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Anopheles gambiae
cluster # 7653 cluster # 7653       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7653#0 length = 818 sequences # 7  
consensus_7653#1 length = 641 sequences # 1  

consensusID : consensus_7653#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 818
fasta sequence
                              [GAGAAAACAACACACATATTTACATCCACAACTTATCAGCCCAACTTCGTCACCGTGCTGTTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTC-AAA---------CGC-----G-----ACTATTCTCCTTCGTCCGTTTAGTGTTTGTGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAATCCGCTGGACACCGCCGTCA-TTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGT-GACGTACGTGTACCAGCTGGTGGGCGAC-GACGTTAAGGTGGAACGGATCGAGTATAAGAAGAATTGAAGAGGCAAACAAACCGCCAGCCATTTCGAGCACACGGCCGACCGTTCGGCAGAGTGCGACAAAATAGGACGTTAATCGAATAACAACAGA]

[+] EMBL BX628568             [GAGAAAACAACACACATATTTACATCCACAACTTATCAGCCCAACTTCGTCACCGTGCTGTTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTC AAA         CGC     G     ACTATTCTCCTTCGTCCGTTTAGTGTTTGAGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGG  ATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAATCCGCTGGACACCGCCGTCA TTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGT GACGTACGTGTACCAGCTGGTGGGCGAC GACGTTAAGGTGGAACGGATCGAGTATAAGAAGAATTGAAGAGG                                                                                     ]
[+] EMBL BX626544             [                              ACTTATCAGCCCAACTTCGTCACCGTGCTGTTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTCTAAAGCTACTTGTCCC     C     ACTATTATCCTTCGTCCGTTTAGTGTTTGTGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGGCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAATCCGCTGGACACCGCCGTCATTTCCGTCCTTTGTGCTGATGGACATNCAGAGCACGACGGTCGTGGACGTACGTG                                                                                                                                                    ]
[+] EMBL BM635362             [                                         ccgCTTCGTCACCGTGCTGTTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTC AAA         AGCCACTTGTCCCCACTATTCTCCTTCGTCCGTTTAGTGTTTGTGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAATCCGCTGGACACCGCCGTCA TTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGT GACGTACGTGTACCAGCTGGTGGGCGACGGACGTTAAGGTG                                                                                                                     ]
[+] EMBL BX626339             [                                             TTCGTCACCGTGCTGTTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTC AAA         AGCCACTTGTCCCCACTATTCTCCTTCGTCCGTTTAGTGTTTGTGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAATCCGCTGGACACCGCCGTCA TTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGT GACGTACGTGTACCAGCTGGTGGGgcg                                                                                                                                   ]
[+] EMBL BM636236             [                                            ccgCGTCACCGTGCTGTTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTCTAAAGCTACTTGTCTC     C     ACTATTCTCCTTCGTCCGTTTGGTGTTTGAGTGATATAGACGATCGTTCGCAGGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCGGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGTATCCACCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAACCCGCTGGACACCGCCGTCA TTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGT GACGTACGTGTACCAGCTGGTGGGCGAC GACGTTAAGGTGGAACGGATCGAGTATAAGAAGAAT                                                                                             ]
[+] EMBL BM644949             [                                                                                                                                                         ccgGTGTTTGTGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGT  GCGGAGACTTTGACGAAAACACCAACTACCCGCAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCAC                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM597865             [                                                                                                                                                           ccgGTTTGAGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGTATCCACCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAACCCGCTGGACACCGCCGTCA TTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGT GACGTACGTGTACCAGCTGGTGGGCGAC GACGTTAAGGTGGAACGGATCGAGTATAAGAAGAATTGAGCAAGCAAACAAACCGCCAGCCATTTCGAGCACACGGCCGACCGTTCGGCAGAGTGCGACAAAATAGGACGTTAATCGAATAACAACAGA]


>consensus_7653#0 GAGAAAACAACACACATATTTACATCCACAACTTATCAGCCCAACTTCGTCACCGTGCTG TTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTCAAACGCGACTATT CTCCTTCGTCCGTTTAGTGTTTGTGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGA TGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCA AGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGT GCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCG GAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCC GGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCC TCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAG CGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAATC CGCTGGACACCGCCGTCATTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCG TGACGTACGTGTACCAGCTGGTGGGCGACGACGTTAAGGTGGAACGGATCGAGTATAAGA AGAATTGAAGAGGCAAACAAACCGCCAGCCATTTCGAGCACACGGCCGACCGTTCGGCAG AGTGCGACAAAATAGGACGTTAATCGAATAACAACAGA



consensusID : consensus_7653#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 641
fasta sequence
                              [CCGGTCTAAAGCTACTTGTCTCCACTATTCTCCTTCGTCCGTTTAGTGTTTGAGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGTATCCACCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAACCCGCTGGACACCGCCGTCATTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGTGACGTACGTGTACCAGCTGGTGGGCGACGACGTTAAGGTGGAACGGATCGAGTATAAGAAGAATTGAGCAA]

[+] EMBL BM595638             [CCGGTCTAAAGCTACTTGTCTCCACTATTCTCCTTCGTCCGTTTAGTGTTTGAGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGTATCCACCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAACCCGCTGGACACCGCCGTCATTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCGTGACGTACGTGTACCAGCTGGTGGGCGACGACGTTAAGGTGGAACGGATCGAGTATAAGAAGAATTGAGCAA]


>consensus_7653#1 CCGGTCTAAAGCTACTTGTCTCCACTATTCTCCTTCGTCCGTTTAGTGTTTGAGTGATAT AGACGATCGTTCGCAAGCAAATGCAAAGATGCTGGTGCTAGTGCTAGGTGACCTACACAT TCCCCACCGGTGCAGCAGTGTTCCGGCCAAGTTTAAGAAGCTGCTCGTACCGGGGCGTAT CCACCACATCCTCTGCACCGGGAACCTGTGCAGTAAGGAATCGTACGACTATCTCAAAAC GCTCGCCAACGATGTGCACATTGTGCGCGGAGACTTTGACGAAAACACCAACTACCCGGA GCAGAAGGTAGTGACGGTCGGACAGTTCCGGATCGGGCTGTCGCACGGCCACCAGGTAGT GCCGTGGGGTGACCCGGAAGCGCTCGCCCTCATCCAGCGGCAGCTCGACGTGGACATACT GATCTCGGGCCACACGCACAAGTTCGAAGCGTACGAGCACGAGAACAAGTTCTACATCAA TCCGGGTTCGGCGACCGGTTCCTACAACCCGCTGGACACCGCCGTCATTCCGTCCTTTGT GCTGATGGACATCCAGAGCACGACGGTCGTGACGTACGTGTACCAGCTGGTGGGCGACGA CGTTAAGGTGGAACGGATCGAGTATAAGAAGAATTGAGCAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7653#0      GAGAAAACAACACACATATTTACATCCACAACTTATCAGCCCAACTTCGTCACCGTGCTG 60
consensus_7653#1      ------------------------------------------------------------
                                                                                  

consensus_7653#0      TTATCGTACGCCCTCCCACATATTCCTTCCGGGCGGATCGTATAGTCAAACGCGACTATT 120
consensus_7653#1      ----------------------------CCGGTCTAAAGCTA---CTTGTCTCCACTATT 29
                                                  **** *  *   **        * * ******

consensus_7653#0      CTCCTTCGTCCGTTTAGTGTTTGTGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGA 180
consensus_7653#1      CTCCTTCGTCCGTTTAGTGTTTGAGTGATATAGACGATCGTTCGCAAGCAAATGCAAAGA 89
                      *********************** ************************************

consensus_7653#0      TGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCA 240
consensus_7653#1      TGCTGGTGCTAGTGCTAGGTGACCTACACATTCCCCACCGGTGCAGCAGTGTTCCGGCCA 149
                      ************************************************************

consensus_7653#0      AGTTTAAGAAGCTGCTCGTACCGGGGCGCATCCATCACATCCTCTGCACCGGGAACCTGT 300
consensus_7653#1      AGTTTAAGAAGCTGCTCGTACCGGGGCGTATCCACCACATCCTCTGCACCGGGAACCTGT 209
                      **************************** ***** *************************

consensus_7653#0      GCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCG 360
consensus_7653#1      GCAGTAAGGAATCGTACGACTATCTCAAAACGCTCGCCAACGATGTGCACATTGTGCGCG 269
                      ************************************************************

consensus_7653#0      GAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCC 420
consensus_7653#1      GAGACTTTGACGAAAACACCAACTACCCGGAGCAGAAGGTAGTGACGGTCGGACAGTTCC 329
                      ************************************************************

consensus_7653#0      GGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCC 480
consensus_7653#1      GGATCGGGCTGTCGCACGGCCACCAGGTAGTGCCGTGGGGTGACCCGGAAGCGCTCGCCC 389
                      ************************************************************

consensus_7653#0      TCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAG 540
consensus_7653#1      TCATCCAGCGGCAGCTCGACGTGGACATACTGATCTCGGGCCACACGCACAAGTTCGAAG 449
                      ************************************************************

consensus_7653#0      CGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAATC 600
consensus_7653#1      CGTACGAGCACGAGAACAAGTTCTACATCAATCCGGGTTCGGCGACCGGTTCCTACAACC 509
                      ********************************************************** *

consensus_7653#0      CGCTGGACACCGCCGTCATTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCG 660
consensus_7653#1      CGCTGGACACCGCCGTCATTCCGTCCTTTGTGCTGATGGACATCCAGAGCACGACGGTCG 569
                      ************************************************************

consensus_7653#0      TGACGTACGTGTACCAGCTGGTGGGCGACGACGTTAAGGTGGAACGGATCGAGTATAAGA 720
consensus_7653#1      TGACGTACGTGTACCAGCTGGTGGGCGACGACGTTAAGGTGGAACGGATCGAGTATAAGA 629
                      ************************************************************

consensus_7653#0      AGAATTGAAGAGGCAAACAAACCGCCAGCCATTTCGAGCACACGGCCGACCGTTCGGCAG 780
consensus_7653#1      AGAATTGAGCAA------------------------------------------------ 641
                      ********  *                                                 

consensus_7653#0      AGTGCGACAAAATAGGACGTTAATCGAATAACAACAGA 818
consensus_7653#1      --------------------------------------
                                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)