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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7704#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1755 fasta sequence
[TTTTTGCTTGAGTAATTGTATTTTCTTGATACGGTGAGATTACATTGGATAAATTACAACAATTTTAACCGTCACAACCATGTCTTCTCTCATCCCAAAAGTCCTCCGTATCACATAAAAAGCCGTCCCACTTTCGGTACGTGTCCTGCACACGCTTCGAACTGTTACGACTGTTTGGTAAGGATTAGGCGAATAAATAAAACTTTTCGTAACGTTGCAATATGCCTGCCTGTGTGTCTCGTTAGTACACTGTGCGCTCTTCTTCTTGCGCGTCTTTGCTTTTGCTGAATTGAAATCTCTTTT-CTTTCCTTCCCTAATATATCCTAAGTCATCTGTTTCGCATGCCTTTTTGTGTAGCTACACTGCCCTACTATACGTCTTACTGTCCTTGCGAAATCGGCAAGGATTAGTTTGCTGTTGGATCCAACAGCCTTACAACTAACCCATTTTCCATACCTGATGCTTCCCTAATATCCTGGATTAATCCTAACGTAAATCTGGCTCATAAATTAGCTTCAATTCCCTAGCGATAGTGAGTACTCCTATGCGTGTTAAATACAATAGCGTTCGCGAACTCGCTGTACCAAAACGGGGGAACTCGTAATACTTTTGCGTTTACTGAAACGGCTTCCTACCTCCCCCGCTTACGCCGTTTGGAGATGCTGCAGGGACGCGTTACACCATACGCTCCTTAGCACTGCACAAATCAACAAACACATAGTTCTTCGATTATGCTGCCACTGTAGCTGCAGCTTCGAAGGATAATACTTTTCGATGCATCGATTTTGGCCACTCCGTTTGCTTTCTTATGGCGTTGTGCTTTTGCGTGAAATTTCGATATCCTGGTATTAGGAACTGTTGCACGCATTTCTACTTTGCCGCTCCTGGTCGCGTATGCGTC-GGCATGCGGTGTTGTTTGTGCGCCTTTTTCACCGGGCAGCACCTCCGT--TCTAACCGATGACCCAGCGTGTAAAACTTAATTATGTCAAGTGTGTGTTACCTCTCTCTGAAAATCATCCGATACGGTTGACTAGAATTGTACCACAACGCACTGACGCTTTTAAAACAAAACACAAATTAAACCGAAACAGAAAAAAATCCTACACATTTTAGAACGGAACCGTTGGTGCACGCTGCCCACAAACGGAGCGTATGCACTTTTCCGTGCACTTTCCGCAACCCGTGCTACCGATAGGACGGTAGCCGTTTGGAAGCGGTTTCTACACGCCGCCCGAAATCTGTTCCTCCTTGCACTGGGCCAGCGAGCGGACCGATACGCGCGAACGTATCGAACGGTTGAGCATGCTCGAACGCAGCTCACCACGGGTCGATGCCCGCAGGGACGCTCCGATCGAGGTCTTGGACGTGGCACGGGTAAATCGCTCCACGGGCAGATCGTCGCAGGTATCGTCGTCATCCACTTTCTTCGTGAGACAGGGGAAGTCCCAGATCTTTTGCCCTCGTCCGAATTCTTCACCATCGGCAAGAGTTTGCGGCAGGTCGTGTCCAAGTGTTTCGGGCAGCAGCAGGGACAGCAGTCCCCCGAAGATACCCAAAATGCCCAGCACTATCAGCGGCAGAGAGGGCGAGATGTTGGCCAGATAGACGACGAACGGTGCCACAATGCTCGCAACGTAGCCCATGATGTGGATGAACGCGACGCCCTGCGCCCGGACGACGGTCGGCAGCAGCTCGGCCGCGTACTGTAGCCCAATGTTGTACGAAATGTTCACACTGAAGCGGACGCGTGGGCGG]
[+] EMBL CNS092IC [TTTTTGCTTGAGTAATTGTATTTTCTTGATACGGTGAGATTACATTGGATAAATTACAACAATTTTAACCGTCACAACCATGTCTTCTCTCATCCCAAAAGTCCTCCGTATCACATAAAAAGCCGTCCCACTTTCGGTACGTGTCCTGCACACGCTTCGAACTGTTACGACTGTTTGGTAAGGATTAGGCGAATAAATAAAACTTTTCGTAACGTTGCAATATGCCTGCCTGTGTGTCTCGTTAGTACACTGTGCGCTCTTCTTCTTGCGCGTCTTTGCTTTTGCTGAATTGAAATCTCTTTT CTTTCCTTCCCTAATATATCCTAAGTCATCTGTTTCGCATGCCTTTTTGTGTAGCTACACTGCCCTACTATACGTCTTACTGTCCTTGCGAAATCGGCAAGGATTAGTTTGCTGTTGGATCCAACAGCCTTACAACTAACCCATTTTCCATACCTGATGCTTCCCTAATATCCTGGATTAATCCTAACGTAAATCTGGCTCATAAATTAGCTTCAATTCCCTAGCGATAGTGAGTACTCCTATTCGTGTTAAATACAATAGCGTTCGCGAACTCGCTATACCAAAAAAGGGGAACTCGTAATACTTTTGCGTTTACTGAAACGACTTCCTACCATCCCCGCTTACGCCGTATGGAGATGCTGCTGGGACGCGTTACACCATACGCTCCTTAGCACTGCACAAATCAACAAACACATAGTTCTTCGATTATGCTGCCACTGTAGCTGCAGCTTCGAAGGATAATACTTTTCGATGCATCGATTTTGGCCACTCCGTTTGCTTTCTTATGGCGTTGTGCTTTTGCGTGAATTTTCGATATCCTGGTATTAGGAACTGTTGCACGCATTTCTACTTTGCCGCTCCTGGTCGCGTATGC TCGGGCATGCGGTGTTGTTTGTGCGCC TTTTCACCGGGCAGCACCTCCGTTCTCTAACCGATGACCCAGCGCGTAAAACTTA ]
[-] EMBL BX601790 [ ACGTTGCAATATGCCTGCCTGTGTGTCTCGTTAGTACACTGTGCGCTCTTCTTCCTGCGCGTCTTTGCTTTTGCTGAATTGAAATCTCTTTTCCCTTCCTTCCCTAATATATCCTAAGTCATCTGTTTCGCATGCGTTTTTGTGTAGCTACACTGCCTTACTATACGTC TACTGTCCTTGCGAATTCGGCAAGGATTAGTTTGCTGTTGGATCCAACAGCCTTACAACTAACCCATTTTCCATACCTGATGCTTCCCTAATATCCTGGATTAATACTAACGTAAATCTGGCTCATAAATTAGCTTCAATTCCCTAGCGATAGTGAGTACTCCTATGCGTGTTAAATACAATAGCGTTCGCGAACTCGCTGTACCAAAACGGGGGAACTCGTAATACTTTTGCGTTTACTGAAACGGCTTCCTACCTCCCCCGCTTACGCCGTTTGGAGATGCTGCAGGGACGCGTTACACCATACGCTCCTTAGCACTGCACAAATCAACAAACACATAGTTCTTCGATTATGCTGCCACTGTAGCTGCAGCTTCGAAGGATAATACTTTTCGATGCATCGATTTTGGCCACTCCGTTTGCTTTCTTATGGCGTTGTGCTTTTGCGTGAAATTTCGATATCCTGGTATTAGGAACTGTTGCACGCATTTCTA ]
[-] EMBL BX612479 [ CTAACGTAATTCTGGCTCATAAATTAGCTTCAATTCCCTAGCGATAGTGAGTACTCCTATGCGTGTTAAATACCATAGCGTTCGCGAACTCGCTGTACCAAAACGGGGGAACTCGTAATACTTTTGCGTTTACTGAAACGGCTTCCTCCCTCCCCCGCTTACGCCGTTTGGAGATGCTGCAGGGACGCGTTACACCATACGCTCCTTAGCACTGCACAAATCAACAAACACATAGTTCTTCGATTATGCTGCCACTGTAGCTGCAGCTTCGAAGGATAATACTTTTCGATGCATCGATTTTGGCCCCTCCGTTTGCTTTCTTATGGCGTTGTGCTTTTGCGTGAAATTTCGATATCCTGGTATTAGGA ]
[-] EMBL BX604254 [ ATGCTGCAGGGACGCGTTACACCATACGCTCCTTAGCACTGCACAAATCAACAAACACTTAGTTCTTCGATTATGCTGCCACTGTAGCTGCAGCTTCGAAGGATAATACTTTTCGATGCATCGATTTTGGCCACTCCGTTTGCTTTCTTATGGCGTTGTGCTTTTGCGTGAAATTTCGATATCCTGGTATTAGGAACTGTTGCACGCATTTATACTTTGCCGCTCCTGGTCGCGTATGCGTC GGCATGCGGTGTTGTTTGTGCGCCTTTTTCACCGGGCAGCACCTCCGT TCTAACCGATGACCCAGCGTGTAAAACTTAATTATGTCAAGTGTGTGTTACCTCTCTCTGAAAATCATCCGATACGGTTGACTAGAATTGTACCACAACGCACTGACGCTTTTAAAACAAAACACAAATTAAA ]
[-] EMBL BM614930 [ GCCACTGTAGCTGCAGCTTCGAAGGATAATACTTTTCGATGCATCGATTTTGGCCACTCCGTTTGCTTTCTTATGGCGTTGTGCTTTTGCGTGAAATTTCGATATCCTGGTATTAGGAACTGTTGCACGCATTTCTACTTTGCCGCTCCTGGTCGCGTATGCGTC GGCATGCGGTGTTGTTTGTGCGCCTTTTTCACCGGGCAGCACCTCCGT TCTAACCGATGACCCAGCGTGTAAAACTTAATTATGTCAAGTGTGTGTTACCTCTCTCTGAAAATCATCCGATACGGTTGACTAGAATTGTACCACAACGCACTGACGCTTTTAAAACAAAACACAAATTAAACCGAAACAGAAAAAAATCCTACACATTTTAGAACGGAACCGTTGGTGCACGCTGCCCACAAACGGAGCGTATGCACTTTTCCGTGCACTTTCCGCAACCCGTGCTACCGATAGGACGGTAGCCGTTTGGAAGCGGTTTCTACACGCCGCCCGAAATCT ]
[-] EMBL BX615396 [ TTGTGCTTTTGCGTGAAATTTCGATATCCTGGTATTAGGAACTGTTGCACGCATTTCTACTTTGCCGCTCCTGGTCGCGTATGCGTC GGCATGCGGTGTTGTTTGTGCGCCTTTTTCACCGGGCAGCACCTCCGT TCTAACCGATGACCCAGCGTGTAAAACTTAATTATGTCAAGTGTGTGTTACCTCTCTCTGAAAATCATCCGATACGGTTGACTAGAATTGTACCACAACGCACTGACGCTTTTAAAACAAAACACAAATTAAACCGAAACAGAAAAAAATCCTACACATTTTAGAACGGAACCGTTGGTGCACGCTGCCCACAAACGGAGCGTAT ]
[-] EMBL BM581131 [ ctTTTCCGCAACCCGTGCTACCGATAGGACGGTAGCCGTTTGGAAGCGGTTTCTACACGCCGCCCGAAATCTGTTCCTCCTTGCACTGGGCCAGCGAGCGGACCGATACGCGCGAACGTATCGAACGGTTGAGCATGCTCGAACGCAGCTCACCACGGGTCGATGCCCGCAGGGACGCTCCGATCGAGGTCTTGGACGTGGCACGGGTAAATCGCTCCACGGGCAGATCGTCGCAGGTATCGTCGTCATCCACTTTCTTCGTGAGACAGGGGAAGTCCCAGATCTTTTGCCCTCGTCCGAATTCTTCACCATCGGCAAGAGTTTGCGGCAGGTCGTGTCCAAGTGTTTCGGGCAGCAGCAGGGACAGCAGTCCCCCGAAGATACCCAAAATGCCCAGCACTATCAGCGGCAGAGAGGGCGAGATGTTGGCCAGATAGACGACGAACGGTGCCACAATGCTCGCAACGTAGCCCATGATGTGGATGAACGCGACGCCCTGCGCCCGGACGACGGTCGGCAGCAGCTCGGCCGCGTACTGTAGCCCAATGTTGTACGAAATGTTCACACTGAAGCGGACGCGTGGGCGG]
consensusID : consensus_7704#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 113 fasta sequence
[CCGCCCACGCGTCCGAAAACACTGGATGTGAGATGAGATGGTTGTGACGGTTAAAATTGTTGTAATTTATCCAATGTAATCTCACCGTATCAAGAAAATACAATTACTCAAGC]
[+] EMBL BM618058 [CCGCCCACGCGTCCGAAAACACTGGATGTGAGATGAGATGGTTGTGACGGTTAAAATTGTTGTAATTTATCCAATGTAATCTCACCGTATCAAGAAAATACAATTACTCAAGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7704#0 TTTTTGCTTGAGTAATTGTATTTTCTTGATACGGTGAGATTACATTGGATAAATTACAAC 60
consensus_7704#1 ---CCGCCCACGCGTCCGAAAACACTGGATGTGAGATGAGATGGTTGTGACGGTTAAAAT 57
** * * * ** *** * ** *** *** **
consensus_7704#0 AATTTTAACCGTCACAACCATGTCTTCTCTCATCCCAAAAGTCCTCCGTATCACATAAAA 120
consensus_7704#1 TGTTGTAATTTATCCAATGTAATCTCACCGTATCAAGAAAATACA----ATTACTCAAGC 113
** *** *** *** * *** *** * * ** ** **
consensus_7704#0 AGCCGTCCCACTTTCGGTACGTGTCCTGCACACGCTTCGAACTGTTACGACTGTTTGGTA 180
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 AGGATTAGGCGAATAAATAAAACTTTTCGTAACGTTGCAATATGCCTGCCTGTGTGTCTC 240
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 GTTAGTACACTGTGCGCTCTTCTTCTTGCGCGTCTTTGCTTTTGCTGAATTGAAATCTCT 300
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 TTTCTTTCCTTCCCTAATATATCCTAAGTCATCTGTTTCGCATGCCTTTTTGTGTAGCTA 360
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 CACTGCCCTACTATACGTCTTACTGTCCTTGCGAAATCGGCAAGGATTAGTTTGCTGTTG 420
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 GATCCAACAGCCTTACAACTAACCCATTTTCCATACCTGATGCTTCCCTAATATCCTGGA 480
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 TTAATCCTAACGTAAATCTGGCTCATAAATTAGCTTCAATTCCCTAGCGATAGTGAGTAC 540
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 TCCTATGCGTGTTAAATACAATAGCGTTCGCGAACTCGCTGTACCAAAACGGGGGAACTC 600
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 GTAATACTTTTGCGTTTACTGAAACGGCTTCCTACCTCCCCCGCTTACGCCGTTTGGAGA 660
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 TGCTGCAGGGACGCGTTACACCATACGCTCCTTAGCACTGCACAAATCAACAAACACATA 720
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 GTTCTTCGATTATGCTGCCACTGTAGCTGCAGCTTCGAAGGATAATACTTTTCGATGCAT 780
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 CGATTTTGGCCACTCCGTTTGCTTTCTTATGGCGTTGTGCTTTTGCGTGAAATTTCGATA 840
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 TCCTGGTATTAGGAACTGTTGCACGCATTTCTACTTTGCCGCTCCTGGTCGCGTATGCGT 900
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 CGGCATGCGGTGTTGTTTGTGCGCCTTTTTCACCGGGCAGCACCTCCGTTCTAACCGATG 960
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 ACCCAGCGTGTAAAACTTAATTATGTCAAGTGTGTGTTACCTCTCTCTGAAAATCATCCG 1020
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 ATACGGTTGACTAGAATTGTACCACAACGCACTGACGCTTTTAAAACAAAACACAAATTA 1080
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 AACCGAAACAGAAAAAAATCCTACACATTTTAGAACGGAACCGTTGGTGCACGCTGCCCA 1140
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 CAAACGGAGCGTATGCACTTTTCCGTGCACTTTCCGCAACCCGTGCTACCGATAGGACGG 1200
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 TAGCCGTTTGGAAGCGGTTTCTACACGCCGCCCGAAATCTGTTCCTCCTTGCACTGGGCC 1260
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 AGCGAGCGGACCGATACGCGCGAACGTATCGAACGGTTGAGCATGCTCGAACGCAGCTCA 1320
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 CCACGGGTCGATGCCCGCAGGGACGCTCCGATCGAGGTCTTGGACGTGGCACGGGTAAAT 1380
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 CGCTCCACGGGCAGATCGTCGCAGGTATCGTCGTCATCCACTTTCTTCGTGAGACAGGGG 1440
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 AAGTCCCAGATCTTTTGCCCTCGTCCGAATTCTTCACCATCGGCAAGAGTTTGCGGCAGG 1500
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 TCGTGTCCAAGTGTTTCGGGCAGCAGCAGGGACAGCAGTCCCCCGAAGATACCCAAAATG 1560
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 CCCAGCACTATCAGCGGCAGAGAGGGCGAGATGTTGGCCAGATAGACGACGAACGGTGCC 1620
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 ACAATGCTCGCAACGTAGCCCATGATGTGGATGAACGCGACGCCCTGCGCCCGGACGACG 1680
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 GTCGGCAGCAGCTCGGCCGCGTACTGTAGCCCAATGTTGTACGAAATGTTCACACTGAAG 1740
consensus_7704#1 ------------------------------------------------------------
consensus_7704#0 CGGACGCGTGGGCGG 1755
consensus_7704#1 ---------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||