCCCGACATGGCGGCTATGTGGGATATTTCAGTATGGAGCGATCCGATGCATGCGGCCGT 1260
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 CGTGTTGGTGCGTACGTTGTAAACAAGCGTGAACAGAGTAGTGGGGGGAGGATACGTTGC 1320
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 AGAAAAGACGACGGGATGACGTTGACGACGTTTCTCGATTAGAAATTGAAGTAAGGCGCT 1380
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 AACTGAAGGATCAGACGTAGTCAATGTTGCTGTTGTTGAGCAAGTATATCGTCCACGCTA 1440
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 ACGAACGCGCACGCACCGAGCGATGAGCTCGACATGAGGCGCAGCAGCTCGCAGGCGTGC 1500
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 GCTATGCACACCTCTAGCGGTGGTCGCCATGAGTAATTCATTGATTCTAATATGGCAGAG 1560
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 TTTAGAGCAGCACATACAGCTTCACGACGCGACGGGCACAGTTGCCACCCGAGCGGACTT 1620
consensus_7605#1 -----------ACATACAGCTTCACGACGCGACGGGCACAGTTGCCACCCGAGCGGACTT 49
*************************************************
consensus_7605#0 GCCCATGGATTCGAATAGGCTAATAAACTAAATGCATCCTCTAACATTTTTTGATTAGTT 1680
consensus_7605#1 GCCCATGGATTCGAATAGGCTAATAAACTAAATGCATCCTCTAACATTTTTTGATTAGTT 109
************************************************************
consensus_7605#0 TCATTAACACCATGTTCCTTCTCCAGTCGTTGGCTCATCTGGAACAGTTCGCGACCGAAC 1740
consensus_7605#1 TCATTAACACCATGTTCCTTCTCCAGTCGTTGGCTCATCTGGAACAGTTCGCGACCGAAC 169
************************************************************
consensus_7605#0 TCTAGCATCCGCTCGACACCCGATTTTGCCGTGGCACTCGTCGATTTACAGTTTGGCGAT 1800
consensus_7605#1 TCTAGCATCCGCTCGACACCCGATTTTGCCGTGGCACTCGTCGATTTACAGTTTGGCGAT 229
************************************************************
consensus_7605#0 AGCGATGAGTCCACGTCCATATCTTCATCCCGGCCGGTGTCCGCCTCTTCCTCTTCCTCT 1860
consensus_7605#1 AGCGATGAGTCCACGTCCATATCTTCATCCCGGCCGGTGTCCGCCTCTTCCTCTTCCTCT 289
************************************************************
consensus_7605#0 TCTACCAGTTCGTTCGTGTTCGTTCGATTGGCGGCACTGCCGTTTTTGTAACCATTCGTG 1920
consensus_7605#1 TCTACCAGTTCGTTCGTGTTCGTTCGATTGGCGGCACTGCCGTTTTTGTAACCATTCGTG 349
************************************************************
consensus_7605#0 GCGCTATTATTGCTGTGGCCGTTCTCCATCTCGACGTCGTTCGAGTAGTCGTCTTCGATG 1980
consensus_7605#1 GCGCTATTATTGCTGTGGCCGTTCTCCATCTCGACGTCGTTCGAGTAGTCGTCTTCGATG 409
************************************************************
consensus_7605#0 CAGCTGCCATTATTGTTGTTGGTGTTATTACTGAGGACGTTATTTTTTAAGTATCCCTGA 2040
consensus_7605#1 CAGCTGCCATTATTGTTGTTGGTGTTATTACTGAGGACGTTATTTTTTAAGTATCCCTGA 469
************************************************************
consensus_7605#0 TTGTCAGCATCATCCGGAATAATGGTGTTACCGTTTTGATAACTTTTTGTTGATTGTATC 2100
consensus_7605#1 TTGTCAGCATTATCCG--ATAATGGTGT-ACCGTTT-GATA--CTTNACTCGGGCG-ATC 522
********** ***** ********** ******* **** ** * * * ***
consensus_7605#0 ACCGATGTTTGCACGGGGCTCGTACGCGACGAAGGAGTACCTAGGTCAAAGTCAGATCCG 2160
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 TTCACCATCTCGATAAACTGTCGGCACTTTAGCATAAACAGCAGATTTTGATTCGACTCT 2220
consensus_7605#1 ------------------------------------------------------------
consensus_7605#0 AGCAGACCCGGATAGAGACGAATGGTCTGTT 2251
consensus_7605#1 -------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||