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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7644#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 823 fasta sequence
[GCAAGAATCGGCACGATGTGAGAGACAGAGGAGGTGTGAGACGAAGCAGTAAGACAGAGAGGAGAGAGAGAGAGGGTGTGTCGACGACTCCAACAACGCTCACAATGCCGGGTATGTTAGTGGCACACATGACCTTGGGTTTATTTTCTTTTATTTTTTTTTATTTTTGCCTTTTGCTCGTTATACATCTACATGGAGAGAAACCACAGGCGGAGAGAGAGAGAGAGAGAGCGACAATTAGCATAAACCAGTAGGGTAGGAAGAACAGAGGAGGACTTTCGATTCGGGCGGGGTAGAGTAGGAAGATAGGTGTAAGGTACAGATGATGAAAAAACTAATAGTTCCTGATTTTGTTTNTTTTGTTTNAGTATATTGGGGTTTGTTATGTAAACAAGGTCTAGAAGCCTAACGTGTTAAAAGCATATTAGCTTTTTAGGTTTAATTTTACGTATATAGAAAATATCCTATCGGATGCACACATCCGCCATTACAATTAGCGTAGGTNACGGCAACAGTTACTGCTTAGTGAATGATGTTNGCGTTGGATGTTGTGGACCAGTTATGGAGTTGATAATCGTGACCGGGTCGTTCGGCATTTGTGCGGGNGCGAGTCCCNAGGTGGCAAGATANAGTGCAAAGGCCAGGGANTGCCTNTAGGCCCTTTTGCCGTCTGGCNCGCAGAAGTTGGGCCCGANAGGGCACCGCCATTTTTGGGAAGCNGCCGTAAGGGCGGCCGTTTGNGGNGGGTTACTCGATCTCCAAGGGGGCCGAAGAGAACAGAACGGGGGCCCAGGGCGGNGGCAGTTTGAGAGNTGCCGGGAAG]
[+] EMBL BX468168 [GCAAGAATCGGCACGATGTGAGAGACAGAGGAGGTGTGAGACGAAGCAGTAAGACAGAGAGGAGAGAGAGAGAGGGTGTGTCGACGACTCCAACAACGCTCACAATGCCGGGTATGTTAGTGGCACACATGACCTTGGGTTTATTTTCTTTTATTTTTTTTTATTTTTGCCTTTTGCTCGTTATACATCTACATGGAGAGAAACCACAGGCGGAGAGAGAGAGAGAGAGAGCGACAATTAGCATAAACCAGTAGGGTAGGAAGAACAGAGGAGGACTTTCGATTCGGGCGGGGTAGAGTAGGAAGATAGGTGTAAGGTACAGATGATGAAAAAACTAATAGTTCCTGATTTTGTTTNTTTTGTTTNAGTATATTGGGGTTTGTTATGTAAACAAGGTCTAGAAGCCTAACGTGTTAAAAGCATATTAGCTTTTTAGGTTTAATTTTACGTATATAGAAAATATCCTATCGGATGCACACATCCGCCATTACAATTAGCGTAGGTNACGGCAACAGTTACTGCTTAGTGAATGATGTTNGCGTTGGATGTTGTGGACCAGTTATGGAGTTGATAATCGTGACCGGGTCGTTCGGCATTTGTGCGGGNGCGAGTCCCNAGGTGGCAAGATANAGTGCAAAGGCCAGGGANTGCCTNTAGGCCCTTTTGCCGTCTGGCNCGCAGAAGTTGGGCCCGANAGGGCACCGCCATTTTTGGGAAGCNGCCGTAAGGGCGGCCGTTTGNGGNGGGTTACTCGATCTCCAAGGGGGCCGAAGAGAACAGAACGGGGGCCCAGGGCGGNGGCAGTTTGAGAGNTGCCGGGAAG]
consensusID : consensus_7644#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 789 fasta sequence
[CCGGAGGAAGAAGATAAAAGAGAGAGACAGAGGAGGTGTGAGAGAAGCAGTAAGACAGAGAGGAGAGAGAGAGAGGGTGTGTCGACGACTCCAACAACGCTCACAATGCCGGGTATGTTAGTGGCACACATGACCTTGGGTTTATTTTCTTTTATTTTTTTTTATTTTTGCCTTTTGCTCGTTATACATCTACATGGAGAGAAACCACAGGCGGAGAGAGAGAGAGAGAGAGCGACAATTAGCATAAACCAGTAGGGTAGGAAGAACAGAGGAGGACTTTCGATTCGGGCGGGGTAGAGTAGGAAGATAGGTGTAAGGTACAGATGATGAAAAAACTAATAGTTCCTGATTTTTTTTTTTGTTTTTTTTGGGGTTTGTTTGTAAACAAGGTCTAGAAGCCTAACGTGTTAAAACATATTAGCTTTTTAGGTTTTTTTTTACGTATATAGAAAATATCCTATCGGATGCACACATCCGCCATTACAATTAGCGTAGGTTACGGCAACAGTTACTGCTTAGTGAATGATGTTTGCGTTTATTTTTGGACCAGTTTTGATTGATAATCGTGCCGGTGTTGGCATTGTGCGGGGCGATCCCAGTGGCAGTTGTGCAAGGCCGGATGCCTTTTTCCTTTCCTTGCAAATGCCAGCCCCTTGGACGCTAGCGCGTGGGGTTTTTCAGGCAGACGAGGCCAGCAGCATGATCGAAAGAAGTTTGCAAACGCTTTCCCTGCTCGCTAGCCGTTTTCTACTAAGTAGTACCTNCCTATAATCATTACTGCNAACTGCT]
[+] EMBL BM640665 [CCGGAGGAAGAAGATAAAAGAGAGAGACAGAGGAGGTGTGAGAGAAGCAGTAAGACAGAGAGGAGAGAGAGAGAGGGTGTGTCGACGACTCCAACAACGCTCACAATGCCGGGTATGTTAGTGGCACACATGACCTTGGGTTTATTTTCTTTTATTTTTTTTTATTTTTGCCTTTTGCTCGTTATACATCTACATGGAGAGAAACCACAGGCGGAGAGAGAGAGAGAGAGAGCGACAATTAGCATAAACCAGTAGGGTAGGAAGAACAGAGGAGGACTTTCGATTCGGGCGGGGTAGAGTAGGAAGATAGGTGTAAGGTACAGATGATGAAAAAACTAATAGTTCCTGATTTTTTTTTTTGTTTTTTTTGGGGTTTGTTTGTAAACAAGGTCTAGAAGCCTAACGTGTTAAAACATATTAGCTTTTTAGGTTTTTTTTTACGTATATAGAAAATATCCTATCGGATGCACACATCCGCCATTACAATTAGCGTAGGTTACGGCAACAGTTACTGCTTAGTGAATGATGTTTGCGTTTATTTTTGGACCAGTTTTGATTGATAATCGTGCCGGTGTTGGCATTGTGCGGGGCGATCCCAGTGGCAGTTGTGCAAGGCCGGATGCCTTTTTCCTTTCCTTGCAAATGCCAGCCCCTTGGACGCTAGCGCGTGGGGTTTTTCAGGCAGA ]
[+] EMBL BM637303 [ ccgAGAGAGAGACAGAGGAGGTGTGAGAGAAGCAGTAAGACAGAGAGGAGAGAGAGAGAGGGTGTGTCGACGACTCCAACAACGCTCACAATGCCGGGTATGTTAGTGGCACACATGACCTTGGGTTTATTTTCTTTTATTTTTTTTTATTTTTGCCTTTTGCTCGTTATACATCTACATGGAGAGAAACCACAGGCGGAGAGAGAGAGAGAGAGAGCGACAATTAGCATAAACCAGTAGGGTAGGAAGAACAGAGGAGGACTTTCGATTCGGGCGGGGTAGAGTAGGAAGATAGGTGTAAGGTACAGATGATGAAAAAACTAATAGTTCCTGATTTTTTTTTTTGTTTTTTTTGGGGTTTGTTTGTAAACAAGGTCTAGAAGCCTAACGTGTTAAAACATATTAGCTTTTTAGGTTTTTTTTTACGTATATAGAAAATATCCTATCGGATGCACACATCCGCCATTACAATTAGCGTAGGTTACGGCAACAGTTACTGCTTAGTGAATGATGTTTGCGTTTATTTTTGGACCAGTTTTGATTGATAATCGTGCCGGTGTTGGCATTGTGCGGGGCGATCCCAGTGGCAGTTGTGCAAGGCCGGATGCCTTTTTCCTTTCCTTGCAAATGCCAGCCCCTTGGACGCTAGCGCGTGGGGTTTTTCAGGCAGACGAGGCCAGCAGCATGATCGAAAGAA ]
[+] EMBL BM591515 [ ccgGAGAGACAGAGGAGGTGTGAGAGAAGCAGTAAGACAGAGAGGAGAGAGAGAGAGGGTGTGTCGACGACTCCGACAACGCTCACAATGCCGGGTATGTTAGTGGCACACATGACCTTGGGTTTATTTTCTTTTATTTTTTTTTATTTTTGCCTTTTGCTCGGTATACATCTACATGGAGAGAAACCACAGGCGGAGAGAGAGAGAGAGAGAGCGACAATTAGCATAAACCAGTAGGGTAGGAAGAACAGAGGAGGACTTTCAATTCGGGCGGGGTAGAGTAGGAAGATAGGTGTAAGGTACAGATGATGAAAAAACTAATAGTTCCTGATTTTTTTTTTTGTTTTTTTTGGGGTTTGTTTGGAAACAAGGTCTAGAAGCCTAACGTGTTAAAACATATTAGCTTTTTAGGTTTTTTTTTACGTATATAGAAAATATCCTATCGGATGCACACATCCGCCATTACAATTAGCGTAAGTTACGGCAACAGTTACTGCTTAGTGAATGATGTTTGCGTTTATTTTTGGACCAGTTTTGATTGATAATCGTGCCGGTGTTGGCATTGTGCGGGGCGATCCCAGTGGCAATTGTGCAAGGCCGGATGCCTTTTTCCTTTCCTTGCAAATGC ]
[+] EMBL BM608889 [ ccgGAGAGACAGAGGAGGTGTGAGAGAAGCAGTAAGACAGAGAGGAGAGAGAGAGAGGGTGTGTCGACGACTCCAACAACGCTCACAATGCCGGGTATGTTAGTGGCACACATGACCTTGGGTTTATTTTCTTTTATTTTTTTTTATTTTTGCCTTTTGCTCGTTATACATCTACATGGAGAGAAACCACAGGCGGAGAGAGAGAGAGAGAGAGCGACAATTAGCATAAACCAGTAGGGTAGGAAGAACAGAGGAGGACTTTCGATTCGGGCGGGGTAGAGTAGGAAGATAGGTGTAAGGTACAGATGATGAAAAAACTAATAGTTCCTGATTTTTTTTTTTGTTTTTTTTGGGGTTTGTTTGTAAACAAGGTCTAGAAGCCTAACGTGTTAAAACATATTAGCTTTTTAGGTTTTTTTTTACGTATATAGAAAATATCCTATCGGATGCACACATCCGCCATTACAATTAGCGTAGGTTACGGCAACAGTTACTGCTTAGTGAATGATGTTTGCGTTTATTTTTGGACCAGTTTTGATTGATAATCGTGCCGGTGTTGGCATTGTGCGGGGCGA ]
[+] EMBL BX623151 [ AGAGGAGAGAGAGAGAGGGTGTGTCGACGACTCCAACAACGCTCACAATGCCGGGTATGTTAGTGGCACACATGACCTTGGGTTTATTTTCTTTTATTTTTTTTTATTTTTGCCTTTTGCTCGTTATACATCTACATGGAGAGAAACCACAGGCGGAGAGAGATAGAGAGAGAGCGACAATTAGCATAAACCAGTAGGGTAGGAAGAACAGAGGAGGACTTTCGATTCGGGCGGGGTAGAGTAGGAAGATAGGTGTAAGGTACAGATGATGAAAAAACTAATAGTTCCTGATTTTTTTTTTTGTTTTTTTTGGGGTTTGTTTGTAAACAAGGTCTAGAAGCCTAACGTGTTAAAACATATTAGCTTTTTAGGTTTTTTTTTACGTATATAGAAAATATCCTATCGGATGCACACATCCGCCATTACAATTAGCGTAGGTTACGGCAACAGTTACTGCTTAGTGAATGATGTTTGCGTTTATTTTTGGACCAGTTTTGATTGATAATCGTGCCGGTGTTGGCATTGTGCGGGGCGATCCCAGTGGCAGTTGTGCAAGGCCGGATGCCTTTTTCCTTTCCTTGCAAATGCCAGCCCCTTGGACGCTAGCGCGTGGGGTTTTTCAGGCAGACGAGGNCAGCAGCATGATCGAAAGAAGTTTGCAAACGCTTTCCCTGCTCGCTAGCCGTTTTCTACTAAGTAGTACCTNCCTATAATCATTACTGCNAACTGCT]
[+] EMBL BX624934 [ CGACGACTCCAACAACGCTCACAATGCCGGGTATGTTAGTGGCACACATGACCTTGGGTTTATTTTCTTTTATTTTTTTTTATTTTTGCCTTTTGCTCGTTATACATCTACATGGAGAGAAACCACAGGCGGAGAGAGAGAGAGAGAGAGCGACAATTAGCATAAACCAGTAGGGTAGGAAGAACAGAGGAGGACTTTCGATTCGGGCGGGGTAGAGTAGGAAGATAGGTGTAAGGTACAGATGATGAAAAAACTAATAGTTCCTGA TTTTTTTTTTGTTTTTTTTGGGGTTTGTTTGTAAACAAGGTCTAGAAGCCTAACGTGTTAAAACATATTAGCTTTTTAGGTTTTTTTTTACGTATATAGAAAATATCCTATCGGATGCACACATCCGCCATTACAATTAGCGTAGGTTACGGCAACAGTTACTGCTTAGTGAATGATGTTTGCGTTTATTTTTGGACCAGTTTTGATTGATAATCGTGCCGGTGTTGGCATTGTGCGGGGCGATCCCAGTGGCAGTTGTGCAAGGCCGGATGCCTTTTTCCTTTCCTTGCAAATGCCAGCCCCTTGGACGCTAGCGCGTGGGGTTTTT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7644#0 --GCAAGAATCGGCACGATGTGAGAGACAGAGGAGGTGTGAGACGAAGCAGTAAGACAGA 58
consensus_7644#1 CCGGAGGAAGAAGATAAAAGAGAGAGACAGAGGAGGTGTGAGA-GAAGCAGTAAGACAGA 59
* * *** * * * ********************** ****************
consensus_7644#0 GAGGAGAGAGAGAGAGGGTGTGTCGACGACTCCAACAACGCTCACAATGCCGGGTATGTT 118
consensus_7644#1 GAGGAGAGAGAGAGAGGGTGTGTCGACGACTCCAACAACGCTCACAATGCCGGGTATGTT 119
************************************************************
consensus_7644#0 AGTGGCACACATGACCTTGGGTTTATTTTCTTTTATTTTTTTTTATTTTTGCCTTTTGCT 178
consensus_7644#1 AGTGGCACACATGACCTTGGGTTTATTTTCTTTTATTTTTTTTTATTTTTGCCTTTTGCT 179
************************************************************
consensus_7644#0 CGTTATACATCTACATGGAGAGAAACCACAGGCGGAGAGAGAGAGAGAGAGAGCGACAAT 238
consensus_7644#1 CGTTATACATCTACATGGAGAGAAACCACAGGCGGAGAGAGAGAGAGAGAGAGCGACAAT 239
************************************************************
consensus_7644#0 TAGCATAAACCAGTAGGGTAGGAAGAACAGAGGAGGACTTTCGATTCGGGCGGGGTAGAG 298
consensus_7644#1 TAGCATAAACCAGTAGGGTAGGAAGAACAGAGGAGGACTTTCGATTCGGGCGGGGTAGAG 299
************************************************************
consensus_7644#0 TAGGAAGATAGGTGTAAGGTACAGATGATGAAAAAACTAATAGTTCCTGATTTTGTTTNT 358
consensus_7644#1 TAGGAAGATAGGTGTAAGGTACAGATGATGAAAAAACTAATAGTTCCTGATTTT--TTTT 357
****************************************************** ** *
consensus_7644#0 TTTGTTTNAGTATATTGGGGTTTGTTATGTAAACAAGGTCTAGAAGCCTAACGTGTTAAA 418
consensus_7644#1 TTTGTTTT----TTTTGGGGTTTGTT-TGTAAACAAGGTCTAGAAGCCTAACGTGTTAAA 412
******* * ************ *********************************
consensus_7644#0 AGCATATTAGCTTTTTAGGTTTAATTTTACGTATATAGAAAATATCCTATCGGATGCACA 478
consensus_7644#1 A-CATATTAGCTTTTTAGGTTTTTTTTTACGTATATAGAAAATATCCTATCGGATGCACA 471
* ******************** ************************************
consensus_7644#0 CATCCGCCATTACAATTAGCGTAGGTNACGGCAACAGTTACTGCTTAGTGAATGATGTTN 538
consensus_7644#1 CATCCGCCATTACAATTAGCGTAGGTTACGGCAACAGTTACTGCTTAGTGAATGATGTTT 531
************************** ********************************
consensus_7644#0 GCGTTGGATGTTGTGGACCAGTTATGGAGTTGATAATCGTGACCGGGTCGTTCGGCATTT 598
consensus_7644#1 GCGTTTATTTTTG--GACCAGTTTTGA--TTGATAATCGTGCCGGTGT----TGGCATT- 582
***** * *** ******** ** ************ * * ** ******
consensus_7644#0 GTGCGGGNGCGAGTCCCNAGGTGGCAAGATANAGTGCAAAGGCCAGGGANTGCCTNTAGG 658
consensus_7644#1 GTGCGGGG-CGA-TCCCA--GTGGCAG----TTGTGCAAGGCCGGATGCCTTTTTCCTTT 634
******* *** **** ****** ****** * * * * *
consensus_7644#0 CCCTTTTGCCGTCTGGCNCGCAGAAGTTGG-GCCCGANAGGGCACCGCCATTTTTGGGAA 717
consensus_7644#1 CCTTGCAAATGCCAGCCCCTTGGACGCTAGCGCGTGGGGTTTTTCAGGCAGACGAGGCCA 694
** * * * * * * ** * * * ** * * * ** ** *
consensus_7644#0 GCNGCCGTAAGGGCGGCCGTTTGNGGNGGGTTACTC-GATCTCCAAGGGGGCCGAAGAGA 776
consensus_7644#1 GCAGCATGATCGAAAGAAGTTTGCAAACGCTTTCCCTGCTCGCTAGCCGTTTTCTACTAA 754
** ** * * * ***** * ** * * * ** * * * * *
consensus_7644#0 ACAGAACGGGGGCCCAGGGCGGNGGCAGTTTGAGAGNTGCCGGGAAG 823
consensus_7644#1 GTAGTACCT--NCCTATAATCATTAC----TGCNAACTGCT------ 789
** ** ** * * ** * ***
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||