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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7670#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 903 fasta sequence
[CCCGGCGCTGTCAG-AGAGGAAAACAAAACACGAGCACGATTGTACAACACA-ATAATAATTCCG-TAAGAAAGGGCTCGC-AAAATGGCTGGCATTATTCGTTCTACACTTGCGGGAAGGAATGCGGTCGCACTGCTCACCCAAAAGTCTGTGGATGTCACATGCTTCCGGTATGCCAGTTCAAATCGCGTGAAGCGCATCAAAAAGCCAGAAATTACCAATCGCGATGCGAATCAGGCCAAAGCGGCTGCAATGCGTGCGGAGGCGGAAGAGCAGAGCTTGCTGTACGAGGGCAAGCGGTTTGAATCGGTCGCACAATCCCTTTCCGCTCGAGGCTACTTACGCGCAATCAAACCCTACACGCCACCGGAAAACGTTGCCGAGCAGGTGCTTAAGTTGGCCAAAGAGAATGGTTTGATCGATGCCAGGCAGCCGTTCGGTGGGATGGAGAAGAAATTTGCATTTCTGTCGGCATGCGGCAAAGCGCTCGGGCATTGGGTGCCGAATTCAATGCTGCACGAGGTACAAACCGTGGAGGATGCCACGATATTCTACCAAACACCAATCGACACACGACTTCCGCTCGATGCGATACGCTCGGTAGAGCTGCCGGAAAATCTCCACATCCAGCAGGATTATGTGCGCTTCCATCCGGAAACGGATACGATGTTCGGTGGAAAGTCGGCCTTCCCGAAGAGTTCGACGGTTGTGACCGGGCTGAAGTACAAACAGAAATACCGTGGCCACGAGGCGAAGAAATCTTGGCCATAGGCTGGGGTGGCAACCGTTACCGGGGATGTAATGTAGGCGTTAATAGTGTGTTTGAAATAAAGGAACCCCGTGGCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCCATGTTCCCCCCC]
[+] EMBL BM605592 [ CCGGCGCTGTCAG AGAGGAAAACAAAACACGAGCACGATTGTACAACACA ATAATAATTCCG TAAGAAAGGGCTCGC AAAATGGCTGGAATTATTCGTTCTACACTTGCGGGAAGGAATGCGATCGCACTGCTCACCCAAAAGTCTGTGGATGTCACATGCTTCCGGTATGCCAGTTCAAATCGCGTGAAGCGCATCAAAAAGCCAGAAATTACCAATCGCGATGCGAATCAGGCCAAAGCGGCTGCAATGCGTGCGGAGGCGGAAGAGCAGAGCTTGCTGTACGAGGGCAAGCGGTTTGAATCGGTCGCACAATCCCTTTCCGCTCGAGGCTACTTACGCGCAATCAAACCCTACACGCCACCGGAAAACGTTGCCGAGCAGGTGCTTAAGTTGGCCAAAGAGAATGGTTTGATCGATGCCAGGCAGCCGTTCGGTGGGATGGAGAAGAAATTTGCATTTCTGTCGGCATGCGGCAAAGCGCTCGGGCATTGGGTGCCGAATTCAATGCTGCACGAGGTACAAACCGTGGAGGATGCCACGATATTCTACCAAACACCAATCGACACACGACTTCCGCTCGATGCGATACGCTCGGTAGAGCTGCCGGAAAATCTCCACATCCAGCAGGATTATGTGCGCTTCCATCCGGAAACGGATACGATG ]
[+] EMBL AL933363 [caggtttaTGTCAGCAGAGGAAAACAAAACACGAGCACGATTGTACAACAAACATAATAATTCCGCTAAAAACGGGCTCGCTAAAATGGCTGGCATTATTCGTTCTACACTTGCGGGAAGGAATGCGGTCGCACTGCTCACCCAAAAGTCTGTGGATGTCACATGCTTCCGGTATGCCAGTTCAAATCGTGTGAAGCGCATCAAAAAGCCAGAAATTACCAATCGCGATGCGAATCAGGCCAAAGCGGCTGCAATGCGTGCGGAGGCGGAAGAGCAGAGCTTGCTGTACGAGGGCAAGCGGTTTGAATCGGTCGCACAATCCCTTTCCGCTCGAGGCTACTTACGCGCAATCAAACCCTACACGCCACCGGAAAACGTTGCCAAGCAGG ]
[+] EMBL CNS093O4 [ gctactggGTACAACACA ATAATAATTCCG TAAGAAAGGGCTCGC AAAATGGCTGGAATTATTCGTTCTACACTTGCGGGAAGGAATGCGATCGCACTGCTCACCCAAAAGTCTGTGGATGTCACATGCTTCCGGTATGCCAGTTCAAATCGCGTGAAGCGCATCAAAAAGCCAGAAATTACCAATCGCGATGCGAATCAGGCCAAAGCGGCTGCAATGCGTGCGGAGGCGGAAGAGCAGAGCTTGCTGTACGAGGGCAAGCGGTTTGAATCGGTCGCACAATCCCTTTCCGCTCGAGGCTACTTACGCGCAATCAAACCCTACACGCCACCGGAAAACGTTGCCGAGCAGGTGCTTAAGTTGGCCAAAGAGAATGGTTTGATCGATGCCAGGCAGCCGTTCGGTGGGATGGAGAAGAAATTTGCATTTCTGTCGGCATGCGGCAAAGCGCTCGGGCATTGGGTGCCGAATTCAATGCTGCACGAGGTACAAACCGTGGAGGATGCCACGATATTCTACCAAACACCAATCGACACACGACTTCCGCTCGATGCGATACGCTCGGTAGAGCTGCCGGAAAATCTCCACATCCAGCAGGATTATGTGCGCTTCCATCCGGAAACGGATACGATGTTCGGTGGAAAGTCGGCCTTCCCGAAGAGTTCGACGGTTGTGACCGGGCTGAAGTACAAACAGAAATACCGTGGCCACGAGGCGAAGAAATCTTGGCCATAGGCTGGGGTGGCAACCGTTACCGGGGATGTAATGTAGGCGTTAATAGTGTGTTTGAAATAAAGGAACCCCGTGGCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCCATGTTCCCCCCC]
[+] EMBL BX469033 [ AATGGCTGCCATTATTCGTTCTACACTTGCGGGAAGGAATGCGGTCGCACTGCTCACCCAAAAGTCTGTGGATGTCACATGCTTCCGGTATGCCAGTTCAAATCGCGTGAAGCGCATCAAAAAGCCAGAAATTACCAATCGCGATGCGAATCAGGCCAAAGCGGCTGCAATGCGTGCGGAGGCGGAAGAGCAGAGCTTGCTGTACGAGGGCAAGCGGTTTGAATCGGTCGCACAATCCCTTTCCGCTCGAGGCTACTTACGCGCAATCAAACCCTACACGCCACCGGAAAAacg ]
[+] EMBL AGA282667 [ GCTGCCATTATTCGTTCTACACTTGCGGGAAGGAATGCGGTCGCACTGCTCACCCAAAAGTCTGTGGATGTCACATGCTTCCGGTATGCCAGTTCAAATCGCGTGAAGCGCATCAAAAAGCCAGAAATTACCAATCGCGATGCGAATCAGGCCAAAGCGGCTGCAATGCGTGCGGAGGCGGAAGAGCAGAGCTTGCTGTACGAGGGCAAGCGGTTTGAATCGGTCGCACAATCCCTTTCCGCTCGAGGCTACTTACGCGCAATCAAACCCTACACGCCACCGGAAAACGTTGCCGAGCAGGTGCTTAAGTTGGCCAAAGAGAATGGTTTGACCGACGCCAGGAAGCCGTTCGGTGGGATGGAGAAGAAATTTGCATTTCTGTCGGCATGCGGCAAAGCGCTCGGGCACTGGGTACCGAATTCAATGCT ]
[-] EMBL AGA281039 [ GCGCTCGGGCAATGGGTACCGAATTCAATGCTGCAGGAGGTACAAACCGTGGAGGATGCCACGATATTTTACCAAACCCCAATCGACACACGACTTCCGCTCGATGCGATACGTTCGGTAGAGCTGCCGGAAAATCTCCACATCCAGCAGGATTATGTGCGCTTCCATCCGGAAACGGATACGATGTTCGGTGGAAAGTCGGCCTTCCCGAAGAGTTCGACGGTTGTGACCGGGCTGAAGTACAAACAGAAATACCGTGGCCACGAGGCGAAGAAATCTTGGCCATAGGCGGGGGCGGCAACCGTTACCGGGGATGTAATGTAGGCGTTAATAGTGTGTTTGAAATAAAGGAACCCCGTGGCAAATTTAAAAAAAA ]
[-] EMBL CNS08ZFM [ CCAATCAAAAAACGACTTCCGCTCGATGCGATACGCTCGGTAGGGCTGCCGGAAAATCTCCACATCCAGCAGGATTATGTGCGCTTCCATCCGGAAACGGATACGATGTTCGGTGGAAAGTCGGCCTTCCCGAAGAGTTCGACGGTTGTGACCGGGCTGAAGTACAAACAGAAATACCGTGGCCACGAGGCGAAGAAATCTTGGCCATAGGCTGGGGT ]
consensusID : consensus_7670#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 835 fasta sequence
[AATAATAATTCCGTAAGAAAGGGCTCGCAAAATGGCTGGAATTATTCGTTCTACACTTGCGGGAAGGAATGCGATCGCACTGCTCACCCAAAAGTCTGTGGATGTCACATGCTTCCGGTATGCCAGTTCAAATCGCGTGAAGCGCATCAAAAAGCCAGAAATTACCAATCGCGATGCGAATCAGGCCAAAGCGGCTGCAATGCGTGCGGAGGCGGAAGAGCAGAGCTTGCTGTACGAGGGCAAGCGGTTTGAATCGGTCGCACAATCCCTTTCCGCTCGAGGCTACTTACGCGCAATCAAACCCTACACGCCACCGGAAAACGTTGCCGAGCAGGTGCTTAAGTTGGCCAAAGAGAATTTTTTGATCGATGCCAGGCAGCCGTTCGGTGGGATGGAGAAGAAATTTGCATTTCTGTCGGCATGCGGCAAAGCGCTCGGGCATTGGGTGCCGAATTCAATGCTGCACGAGGTACAAACCGTGGAGGATGCCACGATATTCTACCAAACACCAATCGACACACGACTTCCGCTCGATGCGATACGCTCGGTAGAGCTGCCGGAAAATCTCCACATCCAGCAGGATTATGTGCGCTTCCATCCGGAAACGGATACGATGTTCGGTGGAAAGTCGGCCTTCCCGAAGAGTTCGACGGTTGTTACCGGGCTGAAGTACAAACAGAAATACCGTGGCCACGAGGCGAAGTAAATCTTGGCCATAGGCTGGGGTGGCAACGTTACCGGGGATGTAATGTAGGCGTTAATAGTGTGTTTGAAATAAAGGAACCCGTGGCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTTCT]
[+] EMBL CNS08ZFL [AATAATAATTCCGTAAGAAAGGGCTCGCAAAATGGCTGGAATTATTCGTTCTACACTTGCGGGAAGGAATGCGATCGCACTGCTCACCCAAAAGTCTGTGGATGTCACATGCTTCCGGTATGCCAGTTCAAATCGCGTGAAGCGCATCAAAAAGCCAGAAATTACCAATCGCGATGCGAATCAGGCCAAAGCGGCTGCAATGCGTGCGGAGGCGGAAGAGCAGAGCTTGCTGTACGAGGGCAAGCGGTTTGAATCGGTCGCACAATCCCTTTCCGCTCGAGGCTACTTACGCGCAATCAAACCCTACACGCCACCGGAAAACGTTGCCGAGCAGGTGCTTAAGTTGGCCAAAGAGAATTTTTTGATCGATGCCAGGCAGCCGTTCGGTGGGATGGAGAAGAAATTTGCATTTCTGTCGGCATGCGGCAAAGCGCTCGGGCATTGGGTGCCGAATTCAATGCTGCACGAGGTACAAACCGTGGAGGATGCCACGATATTCTACCAAACACCAATCGACACACGACTTCCGCTCGATGCGATACGCTCGGTAGAGCTGCCGGAAAATCTCCACATCCAGCAGGATTATGTGCGCTTCCATCCGGAAACGGATACGATGTTCGGTGGAAAGTCGGCCTTCCCGAAGAGTTCGACGGTTGTTACCGGGCTGAAGTACAAACAGAAATACCGTGGCCACGAGGCGAAGTAAATCTTGGCCATAGGCTGGGGTGGCAACGTTACCGGGGATGTAATGTAGGCGTTAATAGTGTGTTTGAAATAAAGGAACCCGTGGCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7670#0 CCCGGCGCTGTCAGAGAGGAAAACAAAACACGAGCACGATTGTACAACACAATAATAATT 60
consensus_7670#1 --------------------------------------------------AATAATAATT 10
**********
consensus_7670#0 CCGTAAGAAAGGGCTCGCAAAATGGCTGGCATTATTCGTTCTACACTTGCGGGAAGGAAT 120
consensus_7670#1 CCGTAAGAAAGGGCTCGCAAAATGGCTGGAATTATTCGTTCTACACTTGCGGGAAGGAAT 70
***************************** ******************************
consensus_7670#0 GCGGTCGCACTGCTCACCCAAAAGTCTGTGGATGTCACATGCTTCCGGTATGCCAGTTCA 180
consensus_7670#1 GCGATCGCACTGCTCACCCAAAAGTCTGTGGATGTCACATGCTTCCGGTATGCCAGTTCA 130
*** ********************************************************
consensus_7670#0 AATCGCGTGAAGCGCATCAAAAAGCCAGAAATTACCAATCGCGATGCGAATCAGGCCAAA 240
consensus_7670#1 AATCGCGTGAAGCGCATCAAAAAGCCAGAAATTACCAATCGCGATGCGAATCAGGCCAAA 190
************************************************************
consensus_7670#0 GCGGCTGCAATGCGTGCGGAGGCGGAAGAGCAGAGCTTGCTGTACGAGGGCAAGCGGTTT 300
consensus_7670#1 GCGGCTGCAATGCGTGCGGAGGCGGAAGAGCAGAGCTTGCTGTACGAGGGCAAGCGGTTT 250
************************************************************
consensus_7670#0 GAATCGGTCGCACAATCCCTTTCCGCTCGAGGCTACTTACGCGCAATCAAACCCTACACG 360
consensus_7670#1 GAATCGGTCGCACAATCCCTTTCCGCTCGAGGCTACTTACGCGCAATCAAACCCTACACG 310
************************************************************
consensus_7670#0 CCACCGGAAAACGTTGCCGAGCAGGTGCTTAAGTTGGCCAAAGAGAATGGTTTGATCGAT 420
consensus_7670#1 CCACCGGAAAACGTTGCCGAGCAGGTGCTTAAGTTGGCCAAAGAGAATTTTTTGATCGAT 370
************************************************ **********
consensus_7670#0 GCCAGGCAGCCGTTCGGTGGGATGGAGAAGAAATTTGCATTTCTGTCGGCATGCGGCAAA 480
consensus_7670#1 GCCAGGCAGCCGTTCGGTGGGATGGAGAAGAAATTTGCATTTCTGTCGGCATGCGGCAAA 430
************************************************************
consensus_7670#0 GCGCTCGGGCATTGGGTGCCGAATTCAATGCTGCACGAGGTACAAACCGTGGAGGATGCC 540
consensus_7670#1 GCGCTCGGGCATTGGGTGCCGAATTCAATGCTGCACGAGGTACAAACCGTGGAGGATGCC 490
************************************************************
consensus_7670#0 ACGATATTCTACCAAACACCAATCGACACACGACTTCCGCTCGATGCGATACGCTCGGTA 600
consensus_7670#1 ACGATATTCTACCAAACACCAATCGACACACGACTTCCGCTCGATGCGATACGCTCGGTA 550
************************************************************
consensus_7670#0 GAGCTGCCGGAAAATCTCCACATCCAGCAGGATTATGTGCGCTTCCATCCGGAAACGGAT 660
consensus_7670#1 GAGCTGCCGGAAAATCTCCACATCCAGCAGGATTATGTGCGCTTCCATCCGGAAACGGAT 610
************************************************************
consensus_7670#0 ACGATGTTCGGTGGAAAGTCGGCCTTCCCGAAGAGTTCGACGGTTGTGACCGGGCTGAAG 720
consensus_7670#1 ACGATGTTCGGTGGAAAGTCGGCCTTCCCGAAGAGTTCGACGGTTGTTACCGGGCTGAAG 670
*********************************************** ************
consensus_7670#0 TACAAACAGAAATACCGTGGCCACGAGGCGAAG-AAATCTTGGCCATAGGCTGGGGTGGC 779
consensus_7670#1 TACAAACAGAAATACCGTGGCCACGAGGCGAAGTAAATCTTGGCCATAGGCTGGGGTGGC 730
********************************* **************************
consensus_7670#0 AACCGTTACCGGGGATGTAATGTAGGCGTTAATAGTGTGTTTGAAATAAAGGAACCCCGT 839
consensus_7670#1 AAC-GTTACCGGGGATGTAATGTAGGCGTTAATAGTGTGTTTGAAATAAAGGAACCC-GT 788
*** ***************************************************** **
consensus_7670#0 GGCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCCATGTTCCC 899
consensus_7670#1 GGCAAATTAAAAAAAAAAAAAAA------------AAAAAAAAAAAGGCCACATGTTCT- 835
*********************** *************** *******
consensus_7670#0 CCCC 903
consensus_7670#1 ----
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||