cluster # 7637

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Anopheles gambiae
cluster # 7637 cluster # 7637 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7637#0 length = 940 sequences # 6

consensus_7637#1 length = 704 sequences # 1

consensusID : consensus_7637#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 940
fasta sequence

                              [AATTCTCTCTGCCAACGCAATGGCTTTTACGGTTTAGTGCGGTTTAGTTTAGTAAATCAAATCAAATCAACTCGAATACAGTTTATCCATCGCTTCGTCAGCAGGCCAGCGGGCGGATAGCTCACGCGTTTAGTTTCGCCCCAGAACCGCACCAAGACGGTCACCCTTATTGAGCAGAAACCGCAGAACGTACGAAGCAGCAGATGGCCCCATCGGCAGTAAGCATGGTATTTACGGTGGAGAACGCCAAAACGGTTGGTGCGTTGGAAAAGGGACAGAAACCGCCTGGCGGGCATAGCTTCGACGAGGCGCTGGAGATGGCCGGATTCGGGCGGGTACAGATCGTCCTCTCGATTCTAGCCGGACTCGGCATGATGGCATCGATCAACGAAGCGATGGGCATGAGCATCATTCTCCCCGCCTCCCAGTGCGATCTCGATCTGGACGCTGGCGAGAAGGGTATAGTTGGAGGTGCTGTGTTTCTGGGTACAATGTGTTCGTCCTACTTCTGGGGCTATCTGGCTGATACGAGGGGCCGACAGCTGATCTTGAAGTACGCACTGTTTGCGACCTCGTTCTTCGGTGCGATCTCCTGTCTAGCGACTGGATTCACGTCGCTGCTGGTGCTCCGGTTTCTAACAGGTGTCTGTGTTGCTGCGCCTGCCTCTACGGTGTACGCTTATCTGGGCGAGTTCACCACCCCGAGCAGACGGAGTCAGATGCTGTCGTTTGCTTCCGTTTGGGGAGGTGTCGGAATCGTTTACGTATCATTGGTCGGTTGGTGGATACTCTCGTACGATTGGGTGTTGACTTTCTCCGACTCGTTTGAGTTTAAGCCATGGCGTTTGCTGTTTATCATCAACACGATGCCCGGCTTCTTGAATGGCATCGCATTCTGCTTCTGTCCCGAAAGTCCCAAATTTCTCGTCTCGCAAGGCCG]

[+] EMBL CNS08FR7             [AATTCTCTCTGCCAACGCAATGGCTTTTACGGTTTAGTGCGGTTTAGTTTAGTAAATCAAATCAAATCAACTCGAATACAGTTTATCCATCGCTTCGTCAGCAGGCCAGCGGGCGGATAGCTCACGCGTTTAGTTTCGCCCCAGAACCGCACCAAGACGGTCACCCTTATTGAGCAGAAACCGCAGAACGTACGAAGCAGCAGATGGCCCCATCGGCAGTAAGCATGGTATTTACGGTGGAGAACGCCAAAACGGTTGGTGCGTTGGAAAAGGGACAGAAACCGCCTGGCGGGCATAGCTTCGACGAGGCGCTGGAGATGGCCGGATTCGGGCGGGTACAGATCGTCCTCTCGATTCTAGCCGGACTCGGCATGATGGCATCGATCAACGAAGCGATGGGCATGAGCATCATTCTCCCCGCCTCCCAGTGCGATCTCGATCTGGACGCTGGCGAGAAGGGTATAGTTGGAGGTGCTGTGTTTCTGGGTACAATGTGTTCGTCCTACTTCTGGGGCTATCTGGCTGATACGAGGGGCCGACAGCTGATCTTGAAGTACGCACTGTTTGCGACCTCGTTCTTCGGTGCGATCTCCTGTCTAGCGACTGGATTCACGTCGCTGCTGGTGCTCCGGTTTCTAACAGGTGTCTGTGTTGCTGCGCCTGCCTCTACGGTGTACGCTTATCTGGGCGAGTTCACCACCCCGAGCAGACGGAGTCAGATGCTGTCGTTTGCTTCCGTTTGGGGAGGTGTCGGAATCGTTTACGTATCATTGGTCGGTTGGTGGATACTCTCGTACGATTGGGTGTTGACTTTCTCCGACTCGTTTGAGTTTAAGCCATGGCGTTTGCTGTTTATCATCAACATGATGCCCGGCTTCTTGAATGGCATCGCATTCTGCTTCTGTCCCGAAAGTCCCAAATTTCTCGTCTCGCAAGGCCG]
[+] EMBL BM630658             [                                                                                                                                                     ccgCAAGACGGTCACCCTTATTGAGCAGAAACCGCAAAACGTCCGAAGTAGCAGATGGCCCCATCGGCAGTAAGCATGGTATTTACGGTGGAG      AAAACGGTTGGTGCGTTGGAAAAGGGACAGAAACCGACGGGCGGGCATAGCTTTGACGAGGCGCTGGAGCTGGCCGGATTCGGGCGTGTACAGATCGTCCTCTCGATTCTAGCCGGACTCGGCATGATGGCATCGATCAACGAAGCGATGGGCATGAGCATCATTCTCCCCGCCTCTCAGTGCGATCTCGATCTGGACGCTGGCGAGAAGGGTATAGTTGGAGGTGCTGTGTTTCTAGGTACAATGTGTTCGTCCTACTTCTGGGGCTATCTGGCTGATACGAGGGGCCGACAGCTGATCTTGAAGTACGCACTGTTTGCGACCTCGTTCTTCGGTGCGATCTCCTGTCTGGCGACTGGATTCACGTCGCTGCTGGTGCTCCGGTTTCTAACAGGTGTCTGTGTTGCTGCGC                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM646762             [                                                                                                                                                                                              TACGAAGCAGCAGATGGCCCCATCGGCAGTAAGCATGGTATTTACGGTGGAGAACGCCAAAACGGTTGGTGCGTTGGAAAAGGGACAGAAACCGCCTGGCGGGCATAGCTTCGACGAGGCGCTGGAGATGGCCGGATTCGGGCGGGTACAGATCGTACTCTCGATTCTAGCCGGACTCGGCATGATGGCATCGATCAACGAAGCGATGGGCATGAGCATCATTCTCCCCGCCTCCCAGTGCGATCTCGATCTGGACGCTGGCGAGAAGGGTATAGTTGGAGGTGCTGTGTTTCTGGGTACAATGTGTTCGTCCTACTTCTGGGGCTATCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM646739             [                                                                                                                                                                                                                                  ccgATTTACGGTGGAGAACGCCAAAACGGTTGGTGCGTTGGAAAAGGGACAGAAACCGCCTGGCGGGCATAGCTTCGACGAGGCGCTGGAGATGGCCGGATTCGGGCGGGTACAGATCGTACTCTCGATTCTAGCCGGACTCGGCATGATGGCATCGATCAACGAAGCGATGGGCATGAGCATCATTCTCCCCGCCTCCCAGTGCGATCTCGATCTGGACGCTGGCGAGAAGGGTATAGTTGGAGGTGCTGTGTTTCTGGGTACAATGTGTTCGTCCTACTTCTGGGGCTATCTGGCTGATACGAGGGGCCGACAGCTGATCTTGAAGTACGCACTGTTTGCGACCTCGTTCTTCGGTGCGATCTCCTGTCTAGCGACTGGATTCACGTCGCTGCTGGTGCTCCGGTTTCTAACAGGTGTCTGTGTTGCTGCGCCTGCCTCTACGGTGTACGCTTATCTGGGCGAGTTCACCACCCCGAGCAGACGGAGTCAGATGCTGTCGTTTGCTTCCGTTTGGGGAGGTGTCGGAATCGTTTACGTATCATTGGTCGGTTGGTGGATACTCTCGTACGATTGGGTGTTGACTTTCTCCGACTCGTTTGAGTTTAAGCCATGGCGTTTGCTGTTTATCATCAACACGATGCCCGGCTTCTTGAATGGCATCGCATTCTGCTTCTGTCCCGA                              ]
[+] EMBL CNS08FTQ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGAGGTTTCGGAATCGTTTACGTATCATTGGTCGGTTGGTGGATACTCTCGTACGATTGGGTGTTGACTTTCTCCGACTCTTTTTAGTTTAA                                                                                                         ]
[+] EMBL BX606812             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GACTTTCTCCGACTCGTTTGAGTTTAAGCCATGGCGTTTGCTGTTTATCATCAACACGATGCCCGGCTTCTTGAATGGCATCACATTCTGCTTCTGTCACGAAAGTCCCA                      ]




>consensus_7637#0
AATTCTCTCTGCCAACGCAATGGCTTTTACGGTTTAGTGCGGTTTAGTTTAGTAAATCAA
ATCAAATCAACTCGAATACAGTTTATCCATCGCTTCGTCAGCAGGCCAGCGGGCGGATAG
CTCACGCGTTTAGTTTCGCCCCAGAACCGCACCAAGACGGTCACCCTTATTGAGCAGAAA
CCGCAGAACGTACGAAGCAGCAGATGGCCCCATCGGCAGTAAGCATGGTATTTACGGTGG
AGAACGCCAAAACGGTTGGTGCGTTGGAAAAGGGACAGAAACCGCCTGGCGGGCATAGCT
TCGACGAGGCGCTGGAGATGGCCGGATTCGGGCGGGTACAGATCGTCCTCTCGATTCTAG
CCGGACTCGGCATGATGGCATCGATCAACGAAGCGATGGGCATGAGCATCATTCTCCCCG
CCTCCCAGTGCGATCTCGATCTGGACGCTGGCGAGAAGGGTATAGTTGGAGGTGCTGTGT
TTCTGGGTACAATGTGTTCGTCCTACTTCTGGGGCTATCTGGCTGATACGAGGGGCCGAC
AGCTGATCTTGAAGTACGCACTGTTTGCGACCTCGTTCTTCGGTGCGATCTCCTGTCTAG
CGACTGGATTCACGTCGCTGCTGGTGCTCCGGTTTCTAACAGGTGTCTGTGTTGCTGCGC
CTGCCTCTACGGTGTACGCTTATCTGGGCGAGTTCACCACCCCGAGCAGACGGAGTCAGA
TGCTGTCGTTTGCTTCCGTTTGGGGAGGTGTCGGAATCGTTTACGTATCATTGGTCGGTT
GGTGGATACTCTCGTACGATTGGGTGTTGACTTTCTCCGACTCGTTTGAGTTTAAGCCAT
GGCGTTTGCTGTTTATCATCAACACGATGCCCGGCTTCTTGAATGGCATCGCATTCTGCT
TCTGTCCCGAAAGTCCCAAATTTCTCGTCTCGCAAGGCCG

consensusID : consensus_7637#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 704
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGCTCTCTGCCAACGCAATGGCTTTTACGGTTTAGTGCGGTTTAGTTTAGTAAATCAAATCAAATCAACTCGAATACAGTTTATCCATCGCTTCGTGTGTGTCCCGTATCCGTATGCAGTCGTTTGCAGTGTGCTTTTGTTGTGTTTCCTTCTCTTTCCTGATGCGACTTCGTTTCCAATTTTGCGATTTGGTGTGTTTTTTTTAAGCCACAGATGATCCTCGCTGTCTCTTCTGGGCTGATGGAAGGAACGGCAGGCCAGCGGGCGGATAGCTCACGCGTTCAGTTTCGCCCCAGAACCGCACCAAGACGGTCACCCTCATTGAGCAGAAACCGCAGAACGTACGAAGCAGCAGATGGCCCCATCGGCAGTAAGCATGGTATTTACGGTGGAGAACGCCAAAACGGTTGGTGCGTTGGAAAAGGGACAGAAACCGCCTGGCGGGCATAGCTTCGACGAGGCGCTGGAGATGGCCGGATTCGGGCGGGTACAGATCGTACTCTCGATTCTAGCCGGACTCGGCATGATGGCATCGATCAACGAAGCGATGGGCATGAGCATCATTCTCCCCGCCTCCCAGTGCGATCTCGATCTGGACGCTGGCGAGAAAGGTATAGTTGGAGGTGCTGTGTTTCTGGGGTACAATGTGTTCGTCCTACTTCTGGGGCTATCTGGCTGA]

[+] EMBL BM605001             [CCGCCCACGCGTCCGCCCACGCGTCCGCTCTCTGCCAACGCAATGGCTTTTACGGTTTAGTGCGGTTTAGTTTAGTAAATCAAATCAAATCAACTCGAATACAGTTTATCCATCGCTTCGTGTGTGTCCCGTATCCGTATGCAGTCGTTTGCAGTGTGCTTTTGTTGTGTTTCCTTCTCTTTCCTGATGCGACTTCGTTTCCAATTTTGCGATTTGGTGTGTTTTTTTTAAGCCACAGATGATCCTCGCTGTCTCTTCTGGGCTGATGGAAGGAACGGCAGGCCAGCGGGCGGATAGCTCACGCGTTCAGTTTCGCCCCAGAACCGCACCAAGACGGTCACCCTCATTGAGCAGAAACCGCAGAACGTACGAAGCAGCAGATGGCCCCATCGGCAGTAAGCATGGTATTTACGGTGGAGAACGCCAAAACGGTTGGTGCGTTGGAAAAGGGACAGAAACCGCCTGGCGGGCATAGCTTCGACGAGGCGCTGGAGATGGCCGGATTCGGGCGGGTACAGATCGTACTCTCGATTCTAGCCGGACTCGGCATGATGGCATCGATCAACGAAGCGATGGGCATGAGCATCATTCTCCCCGCCTCCCAGTGCGATCTCGATCTGGACGCTGGCGAGAAAGGTATAGTTGGAGGTGCTGTGTTTCTGGGGTACAATGTGTTCGTCCTACTTCTGGGGCTATCTGGCTGA]




>consensus_7637#1
CCGCCCACGCGTCCGCCCACGCGTCCGCTCTCTGCCAACGCAATGGCTTTTACGGTTTAG
TGCGGTTTAGTTTAGTAAATCAAATCAAATCAACTCGAATACAGTTTATCCATCGCTTCG
TGTGTGTCCCGTATCCGTATGCAGTCGTTTGCAGTGTGCTTTTGTTGTGTTTCCTTCTCT
TTCCTGATGCGACTTCGTTTCCAATTTTGCGATTTGGTGTGTTTTTTTTAAGCCACAGAT
GATCCTCGCTGTCTCTTCTGGGCTGATGGAAGGAACGGCAGGCCAGCGGGCGGATAGCTC
ACGCGTTCAGTTTCGCCCCAGAACCGCACCAAGACGGTCACCCTCATTGAGCAGAAACCG
CAGAACGTACGAAGCAGCAGATGGCCCCATCGGCAGTAAGCATGGTATTTACGGTGGAGA
ACGCCAAAACGGTTGGTGCGTTGGAAAAGGGACAGAAACCGCCTGGCGGGCATAGCTTCG
ACGAGGCGCTGGAGATGGCCGGATTCGGGCGGGTACAGATCGTACTCTCGATTCTAGCCG
GACTCGGCATGATGGCATCGATCAACGAAGCGATGGGCATGAGCATCATTCTCCCCGCCT
CCCAGTGCGATCTCGATCTGGACGCTGGCGAGAAAGGTATAGTTGGAGGTGCTGTGTTTC
TGGGGTACAATGTGTTCGTCCTACTTCTGGGGCTATCTGGCTGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7637#0      ------------------------------------------------------------
consensus_7637#1      CCGCCCACGCGTCCGCCCACGCGTCCGCTCTCTGCCAACGCAATGGCTTTTACGGTTTAG 60
                                                                                  

consensus_7637#0      ------------------------------------------------------------
consensus_7637#1      TGCGGTTTAGTTTAGTAAATCAAATCAAATCAACTCGAATACAGTTTATCCATCGCTTCG 120
                                                                                  

consensus_7637#0      ----------------------------------------------------AATTCTCT 8
consensus_7637#1      TGTGTGTCCCGTATCCGTATGCAGTCGTTTGCAGTGTGCTTTTGTTGTGTTTCCTTCTCT 180
                                                                            ******

consensus_7637#0      CTGCCAACGCAATGGCTTTTACGGTTTAGTGCGGTTTAGTTTAGTAAATCAAATC---AA 65
consensus_7637#1      TTCCTGATGCGACTTCGTTTCCAATTT--TGCGATTTGGTGTGTTTTTTTTAAGCCACAG 238
                       * *  * ** *   * *** *  ***  **** *** ** *  *   *  ** *   * 

consensus_7637#0      ATCAACTCGAATACAGTTTATCCATCGCTTCGT----CAGCAGGCCAGCGGGCGGATAGC 121
consensus_7637#1      ATGATCCTCGCTGTCTCTTCTGGGCTGATGGAAGGAACGGCAGGCCAGCGGGCGGATAGC 298
                      ** * *     *     ** *     * *        * *********************

consensus_7637#0      TCACGCGTTTAGTTTCGCCCCAGAACCGCACCAAGACGGTCACCCTTATTGAGCAGAAAC 181
consensus_7637#1      TCACGCGTTCAGTTTCGCCCCAGAACCGCACCAAGACGGTCACCCTCATTGAGCAGAAAC 358
                      ********* ************************************ *************

consensus_7637#0      CGCAGAACGTACGAAGCAGCAGATGGCCCCATCGGCAGTAAGCATGGTATTTACGGTGGA 241
consensus_7637#1      CGCAGAACGTACGAAGCAGCAGATGGCCCCATCGGCAGTAAGCATGGTATTTACGGTGGA 418
                      ************************************************************

consensus_7637#0      GAACGCCAAAACGGTTGGTGCGTTGGAAAAGGGACAGAAACCGCCTGGCGGGCATAGCTT 301
consensus_7637#1      GAACGCCAAAACGGTTGGTGCGTTGGAAAAGGGACAGAAACCGCCTGGCGGGCATAGCTT 478
                      ************************************************************

consensus_7637#0      CGACGAGGCGCTGGAGATGGCCGGATTCGGGCGGGTACAGATCGTCCTCTCGATTCTAGC 361
consensus_7637#1      CGACGAGGCGCTGGAGATGGCCGGATTCGGGCGGGTACAGATCGTACTCTCGATTCTAGC 538
                      ********************************************* **************

consensus_7637#0      CGGACTCGGCATGATGGCATCGATCAACGAAGCGATGGGCATGAGCATCATTCTCCCCGC 421
consensus_7637#1      CGGACTCGGCATGATGGCATCGATCAACGAAGCGATGGGCATGAGCATCATTCTCCCCGC 598
                      ************************************************************

consensus_7637#0      CTCCCAGTGCGATCTCGATCTGGACGCTGGCGAGAAGGGTATAGTTGGAGGTGCTGTGTT 481
consensus_7637#1      CTCCCAGTGCGATCTCGATCTGGACGCTGGCGAGAAAGGTATAGTTGGAGGTGCTGTGTT 658
                      ************************************ ***********************

consensus_7637#0      TCTGGG-TACAATGTGTTCGTCCTACTTCTGGGGCTATCTGGCTGATACGAGGGGCCGAC 540
consensus_7637#1      TCTGGGGTACAATGTGTTCGTCCTACTTCTGGGGCTATCTGGCTGA-------------- 704
                      ****** ***************************************              

consensus_7637#0      AGCTGATCTTGAAGTACGCACTGTTTGCGACCTCGTTCTTCGGTGCGATCTCCTGTCTAG 600
consensus_7637#1      ------------------------------------------------------------
                                                                                  

consensus_7637#0      CGACTGGATTCACGTCGCTGCTGGTGCTCCGGTTTCTAACAGGTGTCTGTGTTGCTGCGC 660
consensus_7637#1      ------------------------------------------------------------
                                                                                  

consensus_7637#0      CTGCCTCTACGGTGTACGCTTATCTGGGCGAGTTCACCACCCCGAGCAGACGGAGTCAGA 720
consensus_7637#1      ------------------------------------------------------------
                                                                                  

consensus_7637#0      TGCTGTCGTTTGCTTCCGTTTGGGGAGGTGTCGGAATCGTTTACGTATCATTGGTCGGTT 780
consensus_7637#1      ------------------------------------------------------------
                                                                                  

consensus_7637#0      GGTGGATACTCTCGTACGATTGGGTGTTGACTTTCTCCGACTCGTTTGAGTTTAAGCCAT 840
consensus_7637#1      ------------------------------------------------------------
                                                                                  

consensus_7637#0      GGCGTTTGCTGTTTATCATCAACACGATGCCCGGCTTCTTGAATGGCATCGCATTCTGCT 900
consensus_7637#1      ------------------------------------------------------------
                                                                                  

consensus_7637#0      TCTGTCCCGAAAGTCCCAAATTTCTCGTCTCGCAAGGCCG 940
consensus_7637#1      ----------------------------------------