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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7648#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1209 fasta sequence
[CAGAATCGCACGAGGTGNATTCTCCGAACAAAAAATAAAGCACAAAAGCCCCCAAAATGGTCCGCACCAAGGTGTCCCGTGCGGCTACCAAGCGCGGTCAGAACAGTTCCGACTCGAAGCTGTACATTGAGATGAAGCTGCGCGATTTCGACGTCATATCCGATTGCCATCTGACCAACATCGAGCTCAAGTTCCAGAACGATATGGACCGGCTGAACCGGGCGTTTGAGGTGATGCGTTCGCGCATCCCCAAAAACTTGCTCTCCCTCACGATGGGCGAGCTGCGCGCATTGCAAAAA-GCAACGGAAGAGC-TGAA-CACTTCG--CCACAGCTGAATCAAACGGTTAGCGCTAACATGAGCGCCCTGCTGGAGAAATCTTGTCGCAAAAAGTCCAAAGACGATGAGGAGAGCGAGCAGGGCGACACGTACCGGATGGGATCGCTCAAGCCGTCGTCTAAGGCACGCTTTGGCCCGCTGATGTCGGCCAGAACACGGCGCCGCAGCAAATCTACCAGCGCGATCGCGACACCGACCGTAAACCGCACGCTGTTCCTGCCCCAGAGTGCAATGGCCGGACGACTGCAGCAGCCAGGATCGACCGTGAAAGCCCTTACAGCGACCGCAGTAGCACCACCACCGCCGGGTTCGGAACGTACTTCCCGTTCGAAGCTGAAGAGCTCGCTCGCAACCAATCGCCCCAAAGCGATCAGTGCCGATCGGGGGTACGGTGTGATCACGCCAAAGGTACAACCGTACGCCGCCCTGGCAATGATCCGGCACGCGAAACAGGGCGAGTCGGTGTTCTCGCTCACGGGCAGTCCGGTCGTTACCGCGAACATGCTGGAGTCAAGCGCCAACGTGAATATCCCCGTGTCCAACGGTATGATTGCCATCAGACCGACCGAGCTGGACGTGATCGATGAATCGCTCATACGCAAGATCGACCCGAACGTGCTGATGGAGCTGAAGCAGCTGCAAACGAATCTGGACAAAATTATGAGCACGCTTAACCTTTCCTGAGAAGAGCGAGCCACTCAGCCGCCGTGTAAGTGTAGTAGTTTTCCGGGGGCCCTTTTTTCTACTATTAGTTTTTGACACACATCAACGTCGTGTTTTATGTTGATAAATCATTTCTCTCTGTCTCGTATTAGTATTATAAGCTATTTTATTCAGACTGAATAAACGTACCAATTTGAATCACTAAAAAAAA]
[+] EMBL BX469455 [CAGAATCGCACGAGGTGNATTCTCCGAACAAAAAATAAAGCACAAAAGCCCCCAAAATGGTCCGCACCAAGGTGTCCCGTGCGGCTACCAAGCGCGGTCAGAACAGTTCCGACTCGAAGCTGTACATTGAGATGAAGCTGCGCGATTTCGACGTCATATCCGATTGCCATCTGACCAACATCGAGCTCAAGTTCCAGAACGATATGGACCGGCTGAACCGGGCGTTTGAGGTGATGCGTTCGCGCATCCCCAAAAACTTGCTCTCCCTCACGATGGGCGAGCTGCGCGCATTGCAAAAAGGCAACGGAAGAGCGTGAAGCACTTCGGCCCACAGCTGAATCAAACGGTTAGCGCTAACATGAGCGCCCTG ]
[+] EMBL BX621172 [ CGATGGGCGAGCTGCGCGCATTGCAAAAA GCAACGGAAGAGC TGAA CACTTCG CCACAGCTGAATCAAACGGTTAGCGCTAACATGAGCGCCCTGCTGGAGAAATCTTGTCGCAAAAAGTCCAAAGACGATGAGGAGAGCGAGCAGGGCGACACGTACCGGATGGGATCGCTCAAGCCGTCGTCTAAGGCACGCTTTGGCCCGCTGATGTCGGCCAGAACACGGCGCCGCAGCAAATCTACCAGCGCGATCGCGACACCGACCGTAAACCGCACGCTGTTCCTGCCCCAGAGTGCAATGGCCGGACGACTGCAGCAGCCAGGATCGACCGTGAAAGCCCTTACAGCGACCGCAGTAGCACCACCACCGCCGGGTTCGGAACGTACTTCCCGTTCGAAGCTGAAGAGCTCGCTCGCAACCAATCGCCCCAAAGCGATCAGTGCCGATCGGGGGTACGGTGTGATCACGCCAAAGGTACAACCGTACGCCGCCCTGGCAATGATCCGGCACGCGAAACAGGGCGAGTCGGTGTTCTCGCTCACGGGCAGTCCGGTCGTTACCGCGAACATGCTGGAGTCAAGCGCCAACGTGAATATCCCCGTGTCCAACGGTATGATTGCCATCAGACCGACCGAGCTGGACGTGATCGATGAATCGCTCATACGTAAGATCGACCCGAACGTGCTGATGGAGCTGAAGCAGCTGCAAACGAATCTGGAC AAATTATGAGCACGCTTTACCTTTCCTGANAAGAGCGAGCCGCT ]
[+] EMBL BX621484 [ AAAAGTCCAAAGACGATGAGGAGAGCGAACAGGGCGACACGTACCGGATGGGATCGCTCAAGCCGTCGTCTAAGGCACGCTTTGGCCCGCTGATGTCGGCCAGAACACGGCGCCGCAGCAAATCTACCAGCGCGATCGCGACACCGACCGTAAACCGCACGCTGTTCCTGCCCCAGAGTGCAATGGCCGGACGACTGCAGCAGCCAGGATCGACCGTGAAAGCCCTTACAGCGACCGCAGTAGCACCACCACCGCCGGGTTCGGAACGTACTTCCCGTTCGAAGCTGAAGAGCTCGCTCGCAACCAATCGCCCCAAAGCGATCAGTGCCGATCGGGGGTACGGTGTGATCACGCCAAAGGTACAACCGTACGCCGCCCTGGCAATGATCCGGCACGCGAAACAGGGCGAGTCGGTGTTCTCGCTCACGGGCAGTCCGGTCGTTACCGCGAACATGCTGGAGTCAAGCGCCAACGTGAATATCCCCGTGTCCAACGGTATGATTGCCATCAGACCGACCGAGCTGGACGTGATCGATGAATCGCTCATACGCAAGATCGACCCGAACGTGCTGATGGAGCTGAAGCAGCTGCAAACGAATCTGGACAAAATTATGAGCACGCTTAACCTTTCCTGAGAAGAGCGAGCCACTCAGCCGCCGTGTAAGTGTAGTAGTTTTCCGGGGGGCCTTTTTTCTACTATTAGTTTTTG ]
[-] EMBL AGA284235 [ GTTACCGCGAACATGCTGGAGTCAAGCGCCAACGTGAATATCCCCGTGTCCAACGGTATGATTGCCATCAGACCGACCGAGCTGGACGTGATCGATGAATCGCTCATACGCAAGATCGACCCGAACGTGCTGATGGAGCTGAAGCAGCTGCAAACGAATCTGGACAAAATTATGAGCACGCTTAACCTTTCCTGAGAAGAGCGAGCCACTCAGCCGCCGTGTAAGTGTAGTAGTTTTCCGGGGGCCCTTTTTTCTACTATTAGTTTTTGACACACATCAACGTCGTGTTTTATGTTGATAAATCATTTCTCTCTGTCTCGTATTAGTATTATAAGCTATTTTATTCAGACTGAATAAACGTACCAATTTGAATCACTAAAAAAAA]
[+] EMBL AGA281129 [ TTATGAGCACGCTTAACCTTTCCTGAGAAGAGCGAGCCACTCAGCCGCCGTGTAAGTGTAGTAGTTTTCCGGGGGCCCTTTTTTCTACTATTAGTTTTTGACACACATCAACGTCGTGTTTTATGTTGATAAATCAT ]
[-] EMBL AGA282757 [ TATGAGCACGCTTAACCTTTCCTGAGAAGAGCGAGCCACTCAGCCGCCGTGTAAGTGTAGTAGTTTTCCGGGGGCCCTTTTTTCTACTATTAGTTTTTGACACACATCAACGTCGTGTTTTATGTTG ]
consensusID : consensus_7648#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 751 fasta sequence
[CCGAGCGAACCCTCCCTGCATCAAAGACGCGCTTGGAAAGTGAGTAAAGTTTTCTCCGAACAAAAAATACAGCACAAAAGCCCCCAAAATGGTCCGCACCAAGGTGTCCCGTGCGGCTACCAAGCGCGGTCAGAACAGCTCCGACTCGAAGCTGTACATTGAGATGAAGCTGCGCGATTTCGACGTCATATCCGATTGCCATCTGACCAACATCGAGCTCAAGTTCCAGAACGATATGGACCGGCTGAACCGGGCGTTTGAGGTGATGCGTTCGCGCATCCCCAAAAACTTGCTCACCCTCACGATGGGCGAGCTGCGCGCATTGCAAAAAGCAACGGAAGAGCTGAACACTTCGCCACAGCTGAATCAAACGGTGAGCGCTAACATGAGCGCCCTGCTGGAGAAATCTTGTCGCAAAAAGTCCAAAGACGATGGTTACCTTACAGAGGAGAGCGAACAGGGCGACACGTACCGGATGGGATCGCTCAAGCCGTCGTCTAAGGCACGCTTTGGCCCGCTGATGTCGGCCAGAACACGGCGCCGCAGCAAATCTACCAGCGCGATCGCGACACCGACCGTAAACCGCACGCTGTTCCTAGCCCCAGAGTGCAATGGCCGGACGACTGCAGCAGCCAGGATCGACCGTGAAAGCCCTTACAGCGACCGCAGTAGCACCACCCACCGCCGGGTTCGGAACGTACTTCCCGTTCGAAGCTGAAGAGCTCGCTCGCAACCAATCGCCCCAAAGCGA]
[+] EMBL BM586013 [CCGAGCGAACCCTCCCTGCATCAAAGACGCGCTTGGAAAGTGAGTAAAGTTTTCTCCGAACAAAAAATACAGCACAAAAGCCCCCAAAATGGTCCGCACCAAGGTGTCCCGTGCGGCTACCAAGCGCGGTCAGAACAGCTCCGACTCGAAGCTGTACATTGAGATGAAGCTGCGCGATTTCGACGTCATATCCGATTGCCATCTGACCAACATCGAGCTCAAGTTCCAGAACGATATGGACCGGCTGAACCGGGCGTTTGAGGTGATGCGTTCGCGCATCCCCAAAAACTTGCTCACCCTCACGATGGGCGAGCTGCGCGCATTGCAAAAAGCAACGGAAGAGCTGAACACTTCGCCACAGCTGAATCAAACGGTGAGCGCTAACATGAGCGCCCTGCTGGAGAAATCTTGTCGCAAAAAGTCCAAAGACGATGGTTACCTTACAGAGGAGAGCGAACAGGGCGACACGTACCGGATGGGATCGCTCAAGCCGTCGTCTAAGGCACGCTTTGGCCCGCTGATGTCGGCCAGAACACGGCGCCGCAGCAAATCTACCAGCGCGATCGCGACACCGACCGTAAACCGCACGCTGTTCCTAGCCCCAGAGTGCAATGGCCGGACGACTGCAGCAGCCAGGATCGACCGTGAAAGCCCTTACAGCGACCGCAGTAGCACCACCCACCGCCG ]
[+] EMBL AGA285535 [ CCAAAGACGATGGTTACCTTACAGAGGAGAGCGAACAGGGCGACACGTACCGGATGGGATCGCTCAAGCCGTCGTCTAAGGCACGCTTTGGCCCGCTGATGTCGGCCAGAACACGGCGCCGCAGCAAATCTACCAGCGCGATCGCGACACCGACCGTAAACCGCACGCTGTTCCT GCCCCAGAGTGCAATGGCCGGACGACTGCAGCAGCCAGGATCGACCGTGAAAGCCCTTACAGCGACCGCAGTAGCACCA CCACCGCCGGGTTCGGAACGTACTTCCCGTTCGAAGCTGAAGAGCTCGCTCGCAACCAATCGCCCCAAAGCGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7648#0 --------------------------------CAGAATCGCACGAGGTGNATTCTCCGAA 28
consensus_7648#1 CCGAGCGAACCCTCCCTGCATCAAAGACGCGCTTGGAAAGTGAGTAAAGTTTTCTCCGAA 60
* * * * * *********
consensus_7648#0 CAAAAAATAAAGCACAAAAGCCCCCAAAATGGTCCGCACCAAGGTGTCCCGTGCGGCTAC 88
consensus_7648#1 CAAAAAATACAGCACAAAAGCCCCCAAAATGGTCCGCACCAAGGTGTCCCGTGCGGCTAC 120
********* **************************************************
consensus_7648#0 CAAGCGCGGTCAGAACAGTTCCGACTCGAAGCTGTACATTGAGATGAAGCTGCGCGATTT 148
consensus_7648#1 CAAGCGCGGTCAGAACAGCTCCGACTCGAAGCTGTACATTGAGATGAAGCTGCGCGATTT 180
****************** *****************************************
consensus_7648#0 CGACGTCATATCCGATTGCCATCTGACCAACATCGAGCTCAAGTTCCAGAACGATATGGA 208
consensus_7648#1 CGACGTCATATCCGATTGCCATCTGACCAACATCGAGCTCAAGTTCCAGAACGATATGGA 240
************************************************************
consensus_7648#0 CCGGCTGAACCGGGCGTTTGAGGTGATGCGTTCGCGCATCCCCAAAAACTTGCTCTCCCT 268
consensus_7648#1 CCGGCTGAACCGGGCGTTTGAGGTGATGCGTTCGCGCATCCCCAAAAACTTGCTCACCCT 300
******************************************************* ****
consensus_7648#0 CACGATGGGCGAGCTGCGCGCATTGCAAAAAGCAACGGAAGAGCTGAACACTTCGCCACA 328
consensus_7648#1 CACGATGGGCGAGCTGCGCGCATTGCAAAAAGCAACGGAAGAGCTGAACACTTCGCCACA 360
************************************************************
consensus_7648#0 GCTGAATCAAACGGTTAGCGCTAACATGAGCGCCCTGCTGGAGAAATCTTGTCGCAAAAA 388
consensus_7648#1 GCTGAATCAAACGGTGAGCGCTAACATGAGCGCCCTGCTGGAGAAATCTTGTCGCAAAAA 420
*************** ********************************************
consensus_7648#0 GTCCAAAGACGATG------------AGGAGAGCGAGCAGGGCGACACGTACCGGATGGG 436
consensus_7648#1 GTCCAAAGACGATGGTTACCTTACAGAGGAGAGCGAACAGGGCGACACGTACCGGATGGG 480
************** ********** ***********************
consensus_7648#0 ATCGCTCAAGCCGTCGTCTAAGGCACGCTTTGGCCCGCTGATGTCGGCCAGAACACGGCG 496
consensus_7648#1 ATCGCTCAAGCCGTCGTCTAAGGCACGCTTTGGCCCGCTGATGTCGGCCAGAACACGGCG 540
************************************************************
consensus_7648#0 CCGCAGCAAATCTACCAGCGCGATCGCGACACCGACCGTAAACCGCACGCTGTTCCT-GC 555
consensus_7648#1 CCGCAGCAAATCTACCAGCGCGATCGCGACACCGACCGTAAACCGCACGCTGTTCCTAGC 600
********************************************************* **
consensus_7648#0 CCCAGAGTGCAATGGCCGGACGACTGCAGCAGCCAGGATCGACCGTGAAAGCCCTTACAG 615
consensus_7648#1 CCCAGAGTGCAATGGCCGGACGACTGCAGCAGCCAGGATCGACCGTGAAAGCCCTTACAG 660
************************************************************
consensus_7648#0 CGACCGCAGTAGCACCACC-ACCGCCGGGTTCGGAACGTACTTCCCGTTCGAAGCTGAAG 674
consensus_7648#1 CGACCGCAGTAGCACCACCCACCGCCGGGTTCGGAACGTACTTCCCGTTCGAAGCTGAAG 720
******************* ****************************************
consensus_7648#0 AGCTCGCTCGCAACCAATCGCCCCAAAGCGATCAGTGCCGATCGGGGGTACGGTGTGATC 734
consensus_7648#1 AGCTCGCTCGCAACCAATCGCCCCAAAGCGA----------------------------- 751
*******************************
consensus_7648#0 ACGCCAAAGGTACAACCGTACGCCGCCCTGGCAATGATCCGGCACGCGAAACAGGGCGAG 794
consensus_7648#1 ------------------------------------------------------------
consensus_7648#0 TCGGTGTTCTCGCTCACGGGCAGTCCGGTCGTTACCGCGAACATGCTGGAGTCAAGCGCC 854
consensus_7648#1 ------------------------------------------------------------
consensus_7648#0 AACGTGAATATCCCCGTGTCCAACGGTATGATTGCCATCAGACCGACCGAGCTGGACGTG 914
consensus_7648#1 ------------------------------------------------------------
consensus_7648#0 ATCGATGAATCGCTCATACGCAAGATCGACCCGAACGTGCTGATGGAGCTGAAGCAGCTG 974
consensus_7648#1 ------------------------------------------------------------
consensus_7648#0 CAAACGAATCTGGACAAAATTATGAGCACGCTTAACCTTTCCTGAGAAGAGCGAGCCACT 1034
consensus_7648#1 ------------------------------------------------------------
consensus_7648#0 CAGCCGCCGTGTAAGTGTAGTAGTTTTCCGGGGGCCCTTTTTTCTACTATTAGTTTTTGA 1094
consensus_7648#1 ------------------------------------------------------------
consensus_7648#0 CACACATCAACGTCGTGTTTTATGTTGATAAATCATTTCTCTCTGTCTCGTATTAGTATT 1154
consensus_7648#1 ------------------------------------------------------------
consensus_7648#0 ATAAGCTATTTTATTCAGACTGAATAAACGTACCAATTTGAATCACTAAAAAAAA 1209
consensus_7648#1 -------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||