cluster # 7777

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7777 cluster # 7777 Sequences # 8 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7777#0 length = 733 sequences # 3

consensus_7777#1 length = 649 sequences # 5

consensusID : consensus_7777#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 733
fasta sequence

                              [GCAGAATCGCACGAGGTGAAAGAAGGGAGGAGCGTTTGTTCTTTATTAACATAACATTTCATCCTTGAAAGATAAACATTTTACCCAGTTTCGATGCAGATCTCAAACATATTTGTTAGCAGCATTGGGATTACCCTTGTTTTGTCTAATCGTTTCTACGCACGGGTACAGGGCTACTACAGCGCGCGAAATGATTACCCAAAACCTGTGCGTTTGTCCGTGCGGC-AATCCAAGAGGA-GGAAAGCTG-TACACCACGCCAAATTTACGATTGAATTGGTTCGAT-GCCGTGTCCTACTGCAGCTCGATCGGAATGTCGATCGCTACGATAAAGGATACCAACGAGCGCCAATTATTGCAGCTTCATCT-GGACGGAGATCGAAGACTGACACGATCGCAGAAAAGAAGCAAAATACCGTACTGGATCGGAGCGAATAGTTTGATCGCCGGACAGGGGCTTCGATGGGGTCTCACTGATCAGGAGGTGAAAGAATCTGCTGAGTGGGCTGATGGGGTAGCGCCGGCCAATAATAGAGTGGAGCCATTCTGTGTTTATATACAGGGCTCTACAAT--GAGCTGGGTTGCGACTTCTTGCGATGATGAACCGAGACAATTTATTTGTGAATATTAGAAGATTAATGGGACCAATGCATAGCATTGAAAATAAACTCCTCGAATGTTTCTACCGAGAAAACGCAGAAAACAAGAGANAGAGGGNGGGAAACAGGGGCTNTTT]

[+] EMBL BX468701             [GCAGAATCGCACGAGGTGAAAGAAGGGAGGAGCGTTTGTTCTTTATTAACATAACATTTCATCCTTGAAAGATAAACATTTTACCCAGTTTCGATGCAGATCTCAAACATATTTGTTAGCAGCATTGGGATTACCCTTGTTTTGTCTAATCGTTTCTACGCACGGGTACAGGGCTACTACAGCGCGCGAAATGATTACCCAAAACCTGTGCGTTTGTCCGTGCGGCAAATCCAAGAGGAGGGAAAGCTGTTACACCACGCCAAATTTACGATTGAATTGGTTCGATGGCCGTGTCCTACTGCAGCTCGATCGGAATGTCGATCGCTACGATAAAGGATACCAACTAGCGCCAATTATTGCAGCTTCATCTGGGACGGAGATCGAAGACTGACACGATCGCAGAAAAGAAGCAAAATACCGTACTGGATCGGAGCGAATAGTTTGATCGCCGGACAGGGGCTTCGATGGGGTCTCACTGATCAGGAGGTGAAAGAATCTGCTGAGTGGGCTGATGGGGTAGCGCCGGCCAATAATAGAGTGGAGCCATTCTGTGTTTATATACAGGGCTCTACAATTGGAGCTGGGTTGCGACTTCTTGCGATGATGAACCGAGACAATTTATTTGTGAATATTAGAAGATTAATGGGACCAATGCATAGCATTGAAAATAAACTCCTCGAATGTTTCTACCGAGAAAACGCAGAAAACAAGAGANAGAGGGNGGGAAACAGGGGCTNTTT]
[+] EMBL BM647591             [                  ccgGAAGGAAGGAGCGTTTGTTCTTTATTAACATAGCATTTCATCCTTGAATGATAAACATTTTACCCAGTTTCGATGCAGATCTCAAACATATTTGTTAGCAGCATTGGGATTACCCTCG TTTGTCTAATCGTTTCTACGCACGGGTACAGGGCTACTACAGCGCGCGAAATGATTACCCAAAACCTGTGCGTTTGTCCGTGCGGC AATCCAAGAGGA GGAAAGCTG TACACTACGCCAAATTTACGATTGAATTGGTTCGAT GCCGTGTCCTACTGCAGCTCGATCGGAATGTCGATCGCTACGATAAAGGATACCAACGAGCGCCAATTATTGCAGCTTCATCT GGACGGAGATCGAAGACTGACACGATCGCAGAAAAGAAGCAAAATACCGTACTGGATCGGAGCGAATAGTTTGATCGCCGGACAGGGGCTTCGATGGGGTCTCACTGATCAGGAGGTGAAAGAATCTGCTGAGTGGGCTGATGGGGTAGCGCCGGCCAATAATAGAGTGGAGCCATTCTGTGTTTATATACAGGGCTCTACAAT  GAGCTGGGTTGCGACTTCTTGTGATGATGAACCGAGACAA                                                                                                                           ]
[+] EMBL BM641655             [                                                                                                                                                                                              ccGATTACCCAAAACCTGTGCGTTTGTCCGTGCGGC AATCCAAGAGGA GGAAAGCTG TACACCACGCCAAATTTACGATTGAATTGGTTTGAT GCCGTGTCCTACTGCAGCTCGATCGGAATGTCGATCGCTACAATAAAGGATACCAACGAGCGCCAATTATTGCAGCTTCATCT GGACGGAGATCGAAGACTGACACGATCGCAGAAAAGAAGCAAAATACCGTACTGGATCGGAGCGAATAGTTTGATCGCCGGACAGGGGCTTCGATGGGGTCTCACTGATCAGGAGGTGAAAGAATCTGCTGAGTGGGCTGATGGGATAGCGCCGGCCAATAATAGAGTGGAGCCATTCTGTGTTTATATACAGGGCTCTACAAT  GAGCTGGGTTGCGACTTCTTGCGATGATGAACCGAGACAATTTATTTGTGAATATTAGAAGATTAATGGGACCAATGCATAGCATTGAAAATAAACTCCTCGAATGTTTCTGCCGAGAAAACGC                                       ]




>consensus_7777#0
GCAGAATCGCACGAGGTGAAAGAAGGGAGGAGCGTTTGTTCTTTATTAACATAACATTTC
ATCCTTGAAAGATAAACATTTTACCCAGTTTCGATGCAGATCTCAAACATATTTGTTAGC
AGCATTGGGATTACCCTTGTTTTGTCTAATCGTTTCTACGCACGGGTACAGGGCTACTAC
AGCGCGCGAAATGATTACCCAAAACCTGTGCGTTTGTCCGTGCGGCAATCCAAGAGGAGG
AAAGCTGTACACCACGCCAAATTTACGATTGAATTGGTTCGATGCCGTGTCCTACTGCAG
CTCGATCGGAATGTCGATCGCTACGATAAAGGATACCAACGAGCGCCAATTATTGCAGCT
TCATCTGGACGGAGATCGAAGACTGACACGATCGCAGAAAAGAAGCAAAATACCGTACTG
GATCGGAGCGAATAGTTTGATCGCCGGACAGGGGCTTCGATGGGGTCTCACTGATCAGGA
GGTGAAAGAATCTGCTGAGTGGGCTGATGGGGTAGCGCCGGCCAATAATAGAGTGGAGCC
ATTCTGTGTTTATATACAGGGCTCTACAATGAGCTGGGTTGCGACTTCTTGCGATGATGA
ACCGAGACAATTTATTTGTGAATATTAGAAGATTAATGGGACCAATGCATAGCATTGAAA
ATAAACTCCTCGAATGTTTCTACCGAGAAAACGCAGAAAACAAGAGANAGAGGGNGGGAA
ACAGGGGCTNTTT

consensusID : consensus_7777#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 649
fasta sequence

                              [CCGCCCACGCGTCCGCGATCCGGCAGCGGCAGTATGCTTTACAAAGAGCGATCAGTGCAATAGATTCTTTACAAAGCACATTCATAGTGAGCAGTGAAAGAAGGGAGGAGCGTTTGTTCTTTATTAACATAACATTTCATCCTTGAAAGATAAACATTTTACCCAGTTTCGATGCAGATCTCAAACATATTTGTTAGCAGCATTGGGATTACCCTCGTTTGTCTAATCGTTTCTACGCACGGGTACAGGGCTACTACAGCGCGCGAAATGATTACCCAAAACCTGTGCGTTTGTCCGTGCGGCAATCCAAGAGGAGGAAAGCTGTACACCACGCCAAATTTACGATTGAATTGGTTCGATGCCGTGTCCTACTGCAGCTCGATCGGAATGT--CGATCGCTACGATAAAGGATACCAACGAGCGCCAATTATTGCAGCTT-CAT-CT-GGACGGAGATCGAAGACTGACACGATCGCA-GAAAAGAAGCAAAATACCGTACTGGATCGGAGCGAATAGTTTGATCGCCGGACAGGGGCTTCGATGGG-GTCTCACTGATCAGGAGGTGAAAGAATCTGCTGAGTGGGCTGATGGGGTAGCGCCGGCCAATAATAGAGTGGAGCCATTCTGTGGTTATATACAGGGCTCTACAATGA]

[+] EMBL BM635242             [CCGCCCACGCGTCCGCGATACGAGAGCGGCAGTATGCTTTACAAAGAGCGATCAGTGCAATAGATTCTTTACAAAGCACATTCATAGTGAGCAGTGAAAGAAGGGAGGAGCGTTTGTTCTTTATTAACATAACATTTCATCCTTGAAAGATAAACATTTTACCCAGTTTCGATGCAGATCTCAAACATATTTGTTAGCAGCATTGGGATTACCCTCGTTTGTCTAATCGTTTCTACGCACGGGTACAGGGCTACTACAGCGCGCGAAATGATTACCCAAAACCTGTGCGTTTGTCCGTGCGGCAATCCAAGAGGAGGAAAGCTGTACACCACGCCAAATTTACGATTGAATTGGTTTGATGCCGTGTCCTACTGCAGCTCGATCGGAATGT  CGATCGCTACAATAAAGGATACCAACGAGCGCCAATTATTGCAGCTT CAT CT GGACGGAGATCGAAGACTGACACGATCGCA GAAAAGAAGCAAAATACCGTACTGGATCGGAGCGAATAGTTTGATCGCCGGACAGGGGCTTCGATGGG GTCTCACTGATCAGGAGGTGAAAGAATCTGCTGAGTGGGCTGATGGGATAGCGCCGGCCAATAATAGAGTGGAGCCATTCTGTGGTTATATACAGGG           ]
[+] EMBL BM646588             [                   CCGG AGCGGCAGTATGCTTTACAAAGAGCGATCAGTGCAATAGATTCTTTACAAAGCACATTCATAGTGAGCAGTGAAAGAAGGGAGGAGCGTTTGTTCTTTATTAACATAACATTTCATCCTTGAAAGATAAACATTTTACCCAGTTTCGATGCAGATCTCAAACATATTTGTTAGCAGCATTGGGATTACCCTCGTTTGTCTAATCGTTTCTACGCACGGGTACAGGGCTACTACAGCGCGCGAAATGATTACCCAAAACCTGTGCGTTTGTCCGTGCGGCAATCCAAGAGGAGGAAAGCTGTACACCACGCCAAATTTACGATTGAATTGGTTTGATGCCGTGTCCTACTGCAGCTCGATCGGAATGT  CGATCGCTACAATAAAGGATACCAACGAGCGCCAATTATTGCAGCTT CAT CT GGACGGAGATCGAAGACTGACACGATCGCA GAAAAGAAGCAAAATACCGTACTGGATCGGAGCGAATAGTTTGATCGCCGGACAGGGGCTTCGATGGG GTCTCACTGATCAGGAGGTGAAAGAATCTGCTGAGTGTGCTGATGGG                                                             ]
[+] EMBL BM620243             [                      ccgGCGGCAGTATGCTTTACAAAGAGCGATCAGTGCAATAGATTCTTTACAAAGCACATTCATAGTGAGCAGTGAAAGAAGGAAGGAGCGTTTGTTCTTTATTAACATAGCATTTCATCCTTGAATGATAAACATTTTACCCAGTTTCGATGCAGATCTCAAACATATTTGTTAGCAGCATTGGGATTACCCTCGTTTGTCTGATCGTTTCTACGCACGGGTACAGGGCTACTACAGCGCGCGAAATGATTACCCAAAACCTGTGCGTTTGTCCGTGCGGCAATCCAAGAGGAGGAAAGCTGTACACTACGCCAAATTTACGATTGAATTGGTTCGATGCCGTGTCCTACTGCAGCTCGATCGGAATGT  CGATCGCTACGATAAAGGATACCAACGAGCGCCAATTATTGCAGCTT CAT CT GGACGGAGATCGAAGACTGACACGATCGCA GAAAAGAAGCAAAATACCGTACTGGATCGGAGCGAATAGTTTGATCGCCGGACAGGGGCTTCGATGGG GTCTCACTGATCAGGAGGTGAAAGAATCTGCTGAGTGGGCTGATGGGGTAGCGCCGGCCAATAATAGAGTGGAGCCATTCTGTGGTTATATACAGGGCTCTACAATGA]
[+] EMBL BM637739             [                       ccGCGGCAGTATGCTTTACAAAGAGCGATCAGTGCAATAGATTCTTTACAAAGCACATTCATAGTGAGCAGTGAAAGAAGGAAGGAGCGTTTGTTCTTTATTAACATAGCATTTCATCCTTGAATGATAAACATTTTACCCAGTTTCGATGCAGATCTCAAACATATTTGTTAGCAGCATTGGGATTACCCTCGTTTGTCTAATCGTTTCTACGCACGGGTACAGGGCTACTACAGCGCGCGAAATGATTACCCAAAACCTGTGCGTTTGTCCGTGCGGCAATCCAAGAGGAGGAAAGCTGTACACTACGCCAAATTTACGATTGAATTGGTTCGATGCCGTGTCCTACTGCAGCTCGATCGGAATGT  CGATCGCTACGATAAAGGATACCAACGAGCGCCAATTATTGCAGCTT CAT CT GGACGGAGATCGAAGACTGACACGATCGCA GAAAAGAAGC                                                                                                                                                                       ]
[+] EMBL BX619567             [                   cgagntnCGGCAGTATGCTTTACAAAGAGTGATCAGTGCAATAGATTCTTTACAAAGCACATTCATAGTGAGCAGTGAAAGAAGGGAGGAGCGTTTGTTCTTTATTAACATAACATTTCATCCTTGAAAGATAAACATTTTACCCAGTTTCGATGCAGATCTCAAACATATTTGTTAGCAGCATTGGGATTACCCTTGTTTGTCTAATCGTTTCTACGCACGGGTACAGGGCTACTACAGCGCGCGAAATGATTACCCAAAACCTGTGCGTTTGTCCGTGCGGCAATCCAAGAGGAGGAAAGCTGTACACCACGCCAAATTTACGATTGAATTGGTTCGATGCCGTGTCCTACTGCAGCTCGATCGGAATGTTCCGATCGCTACGATAAAGGATACCAACGAGCGCCAATTATTGCAGCTTCCATCCTNGGACGGAGATCGAAGACTGACACGATCGCANNAAAAGAAGCAAAATACCGTACTGGATCGGAGCGAATAGTTTGATCGCCGGACAGGGGCTTCGATGGGNGTCTCACTGATCAGGAGGTGACAGAATCTGCTGAGTGGNCTGATGGGGTA                                                          ]




>consensus_7777#1
CCGCCCACGCGTCCGCGATCCGGCAGCGGCAGTATGCTTTACAAAGAGCGATCAGTGCAA
TAGATTCTTTACAAAGCACATTCATAGTGAGCAGTGAAAGAAGGGAGGAGCGTTTGTTCT
TTATTAACATAACATTTCATCCTTGAAAGATAAACATTTTACCCAGTTTCGATGCAGATC
TCAAACATATTTGTTAGCAGCATTGGGATTACCCTCGTTTGTCTAATCGTTTCTACGCAC
GGGTACAGGGCTACTACAGCGCGCGAAATGATTACCCAAAACCTGTGCGTTTGTCCGTGC
GGCAATCCAAGAGGAGGAAAGCTGTACACCACGCCAAATTTACGATTGAATTGGTTCGAT
GCCGTGTCCTACTGCAGCTCGATCGGAATGTCGATCGCTACGATAAAGGATACCAACGAG
CGCCAATTATTGCAGCTTCATCTGGACGGAGATCGAAGACTGACACGATCGCAGAAAAGA
AGCAAAATACCGTACTGGATCGGAGCGAATAGTTTGATCGCCGGACAGGGGCTTCGATGG
GGTCTCACTGATCAGGAGGTGAAAGAATCTGCTGAGTGGGCTGATGGGGTAGCGCCGGCC
AATAATAGAGTGGAGCCATTCTGTGGTTATATACAGGGCTCTACAATGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7777#0      ------------------------------------------------------------
consensus_7777#1      CCGCCCACGCGTCCGCGATCCGGCAGCGGCAGTATGCTTTACAAAGAGCGATCAGTGCAA 60
                                                                                  

consensus_7777#0      ---------------GCAGAATCGCA-CGAG--GTGAAAGAAGGGAGGAGCGTTTGTTCT 42
consensus_7777#1      TAGATTCTTTACAAAGCACATTCATAGTGAGCAGTGAAAGAAGGGAGGAGCGTTTGTTCT 120
                                     *** * **  *  ***  ***************************

consensus_7777#0      TTATTAACATAACATTTCATCCTTGAAAGATAAACATTTTACCCAGTTTCGATGCAGATC 102
consensus_7777#1      TTATTAACATAACATTTCATCCTTGAAAGATAAACATTTTACCCAGTTTCGATGCAGATC 180
                      ************************************************************

consensus_7777#0      TCAAACATATTTGTTAGCAGCATTGGGATTACCCTTGTTTTGTCTAATCGTTTCTACGCA 162
consensus_7777#1      TCAAACATATTTGTTAGCAGCATTGGGATTACCCTCGTTT-GTCTAATCGTTTCTACGCA 239
                      *********************************** **** *******************

consensus_7777#0      CGGGTACAGGGCTACTACAGCGCGCGAAATGATTACCCAAAACCTGTGCGTTTGTCCGTG 222
consensus_7777#1      CGGGTACAGGGCTACTACAGCGCGCGAAATGATTACCCAAAACCTGTGCGTTTGTCCGTG 299
                      ************************************************************

consensus_7777#0      CGGCAATCCAAGAGGAGGAAAGCTGTACACCACGCCAAATTTACGATTGAATTGGTTCGA 282
consensus_7777#1      CGGCAATCCAAGAGGAGGAAAGCTGTACACCACGCCAAATTTACGATTGAATTGGTTCGA 359
                      ************************************************************

consensus_7777#0      TGCCGTGTCCTACTGCAGCTCGATCGGAATGTCGATCGCTACGATAAAGGATACCAACGA 342
consensus_7777#1      TGCCGTGTCCTACTGCAGCTCGATCGGAATGTCGATCGCTACGATAAAGGATACCAACGA 419
                      ************************************************************

consensus_7777#0      GCGCCAATTATTGCAGCTTCATCTGGACGGAGATCGAAGACTGACACGATCGCAGAAAAG 402
consensus_7777#1      GCGCCAATTATTGCAGCTTCATCTGGACGGAGATCGAAGACTGACACGATCGCAGAAAAG 479
                      ************************************************************

consensus_7777#0      AAGCAAAATACCGTACTGGATCGGAGCGAATAGTTTGATCGCCGGACAGGGGCTTCGATG 462
consensus_7777#1      AAGCAAAATACCGTACTGGATCGGAGCGAATAGTTTGATCGCCGGACAGGGGCTTCGATG 539
                      ************************************************************

consensus_7777#0      GGGTCTCACTGATCAGGAGGTGAAAGAATCTGCTGAGTGGGCTGATGGGGTAGCGCCGGC 522
consensus_7777#1      GGGTCTCACTGATCAGGAGGTGAAAGAATCTGCTGAGTGGGCTGATGGGGTAGCGCCGGC 599
                      ************************************************************

consensus_7777#0      CAATAATAGAGTGGAGCCATTCTGTGTTTATATACAGGGCTCTACAATGAGCTGGGTTGC 582
consensus_7777#1      CAATAATAGAGTGGAGCCATTCTGTGGTTATATACAGGGCTCTACAATGA---------- 649
                      ************************** ***********************          

consensus_7777#0      GACTTCTTGCGATGATGAACCGAGACAATTTATTTGTGAATATTAGAAGATTAATGGGAC 642
consensus_7777#1      ------------------------------------------------------------
                                                                                  

consensus_7777#0      CAATGCATAGCATTGAAAATAAACTCCTCGAATGTTTCTACCGAGAAAACGCAGAAAACA 702
consensus_7777#1      ------------------------------------------------------------
                                                                                  

consensus_7777#0      AGAGANAGAGGGNGGGAAACAGGGGCTNTTT 733
consensus_7777#1      -------------------------------