cluster # 764

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 764 cluster # 764 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_764#0 length = 411 sequences # 1

consensus_764#1 length = 261 sequences # 1

consensusID : consensus_764#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 411
fasta sequence

                              [CCCAGGCTTTGCAGCCTACGGAGGCCGCTGTCTGGCGAGACGGGAAGGTGGATTAGGTGTTAAGTTCAACGCTGGTCAAATCGCAACAAGCGTGGATTAGGNGTNNTGTNCACTGTGCTCAAATCGAACAGATGCCGACGCGATCTTGATGTGGCCGGAACCGGCAAGATGCCGCCGGCATCTGCATTTCGCTCCGCANAGCGGGGCACATGTCGCAGGGGCCGGCAAAATCCGTTCCCGNGGAGGGAAAAGGCTCCACCCGGCGGGNACGGTCGAGCGNAACGATCGAGGAGCCGGAAGAGAGCGTACGCTGACATGGTCAGCCCGGTTGGATAAGTGGCGAACTGGACGCCACGCTCATCACCGGACGCACTCACCGGCAACAAACCTGCCGCATCATCGAGTCGCGGT]

[+] EMBL AL695901             [CCCAGGCTTTGCAGCCTACGGAGGCCGCTGTCTGGCGAGACGGGAAGGTGGATTAGGTGTTAAGTTCAACGCTGGTCAAATCGCAACAAGCGTGGATTAGGNGTNNTGTNCACTGTGCTCAAATCGAACAGATGCCGACGCGATCTTGATGTGGCCGGAACCGGCAAGATGCCGCCGGCATCTGCATTTCGCTCCGCANAGCGGGGCACATGTCGCAGGGGCCGGCAAAATCCGTTCCCGNGGAGGGAAAAGGCTCCACCCGGCGGGNACGGTCGAGCGNAACGATCGAGGAGCCGGAAGAGAGCGTACGCTGACATGGTCAGCCCGGTTGGATAAGTGGCGAACTGGACGCCACGCTCATCACCGGACGCACTCACCGGCAACAAACCTGCCGCATCATCGAGTCGCGGT]




>consensus_764#0
CCCAGGCTTTGCAGCCTACGGAGGCCGCTGTCTGGCGAGACGGGAAGGTGGATTAGGTGT
TAAGTTCAACGCTGGTCAAATCGCAACAAGCGTGGATTAGGNGTNNTGTNCACTGTGCTC
AAATCGAACAGATGCCGACGCGATCTTGATGTGGCCGGAACCGGCAAGATGCCGCCGGCA
TCTGCATTTCGCTCCGCANAGCGGGGCACATGTCGCAGGGGCCGGCAAAATCCGTTCCCG
NGGAGGGAAAAGGCTCCACCCGGCGGGNACGGTCGAGCGNAACGATCGAGGAGCCGGAAG
AGAGCGTACGCTGACATGGTCAGCCCGGTTGGATAAGTGGCGAACTGGACGCCACGCTCA
TCACCGGACGCACTCACCGGCAACAAACCTGCCGCATCATCGAGTCGCGGT

consensusID : consensus_764#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 261
fasta sequence

                              [CCGGAGGAAAGCTCCACCCGCGGCACGGTCGAGGCAACGATCGAGGAGCCGGAAGAGAGCGTACGCGACATGGTCAGCCGGTTGGAGAGTGGCAACGGCGCCACGCTCATCACCGGACGCACCACCGCCAACAAACCGCGCATCATCGAGTCGCGGTGCATCGAAAAGTACGAACCGGCCGAGCCGGCCATCACGATCAACAGCCAGACGACGGTTGACGGAGGGACGACGATTACCGCTGTCGGTTCAGTGGTCAGTGAG]

[+] EMBL AGA280968            [CCGGAGGAAAGCTCCACCCGCGGCACGGTCGAGGCAACGATCGAGGAGCCGGAAGAGAGCGTACGCGACATGGTCAGCCGGTTGGAGAGTGGCAACGGCGCCACGCTCATCACCGGACGCACCACCGCCAACAAACCGCGCATCATCGAGTCGCGGTGCATCGAAAAGTACGAACCGGCCGAGCCGGCCATCACGATCAACAGCCAGACGACGGTTGACGGAGGGACGACGATTACCGCTGTCGGTTCAGTGGTCAGTGAG]




>consensus_764#1
CCGGAGGAAAGCTCCACCCGCGGCACGGTCGAGGCAACGATCGAGGAGCCGGAAGAGAGC
GTACGCGACATGGTCAGCCGGTTGGAGAGTGGCAACGGCGCCACGCTCATCACCGGACGC
ACCACCGCCAACAAACCGCGCATCATCGAGTCGCGGTGCATCGAAAAGTACGAACCGGCC
GAGCCGGCCATCACGATCAACAGCCAGACGACGGTTGACGGAGGGACGACGATTACCGCT
GTCGGTTCAGTGGTCAGTGAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_764#0      CCCAGGCTTTGCAGCCTACGGAGGCCGCTGTCTGGCGAGACGGGAAGGTGGATTAGGTGT 60
consensus_764#1      ------------------------------------------------------------
                                                                                 

consensus_764#0      TAAGTTCAACGCTGGTCAAATCGCAACAAGCGTGGATTAGGNGTNNTGTNCACTGTGCTC 120
consensus_764#1      -----------CCGGAGGAAA-GCTCCACCCGCGGCACGGTCGAGGCAACGATCGAG--- 45
                                * **   **  **  **  ** **    *  *        *  * *   

consensus_764#0      AAATCGAACAGATGCCGACGCGATCTTGATGTGGCCGGAACCGGCAAGATGCCGCCGGCA 180
consensus_764#1      GAGCCGGAAGAGAGCGTACGCGA-CATGGT-CAGCCGGTTGGAGAGTGGCAACGGCGCCA 103
                      *  ** *     **  ****** * ** *   *****     *   *    ** ** **

consensus_764#0      TCTGCATTTCGCTCCGCANAGCGGGGCACATGTCGCAGGGGCCGGCAAAATCCGTTCCCG 240
consensus_764#1      CGCTCATCACCGGACGCACCACCGCCAACAAACCGC--------GCATCATCGAGTCGCG 155
                         ***  *    ****   * *   ***   ***        ***  ***   ** **

consensus_764#0      NGGAGGGAAAAGGCTCCACCCGGCGGGNACGGTCGAGCGNAACGATCGAGGAGCCGGAAG 300
consensus_764#1      GTGCATCGAAAAGTACGAACCGGCCGAGCCGGCCA----TCACGATC-AACAGCCAGACG 210
                       *     *** *  * * ***** *   *** *       ****** *  **** ** *

consensus_764#0      AGAGCGTACGCTGACATGG---TCAGCCCGGTTGGATAAGTGGCGAACTGGACGCCACGC 357
consensus_764#1      ACGGTTGACGGAGGGACGACGATTACCGCTGTCGGTTCAGTGGTCAGTGAG--------- 261
                     *  *   ***  *  * *    * * * * ** ** * *****  *    *         

consensus_764#0      TCATCACCGGACGCACTCACCGGCAACAAACCTGCCGCATCATCGAGTCGCGGT 411
consensus_764#1      ------------------------------------------------------