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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7767#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 718 fasta sequence
[CCGCGGACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG---AAAACAAGGTTGCTAGGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAACGGTCCCAGACCGACCTG-GAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAAGG-ACGTGCCGAA-GGCGGTCGAGATCCTGTCCGACATCATCCAGCACTCGAAGCTGGGCGAGGCGGAGATAGAGCGCGAGCGGGGCGTGATCCTGCGCGAGATGCAGGATGTCGAGAGCAACCTGCAAGAGGTGGTGTTTGACCATCTGCACGC]
[+] EMBL BM614128 [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGAGAAAAACAAGGTTGCTAGGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAACGGTCCCAGACCGACCTG GAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAAGG ACGTGCCGAA GGCGGTCGAGATCCTG ]
[+] EMBL BM624638 [ CCGCCCACGCGTCCGCCCACGCGTCCG CCCACGCGTCC GGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAGCGGTCCCAGACCGACCTG GAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAAGG ACGTGCCGAA GGCGGTCGAGATCCTGTCCGACATCATCCAGCACTCGAAGCTGGGCGAGGCGGAGATAGAGCGCGAGCGGGGCG ]
[+] EMBL BM591250 [ CCGCCCACGCGTCCGCCCACGCGTCCGGA AAAACAAGGTTGCTAGGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGACAAGCGGTCCCAGACCGACCTGCGAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAAGGAACGTGCCGAA GGCGGTCGAGATCCTGTCCGACATCATCCAGCACTCGAAGCTGGGCGAGGCGGACATAGAGC ]
[+] EMBL BM607235 [ CCGCCCACGCGTCCGCCCACGCGTCCG CCCACGCGT CCGGGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAGCGGTCCCAGACCGACCTG GAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAAGG ACGTGCCGAAGGGCGGTCGAGATCCTGTCCGACATCATCCAGCACTCGAAGCTGGGC ]
[+] EMBL BM577092 [ CCGCCCACGCGTCCG AAACAAGGTTGCTAGGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAACGGTCCCAGACCGACCTG GAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAAGG ACGTGCCGAA GGCGGTCGAGATCCTGTCCGACATCATCCAGCACTCGAAGCTGGGCGAGGCGGAGATCGAGCGCGAGCGGGGCGTGATCCTGCGCGAGATGCAGGATGTCGAGAGCAACCTGCAAGAGGTGGTGTTTGACCATCTGCACGC]
[+] EMBL BM613410 [ CCGCCCACGCGTCCGGA AAAACAAGGTTGCTAGGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAACGGTCCCAGACCGACCTG GAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAA ]
consensusID : consensus_7767#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 645 fasta sequence
[CCGCAGAACCGCGACTGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCGGCCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGACCGAGCGCGTGAAGTTTGGTGGCGAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGTGGCCGTGTGTGAGAGAGTGTGTG-TGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAGCAGCACCAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTA]
[+] EMBL BM584659 [CCGCAGAACCGCGACTGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCGGCCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGACCGAGCGCGTGAAGTTTGGTGGCGAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGTGGCCGTGTGTGAGAGAGTGTGTG TGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCG ]
[+] EMBL BM593960 [ ccgGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGACCGAGCGCGTGAAGTTTGGTGGCGAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGTGGCCGTGTGTGAGAGAGTGTGTGTTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAGCAGCACCAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7767#0 CCGCGGACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAAAACAAGGTTGCTAGGGGAC 60
consensus_7767#1 ----------------------------CCGCAGAACCGCGACTGAATCGGTTACAGG-C 31
** * *** * * * ** ** *
consensus_7767#0 GTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGC 120
consensus_7767#1 GTATCGT---AGCTGCTGGTCGAGCGCGT-TTCATTACGCACTC----CTCCAAACCTCC 83
** * * * *** *** ** ** ** * ** * *** * * *
consensus_7767#0 CGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCA--ATCAATGGCCTCGCT 178
consensus_7767#1 GCGGCCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAG 143
**** ** * *** * **** ** * ** *
consensus_7767#0 GCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCT-GCTGTTCCGGC 237
consensus_7767#1 AGAGAGAGAGTGAGCGAGCGAGCGAGCGC-TGGTGCTGGGAACGAGTTTGCTGCTGTTTG 202
** * ** ** *** *** * * ** ** * **** *
consensus_7767#0 GCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCG 297
consensus_7767#1 CGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAG-CGG 261
* * * * ** * * *** * ** * *** * ** * * * *
consensus_7767#0 AGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGG 357
consensus_7767#1 AAGCGG--AAGCGAGAGAGCGACCGA------GCGCGTGAAGTTT---GGTGGCGAGCGA 310
* * * ** ** ** * * *** * **** ** * * ** **
consensus_7767#0 CAACCGTCGGGCTGTGGATCGATGCCGGCTC-GCGCTACGAGAACGACAGCAACAACGGG 416
consensus_7767#1 GAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAG 370
* * ** *** ***** * ** ** * * * ** *** *
consensus_7767#0 GTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAACGGTCCCAGACCGAC 476
consensus_7767#1 TGC-------TCGTCGTGTACCTTGTGC-----GGTGC--TCGAAGGATCAAAGATCGAT 416
* ** *** * ** * * * *** * * ** * ** *** ***
consensus_7767#0 CTGGAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAG 536
consensus_7767#1 TGCCTGCCTG-GCCCAGTAATACGGGCG------TGTGTGTGTGGCCGTGT-GTGAG-AG 467
** * * * ** * ***** ** * ** *** * *** **
consensus_7767#0 ACCGTGTTCTACGCTAAGTGCCTGTCGAAGGACGTGCCGAAGGCGGTCGAGATCCTGTCC 596
consensus_7767#1 AGTGTGTG-TGTG-TGAGTGTTTGTGAAGAAAAGCTGCGAAC-CAGCACAGGTGCGATCG 524
* **** * * * **** *** * * * **** * * ** * * **
consensus_7767#0 GACATCATCCAGCACTCGAAGCTGGGCGAGGCGGAGATAG---AGCGCGAGCGGGGCGTG 653
consensus_7767#1 TCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATT 584
* * * *** ** * * * ** * *** ** *
consensus_7767#0 ATCCTGCGCGAGATGCAGGATGTCGAGAGCAACC-TGCAAGAGGTGGTGTTTGACCATCT 712
consensus_7767#1 AGACAGAGTCAGCAGCAGCA--CCAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACA 642
* * * * ** **** * * **** ** ** ** * * * * *
consensus_7767#0 GCACGC 718
consensus_7767#1 GTA--- 645
* *
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||