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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7619#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1348 fasta sequence
[ACATTTTTTTAATTCTCGGACCGTTTTTCATCATATTG-GCGCGTACAGCGTGTATCGATAAATTCTTAAAATATTCCCATATAAGTACTCGCAAGTACCTGTTCTCGGTAAAAATTAGGCATAGTTCATTCCCCCCTCCCCTCCACCCTTCCTCAACCGTCCGTTGAACCGAA-GGACTGGCGTGGTCGAGTATGGAGCGCATGTTCCTGATGACACTCTCGTAGTGCGCCACCCGCTGCTCGAGCTTGCCGAGGGTGCCGAGAAAGTGCGCCTTCGGCATCTGCACGTACTCCTCGCCTTTGAAGATGAATTCGCTGATTTTGTCGTCCCGCTCCGTCGCCTGCTGGCCCCCTGCGCTGCTCTCCGCTGGCTCATCTTCCCGCCCTTCAACGGTTTCGTCGTGCGAGTTGGTGGATGACGAAACCGGAGATTTCACACTCTTGGAGGCGTTCGGCACCTCGCCGGAAGCTTCATCCGGCTTGCCCCCGTCCTCGTGGTCGTTGTCGACGATCGTCACTTCCGGGCCCGTTTCCGACTGTTTGTGCATGATGTTGCGGAATTGGATCGGCACCAGGCGTATCGTTTTGCCGTTCAGCACCACCCTCTTGCCGGCTGCCTCCCGGTGGTTGGGTGTGATCGCACCGGCAGCAGCGGCGTTCCGCACCTTCACCTTCATTTCCGCTATCTTCGAGGCGACCAGCTTCTGTTTGTGGCTGCTGCCGGCCGACGAAACAGCTTCCGACTTCGGTTCCTTCTGGGCGACTTTCTTCGAATCCGGCACCTCCTCCCCAACGCTTAGCGTATCCTGCAGCTCCTCGGAAGTGCTGGAGCGAACGACGGTCACCGTTGGGGAACTTAACGCTTCCGTGTCCGTCTCACTGGTCTGCTCCATGTCCGTCGACTCGGCGCCCCCGTTGTCGTCAAGCGGCCGCAAAGGTGCGACTTTCGCGAGCGTCCCGTCCGACTCCATCTCGTACACTTCGACCGTTCCCTCCGACGCGTCGCAATCCGTCACAATCGACTGGTCGAACGGGTAGGGCACCGCATTACCCAGCAGCAGCGTCCGTCGCTGGCTGCGGCACATATAGATGTCGGCAAAGTGGCGCTCGCACAGATACCGGTACCGCTTGTTCTCGAGCAGCTCGTGCGGCACGCCCGCAAACTTCATCCACGTCTCGTAGCGGTCGAACGGTTTCGGGAAGCCGAAGAATGTGATATCCGGAGTGGACACCGAGTTGTTGTTGCACCGGAAGTACGCACAGTGTTTGCGGTTCACGTTCGCCCGGTACGAGTGCATCTTGGGGTGTGTGTGGCCCCCCAATGCGTCCGTGCTGGTGCGTCGGTATGT]
[+] EMBL AGA284910 [ACATTTTTTTAATTCTCGGACCGTTTTTCATCATATTG GCGCGTACAGCGTGTATCGATAAATTCTTAAAATATTCCCATATAAGTACTCGCAAGTACCTGTTCTCGGTAAAAATTAGGCATAGTTCATTCCCCCCTCCCCTCCACCCTTCCTCAACCGTCCGTTGAACCGAAGGGACTGGCGTGGTCGAGTATGGATCGCATGTTCCTGATGACACTCTCGTAGTGCGCCAC ]
[+] EMBL CNS0935O [ CATTTTTTTAATTCTCGGACCGTTTTTCATCATATTGCGCGCGTACAGCGTGTATCGATAAATTCTTAAAATATTCCCATATAAGTACTCGCAAGTACCTGTTCTCGGTAAAAATTAGGCATAGTTCATTCCCCCCTCCCCTCCACCCTTCCTCAACCGTCCGTTGAACCGAA GGACTGGCGTGGTCGAGTATGGAGCGCATGTTCCTGATGACACTCTCGTAGTGCGCCACCCGCTGCTCGAGCTTGCCGAGGGTGCCGAGAAAGTGCGCCTTCGGCATCTGCACGTACTCCTCGCCTTTGAAGATGAATTCGCTGATTTTGTCGTCCCGCTCCGTCGCCTGCTGGCCCCCTGCGCTGCTCTCCGCTGGCTCATCTTCCCGCCCTTCAACGGTTTCGTCGTGCGAGTTGGTGGATGACGAAACCGGAGATTTCACACTCTTGGAGGCGTTCGGCACCTCGCCGGAAGCTTCATCCGGCTTGCCCCCGTCCTCGTGGTCGTTGTCGACGATCGTCACTTCCGGGCCCGTTTCCGACTGTTTGTGCATGATGTTGCGGAATTGGATCGGCACCAGGCGTATCGTTTTGCCGTTCAGCACCACCCTCTTGCCGGCTGCCTCCCGGTGGTTGGGTGTGATCGCACCGGCAGCAGCGGCGTTCCGCACCTTCACCTTCATTTCCGCTATCTTCGAGGCGACCAGCTTCTGTTTGTGGCTGCTGCCGGCCGACGAAACAGCTTCCGACTTCGGTTCCTTCTGGGCGACTTTCTTCGAATCCG ]
[+] EMBL CNS09IE0 [ CCCATATAAGTTCTCGCAAGTTCCTGTTCTCGGTAAAAATTAGGCATAGTTCATTCCCCCCTCCCCTCCACCCTTCCTCAACCGTCCGTTGAACCGAA GGACTGGCGTGGTCGATTATTGAGCtc ]
[-] EMBL AGA283620 [ CATGATGTTGCGGAATTGAATCGGCACCAGGCGTATCGTTTTGCCGTTCAGCACCACCCTCTTGCCGGCTGCCTCCCGGTGGTTGGGTGTGATCGCACCGGCAGCAGCGGCGTTCCGCACCTTCACCTTCATTTCCGCTATCTTCGAGGCGACCAGCTTCTGTTTGTGGCTGCTGCCGGCCGACGAAACAGCTTCCGACTTCGGTTCCTTCTGGGCGACTTTCTTCGAATCCGGCACCTCCTCCCCAACGCTTAGCGTATCCTGCAGCTCCTCGGAAGTGCTGGAGCGAACGACGGTCACCGTTGGGGAACTTAACGCTTCCGTGTCCGTCTCACTGGTCTGCTCCATGTCCGTCGACTCGGCGCCCCCGT ]
[-] EMBL CNS0935N [ GTGGTTGCGTGTGATCGCACCGGCAGCAGC GCGTTCCGCACCTTCACCTTCATTTCCGCTATCTTCGAGGCGACCAGCTTCTGTTTGTGGCTGCTGCCGGCCGACGAAACAGCTTCCGACTTCGGTTCCTTCTGGGCGACTTTCTTCGAATCCGGCACCTCCTCCCCAACGCTTAGCGTATCCTGCAGCTCCTCGGAAGTGCTGGAGCGAACGACGGTCACCGTTGGGGAACTTAACGCTTCCGTGTCCGTCTCACTGGTCTGCTCCATGTCCGTCGACTCGGCGCCCCCGTTGTCGTCAAGCGGCCGCAAAGGTGCGACTTTCGCGAGCGTCCCGTCCGACTCCATCTCGTACACTTCGACCGTTCCCTCCGACGCGTCGCAATCCGTCACAATCGACTGGTCGAACGGGTAGGGCACCGCATTACCCAGCAGCAGCGTCCGTCGCTGGCTGCGGCACATATAGATGTCGGCAAAGTGGCGCTCGCACAGATACCGGTACCGCTTGTTCTCGAGCAGCTCGTGCGGCACGCCCGCAAACTTCATCCACGTCTCGTAGCGGTCGAACGGTTTCGGGAAGCCGAAGAATGTGATATCCGGAGTGGACACCGAGTTGTTGTTGCACCGGAAGTACGCACAGTGTTTGCGGTTCACGTTCGCCCGGTACGAGTGCATCTTGGGGTGTGTGTGGCCCCCCAATGCGTCCGTGCTGGTGCGTCGGTATGT]
[-] EMBL CNS09IDZ [ CGAAGAATGTAATATCCGGAGTGGACACCGAGTTGATGTTGCACCGGAAGTACGCACAGTGTTTGCGGTTCACGTTCGCCCGGTACGAGTGCATCTTGGGGTGTGT ]
consensusID : consensus_7619#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 470 fasta sequence
[GTATCCTGCAGCTCCTCAGAAGTGCTAGAGCGAACGACGGTCACCGTTGGGGAGCTTAACGCTTCCGTGTCCGTCTCACTGGTCTGCTCCATGTCCGTCGACTCGGTGCCCTCGTTGTCGTCAAGCGGCCGCAAAGGTGCGACTTTCGCGAGCGTCCCATCCGACTCCATCTCGTACACTTCGACCGTTCCCTCCGACGCGTCGCAATCCGTCACAATCGACTGGTCGAACGGGTAGGGCACCGCATTACCCAGCAGCAGCGTCCGTCGCTGGCTGCGGCACATATAGATGTCGGCAAAGTGGCGCTCGCACAGATACCGGTACCGCTTGTTCTCGAGCAGCTCGTGCGGCACGCCCGCAAACTTCATCCACGTCTCGTAGCGGTCGAACGGTTTCGGGAAGCCGAAGAATGTGATATCCGGAGTGGACACCGAGTTGTTGTTGCACCGGAAGTANTGCCTCGTGCGGAT]
[-] EMBL BX466256 [GTATCCTGCAGCTCCTCAGAAGTGCTAGAGCGAACGACGGTCACCGTTGGGGAGCTTAACGCTTCCGTGTCCGTCTCACTGGTCTGCTCCATGTCCGTCGACTCGGTGCCCTCGTTGTCGTCAAGCGGCCGCAAAGGTGCGACTTTCGCGAGCGTCCCATCCGACTCCATCTCGTACACTTCGACCGTTCCCTCCGACGCGTCGCAATCCGTCACAATCGACTGGTCGAACGGGTAGGGCACCGCATTACCCAGCAGCAGCGTCCGTCGCTGGCTGCGGCACATATAGATGTCGGCAAAGTGGCGCTCGCACAGATACCGGTACCGCTTGTTCTCGAGCAGCTCGTGCGGCACGCCCGCAAACTTCATCCACGTCTCGTAGCGGTCGAACGGTTTCGGGAAGCCGAAGAATGTGATATCCGGAGTGGACACCGAGTTGTTGTTGCACCGGAAGTANTGCCTCGTGCGGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7619#0 ACATTTTTTTAATTCTCGGACCGTTTTTCATCATATTGGCGCGTACAGCGTGTATCGATA 60
consensus_7619#1 ------------------------------------------------------------
consensus_7619#0 AATTCTTAAAATATTCCCATATAAGTACTCGCAAGTACCTGTTCTCGGTAAAAATTAGGC 120
consensus_7619#1 ------------------------------------------------------------
consensus_7619#0 ATAGTTCATTCCCCCCTCCCCTCCACCCTTCCTCAACCGTCCGTTGAACCGAAGGACTGG 180
consensus_7619#1 ------------------------------------------------------------
consensus_7619#0 CGTGGTCGAGTATGGAGCGCATGTTCCTGATGACACTCTCGTAGTGCGCCACCCGCTGCT 240
consensus_7619#1 ------------------------------------------------------------
consensus_7619#0 CGAGCTTGCCGAGGGTGCCGAGAAAGTGCGCCTTCGGCATCTGCACGTACTCCTCGCCTT 300
consensus_7619#1 ------------------------------------------------------------
consensus_7619#0 TGAAGATGAATTCGCTGATTTTGTCGTCCCGCTCCGTCGCCTGCTGGCCCCCTGCGCTGC 360
consensus_7619#1 ------------------------------------------------------------
consensus_7619#0 TCTCCGCTGGCTCATCTTCCCGCCCTTCAACGGTTTCGTCGTGCGAGTTGGTGGATGACG 420
consensus_7619#1 ------------------------------------------------------------
consensus_7619#0 AAACCGGAGATTTCACACTCTTGGAGGCGTTCGGCACCTCGCCGGAAGCTTCATCCGGCT 480
consensus_7619#1 ------------------------------------------------------------
consensus_7619#0 TGCCCCCGTCCTCGTGGTCGTTGTCGACGATCGTCACTTCCGGGCCCGTTTCCGACTGTT 540
consensus_7619#1 ------------------------------------------------------------
consensus_7619#0 TGTGCATGATGTTGCGGAATTGGATCGGCACCAGGCGTATCGTTTTGCCGTTCAGCACCA 600
consensus_7619#1 ------------------------------------------------------------
consensus_7619#0 CCCTCTTGCCGGCTGCCTCCCGGTGGTTGGGTGTGATCGCACCGGCAGCAGCGGCGTTCC 660
consensus_7619#1 ------------------------------------------------------------
consensus_7619#0 GCACCTTCACCTTCATTTCCGCTATCTTCGAGGCGACCAGCTTCTGTTTGTGGCTGCTGC 720
consensus_7619#1 ------------------------------------------------------------
consensus_7619#0 CGGCCGACGAAACAGCTTCCGACTTCGGTTCCTTCTGGGCGACTTTCTTCGAATCCGGCA 780
consensus_7619#1 ------------------------------------------------------------
consensus_7619#0 CCTCCTCCCCAACGCTTAGCGTATCCTGCAGCTCCTCGGAAGTGCTGGAGCGAACGACGG 840
consensus_7619#1 --------------------GTATCCTGCAGCTCCTCAGAAGTGCTAGAGCGAACGACGG 40
***************** ******** *************
consensus_7619#0 TCACCGTTGGGGAACTTAACGCTTCCGTGTCCGTCTCACTGGTCTGCTCCATGTCCGTCG 900
consensus_7619#1 TCACCGTTGGGGAGCTTAACGCTTCCGTGTCCGTCTCACTGGTCTGCTCCATGTCCGTCG 100
************* **********************************************
consensus_7619#0 ACTCGGCGCCCCCGTTGTCGTCAAGCGGCCGCAAAGGTGCGACTTTCGCGAGCGTCCCGT 960
consensus_7619#1 ACTCGGTGCCCTCGTTGTCGTCAAGCGGCCGCAAAGGTGCGACTTTCGCGAGCGTCCCAT 160
****** **** ********************************************** *
consensus_7619#0 CCGACTCCATCTCGTACACTTCGACCGTTCCCTCCGACGCGTCGCAATCCGTCACAATCG 1020
consensus_7619#1 CCGACTCCATCTCGTACACTTCGACCGTTCCCTCCGACGCGTCGCAATCCGTCACAATCG 220
************************************************************
consensus_7619#0 ACTGGTCGAACGGGTAGGGCACCGCATTACCCAGCAGCAGCGTCCGTCGCTGGCTGCGGC 1080
consensus_7619#1 ACTGGTCGAACGGGTAGGGCACCGCATTACCCAGCAGCAGCGTCCGTCGCTGGCTGCGGC 280
************************************************************
consensus_7619#0 ACATATAGATGTCGGCAAAGTGGCGCTCGCACAGATACCGGTACCGCTTGTTCTCGAGCA 1140
consensus_7619#1 ACATATAGATGTCGGCAAAGTGGCGCTCGCACAGATACCGGTACCGCTTGTTCTCGAGCA 340
************************************************************
consensus_7619#0 GCTCGTGCGGCACGCCCGCAAACTTCATCCACGTCTCGTAGCGGTCGAACGGTTTCGGGA 1200
consensus_7619#1 GCTCGTGCGGCACGCCCGCAAACTTCATCCACGTCTCGTAGCGGTCGAACGGTTTCGGGA 400
************************************************************
consensus_7619#0 AGCCGAAGAATGTGATATCCGGAGTGGACACCGAGTTGTTGTTGCACCGGAAGTACGCAC 1260
consensus_7619#1 AGCCGAAGAATGTGATATCCGGAGTGGACACCGAGTTGTTGTTGCACCGGAAGTAN---T 457
*******************************************************
consensus_7619#0 AGTGTTTGCGGTTCACGTTCGCCCGGTACGAGTGCATCTTGGGGTGTGTGTGGCCCCCCA 1320
consensus_7619#1 GCCTCGTGCGGAT----------------------------------------------- 470
***** *
consensus_7619#0 ATGCGTCCGTGCTGGTGCGTCGGTATGT 1348
consensus_7619#1 ----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||