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Anopheles gambiae
cluster # 7711 cluster # 7711       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7711#0 length = 1110 sequences # 1  
consensus_7711#1 length = 759 sequences # 4  
consensus_7711#2 length = 710 sequences # 2  
consensus_7711#3 length = 644 sequences # 1  

consensusID : consensus_7711#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1110
fasta sequence
                              [GCGGTTAATTGCAAAGCTACGATGCCTTGCCCAAGCGCAATTTAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCGCAAACTTTANAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCATATTTCATCCTGCAACATTAACATATATAAAACAGCTGAACACCAACACTATTTCCTGCCAGCCCATCGCAATGGAGACATCAACTGGTTGTGCAAGTTATATAACAGCATACCCATCAAATCGTACACCANATATGTGGAAGCATTCCATANAGGACTCTCCAGCATATGGGTTCTCCAANAATAACNCATATTCATGTTGGGCACTGGAACAAAACAGGTNANTTACTGGCAAACTCCTTANNTCTTTCACAGGCNTATCCTATAACAACATAAACACTCCTAACCATTGGCGATAATAAAGAGGCCTNCTGACGTACGAAATAATANATGTCACAACCACANTATGCCACCCATGCTCCGTTCANTGANCGGCAGTTGNAGTTNTTAGAACAGTACACNGTNAGTAACACNACAACTAATTACCTAGACANGGATANTNTACCAACAATGGTGGATCCAAAAAACACAAACCCCGGCTNACACACAAAACAACAGGAGGGAANAANAACCACAACACTAGCGNACTACGGCGGCACACGGTAAANTATCNCGCGACNTGTACAATTTCCACAACCAGCCTACGACCTTTNACACAANNACCAAATATCNCGCCCACCACNANTGCCAGCACCAGCGATTNACNAACACNAACATATCAACCANAANACCCCCCACTCATNACCCCTAACTTCAACACCACAACCNANCAANAACCAATTTTCAAAACANCANANTCCATCNATAAAAAATANANAAGCACCCTATCTATAACGATACAATTANCACCAAATCTNNAACCACATTGCAACNCACAACCCCCCCGCGCATCATTTAAAACACTAAATATCATATNNGCTAAAANAAANAATATANCAGNNTTCCCTCAAAAACTTNNACCCCAATACAACTTACAATCAACCTATCCGGANCANACTACAATTTAATTANAAAAAACAACAANCAGCTA]

[+] EMBL AL695354             [GCGGTTAATTGCAAAGCTACGATGCCTTGCCCAAGCGCAATTTAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCGCAAACTTTANAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCATATTTCATCCTGCAACATTAACATATATAAAACAGCTGAACACCAACACTATTTCCTGCCAGCCCATCGCAATGGAGACATCAACTGGTTGTGCAAGTTATATAACAGCATACCCATCAAATCGTACACCANATATGTGGAAGCATTCCATANAGGACTCTCCAGCATATGGGTTCTCCAANAATAACNCATATTCATGTTGGGCACTGGAACAAAACAGGTNANTTACTGGCAAACTCCTTANNTCTTTCACAGGCNTATCCTATAACAACATAAACACTCCTAACCATTGGCGATAATAAAGAGGCCTNCTGACGTACGAAATAATANATGTCACAACCACANTATGCCACCCATGCTCCGTTCANTGANCGGCAGTTGNAGTTNTTAGAACAGTACACNGTNAGTAACACNACAACTAATTACCTAGACANGGATANTNTACCAACAATGGTGGATCCAAAAAACACAAACCCCGGCTNACACACAAAACAACAGGAGGGAANAANAACCACAACACTAGCGNACTACGGCGGCACACGGTAAANTATCNCGCGACNTGTACAATTTCCACAACCAGCCTACGACCTTTNACACAANNACCAAATATCNCGCCCACCACNANTGCCAGCACCAGCGATTNACNAACACNAACATATCAACCANAANACCCCCCACTCATNACCCCTAACTTCAACACCACAACCNANCAANAACCAATTTTCAAAACANCANANTCCATCNATAAAAAATANANAAGCACCCTATCTATAACGATACAATTANCACCAAATCTNNAACCACATTGCAACNCACAACCCCCCCGCGCATCATTTAAAACACTAAATATCATATNNGCTAAAANAAANAATATANCAGNNTTCCCTCAAAAACTTNNACCCCAATACAACTTACAATCAACCTATCCGGANCANACTACAATTTAATTANAAAAAACAACAANCAGCTA]


>consensus_7711#0 GCGGTTAATTGCAAAGCTACGATGCCTTGCCCAAGCGCAATTTAAAACCAAAAATAAGGT TCAAAGTGTCGCAAACAAAACTTTCGCAAACTTTANAGAAACTAAAAAAACCACTAGAAT TGACAAATAGTTCGGGAGCATATTTCATCCTGCAACATTAACATATATAAAACAGCTGAA CACCAACACTATTTCCTGCCAGCCCATCGCAATGGAGACATCAACTGGTTGTGCAAGTTA TATAACAGCATACCCATCAAATCGTACACCANATATGTGGAAGCATTCCATANAGGACTC TCCAGCATATGGGTTCTCCAANAATAACNCATATTCATGTTGGGCACTGGAACAAAACAG GTNANTTACTGGCAAACTCCTTANNTCTTTCACAGGCNTATCCTATAACAACATAAACAC TCCTAACCATTGGCGATAATAAAGAGGCCTNCTGACGTACGAAATAATANATGTCACAAC CACANTATGCCACCCATGCTCCGTTCANTGANCGGCAGTTGNAGTTNTTAGAACAGTACA CNGTNAGTAACACNACAACTAATTACCTAGACANGGATANTNTACCAACAATGGTGGATC CAAAAAACACAAACCCCGGCTNACACACAAAACAACAGGAGGGAANAANAACCACAACAC TAGCGNACTACGGCGGCACACGGTAAANTATCNCGCGACNTGTACAATTTCCACAACCAG CCTACGACCTTTNACACAANNACCAAATATCNCGCCCACCACNANTGCCAGCACCAGCGA TTNACNAACACNAACATATCAACCANAANACCCCCCACTCATNACCCCTAACTTCAACAC CACAACCNANCAANAACCAATTTTCAAAACANCANANTCCATCNATAAAAAATANANAAG CACCCTATCTATAACGATACAATTANCACCAAATCTNNAACCACATTGCAACNCACAACC CCCCCGCGCATCATTTAAAACACTAAATATCATATNNGCTAAAANAAANAATATANCAGN NTTCCCTCAAAAACTTNNACCCCAATACAACTTACAATCAACCTATCCGGANCANACTAC AATTTAATTANAAAAAACAACAANCAGCTA



consensusID : consensus_7711#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 759
fasta sequence
                              [TTTGGAAAATTAAGATCTGAAAGTCATGAGTAATTTCCATTGTGCTGGTTATGATTCACTGTCACCTTGTATCTGTCATTTAGT--AATCACCCGAGG-ATCATTGCAAAAGCTACGAT-GCCTTGCCCCAAGCGCAAGT-TAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCGCAAACTTTAAAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCATTTTCATCCTGCAACATTAACATTATAAAACAGCTGAACACCAACACTTTTCCGCAGCCCATCGAATGGAGACATAACTGGTTGGAAGTTTTTAAAGATACCATCACTCGTCACAATTGGGAAGCATTCATAAGGACTCTCAGATTGGCTTCTCAAAATAACACATTTTGT-GGCCTGGACAACGTATTACGGAACTCTTTCTTAAGCATTCTTACACATAAAATCTACATGGATATAAAAGCCTTGCGTTTATATTTGTACACAATTGCACCATGTCGTAATGAGCATGATATAGAATTTTGTATTAAAACTATACTGCGGATATTCAATGGCGATCAAAACAAACCCGTACAAAAAAACGGACGGAAAAACACATAGATACNCGCAAGTAATTCGGATG-TTATTCAAAGCTAAAATAACAAATTCGCCACAAATGACAGGTTCACAAATTACCAATACA-TTACTATTACAAAGCAAACTTAACCATCTTTAATTTAGCTTTAACTATNCCATTGAATGATCACC]

[+] EMBL BX624012             [TTTGGAAAATTAAGATCTGAAAGTCATGAGTAATTTCCATTGTGCTGGTTATGATTCACTGTCACCTTGTATCTGTCATTTAGTGAAATCAAC  AGC ATCATTGCAAAAGCTACGAT GCCTTGCCCCAAGCGCAAGT TAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCGCAAACTTTAAAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCATTTTCATCCTGCAACATTAACATTATAAAACAGCTGAACACCAACACTTTTCCGCAGCCCATCGAATGGAGACATAACTGGTTGGAAGTTTTTAAAGATACCATCACTCGTCACAATTGGGAAGCATTCATAAGGACTCTCAGATTGGCTTCTCAAAATAACACATTTTGT GGCCTGGACAACGTATTACGGAACTCTTTCTTAAGCATTCTTACACATAAAATCTACATGGATATAAAAGCCTTGCGTTTATATTTGTACACAATTGCACCATGTCGTAATGAGCATGATATAGAATTTTGTATTAAAACTATAC                                                                                                                                                                                                                   ]
[+] EMBL AL934632             [                                                                                      AATCGCCCGAGGNATCATTGCAAAAGCTACGAT GCCTT CCCCAAGCGCAAGT TAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCGCAAACTTTAAAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCATTTTCATCCTGCAACATTAACATTATAAAACAGCTGAACACCAACACTTTTCCGCAGCCCATCGAATGGAGACATAACTGGTTGGAAGTTTTTAAAGATACCATCACTCGTCACAATTGGGAAGCATTCATAAGGACTCTCAGATTGGCTTCTCAAAATAACACATTTTGT GGCCTGGACAACGTATTACGGAACTCTTTCTTAAGCATTCTTACACATAAAATCTACATGGATATAAAAGCCTTGCGTTTATATTTGTACACAATTGCACCATGTCGTAATGAGCATGATATAGAA TTTGTATTAAAACTATACTGCGGATATTCAATGGCGATCAAAACAAACCCGTACAAAAAAACGGACGGAAAAACACATAGATACNCGCAAGTAATTCGGATG TTATTCAAAGCTAAAATAACAAATTCGCCACAAATGACAGGTTCACAAATTACCAATACA TTACTATTACAAAGCAAACTTAACCA                                       ]
[+] EMBL AL932479             [                                                                                          cCCCGAGG AT ATTGCAAAAGCTACGAT GCCTTGCCCCAAGCGCAAGT TAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCGCAAACTTTAAAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCATTTTCATCCTGCAACATTAACATTATAAAACAGCTGAACACCAACACTTTTCCGCAGCCCATCGAATGGAGACATAACTGGTTGGAAGTTTTTAAAGATACCATCACTCGTCACAATTGGGAAGCATTCATAAGGACTCTCAGATTGGCTTCTCAAAATAACACATTTTGTCGGCCT GACAACGTATTACGGAACTCTTTCTTAAGCATTCTTACACATAAAATCTACATGGATATAAAAGCCTTGCGTTTATATTTGTACACAATTGCACCATGTCGTAATGAGCATGATATAGAATTTTGTATTAAAACTATACTGCGGATATTCAATGGCGATCAAAACAAACCCGTACAAAAAAACGGA GGAAAAACA ATAGATA GCGCAAGTAATTCGGATGTTTATTCAAAGCT AAATAACAAATTCG CAC AATGAGAGGTTCAC AATTA CGATACATTTACTATTACAAAGCAAACTTAACCATCTTTAATTTAGCTTTAACTATNCCATTGAATGATCACC]
[+] EMBL BX624325             [                                                                                                                 acaGATNGCCTTGCCCCAAGCGCAAGTATAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCGCAAACTTTAAAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCATTTTCATCCTGCAACATTAACATTATAAAACAGCTGAACACCAACACTTTTCCGCAGCCCATCGAATGGAGACATAACTGGTTGGAAGTTTTTAAAGATACCATCACTCGTCACAATTGGGAAGCATTCATAAGGACTCTCAGATTGGCTTCTCAAAATAACACATTTTGT GGCCTGGACAACGTATTACGGAACTCTTTCTTAAGCATTCTTACACATAAAATCTACATGGATATAAAAGCNTTGCGTTTATATNTGTACACAATTGCACCATGTCGTAATGAGCATGATATAGANTTTTGTATTAAAACTATACTGCGGA                                                                                                                                                                                                             ]


>consensus_7711#1 TTTGGAAAATTAAGATCTGAAAGTCATGAGTAATTTCCATTGTGCTGGTTATGATTCACT GTCACCTTGTATCTGTCATTTAGTAATCACCCGAGGATCATTGCAAAAGCTACGATGCCT TGCCCCAAGCGCAAGTTAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCG CAAACTTTAAAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCATTTTCA TCCTGCAACATTAACATTATAAAACAGCTGAACACCAACACTTTTCCGCAGCCCATCGAA TGGAGACATAACTGGTTGGAAGTTTTTAAAGATACCATCACTCGTCACAATTGGGAAGCA TTCATAAGGACTCTCAGATTGGCTTCTCAAAATAACACATTTTGTGGCCTGGACAACGTA TTACGGAACTCTTTCTTAAGCATTCTTACACATAAAATCTACATGGATATAAAAGCCTTG CGTTTATATTTGTACACAATTGCACCATGTCGTAATGAGCATGATATAGAATTTTGTATT AAAACTATACTGCGGATATTCAATGGCGATCAAAACAAACCCGTACAAAAAAACGGACGG AAAAACACATAGATACNCGCAAGTAATTCGGATGTTATTCAAAGCTAAAATAACAAATTC GCCACAAATGACAGGTTCACAAATTACCAATACATTACTATTACAAAGCAAACTTAACCA TCTTTAATTTAGCTTTAACTATNCCATTGAATGATCACC



consensusID : consensus_7711#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 710
fasta sequence
                              [CCGCGGACGCGTGGGTGCAAAAGCTACGATGCCTTGCCCCAAGCGCAAGTTAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCGCAAACTTTAAAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCATTTTCATCCTGCAACATTAACATTATAAAACAGCTGAACACCAACACTTTTCCGCAGCCCATCGAATGGAGACATAACTGGTTGGAAGTTTTTAAAGATACCATCACTCGTCACAATTGGGAAGCATTCATAAGGACTCTCAGATTGGCTTCTCAAAATAACACATTTTGTGGCCTGGACAACGTATTACGGAACTCTTTCTTAAGCATTCTTACACATAAAATCTACATGGATATAAAAGCCTTGCGTTTATATTTGTACACAATTGCACCATGTCGTAATGAGCATGATATAGAATTTTGTATTAAAACTATACTGCGGATATTCAATGGCGATCAAAACAAACCCGTACAAAAAAACGGAGGAAAAACAATAGATAGCGCAAGTAATTCGGATGTTATTCAAAGCTAAATAACAAATTCGCACAATGAGAGGTTCACAATTACGATACATTTACTATTACAAAGCAAACTTAACCATCTTTAATTTAGCTTTAATATACAATTGAGATGATCAACCGGTAAAAAAAAAAAAAAAAGGCCACATGTGCTCGGGCGGGTTT]

[+] EMBL BM603574             [CCGCGGACGCGTGGGTGCAAAAGCTACGATGCCTTGCCCCAAGCGCAAGTTAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCGCAAACTTTAAAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCATTTTCATCCTGCAACATTAACATTATAAAACAGCTGAACACCAACACTTTTCCGCAGCCCATCGAATGGAGACATAACTGGTTGGAAGTTTTTAAAGATACCATCACTCGTCACAATTGGGAAGCATTCATAAGGACTCTCAGATTGGCTTCTCAAAATAACACATTTTGTGGCCTGGACAACGTATTACGGAACTCTTTCTTAAGCATTCTTACACATAAAATCTACATGGATATAAAAGCCTTGCGTTTATATTTGTACACAATTGCACCATGTCGTAATGAGCATGATATAGAATTTTGTATTAAAACTATACTGCGGATATTCAATGGCGATCAAAACAAAC                                                                                                                                                                                                                        ]
[+] EMBL CNS090IA             [                   AAAGCTACGATGCCTTGCCCCAAGCGCAAGTTAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCGCAAACTTTAAAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCATTTTCATCCTGCAACATTAACATTATAAAACAGCTGAACACCAACACTTTTCCGCAGCCCATCGAATGGAGACATAACTGGTTGGAAGTTTTTAAAGATACCATCACTCGTCACAATTGGGAAGCATTCATAAGGACTCTCAGATTGGCTTCTCAAAATAACACATTTTGTGGCCTGGACAACGTATTACGGAACTCTTTCTTAAGCATTCTTACACATAAAATCTACATGGATATAAAAGCCTTGCGTTTATATTTGTACACAATTGCACCATGTCGTAATGAGCATGATATAGAATTTTGTATTAAAACTATACTGCGGATATTCAATGGCGATCAAAACAAACCCGTACAAAAAAACGGAGGAAAAACAATAGATAGCGCAAGTAATTCGGATGTTATTCAAAGCTAAATAACAAATTCGCACAATGAGAGGTTCACAATTACGATACATTTACTATTACAAAGCAAACTTAACCATCTTTAATTTAGCTTTAATATACAATTGAGATGATCAACCGGTAAAAAAAAAAAAAAAAGGCCACATGTGCTCGGGCGGGTTT]


>consensus_7711#2 CCGCGGACGCGTGGGTGCAAAAGCTACGATGCCTTGCCCCAAGCGCAAGTTAAAACCAAA AATAAGGTTCAAAGTGTCGCAAACAAAACTTTCGCAAACTTTAAAGAAACTAAAAAAACC ACTAGAATTGACAAATAGTTCGGGAGCATTTTCATCCTGCAACATTAACATTATAAAACA GCTGAACACCAACACTTTTCCGCAGCCCATCGAATGGAGACATAACTGGTTGGAAGTTTT TAAAGATACCATCACTCGTCACAATTGGGAAGCATTCATAAGGACTCTCAGATTGGCTTC TCAAAATAACACATTTTGTGGCCTGGACAACGTATTACGGAACTCTTTCTTAAGCATTCT TACACATAAAATCTACATGGATATAAAAGCCTTGCGTTTATATTTGTACACAATTGCACC ATGTCGTAATGAGCATGATATAGAATTTTGTATTAAAACTATACTGCGGATATTCAATGG CGATCAAAACAAACCCGTACAAAAAAACGGAGGAAAAACAATAGATAGCGCAAGTAATTC GGATGTTATTCAAAGCTAAATAACAAATTCGCACAATGAGAGGTTCACAATTACGATACA TTTACTATTACAAAGCAAACTTAACCATCTTTAATTTAGCTTTAATATACAATTGAGATG ATCAACCGGTAAAAAAAAAAAAAAAAGGCCACATGTGCTCGGGCGGGTTT



consensusID : consensus_7711#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 644
fasta sequence
                              [GGAGCATTTTCATCCTGCAACATTAACATTATAAAACAGCTGAACACCAACACTTTTCCGCAGCCCATCGAATGGAGACATAACTGGTTGGAAGTTTTTAAAGATACCATCACTCGTCACAATTGGGAAGCATTCATAAGGACTCTCAGATTGGCTTCTCAAAATAACACATTTTGTGGCCTGGACAACGTATTACGGGTTTGTTAACGATAATAATGAAAGCTTAATTTCATATTTTTAACATACACTATTTTTCTTACAGAACTCTTTCTTAAGCATTCTTACACATAAAATCTACATGGATATAAAAGCCTTGCGTTTATATTTGTACACAATTGCACCATGTCGTAATGAGCATGATATAGAATTTTGTATTAAAACTATACTGCGGATATTCAATGGCGATCAAAACAAACCCGTACAAAAAAACGGAGGAAAAACAATAGATAGCGCAAGTAATTCGGATGTTATTCAAAGCTAAATAACAAATTCGCACAATGAGAGGTTCACAATTATGATACATTTACTATTACAAAGCAAACTTAACCATCTTTAATTTAGCTTTAATATACAATTGAGATGATCAACCGGTATTAACTATTTTTGTAATATTTCGTCCTAAAATACCTTATTATTATTGTTAT]

[+] EMBL BX611819             [GGAGCATTTTCATCCTGCAACATTAACATTATAAAACAGCTGAACACCAACACTTTTCCGCAGCCCATCGAATGGAGACATAACTGGTTGGAAGTTTTTAAAGATACCATCACTCGTCACAATTGGGAAGCATTCATAAGGACTCTCAGATTGGCTTCTCAAAATAACACATTTTGTGGCCTGGACAACGTATTACGGGTTTGTTAACGATAATAATGAAAGCTTAATTTCATATTTTTAACATACACTATTTTTCTTACAGAACTCTTTCTTAAGCATTCTTACACATAAAATCTACATGGATATAAAAGCCTTGCGTTTATATTTGTACACAATTGCACCATGTCGTAATGAGCATGATATAGAATTTTGTATTAAAACTATACTGCGGATATTCAATGGCGATCAAAACAAACCCGTACAAAAAAACGGAGGAAAAACAATAGATAGCGCAAGTAATTCGGATGTTATTCAAAGCTAAATAACAAATTCGCACAATGAGAGGTTCACAATTATGATACATTTACTATTACAAAGCAAACTTAACCATCTTTAATTTAGCTTTAATATACAATTGAGATGATCAACCGGTATTAACTATTTTTGTAATATTTCGTCCTAAAATACCTTATTATTATTGTTAT]


>consensus_7711#3 GGAGCATTTTCATCCTGCAACATTAACATTATAAAACAGCTGAACACCAACACTTTTCCG CAGCCCATCGAATGGAGACATAACTGGTTGGAAGTTTTTAAAGATACCATCACTCGTCAC AATTGGGAAGCATTCATAAGGACTCTCAGATTGGCTTCTCAAAATAACACATTTTGTGGC CTGGACAACGTATTACGGGTTTGTTAACGATAATAATGAAAGCTTAATTTCATATTTTTA ACATACACTATTTTTCTTACAGAACTCTTTCTTAAGCATTCTTACACATAAAATCTACAT GGATATAAAAGCCTTGCGTTTATATTTGTACACAATTGCACCATGTCGTAATGAGCATGA TATAGAATTTTGTATTAAAACTATACTGCGGATATTCAATGGCGATCAAAACAAACCCGT ACAAAAAAACGGAGGAAAAACAATAGATAGCGCAAGTAATTCGGATGTTATTCAAAGCTA AATAACAAATTCGCACAATGAGAGGTTCACAATTATGATACATTTACTATTACAAAGCAA ACTTAACCATCTTTAATTTAGCTTTAATATACAATTGAGATGATCAACCGGTATTAACTA TTTTTGTAATATTTCGTCCTAAAATACCTTATTATTATTGTTAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7711#2      ------------------------------------------------------------
consensus_7711#3      ------------------------------------------------------------
consensus_7711#1      TTTGGAAAATTAAGATCTGAAAGTCATGAGTAATTTCCATTGTGCTGGTTATGATTCACT 60
consensus_7711#0      ------------------------------------------------------------
                                                                                  

consensus_7711#2      --------------------------CCGCGGACGCGTGGGTGCAAAAGCTACGATGCCT 34
consensus_7711#3      ------------------------------------------------------------
consensus_7711#1      GTCACCTTGTATCTGTCATTTAGTAATCACCCGAGGATCATTGCAAAAGCTACGATGCCT 120
consensus_7711#0      ---------------------------------GCGGTTAATTGCAAAGCTACGATGCCT 27
                                                                                  

consensus_7711#2      TGCCCCAAGCGCAAGTTAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCG 94
consensus_7711#3      ------------------------------------------------------------
consensus_7711#1      TGCCCCAAGCGCAAGTTAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCG 180
consensus_7711#0      TGCCC-AAGCGCAATTTAAAACCAAAAATAAGGTTCAAAGTGTCGCAAACAAAACTTTCG 86
                                                                                  

consensus_7711#2      CAAACTTTAAAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCAT-TTTC 153
consensus_7711#3      ------------------------------------------------GGAGCAT-TTTC 11
consensus_7711#1      CAAACTTTAAAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCAT-TTTC 239
consensus_7711#0      CAAACTTTANAGAAACTAAAAAAACCACTAGAATTGACAAATAGTTCGGGAGCATATTTC 146
                                                                      ******* ****

consensus_7711#2      ATCCTGCAACATTAACAT-TATAAAACAGCTGAACACCAACACTTTTCCG---CAGCCCA 209
consensus_7711#3      ATCCTGCAACATTAACAT-TATAAAACAGCTGAACACCAACACTTTTCCG---CAGCCCA 67
consensus_7711#1      ATCCTGCAACATTAACAT-TATAAAACAGCTGAACACCAACACTTTTCCG---CAGCCCA 295
consensus_7711#0      ATCCTGCAACATTAACATATATAAAACAGCTGAACACCAACACTATTTCCTGCCAGCCCA 206
                      ****************** ************************* ** *    *******

consensus_7711#2      TCG-AATGGAGACAT-AACTGGTTG-GAAGTTTTTAAAG----ATACC------ATCACT 256
consensus_7711#3      TCG-AATGGAGACAT-AACTGGTTG-GAAGTTTTTAAAG----ATACC------ATCACT 114
consensus_7711#1      TCG-AATGGAGACAT-AACTGGTTG-GAAGTTTTTAAAG----ATACC------ATCACT 342
consensus_7711#0      TCGCAATGGAGACATCAACTGGTTGTGCAAGTTATATAACAGCATACCCATCAAATCGTA 266
                      *** *********** ********* * *  ** ** *     *****      ***   

consensus_7711#2      CGTCACAATTG-GGAAGCATTC-ATAA-GGACTCTCAGAT---TGGCTTCTC--AAAATA 308
consensus_7711#3      CGTCACAATTG-GGAAGCATTC-ATAA-GGACTCTCAGAT---TGGCTTCTC--AAAATA 166
consensus_7711#1      CGTCACAATTG-GGAAGCATTC-ATAA-GGACTCTCAGAT---TGGCTTCTC--AAAATA 394
consensus_7711#0      CACCANATATGTGGAAGCATTCCATANAGGACTCTCCAGCATATGGGTTCTCCAANAATA 326
                      *  ** *  ** ********** ***  ********       *** *****  * ****

consensus_7711#2      ACACAT-TTTGTGGCCTGGAC-AACGTATTACGG-------------------------- 340
consensus_7711#3      ACACAT-TTTGTGGCCTGGAC-AACGTATTACGGGTTTGTTAACGATAATAATGAAAGCT 224
consensus_7711#1      ACACAT-TTTGTGGCCTGGAC-AACGTATTACGG-------------------------- 426
consensus_7711#0      ACNCATATTCATGTTGGGCACTGGAACAAAACAGGTNANTTACTGGCAAACTCCTTANNT 386
                      ** *** **  **    * **      *  ** *                          

consensus_7711#2      --------------------------------------AACTCTT-----TCTTAAGCAT 357
consensus_7711#3      TAATTTCATATTTTTAACATACACTATTTTTCTTACAGAACTCTT-----TCTTAAGCAT 279
consensus_7711#1      --------------------------------------AACTCTT-----TCTTAAGCAT 443
consensus_7711#0      CTTTCACAGGCNTATCCTATAACAACATAAACACTCCTAACCATTGGCGATAATAAAGAG 446
                                                            ***  **     *  ***  * 

consensus_7711#2      TCTTAC--ACATAAAATCTACATGGATATAAAAGCCTTGCGTTTATATTTGTACACAATT 415
consensus_7711#3      TCTTAC--ACATAAAATCTACATGGATATAAAAGCCTTGCGTTTATATTTGTACACAATT 337
consensus_7711#1      TCTTAC--ACATAAAATCTACATGGATATAAAAGCCTTGCGTTTATATTTGTACACAATT 501
consensus_7711#0      GCCTNCTGACGTACGAAATA-ATANATGTCACAACCACANTATGCCACCCATGCTCCGTT 505
                       * * *  ** **  *  ** **  ** * * * **      *   *    * * *  **

consensus_7711#2      GCACCATGTCGTAATGAGCATGATATAGAATTTTGTATTAAAACTA-TACTGCGGATATT 474
consensus_7711#3      GCACCATGTCGTAATGAGCATGATATAGAATTTTGTATTAAAACTA-TACTGCGGATATT 396
consensus_7711#1      GCACCATGTCGTAATGAGCATGATATAGAATTTTGTATTAAAACTA-TACTGCGGATATT 560
consensus_7711#0      -CANTGANCGGCAGTTGNAGTTNT-TAGAACAGTACACNGTNAGTAACACNACAACTAAT 563
                       **       * * *     *  * *****   *  *     * **  **  *   ** *

consensus_7711#2      CAAT--GGCGATCAAAACAAACCCGTACAAAAAAACGGA-GGAA---AAACA-ATAGATA 527
consensus_7711#3      CAAT--GGCGATCAAAACAAACCCGTACAAAAAAACGGA-GGAA---AAACA-ATAGATA 449
consensus_7711#1      CAAT--GGCGATCAAAACAAACCCGTACAAAAAAACGGACGGAA---AAACACATAGATA 615
consensus_7711#0      TACCTAGACANGGATANTNTACCAACAATGGTGGATCCAAAAAACACAAACCCCGGCTNA 623
                       *    * *    * *    ***   *       *   *   **   ****        *

consensus_7711#2      -GCGCAAGTAATTCGGATGTTATTCAAAGCTAAA---TAACAAATTC--GC-ACAA-TGA 579
consensus_7711#3      -GCGCAAGTAATTCGGATGTTATTCAAAGCTAAA---TAACAAATTC--GC-ACAA-TGA 501
consensus_7711#1      CNCGCAAGTAATTCGGATGTTATTCAAAGCTAAAA--TAACAAATTC--GCCACAAATGA 671
consensus_7711#0      CACACAAAACAACAGGAGGGAANAANAACCACAACACTAGCGNACTACGGCGGCACACGG 683
                        * ***   *   *** *  *    ** *  **   ** *  * *   **  **   * 

consensus_7711#2      GAGGTTCACAA-TTAC-GATACATTTACTATTACAAA---GCAAACTTAACCATCTTTAA 634
consensus_7711#3      GAGGTTCACAA-TTAT-GATACATTTACTATTACAAA---GCAAACTTAACCATCTTTAA 556
consensus_7711#1      CAGGTTCACAAATTACCAATACATT-ACTATTACAAA---GCAAACTTAACCATCTTTAA 727
consensus_7711#0      TAAANTATCNCGCGACNTGTACAATTTCCACAACCAGCCTACGACCTTTNACA-CAANNA 742
                       *   *  *     *    **** *  * *  ** *     * * ***   ** *    *

consensus_7711#2      TTTAGCTTTAA-TATACAATTGAGATGATCAACCGGTAAAAAAAA-------AAAAAAAA 686
consensus_7711#3      TTTAGCTTTAA-TATACAATTGAGATGATCAACCGGTATTAACTATTTTTGTAATATTTC 615
consensus_7711#1      TTTAGCTTTAACTATNCCATTGA-ATGATCACC--------------------------- 759
consensus_7711#0      CCAAATATCNCGCCCACCACNANTGCCAGCACCAGCGATTNACNAACACNAACATATCAA 802
                         *   *        * *        * ** *                           

consensus_7711#2      GGCCACATGTGCTCGGGCGGGTTT------------------------------------ 710
consensus_7711#3      GTCCTAAAATACCTTATTATTATTGTTAT------------------------------- 644
consensus_7711#1      ------------------------------------------------------------
consensus_7711#0      CCANAANACCCCCCACTCATNACCCCTAACTTCAACACCACAACCNANCAANAACCAATT 862
                                                                                  

consensus_7711#2      ------------------------------------------------------------
consensus_7711#3      ------------------------------------------------------------
consensus_7711#1      ------------------------------------------------------------
consensus_7711#0      TTCAAAACANCANANTCCATCNATAAAAAATANANAAGCACCCTATCTATAACGATACAA 922
                                                                                  

consensus_7711#2      ------------------------------------------------------------
consensus_7711#3      ------------------------------------------------------------
consensus_7711#1      ------------------------------------------------------------
consensus_7711#0      TTANCACCAAATCTNNAACCACATTGCAACNCACAACCCCCCCGCGCATCATTTAAAACA 982
                                                                                  

consensus_7711#2      ------------------------------------------------------------
consensus_7711#3      ------------------------------------------------------------
consensus_7711#1      ------------------------------------------------------------
consensus_7711#0      CTAAATATCATATNNGCTAAAANAAANAATATANCAGNNTTCCCTCAAAAACTTNNACCC 1042
                                                                                  

consensus_7711#2      ------------------------------------------------------------
consensus_7711#3      ------------------------------------------------------------
consensus_7711#1      ------------------------------------------------------------
consensus_7711#0      CAATACAACTTACAATCAACCTATCCGGANCANACTACAATTTAATTANAAAAAACAACA 1102
                                                                                  

consensus_7711#2      --------
consensus_7711#3      --------
consensus_7711#1      --------
consensus_7711#0      ANCAGCTA 1110
                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)