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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7626#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1151 fasta sequence
[CCGCCCACGCGTCCGGGAAATGCTGGCTTGAAGGATCAGCGCTTAGCACTTCAGTGGATTCGTCAGAACGTCAGCACATTTGGTGGTGATCCGAACAATGTCACACTGTTCGGTGCAAGCTCCGGTGGCAGCAACGTTCTGATGCATTGCTTTTCCGATCTCTCACAACCGTACTTCCACAAGGCGATCGCCCAGAGCGCCACCATCTTTGCGGATCTAATCTACCAAACGGAGCCGGAAGAGCGGGCCCGCTCGCTGGCACGCATCTTCGGCTACGAGGGCACCTCGGATGAGGGCGTCCTCGCGACGCTACGGGACGTCCCGGCGAGGCGTCTGTACGAAGCTCAGTTCTTGGTGCTTTCCGATCGCGAGCGTGAGTACGAACAGATCTTCCAGTTTCCCTTCACGGCCGTCATCGAGCGGGAACAGTCGACCGATCCGGTGCTGGTGAAAACGCCCATGGAATATCTGCGCGAGCCGAATCGAATGCGCGTGCCGGTGCTGTGTGGGTACAACGATAAGGAGGGCATGCTGGAGCTGGTGGATATGATCAAGAACCTGTCGGTGTACAACGCACGGCCGGAGAAGTTTATCTGCCGCTCGTTCGACGTCGATTACTTTAGTTCGGCCGCACGGGCACTGGGTGAAGAGATGAGGCGGCATTACTTTGGCGAAGCGTCGATTAGTCGTGCCAACCTGGACCGATTGGTCGATCTGCTTACCGATCGGTTCGTGGTCGGGTACTATGTGCTGTGCAAGCTGTGGAGCGAACATCAGCCAGCGACACCACTGTACTCGTACCGCTTCGCTTACGAGGGATCGCTCAACAAGGGCAAGGAGTTGCTCAAGTTTCAACACCTACCGGGCGCGTGTCATATCGATGAGGTGTACTACCTGTTCAGCTCACCGCTGCTGCGCACGGAGATCCCACCGTCCGATCCGGCTTACCGTATGCGGCAGCTAATGGTACGCATGTGGACAAACTTTGCAAAGCACTCGAACCCAACGCCACCGACGGAGCATGAACCCGGTCTTCCATGCCAGTGGGAACCGATGCGAGCGGTCCCGGGGACGGATGGACAGCCGACAAACTATACCGTGTTTTCGATAGGCAAGGAGCTAACGATGAGTACGCTGCCGGAGCTGGAGCG]
[+] EMBL BM608307 [CCGCCCACGCGTCCGGGAAATGCTGGCTTGAAGGATCAGCGCTTAGCACTTCAGTGGATTCGTCAGAACGTCAGCACATTTGGTGGTGATCCGAACAATGTCACACTGTTCGGTGCAAGCTCCGGTGGCAGCAACGTTCTGATGCATTGCTTTTCCGATCTCTCACAACCGTACTTCCACAAGGCGATCGCCCAGAGCGCCACCATCTTTGCGGATCTAATCTACCAAACGGAGCCGGAAGAGCGGGC ]
[+] EMBL BX607367 [ CAGCGCTTAGCACTTCAGTGGATCCGTCAGAACGTCAGCACATTTGGTGGCGATCCAAACAATGTCACACTGTTCGGTGCAAGCTCCGGTGGCAGCAACGTCCTGATGCATTGCTTTTCCGATCTCTCGCAACCGTACTTCCACAAGGCGATCGCCCAGAGCGCCACCATCTTTGCGGATCTAATCTACCAAACGGAGCCGGAAGAGCGGGCCCGCTCGCTGGCACGCATCTTCGGCTACGAGGGCACCTCGGATGAGGGCGTCCTCGCGACGCTACGGGACGTCCCGGCGAGGCGTCTGTACGAAGCTCAGTTCTTGGTGCTTTCCGATCGCGAGCGTGAGTACGAACAGATCTTCCAGTTTCCCTTCACGGCCGTCATCGAGCGGGAACAGTCGACCGATCCGGTGCTGGTGAAAACGCCCATGGAATATCTGCGCGAGCCGAATCGAATGCGCGTGCCGGTGCTGTGTGGGTACAACGATAAGGAGGGCATGCTGGAGCTGGTGGATATGATCAAGAACCTGTCGGTGTACAACGCACGGCCGGAGAAGTTTATCTGCCGCTCGTTCGACGTCGATTACTTTAGTTCGGCCGCACGGGCACTGGGTGAAGAGATGAGGCGGCATTACTTTGGCGAAGCGTCGATTAGTCGTGCCAACCTGGACCGATTGGTCGATCTGCTTACCGATCGGTTCGTGGTCGGGTACTATGTGCTGTGCAAGCTGTGGAGCGAACATCAGCCAGCGACACCACTGTACTCGTACCGCTTCGCTTACGAGGGATCGCTCAACAAGGG ]
[+] EMBL BX605515 [ ACCGTACTTCCACAAGGCGATCGCCCAGAGCGCTACCATCTTTGCGGATCTAATCTACCAAACGGAGCCGGAAGAGCGGGCCCGCTCGCTGGCACGTATCTTCGGCTACGAGGGCACCTCGGATGAGGGCGTCCTCGCGACGCTACGGGACGTCCCGGCAAGGCGTCTGTACGAAGCTCAGTTCCTGGTGCTTTCCGATCGCGAGCGCGAGTACGAACAGATCTTCCAGTTTCCCTTCACGGCCGTCATCGAGCGGGAACAGTCGACCGATCCGGTGCTGGTGAAAACGCCCATGGAATATCTGCGCGAGCCGAATCGAATGCGCGTGCCGGTGCTGTGTGGGTACAACGATAAGGAGGGCATGCTGGAGCTGGTGGATATGATAAAGAACCTGTCGGTGTACAACGCACGGCCGGAGAAGTTTATCTGCCGCTCGTTCGATGTCGATTACTTTAGTCCGGCCGCACGGGCGCTGGGTGAAGAGATGAGGCGGCATTACTTTGGCGAAGCGTCGATTAGTCGTGCCAACCTGGACCGATTGGTCGATCTGCTTACCGATCGGTTCGTGGTCGGGTACTATGTGCTGTGCAAGCTGTGGAGCGAACATCAGACAGCGACACCACTGTACTCGTAC ]
[+] EMBL BX606467 [ CACCATCTTTGCGGATCTAATCTACCAAACGGAGCCGGAAGAGCGGGCCCGCTCGCTGGCACGCATCTTCGGCTACGAGGGCACCTCGGATGAGGGCGTCCTCGCGACGCTACGGGACGTCCCGGCGAGGCGTCTGTACGAAGCTCAGTTCTTGGTGCTTTCCGATCGCGAGCGTGAGTACGAACAGATCTTCCAGTTTCCCTTCACGGCCGTCATCGAGCGGGAACAGTCGACCGATCCGGTGCTGGTGAAAACGCCCATGGAATATCTGCGCGAGCCGAATCGAATGCGCGTGCCGGTGCTGTGTGGGTACAACGATAAGGAGGGCATGCTG ]
[+] EMBL BX603175 [ GAAGCTCAGTTCTTGGTGCTTTCCGATCGCGAGCGTGAGTACGAACAGATCTTCCAGTTTCCCTTCACGGCCGTCATCGAGCGGGAACAGTCGACCGATCCGGTGCTGGTGAAAACGCCCATGGAATATCTGCGCGAGCCGAATCGAATGCGCGTGCCGGTGCTGTGTGGGTACAACGATAAGGAGGGCATGCTGGAGCTGGTGGATATGATCAAGAACCTGTCGGTGTACAACGCACGGCCGGAGAAGTTTATCTGCCGCTCGTTCGACGTCGATTACTTTAGTTCGGCCGCACGGGCACTGGGTGAAGAGATGAGGCGGCATTACTTTGGCGAAGCGTCGATTAGTCGTGCCAACCTGGACCGATTGGTCGATCTGCTTACCGATCGGTTCGTGGTCGGGTACTATGTGCTGTGCAAGCTGTGGAGCGAACATCAGCCAGCGACACCACTGTACTCGTACCGCTTCGCTTACGAGGGATCGCT ]
[+] EMBL BX628784 [ ATCCGGTGCTGGTGAAAACGCCCATGGAATATCTGCGCGAGCCGAATCGAATGCGCGTGCCGGTGCTGTGTGGGTACAACGATAAGGAGGGCATGCTGGAGCTGGTGGATATGATCAAGAACCTGTCGGTGTACAACGCACGGCCGGAGAAGTTTATCTGCCGCTCGTTCGACGTCGATTACTTTAGTTCGGCCGCACGGGCACTGGGTGAAGAGATGAGGCGGCATTACTTTGGCGAAGCGTCGATTAGTCGTGCCAACCTGGACCGATTGGTCGATCTGCTTACCGATCGGTTCGTGGTCGGGTACTATGTGCTGTGCAAGCTGTGGAGCGAACATCAGCCAGCGACACCACTGTACTCGTACCGCTTCGCTTACGAGGGATCGCTCAACAAGGGCAAGGAGTTGCTCAAGTTTCAACACCTACCGGGCGCGTGTCATATCGATGAGGTGTACTACCTGTTCAGCTCACCGCTGCTGCGCACGGAGATCCCACCGTCCGATCCGGCTTACCGTATGCGGCAGCTAATGGTACGCATGTGGACAAACTTTGCAAAGCACTCGAACCCAACGCCACCGACGGAGCATGAACCCGGTCTTCCATGCCAGTGGGAACCGATGCGAGCGGTCCCGGGGACGGATGGACAGCCGACAAACTATACCGTGTTTTCGATAGGCAAGGAGCTAACGATGAGTACGCTGCCGGAGCTGGAGCG]
consensusID : consensus_7626#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 648 fasta sequence
[CCGCCCACGCGTCCGACTATGTGCTGTGCAAGCTGTGGAGCGAACATCAGACAGCGACACCACTGTACTCGTACCGCTTCGCTTACGAGGGATCGCTCAACAAGGGCAAGGAGTTGCTCAAGTTTCAACACCTACCGGGCGCGTGTCATATCGATGAGGTGTACTATCTGTTCAGCTCACCGCTGCTGCGCACGGAGATCCCACCGTCCGATCCGGCTTACCGCATGCGGCAGCTAATGGTACGCATGTGGACAAACTTTGCAAAGCACTCGAACCCAACGCCACCGACGGAGGATGAACCCGGTCTTCCATGCCAGTGGGAACCGATGCGAACGGTCCCGGGGACGGAGGGACAGCCGACAAACTATACCGTGTTTTCGATAGGCAAGGAGCTAACGATGAGTACGCTGCCGGAGCTGGAGCGAATGGGCAAGTTCTTGGAGGTGACAAAACGGTGCAACGGTACGATCGATAACTTCGTCATACCGCGCATCGATTCTCGGCCAACAACCGGTGGGCGGGAAAGGCAGCAGTCGTTTGGTTAATGTTTGATTAATTTTGTACCGCGTTTGGACTTCCGCAATTGAAATGGTGTAATAAATTTATAATTAATACACAGTTCGTGGCCCGATGTGATGCAGTGGTTCA]
[+] EMBL BM653567 [CCGCCCACGCGTCCGACTATGTGCTGTGCAAGCTGTGGAGCGAACATCAGACAGCGACACCACTGTACTCGTACCGCTTCGCTTACGAGGGATCGCTCAACAAGGGCAAGGAGTTGCTCAAGTTTCAACACCTACCGGGCGCGTGTCATATCGATGAGGTGTACTATCTGTTCAGCTCACCGCTGCTGCGCACGGAGATCCCACCGTCCGATCCGGCTTACCGCATGCGGCAGCTAATGGTACGCATGTGGACAAACTTTGCAAAGCACTCGAACCCAACGCCACCGACGGAGGATGAACCCGGTCTTCCATGCCAGTGGGAACCGATGCGAACGGTCCCGGGGACGGAGGGACAGCCGACAAACTATACCGTGTTTTCGATAGGCAAGGAGCTAACGATGAGTACGCTGCCGGAGCTGGAGCGAATGGGCAAGTTCTTGGAGGTGACAAAACGGTGCAACGGTACGATCGATAACTTCGTCATACCGCGCATCGATTCTCGGCCAACAACCGGTGGGCGGGAAAGGCAGCAGTCGTTTGGTTAATGTTTGATTAATTTTGTACCGCGTTTGGACTTCCGCAATTGAAATGGTGTAATAAATTTATAATTAATACACAGTTCGTGGCCCGATGTGATGCAGTGGTTCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7626#0 CCGCCCACGCGTCCGGGAAATGCTGGCTTGAAGGATCAGCGCTTAGCACTTCAGTGGATT 60
consensus_7626#1 ------------------------------------------------------------
consensus_7626#0 CGTCAGAACGTCAGCACATTTGGTGGTGATCCGAACAATGTCACACTGTTCGGTGCAAGC 120
consensus_7626#1 ------------------------------------------------------------
consensus_7626#0 TCCGGTGGCAGCAACGTTCTGATGCATTGCTTTTCCGATCTCTCACAACCGTACTTCCAC 180
consensus_7626#1 ------------------------------------------------------------
consensus_7626#0 AAGGCGATCGCCCAGAGCGCCACCATCTTTGCGGATCTAATCTACCAAACGGAGCCGGAA 240
consensus_7626#1 ------------------------------------------------------------
consensus_7626#0 GAGCGGGCCCGCTCGCTGGCACGCATCTTCGGCTACGAGGGCACCTCGGATGAGGGCGTC 300
consensus_7626#1 ------------------------------------------------------------
consensus_7626#0 CTCGCGACGCTACGGGACGTCCCGGCGAGGCGTCTGTACGAAGCTCAGTTCTTGGTGCTT 360
consensus_7626#1 ------------------------------------------------------------
consensus_7626#0 TCCGATCGCGAGCGTGAGTACGAACAGATCTTCCAGTTTCCCTTCACGGCCGTCATCGAG 420
consensus_7626#1 ------------------------------------------------------------
consensus_7626#0 CGGGAACAGTCGACCGATCCGGTGCTGGTGAAAACGCCCATGGAATATCTGCGCGAGCCG 480
consensus_7626#1 ------------------------------------------------------------
consensus_7626#0 AATCGAATGCGCGTGCCGGTGCTGTGTGGGTACAACGATAAGGAGGGCATGCTGGAGCTG 540
consensus_7626#1 ------------------------------------------------------------
consensus_7626#0 GTGGATATGATCAAGAACCTGTCGGTGTACAACGCACGGCCGGAGAAGTTTATCTGCCGC 600
consensus_7626#1 ------------------------------------------------------------
consensus_7626#0 TCGTTCGACGTCGATTACTTTAGTTCGGCCGCACGGGCACTGGGTGAAGAGATGAGGCGG 660
consensus_7626#1 ------------------------------------------------------------
consensus_7626#0 CATTACTTTGGCGAAGCGTCGATTAGTCGTGCCAACCTGGACCGATTGGTCGATCTGCTT 720
consensus_7626#1 ------------------------------------------------------------
consensus_7626#0 ACCGATCGGTTCGTG-GTCGGGTACTATGTGCTGTGCAAGCTGTGGAGCGAACATCAGCC 779
consensus_7626#1 ------CCGCCCACGCGTCCG--ACTATGTGCTGTGCAAGCTGTGGAGCGAACATCAGAC 52
* * * * *** * *********************************** *
consensus_7626#0 AGCGACACCACTGTACTCGTACCGCTTCGCTTACGAGGGATCGCTCAACAAGGGCAAGGA 839
consensus_7626#1 AGCGACACCACTGTACTCGTACCGCTTCGCTTACGAGGGATCGCTCAACAAGGGCAAGGA 112
************************************************************
consensus_7626#0 GTTGCTCAAGTTTCAACACCTACCGGGCGCGTGTCATATCGATGAGGTGTACTACCTGTT 899
consensus_7626#1 GTTGCTCAAGTTTCAACACCTACCGGGCGCGTGTCATATCGATGAGGTGTACTATCTGTT 172
****************************************************** *****
consensus_7626#0 CAGCTCACCGCTGCTGCGCACGGAGATCCCACCGTCCGATCCGGCTTACCGTATGCGGCA 959
consensus_7626#1 CAGCTCACCGCTGCTGCGCACGGAGATCCCACCGTCCGATCCGGCTTACCGCATGCGGCA 232
*************************************************** ********
consensus_7626#0 GCTAATGGTACGCATGTGGACAAACTTTGCAAAGCACTCGAACCCAACGCCACCGACGGA 1019
consensus_7626#1 GCTAATGGTACGCATGTGGACAAACTTTGCAAAGCACTCGAACCCAACGCCACCGACGGA 292
************************************************************
consensus_7626#0 GCATGAACCCGGTCTTCCATGCCAGTGGGAACCGATGCGAGCGGTCCCGGGGACGGATGG 1079
consensus_7626#1 GGATGAACCCGGTCTTCCATGCCAGTGGGAACCGATGCGAACGGTCCCGGGGACGGAGGG 352
* ************************************** **************** **
consensus_7626#0 ACAGCCGACAAACTATACCGTGTTTTCGATAGGCAAGGAGCTAACGATGAGTACGCTGCC 1139
consensus_7626#1 ACAGCCGACAAACTATACCGTGTTTTCGATAGGCAAGGAGCTAACGATGAGTACGCTGCC 412
************************************************************
consensus_7626#0 GGAGCTGGAGCG------------------------------------------------ 1151
consensus_7626#1 GGAGCTGGAGCGAATGGGCAAGTTCTTGGAGGTGACAAAACGGTGCAACGGTACGATCGA 472
************
consensus_7626#0 ------------------------------------------------------------
consensus_7626#1 TAACTTCGTCATACCGCGCATCGATTCTCGGCCAACAACCGGTGGGCGGGAAAGGCAGCA 532
consensus_7626#0 ------------------------------------------------------------
consensus_7626#1 GTCGTTTGGTTAATGTTTGATTAATTTTGTACCGCGTTTGGACTTCCGCAATTGAAATGG 592
consensus_7626#0 --------------------------------------------------------
consensus_7626#1 TGTAATAAATTTATAATTAATACACAGTTCGTGGCCCGATGTGATGCAGTGGTTCA 648
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||